Query 003029
Match_columns 856
No_of_seqs 480 out of 3072
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 15:37:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03064 alpha,alpha-trehalose 100.0 6E-169 1E-173 1508.6 88.5 807 1-812 1-811 (934)
2 PLN02205 alpha,alpha-trehalose 100.0 7E-154 1E-158 1388.7 81.0 730 93-845 59-848 (854)
3 PLN03063 alpha,alpha-trehalose 100.0 3E-151 7E-156 1367.2 85.2 743 93-844 10-786 (797)
4 PRK14501 putative bifunctional 100.0 2E-140 4E-145 1276.0 81.4 718 94-843 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 5E-117 1E-121 1036.6 60.9 711 93-839 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 4E-114 8E-119 973.0 48.8 451 94-565 2-457 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 9E-113 2E-117 972.3 50.5 454 99-561 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 6E-113 1E-117 976.1 39.3 462 95-561 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 2E-108 5E-113 920.0 49.1 463 90-562 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 5E-104 1E-108 905.9 52.3 452 95-560 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 8.1E-95 1.8E-99 835.4 51.1 456 95-559 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 1.4E-35 3E-40 358.1 50.2 524 232-806 311-990 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 3.2E-36 7E-41 317.5 23.7 250 576-846 3-256 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 1.8E-36 3.9E-41 320.3 12.5 222 595-832 1-235 (235)
15 PLN02580 trehalose-phosphatase 100.0 8.5E-34 1.8E-38 313.2 26.6 242 583-846 111-381 (384)
16 PLN02151 trehalose-phosphatase 100.0 9.4E-34 2E-38 309.3 24.3 239 586-846 93-349 (354)
17 PLN03017 trehalose-phosphatase 100.0 2.1E-33 4.5E-38 307.4 27.0 249 577-847 97-364 (366)
18 TIGR00685 T6PP trehalose-phosp 100.0 7.7E-33 1.7E-37 294.2 23.8 230 589-842 1-243 (244)
19 PRK10187 trehalose-6-phosphate 100.0 2.4E-32 5.2E-37 293.6 25.5 232 591-847 14-249 (266)
20 PLN02939 transferase, transfer 99.9 5.8E-25 1.2E-29 262.6 34.9 321 211-563 590-968 (977)
21 cd03792 GT1_Trehalose_phosphor 99.9 1.2E-25 2.6E-30 253.2 27.5 300 210-561 65-371 (372)
22 PRK15484 lipopolysaccharide 1, 99.9 1.2E-24 2.6E-29 246.4 34.3 273 230-562 98-378 (380)
23 PRK00654 glgA glycogen synthas 99.9 6.8E-25 1.5E-29 254.8 31.8 296 231-562 118-463 (466)
24 PLN02316 synthase/transferase 99.9 1.6E-24 3.4E-29 263.5 35.8 310 211-563 689-1035(1036)
25 TIGR02472 sucr_P_syn_N sucrose 99.9 5.5E-25 1.2E-29 253.8 30.4 312 216-559 99-438 (439)
26 PRK14098 glycogen synthase; Pr 99.9 2.2E-24 4.7E-29 251.2 31.6 322 207-562 117-486 (489)
27 TIGR02095 glgA glycogen/starch 99.9 1.9E-24 4.1E-29 251.6 30.6 310 216-561 113-472 (473)
28 PRK15427 colanic acid biosynth 99.9 4.6E-24 9.9E-29 243.6 32.6 277 231-561 118-405 (406)
29 PRK14099 glycogen synthase; Pr 99.9 7.3E-24 1.6E-28 246.5 32.1 296 231-563 133-480 (485)
30 TIGR03449 mycothiol_MshA UDP-N 99.9 2.9E-23 6.2E-28 236.3 34.0 289 231-562 101-402 (405)
31 cd03818 GT1_ExpC_like This fam 99.9 8.6E-24 1.9E-28 240.4 28.0 284 231-556 87-395 (396)
32 TIGR02470 sucr_synth sucrose s 99.9 1.1E-22 2.4E-27 242.5 35.3 331 211-559 364-745 (784)
33 cd03791 GT1_Glycogen_synthase_ 99.9 5.4E-23 1.2E-27 239.4 31.5 312 212-559 110-474 (476)
34 PLN02871 UDP-sulfoquinovose:DA 99.9 1.3E-22 2.8E-27 235.8 30.8 278 231-563 144-436 (465)
35 PLN00142 sucrose synthase 99.9 2.2E-22 4.7E-27 240.0 33.2 330 211-559 387-768 (815)
36 cd03796 GT1_PIG-A_like This fa 99.9 3.6E-22 7.9E-27 227.3 31.7 297 231-590 88-388 (398)
37 TIGR02149 glgA_Coryne glycogen 99.9 4E-22 8.7E-27 225.0 31.0 287 231-562 83-387 (388)
38 cd03813 GT1_like_3 This family 99.9 2.7E-22 5.8E-27 233.7 29.6 283 224-557 166-472 (475)
39 cd03800 GT1_Sucrose_synthase T 99.9 8.3E-22 1.8E-26 222.2 32.2 295 223-556 93-397 (398)
40 TIGR03088 stp2 sugar transfera 99.9 9.2E-22 2E-26 221.4 31.2 232 287-561 136-372 (374)
41 cd05844 GT1_like_7 Glycosyltra 99.9 2.2E-21 4.8E-26 216.7 30.8 275 225-556 77-365 (367)
42 TIGR01484 HAD-SF-IIB HAD-super 99.9 5.4E-23 1.2E-27 212.5 16.2 192 593-811 1-198 (204)
43 PRK15490 Vi polysaccharide bio 99.9 4.6E-21 1E-25 219.7 31.9 291 224-561 274-575 (578)
44 cd03805 GT1_ALG2_like This fam 99.9 4.2E-21 9E-26 217.0 31.1 283 230-554 93-391 (392)
45 cd04951 GT1_WbdM_like This fam 99.9 4.5E-21 9.7E-26 212.7 30.4 281 226-560 75-359 (360)
46 cd03806 GT1_ALG11_like This fa 99.9 4E-21 8.7E-26 220.3 30.9 273 232-550 108-415 (419)
47 COG0561 Cof Predicted hydrolas 99.9 2.3E-22 5E-27 216.3 19.3 201 590-823 2-233 (264)
48 PLN02949 transferase, transfer 99.9 9.9E-21 2.1E-25 218.6 33.2 284 233-563 140-458 (463)
49 cd04962 GT1_like_5 This family 99.9 1.4E-20 3.1E-25 210.5 32.5 277 231-561 84-370 (371)
50 PRK15179 Vi polysaccharide bio 99.9 7E-21 1.5E-25 227.4 30.3 280 231-559 400-691 (694)
51 TIGR02918 accessory Sec system 99.9 1.6E-20 3.4E-25 218.9 32.5 274 229-560 209-498 (500)
52 PRK10307 putative glycosyl tra 99.9 1.3E-20 2.9E-25 215.3 30.8 285 230-563 105-409 (412)
53 cd03819 GT1_WavL_like This fam 99.9 1.7E-20 3.7E-25 208.1 28.8 266 231-546 78-349 (355)
54 PRK15126 thiamin pyrimidine py 99.9 2.5E-21 5.4E-26 209.2 20.6 217 591-842 2-262 (272)
55 cd03812 GT1_CapH_like This fam 99.9 2E-20 4.3E-25 207.8 27.4 251 231-531 80-335 (358)
56 cd03809 GT1_mtfB_like This fam 99.9 1.2E-20 2.5E-25 208.8 25.0 276 230-556 84-364 (365)
57 cd04946 GT1_AmsK_like This fam 99.9 8.2E-20 1.8E-24 208.7 32.3 272 231-556 127-406 (407)
58 cd03793 GT1_Glycogen_synthase_ 99.9 6.2E-20 1.4E-24 210.5 29.8 307 230-562 147-587 (590)
59 PRK10513 sugar phosphate phosp 99.9 7.7E-21 1.7E-25 205.0 21.3 218 590-842 2-268 (270)
60 cd03821 GT1_Bme6_like This fam 99.9 5.5E-20 1.2E-24 202.7 28.3 278 229-556 85-374 (375)
61 cd03822 GT1_ecORF704_like This 99.9 5.2E-20 1.1E-24 203.6 28.0 280 231-559 76-365 (366)
62 cd04949 GT1_gtfA_like This fam 99.9 3.2E-20 6.9E-25 208.6 26.7 275 221-554 90-371 (372)
63 PRK10976 putative hydrolase; P 99.9 8.5E-21 1.9E-25 204.3 20.0 219 591-842 2-264 (266)
64 PRK10125 putative glycosyl tra 99.9 5.3E-20 1.1E-24 209.9 27.5 187 326-560 212-403 (405)
65 PRK03669 mannosyl-3-phosphogly 99.9 1.3E-20 2.7E-25 203.7 20.5 213 590-843 6-269 (271)
66 PRK01158 phosphoglycolate phos 99.9 1.9E-20 4.1E-25 197.0 20.8 208 590-842 2-229 (230)
67 cd03799 GT1_amsK_like This is 99.9 2.9E-19 6.2E-24 197.9 30.9 266 231-553 79-353 (355)
68 cd03801 GT1_YqgM_like This fam 99.9 2.9E-19 6.2E-24 195.2 30.2 279 231-559 85-373 (374)
69 cd03807 GT1_WbnK_like This fam 99.9 2.2E-19 4.9E-24 197.0 29.3 279 231-559 80-364 (365)
70 cd03817 GT1_UGDG_like This fam 99.9 2.8E-19 6.1E-24 197.3 29.5 272 231-558 84-370 (374)
71 cd03794 GT1_wbuB_like This fam 99.8 4.1E-19 8.9E-24 196.5 29.9 280 229-556 97-394 (394)
72 PTZ00174 phosphomannomutase; P 99.8 7.7E-20 1.7E-24 194.9 23.0 204 589-819 3-231 (247)
73 PRK09922 UDP-D-galactose:(gluc 99.8 2.6E-19 5.6E-24 201.1 28.1 268 225-560 79-354 (359)
74 cd03798 GT1_wlbH_like This fam 99.8 6.4E-19 1.4E-23 193.4 29.4 282 230-561 92-376 (377)
75 cd03814 GT1_like_2 This family 99.8 2.9E-19 6.4E-24 197.2 26.8 272 231-559 83-363 (364)
76 PF08282 Hydrolase_3: haloacid 99.8 5.6E-20 1.2E-24 194.1 19.6 192 594-824 1-231 (254)
77 cd03820 GT1_amsD_like This fam 99.8 4.6E-19 1E-23 192.9 26.6 262 231-556 83-347 (348)
78 PHA01633 putative glycosyl tra 99.8 1E-19 2.3E-24 200.4 20.7 195 331-556 118-334 (335)
79 TIGR03087 stp1 sugar transfera 99.8 9E-19 2E-23 199.4 28.7 280 219-560 90-395 (397)
80 PLN02887 hydrolase family prot 99.8 1.1E-19 2.4E-24 212.6 21.2 225 582-842 300-579 (580)
81 cd03823 GT1_ExpE7_like This fa 99.8 2.7E-18 5.8E-23 188.9 30.0 258 231-558 96-356 (359)
82 PLN02423 phosphomannomutase 99.8 3E-19 6.6E-24 189.9 21.7 213 591-842 7-244 (245)
83 PLN02846 digalactosyldiacylgly 99.8 1.2E-18 2.6E-23 199.1 27.6 186 331-562 201-392 (462)
84 PLN02501 digalactosyldiacylgly 99.8 1.5E-18 3.2E-23 200.9 28.3 264 231-559 434-707 (794)
85 cd03816 GT1_ALG1_like This fam 99.8 1.4E-18 3E-23 199.2 27.5 271 230-545 94-401 (415)
86 PRK10530 pyridoxal phosphate ( 99.8 3.3E-19 7.2E-24 192.3 21.1 216 590-842 2-271 (272)
87 PHA01630 putative group 1 glyc 99.8 1.5E-18 3.3E-23 192.5 26.7 214 287-561 94-330 (331)
88 cd03808 GT1_cap1E_like This fa 99.8 3E-18 6.5E-23 187.3 28.3 273 231-556 80-358 (359)
89 cd03795 GT1_like_4 This family 99.8 3.6E-18 7.8E-23 189.2 29.0 262 230-545 82-349 (357)
90 TIGR01482 SPP-subfamily Sucros 99.8 3.7E-19 7.9E-24 186.5 17.7 188 594-823 1-193 (225)
91 TIGR01485 SPP_plant-cyano sucr 99.8 2.2E-19 4.7E-24 191.7 15.8 201 591-823 1-212 (249)
92 cd03802 GT1_AviGT4_like This f 99.8 5.9E-18 1.3E-22 186.2 27.4 242 231-557 87-332 (335)
93 TIGR00099 Cof-subfamily Cof su 99.8 1.1E-18 2.4E-23 186.9 18.7 197 593-823 1-232 (256)
94 cd04955 GT1_like_6 This family 99.8 1.4E-17 3E-22 185.2 27.6 268 231-559 84-362 (363)
95 cd03804 GT1_wbaZ_like This fam 99.8 9.2E-18 2E-22 187.3 26.1 248 230-554 82-349 (351)
96 TIGR02463 MPGP_rel mannosyl-3- 99.8 1.4E-18 3E-23 181.9 17.6 188 593-820 1-220 (221)
97 TIGR01487 SPP-like sucrose-pho 99.8 2.3E-18 5E-23 179.6 18.1 189 591-823 1-191 (215)
98 cd03811 GT1_WabH_like This fam 99.8 1.6E-17 3.5E-22 180.8 24.9 246 231-527 81-332 (353)
99 TIGR01486 HAD-SF-IIB-MPGP mann 99.8 3.7E-18 8E-23 182.9 18.8 192 593-824 1-223 (256)
100 cd03825 GT1_wcfI_like This fam 99.8 3.8E-17 8.2E-22 181.6 25.9 196 326-561 159-364 (365)
101 TIGR02471 sucr_syn_bact_C sucr 99.8 4.3E-18 9.4E-23 180.2 17.4 191 593-823 1-203 (236)
102 PLN02275 transferase, transfer 99.8 6.4E-17 1.4E-21 182.7 26.0 242 230-525 99-371 (371)
103 PRK00192 mannosyl-3-phosphogly 99.8 2.3E-17 5E-22 178.5 18.9 197 590-823 3-235 (273)
104 PRK14502 bifunctional mannosyl 99.7 4.5E-17 9.8E-22 189.7 19.0 197 590-823 415-659 (694)
105 PRK12702 mannosyl-3-phosphogly 99.7 1E-16 2.3E-21 170.1 19.7 194 591-822 1-253 (302)
106 PLN02382 probable sucrose-phos 99.7 3.9E-17 8.4E-22 185.8 16.8 203 587-823 5-223 (413)
107 COG0297 GlgA Glycogen synthase 99.7 9E-16 2E-20 175.7 27.9 299 231-562 130-478 (487)
108 PRK05749 3-deoxy-D-manno-octul 99.7 1.6E-15 3.5E-20 174.3 28.2 285 223-560 117-418 (425)
109 TIGR02461 osmo_MPG_phos mannos 99.7 4.2E-17 9.2E-22 171.3 13.2 192 593-820 1-224 (225)
110 PF00534 Glycos_transf_1: Glyc 99.7 1.9E-16 4.2E-21 158.2 15.6 156 361-541 13-171 (172)
111 PF05116 S6PP: Sucrose-6F-phos 99.6 5.6E-16 1.2E-20 165.1 10.9 196 591-823 2-209 (247)
112 KOG1111 N-acetylglucosaminyltr 99.6 1.8E-14 3.9E-19 153.5 17.3 168 324-527 167-335 (426)
113 cd04950 GT1_like_1 Glycosyltra 99.6 2.3E-13 4.9E-18 154.0 25.6 264 231-561 102-371 (373)
114 PLN02605 monogalactosyldiacylg 99.5 2E-12 4.3E-17 146.8 28.3 217 287-558 150-378 (382)
115 KOG0853 Glycosyltransferase [C 99.4 7.3E-12 1.6E-16 141.9 22.2 249 283-562 205-464 (495)
116 COG0438 RfaG Glycosyltransfera 99.4 2.6E-11 5.6E-16 130.5 22.3 198 327-561 173-376 (381)
117 PRK13609 diacylglycerol glucos 99.4 1.2E-10 2.6E-15 131.9 27.8 269 223-564 97-374 (380)
118 cd03785 GT1_MurG MurG is an N- 99.3 1.2E-10 2.6E-15 129.9 22.7 245 225-548 84-344 (350)
119 PRK00726 murG undecaprenyldiph 99.3 8.7E-11 1.9E-15 131.8 21.4 252 231-560 91-356 (357)
120 cd01635 Glycosyltransferase_GT 99.3 5.8E-11 1.3E-15 122.0 18.2 118 368-509 109-229 (229)
121 COG3769 Predicted hydrolase (H 99.3 2.4E-11 5.2E-16 121.7 13.4 194 590-819 6-235 (274)
122 KOG1387 Glycosyltransferase [C 99.3 1.1E-09 2.3E-14 116.6 26.0 310 211-562 126-459 (465)
123 TIGR01133 murG undecaprenyldip 99.3 2.2E-10 4.9E-15 127.5 20.1 181 329-553 153-346 (348)
124 TIGR00236 wecB UDP-N-acetylglu 99.2 1.1E-09 2.4E-14 123.3 23.8 252 227-535 83-341 (365)
125 TIGR02094 more_P_ylases alpha- 99.2 8.1E-09 1.8E-13 122.7 31.3 182 362-558 388-597 (601)
126 PRK13608 diacylglycerol glucos 99.2 2.2E-09 4.8E-14 122.3 25.7 266 225-563 99-373 (391)
127 cd03786 GT1_UDP-GlcNAc_2-Epime 99.2 1.9E-09 4.1E-14 120.9 23.6 244 231-529 88-339 (363)
128 TIGR03713 acc_sec_asp1 accesso 99.1 1.6E-08 3.5E-13 118.6 25.5 261 229-548 222-508 (519)
129 PRK09814 beta-1,6-galactofuran 99.1 1.8E-08 3.8E-13 112.4 24.6 240 225-545 58-315 (333)
130 PF13692 Glyco_trans_1_4: Glyc 99.1 6.2E-10 1.3E-14 106.6 10.2 130 363-527 2-135 (135)
131 PRK00025 lpxB lipid-A-disaccha 99.0 2.5E-08 5.4E-13 112.8 23.9 150 356-539 176-352 (380)
132 KOG3189 Phosphomannomutase [Li 99.0 1.4E-08 3E-13 100.5 17.5 220 585-843 5-251 (252)
133 PF05693 Glycogen_syn: Glycoge 98.9 5.7E-07 1.2E-11 104.0 28.1 305 234-562 146-582 (633)
134 cd04299 GT1_Glycogen_Phosphory 98.9 6.7E-07 1.5E-11 108.5 30.2 182 364-560 479-688 (778)
135 PF03332 PMM: Eukaryotic phosp 98.8 2.1E-08 4.6E-13 102.5 10.4 193 627-843 1-220 (220)
136 cd01427 HAD_like Haloacid deha 98.6 7.9E-08 1.7E-12 90.9 6.7 63 593-662 1-63 (139)
137 TIGR00215 lpxB lipid-A-disacch 98.5 1.3E-05 2.8E-10 91.4 24.2 135 362-528 190-348 (385)
138 PF13524 Glyco_trans_1_2: Glyc 98.5 4.8E-07 1E-11 81.1 9.8 88 462-556 1-91 (92)
139 TIGR02919 accessory Sec system 98.4 5.3E-05 1.2E-09 87.3 23.8 136 379-544 291-427 (438)
140 TIGR01670 YrbI-phosphatas 3-de 98.3 1.7E-06 3.7E-11 85.6 9.1 66 768-844 76-151 (154)
141 smart00775 LNS2 LNS2 domain. T 98.3 1E-06 2.2E-11 87.5 6.4 77 593-673 1-88 (157)
142 PRK09484 3-deoxy-D-manno-octul 98.3 2.9E-06 6.3E-11 86.5 8.6 43 769-822 97-139 (183)
143 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00098 2.1E-08 74.7 28.4 309 215-559 32-415 (419)
144 TIGR01689 EcbF-BcbF capsule bi 98.0 1.1E-05 2.4E-10 76.7 6.5 54 592-654 2-55 (126)
145 TIGR01684 viral_ppase viral ph 97.9 2.6E-05 5.6E-10 83.7 7.2 72 590-674 125-201 (301)
146 PRK11133 serB phosphoserine ph 97.7 8.5E-06 1.8E-10 90.2 0.2 45 766-821 246-290 (322)
147 COG0560 SerB Phosphoserine pho 97.7 0.00021 4.5E-09 74.6 10.4 51 762-823 138-188 (212)
148 TIGR02726 phenyl_P_delta pheny 97.7 0.00024 5.2E-09 71.4 10.3 141 590-843 6-156 (169)
149 PHA03398 viral phosphatase sup 97.5 0.00019 4.1E-09 77.3 7.2 71 590-673 127-202 (303)
150 TIGR00338 serB phosphoserine p 97.4 0.0018 3.8E-08 67.6 12.6 45 768-823 152-196 (219)
151 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.3 0.0023 5.1E-08 65.4 12.3 46 768-824 147-192 (201)
152 PLN02954 phosphoserine phospha 97.1 0.0042 9.1E-08 65.0 12.1 62 765-837 152-222 (224)
153 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.1 0.00053 1.1E-08 73.4 5.1 66 591-672 1-74 (249)
154 TIGR01662 HAD-SF-IIIA HAD-supe 97.1 0.00085 1.8E-08 64.2 5.5 64 592-662 1-72 (132)
155 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.8 0.0009 1.9E-08 72.0 3.8 55 592-658 2-56 (257)
156 PRK10444 UMP phosphatase; Prov 96.8 0.00095 2E-08 71.4 4.0 54 591-660 1-54 (248)
157 KOG2941 Beta-1,4-mannosyltrans 96.8 0.12 2.6E-06 56.5 19.0 165 362-557 254-434 (444)
158 TIGR01681 HAD-SF-IIIC HAD-supe 96.7 0.0024 5.1E-08 61.2 5.7 65 592-659 1-66 (128)
159 PLN02645 phosphoglycolate phos 96.7 0.0014 3.1E-08 72.5 4.0 55 590-660 27-81 (311)
160 TIGR01452 PGP_euk phosphoglyco 96.5 0.002 4.3E-08 70.2 4.0 52 591-658 2-53 (279)
161 TIGR01672 AphA HAD superfamily 96.5 0.0063 1.4E-07 64.5 7.5 84 577-662 49-157 (237)
162 PRK13225 phosphoglycolate phos 96.2 0.012 2.5E-07 64.1 7.8 65 768-842 196-271 (273)
163 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.0095 2.1E-07 59.8 5.5 57 590-650 12-69 (166)
164 COG0763 LpxB Lipid A disacchar 96.0 0.32 6.8E-06 54.5 17.6 152 362-546 188-365 (381)
165 COG1778 Low specificity phosph 96.0 0.0097 2.1E-07 57.9 5.0 70 588-662 5-74 (170)
166 COG2179 Predicted hydrolase of 96.0 0.023 5.1E-07 56.0 7.7 65 587-665 24-88 (175)
167 PF08323 Glyco_transf_5: Starc 95.9 0.035 7.6E-07 59.3 9.3 93 212-304 114-232 (245)
168 TIGR01656 Histidinol-ppas hist 95.8 0.013 2.8E-07 57.4 5.2 54 592-650 1-54 (147)
169 PF13439 Glyco_transf_4: Glyco 95.6 0.031 6.8E-07 54.7 7.1 92 231-341 80-177 (177)
170 PRK13223 phosphoglycolate phos 95.6 0.049 1.1E-06 59.2 9.1 65 764-838 154-229 (272)
171 PF13844 Glyco_transf_41: Glyc 95.4 0.5 1.1E-05 54.9 16.8 203 331-562 248-467 (468)
172 TIGR01668 YqeG_hyp_ppase HAD s 95.4 0.045 9.7E-07 55.1 7.4 60 589-662 23-83 (170)
173 PRK11009 aphA acid phosphatase 95.3 0.045 9.8E-07 58.1 7.4 72 577-650 49-141 (237)
174 PF02684 LpxB: Lipid-A-disacch 95.2 2.8 6E-05 47.7 21.8 129 369-529 192-342 (373)
175 PF13344 Hydrolase_6: Haloacid 95.1 0.011 2.4E-07 54.1 1.9 54 594-663 1-57 (101)
176 TIGR00213 GmhB_yaeD D,D-heptos 95.0 0.024 5.2E-07 57.2 4.2 52 592-650 2-53 (176)
177 PF07429 Glyco_transf_56: 4-al 94.8 3.5 7.5E-05 45.9 20.2 167 326-526 160-332 (360)
178 COG0546 Gph Predicted phosphat 94.7 0.11 2.4E-06 54.4 8.4 63 770-840 148-219 (220)
179 PF08645 PNK3P: Polynucleotide 94.7 0.032 7E-07 55.5 4.0 53 592-647 1-53 (159)
180 PTZ00445 p36-lilke protein; Pr 94.6 0.096 2.1E-06 54.0 7.4 71 578-652 30-104 (219)
181 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.5 0.055 1.2E-06 57.6 5.6 56 590-661 7-64 (242)
182 PRK08942 D,D-heptose 1,7-bisph 94.3 0.066 1.4E-06 54.2 5.5 53 591-649 3-55 (181)
183 PF09419 PGP_phosphatase: Mito 94.3 0.12 2.6E-06 51.8 7.2 65 586-663 36-108 (168)
184 TIGR03568 NeuC_NnaA UDP-N-acet 94.3 5.5 0.00012 45.2 21.4 73 441-526 264-338 (365)
185 PHA02530 pseT polynucleotide k 94.3 0.078 1.7E-06 58.2 6.3 68 590-660 157-224 (300)
186 TIGR01261 hisB_Nterm histidino 94.2 0.081 1.8E-06 52.8 5.6 53 592-648 2-54 (161)
187 TIGR03492 conserved hypothetic 94.2 1.4 2.9E-05 50.7 16.3 138 365-528 209-365 (396)
188 PF02350 Epimerase_2: UDP-N-ac 94.1 6.7 0.00015 44.2 21.6 243 231-527 67-318 (346)
189 TIGR01460 HAD-SF-IIA Haloacid 94.1 0.067 1.5E-06 56.8 5.2 50 594-659 1-53 (236)
190 PF06437 ISN1: IMP-specific 5' 93.8 2.8 6E-05 46.9 16.9 198 577-801 133-379 (408)
191 PRK06769 hypothetical protein; 93.7 0.066 1.4E-06 54.0 4.1 53 589-649 2-54 (173)
192 PF13579 Glyco_trans_4_4: Glyc 93.7 0.11 2.5E-06 49.7 5.6 84 230-334 72-160 (160)
193 TIGR01675 plant-AP plant acid 93.3 0.091 2E-06 55.3 4.4 70 590-660 76-160 (229)
194 PF12710 HAD: haloacid dehalog 93.3 0.17 3.7E-06 51.1 6.4 37 625-662 92-128 (192)
195 PRK13288 pyrophosphatase PpaX; 93.0 0.18 3.8E-06 52.4 6.0 61 769-839 140-211 (214)
196 PRK05446 imidazole glycerol-ph 93.0 0.18 3.9E-06 56.7 6.3 55 590-648 1-55 (354)
197 COG0707 MurG UDP-N-acetylgluco 92.9 8.9 0.00019 43.4 19.8 87 451-546 244-342 (357)
198 PRK13582 thrH phosphoserine ph 92.7 0.18 4E-06 51.7 5.7 49 790-843 144-200 (205)
199 PRK09552 mtnX 2-hydroxy-3-keto 92.6 0.1 2.3E-06 54.5 3.7 62 766-842 146-216 (219)
200 TIGR01685 MDP-1 magnesium-depe 92.4 0.25 5.3E-06 50.0 5.9 70 591-661 2-84 (174)
201 TIGR01663 PNK-3'Pase polynucle 92.4 0.23 5E-06 58.7 6.4 71 589-662 166-248 (526)
202 TIGR01533 lipo_e_P4 5'-nucleot 92.3 0.26 5.6E-06 53.3 6.2 73 589-662 73-160 (266)
203 smart00577 CPDc catalytic doma 92.1 0.32 7E-06 47.7 6.1 70 590-661 1-82 (148)
204 TIGR01488 HAD-SF-IB Haloacid D 91.9 0.25 5.5E-06 49.2 5.4 40 764-811 138-177 (177)
205 TIGR01488 HAD-SF-IB Haloacid D 91.9 0.092 2E-06 52.4 2.1 36 625-661 76-111 (177)
206 PLN03243 haloacid dehalogenase 91.7 0.42 9.1E-06 51.6 7.1 57 772-839 170-235 (260)
207 cd03784 GT1_Gtf_like This fami 91.7 22 0.00048 40.3 21.6 72 444-526 292-371 (401)
208 COG1778 Low specificity phosph 91.4 0.076 1.6E-06 51.9 0.8 46 767-823 82-127 (170)
209 PF03767 Acid_phosphat_B: HAD 91.3 0.022 4.7E-07 60.3 -3.3 84 590-674 71-167 (229)
210 TIGR03351 PhnX-like phosphonat 91.2 0.17 3.8E-06 52.6 3.4 41 769-820 147-190 (220)
211 PF08235 LNS2: LNS2 (Lipin/Ned 91.1 0.32 6.8E-06 48.2 4.8 63 593-660 1-67 (157)
212 PRK10826 2-deoxyglucose-6-phos 91.0 0.41 8.9E-06 50.0 6.0 42 771-822 152-193 (222)
213 PRK13222 phosphoglycolate phos 90.7 0.41 8.8E-06 49.8 5.7 61 770-840 152-223 (226)
214 PRK14988 GMP/IMP nucleotidase; 90.7 0.32 6.9E-06 51.1 4.8 62 770-842 152-222 (224)
215 PF00702 Hydrolase: haloacid d 90.2 0.72 1.6E-05 47.2 6.9 40 622-662 127-166 (215)
216 TIGR01680 Veg_Stor_Prot vegeta 90.1 0.34 7.3E-06 52.1 4.4 70 590-660 100-182 (275)
217 KOG0210 P-type ATPase [Inorgan 90.1 3.7 8E-05 49.0 12.9 169 622-838 658-832 (1051)
218 TIGR01525 ATPase-IB_hvy heavy 89.8 0.85 1.8E-05 54.8 8.0 66 585-662 358-424 (556)
219 TIGR01545 YfhB_g-proteo haloac 89.7 0.77 1.7E-05 47.9 6.7 38 622-660 94-132 (210)
220 TIGR01686 FkbH FkbH-like domai 89.7 0.61 1.3E-05 51.8 6.3 65 590-659 2-67 (320)
221 TIGR01426 MGT glycosyltransfer 89.3 12 0.00025 42.6 16.6 99 444-555 279-386 (392)
222 TIGR01489 DKMTPPase-SF 2,3-dik 89.2 0.75 1.6E-05 46.2 6.0 37 764-811 145-181 (188)
223 COG0647 NagD Predicted sugar p 88.8 0.47 1E-05 51.3 4.3 47 590-652 7-53 (269)
224 PRK08238 hypothetical protein; 88.5 0.91 2E-05 53.3 6.8 47 622-669 72-120 (479)
225 COG0637 Predicted phosphatase/ 88.2 0.89 1.9E-05 47.8 5.9 39 622-661 86-124 (221)
226 TIGR03333 salvage_mtnX 2-hydro 88.1 1.1 2.3E-05 46.8 6.3 39 621-660 69-107 (214)
227 KOG1050 Trehalose-6-phosphate 87.6 0.021 4.5E-07 69.5 -7.6 251 576-846 174-466 (732)
228 PLN02575 haloacid dehalogenase 87.5 1.2 2.5E-05 50.7 6.7 23 584-606 124-146 (381)
229 PRK13226 phosphoglycolate phos 87.5 0.93 2E-05 47.7 5.5 61 771-839 155-225 (229)
230 TIGR01456 CECR5 HAD-superfamil 86.9 1.2 2.5E-05 49.7 6.2 52 593-660 2-61 (321)
231 PRK02797 4-alpha-L-fucosyltran 86.6 11 0.00025 41.3 13.2 124 364-509 146-272 (322)
232 TIGR03590 PseG pseudaminic aci 86.5 4.8 0.0001 43.8 10.6 98 362-494 170-267 (279)
233 PF03031 NIF: NLI interacting 86.1 0.71 1.5E-05 45.5 3.6 67 592-660 1-72 (159)
234 PF12689 Acid_PPase: Acid Phos 86.1 1.4 3E-05 44.4 5.6 72 591-663 3-86 (169)
235 TIGR01512 ATPase-IB2_Cd heavy 86.1 3.2 6.9E-05 49.7 9.7 64 587-662 338-402 (536)
236 COG4641 Uncharacterized protei 85.9 4.6 0.0001 45.2 10.0 117 441-562 239-362 (373)
237 TIGR02137 HSK-PSP phosphoserin 85.7 1.1 2.5E-05 46.3 5.0 39 622-662 68-106 (203)
238 PLN02940 riboflavin kinase 85.3 1.4 3E-05 50.3 5.9 36 622-658 93-128 (382)
239 TIGR02250 FCP1_euk FCP1-like p 85.2 1.7 3.6E-05 43.2 5.6 72 588-661 3-95 (156)
240 TIGR01490 HAD-SF-IB-hyp1 HAD-s 84.5 0.85 1.8E-05 46.6 3.4 49 764-823 151-199 (202)
241 PRK10671 copA copper exporting 84.1 2.8 6.1E-05 52.9 8.3 69 582-662 621-689 (834)
242 COG0381 WecB UDP-N-acetylgluco 83.9 84 0.0018 35.8 21.9 136 363-529 205-343 (383)
243 COG0241 HisB Histidinol phosph 83.8 1.1 2.4E-05 45.4 3.8 51 591-648 5-56 (181)
244 PF05152 DUF705: Protein of un 83.2 3.8 8.2E-05 44.2 7.5 61 590-662 121-181 (297)
245 PRK10725 fructose-1-P/6-phosph 83.2 0.66 1.4E-05 46.8 1.9 42 768-820 143-185 (188)
246 PF00343 Phosphorylase: Carboh 82.0 64 0.0014 39.7 18.1 149 362-519 443-603 (713)
247 PF06941 NT5C: 5' nucleotidase 81.3 1.4 3.1E-05 44.9 3.6 30 621-651 72-101 (191)
248 PRK11587 putative phosphatase; 80.6 0.92 2E-05 47.3 1.9 43 769-822 140-183 (218)
249 TIGR02251 HIF-SF_euk Dullard-l 80.4 3.2 6.9E-05 41.4 5.6 69 591-661 1-79 (162)
250 TIGR02245 HAD_IIID1 HAD-superf 79.3 3.3 7.2E-05 42.6 5.4 62 589-660 19-81 (195)
251 PRK14986 glycogen phosphorylas 79.2 44 0.00096 41.7 15.6 150 362-519 542-702 (815)
252 PLN03190 aminophospholipid tra 79.0 18 0.00038 47.4 13.0 38 622-660 726-763 (1178)
253 TIGR01652 ATPase-Plipid phosph 78.7 13 0.00029 48.3 11.8 45 622-669 631-675 (1057)
254 COG4030 Uncharacterized protei 78.1 2.1 4.5E-05 44.4 3.4 49 767-824 190-240 (315)
255 PLN02779 haloacid dehalogenase 77.8 1.3 2.9E-05 48.4 2.1 41 769-820 204-245 (286)
256 PRK13222 phosphoglycolate phos 77.5 2.6 5.5E-05 43.8 4.1 17 589-605 4-20 (226)
257 PLN02770 haloacid dehalogenase 77.5 1.3 2.8E-05 47.3 1.9 57 768-835 165-232 (248)
258 KOG2116 Protein involved in pl 77.4 2.8 6.1E-05 49.7 4.6 83 590-677 529-616 (738)
259 PF06888 Put_Phosphatase: Puta 77.0 5.4 0.00012 42.4 6.3 44 764-812 146-189 (234)
260 PRK14089 ipid-A-disaccharide s 76.9 1.4E+02 0.003 33.8 20.5 32 453-493 229-260 (347)
261 TIGR02252 DREG-2 REG-2-like, H 76.2 1.6 3.5E-05 44.6 2.1 30 770-806 163-193 (203)
262 PRK01021 lpxB lipid-A-disaccha 76.2 1.9E+02 0.0041 35.1 21.9 66 454-529 483-573 (608)
263 KOG1615 Phosphoserine phosphat 76.1 3.9 8.4E-05 41.7 4.6 44 620-664 86-129 (227)
264 PRK13582 thrH phosphoserine ph 76.0 4 8.7E-05 41.7 5.0 14 591-604 1-14 (205)
265 KOG0206 P-type ATPase [General 76.0 18 0.00039 46.6 11.4 49 758-820 771-819 (1151)
266 TIGR02009 PGMB-YQAB-SF beta-ph 75.6 1.5 3.3E-05 43.9 1.7 31 769-806 144-174 (185)
267 PHA02597 30.2 hypothetical pro 74.5 1.5 3.3E-05 44.7 1.4 55 768-835 131-195 (197)
268 COG0058 GlgP Glucan phosphoryl 74.2 1.3E+02 0.0028 37.3 17.5 137 362-511 486-630 (750)
269 TIGR01548 HAD-SF-IA-hyp1 haloa 74.0 1.5 3.2E-05 44.8 1.2 31 769-806 163-193 (197)
270 PRK11590 hypothetical protein; 73.9 1.8 3.8E-05 45.0 1.7 47 764-824 159-205 (211)
271 TIGR01116 ATPase-IIA1_Ca sarco 73.7 19 0.00041 46.1 11.1 40 622-662 537-576 (917)
272 TIGR02253 CTE7 HAD superfamily 73.5 3.4 7.4E-05 42.7 3.8 42 769-821 152-195 (221)
273 PRK10748 flavin mononucleotide 73.5 2 4.3E-05 45.5 2.0 43 769-822 165-209 (238)
274 cd04300 GT1_Glycogen_Phosphory 73.3 90 0.002 39.0 16.2 150 362-519 529-689 (797)
275 TIGR01422 phosphonatase phosph 72.6 2 4.3E-05 45.8 1.8 42 769-821 158-201 (253)
276 COG3914 Spy Predicted O-linked 72.5 1.4E+02 0.0031 35.7 16.5 109 366-496 431-539 (620)
277 PF12000 Glyco_trans_4_3: Gkyc 71.7 14 0.00031 37.2 7.5 49 211-261 43-94 (171)
278 PRK13226 phosphoglycolate phos 70.9 4.5 9.8E-05 42.5 4.0 15 591-605 12-26 (229)
279 PRK13478 phosphonoacetaldehyde 70.7 2.2 4.8E-05 45.9 1.6 64 769-843 160-259 (267)
280 TIGR02254 YjjG/YfnB HAD superf 70.7 2.5 5.5E-05 43.7 2.0 58 769-837 154-223 (224)
281 TIGR01544 HAD-SF-IE haloacid d 70.2 18 0.0004 39.3 8.5 40 621-661 120-159 (277)
282 PRK10563 6-phosphogluconate ph 69.8 2.6 5.7E-05 43.7 1.9 42 768-820 143-185 (221)
283 COG4359 Uncharacterized conser 68.4 9.2 0.0002 38.7 5.1 39 621-660 72-110 (220)
284 TIGR01990 bPGM beta-phosphoglu 66.7 3.9 8.4E-05 40.9 2.3 29 593-639 1-29 (185)
285 KOG3742 Glycogen synthase [Car 66.5 9.2 0.0002 43.5 5.3 72 452-527 493-578 (692)
286 TIGR02137 HSK-PSP phosphoserin 65.6 8.9 0.00019 39.7 4.8 44 765-823 129-172 (203)
287 COG4087 Soluble P-type ATPase 64.5 6.3 0.00014 37.7 3.0 51 594-661 17-67 (152)
288 COG4087 Soluble P-type ATPase 64.3 10 0.00022 36.4 4.3 51 788-840 91-148 (152)
289 PRK09449 dUMP phosphatase; Pro 63.9 3.6 7.7E-05 42.8 1.5 60 770-839 153-223 (224)
290 PF06888 Put_Phosphatase: Puta 63.5 7.7 0.00017 41.2 3.9 39 623-661 72-111 (234)
291 TIGR01993 Pyr-5-nucltdase pyri 63.4 4.2 9E-05 41.0 1.8 37 769-816 143-179 (184)
292 TIGR02093 P_ylase glycogen/sta 62.1 1.2E+02 0.0026 37.9 14.0 150 362-519 526-686 (794)
293 COG0816 Predicted endonuclease 61.8 39 0.00085 33.0 8.1 72 380-461 40-111 (141)
294 PRK14985 maltodextrin phosphor 60.5 1.2E+02 0.0025 38.0 13.5 150 362-519 528-688 (798)
295 PF06258 Mito_fiss_Elm1: Mitoc 59.2 2.9E+02 0.0062 30.7 17.6 193 231-497 57-259 (311)
296 TIGR01428 HAD_type_II 2-haloal 59.0 5.3 0.00011 40.7 1.7 42 769-821 150-192 (198)
297 COG3882 FkbH Predicted enzyme 58.9 23 0.00051 41.0 6.8 83 578-661 209-293 (574)
298 TIGR01449 PGP_bact 2-phosphogl 58.4 8.2 0.00018 39.6 3.0 59 769-837 143-212 (213)
299 KOG3120 Predicted haloacid deh 58.1 22 0.00047 37.2 5.8 78 763-845 158-250 (256)
300 TIGR02247 HAD-1A3-hyp Epoxide 57.7 5.7 0.00012 40.9 1.7 53 770-841 155-208 (211)
301 COG4996 Predicted phosphatase 57.4 28 0.00062 33.3 6.0 69 592-661 1-79 (164)
302 PRK13288 pyrophosphatase PpaX; 56.5 10 0.00022 39.1 3.3 16 590-605 2-17 (214)
303 TIGR01544 HAD-SF-IE haloacid d 56.4 12 0.00026 40.8 3.9 67 592-659 23-96 (277)
304 TIGR01493 HAD-SF-IA-v2 Haloaci 56.2 5.1 0.00011 39.8 1.0 30 770-806 142-171 (175)
305 PF11019 DUF2608: Protein of u 53.1 33 0.00072 36.9 6.6 46 762-815 156-202 (252)
306 TIGR01489 DKMTPPase-SF 2,3-dik 52.2 14 0.00031 36.8 3.5 38 623-661 73-110 (188)
307 TIGR01454 AHBA_synth_RP 3-amin 51.6 17 0.00038 37.1 4.1 59 769-838 133-203 (205)
308 KOG2884 26S proteasome regulat 51.1 1.8E+02 0.0039 30.4 10.9 47 488-538 186-236 (259)
309 TIGR00661 MJ1255 conserved hyp 50.0 47 0.001 36.7 7.5 73 446-528 235-315 (321)
310 COG1819 Glycosyl transferases, 49.0 3.6E+02 0.0078 31.1 14.7 99 444-556 288-395 (406)
311 TIGR01511 ATPase-IB1_Cu copper 48.9 26 0.00056 42.2 5.6 63 588-662 382-444 (562)
312 COG3660 Predicted nucleoside-d 48.1 1.8E+02 0.0038 31.6 10.6 52 440-498 224-276 (329)
313 COG1011 Predicted hydrolase (H 47.9 11 0.00023 39.1 1.9 17 589-605 2-18 (229)
314 COG5083 SMP2 Uncharacterized p 47.6 11 0.00025 42.7 2.0 79 589-673 373-451 (580)
315 TIGR03333 salvage_mtnX 2-hydro 46.9 13 0.00028 38.6 2.3 60 766-841 142-211 (214)
316 KOG2134 Polynucleotide kinase 46.8 17 0.00038 40.9 3.3 55 590-647 74-128 (422)
317 PF13242 Hydrolase_like: HAD-h 46.7 15 0.00033 31.2 2.3 40 772-822 9-50 (75)
318 PF15024 Glyco_transf_18: Glyc 45.7 75 0.0016 37.9 8.3 82 445-528 327-431 (559)
319 PF12710 HAD: haloacid dehalog 44.9 12 0.00025 37.6 1.5 33 768-809 157-192 (192)
320 PRK10422 lipopolysaccharide co 43.8 5E+02 0.011 28.9 14.9 87 362-467 183-270 (352)
321 PRK14988 GMP/IMP nucleotidase; 43.8 27 0.00059 36.5 4.2 16 590-605 9-24 (224)
322 PRK12446 undecaprenyldiphospho 43.5 3.3E+02 0.0072 30.6 13.1 70 451-528 244-326 (352)
323 TIGR01545 YfhB_g-proteo haloac 43.4 21 0.00046 37.1 3.2 47 765-825 159-205 (210)
324 PF00702 Hydrolase: haloacid d 43.3 12 0.00026 38.0 1.4 32 772-811 183-214 (215)
325 TIGR01497 kdpB K+-transporting 43.0 41 0.00089 41.4 6.0 71 580-662 415-485 (675)
326 PF13528 Glyco_trans_1_3: Glyc 42.9 1.9E+02 0.0041 31.4 10.9 68 448-523 239-316 (318)
327 PF13477 Glyco_trans_4_2: Glyc 42.8 41 0.00089 31.6 4.9 40 224-264 68-108 (139)
328 PRK11033 zntA zinc/cadmium/mer 42.6 48 0.001 41.4 6.7 68 583-662 540-607 (741)
329 KOG1618 Predicted phosphatase 42.5 23 0.0005 38.9 3.3 40 592-646 36-78 (389)
330 PRK05632 phosphate acetyltrans 42.2 2.1E+02 0.0045 35.5 12.0 193 445-674 231-433 (684)
331 PRK13478 phosphonoacetaldehyde 42.0 37 0.00081 36.4 5.0 16 590-605 3-18 (267)
332 PRK04128 1-(5-phosphoribosyl)- 41.2 77 0.0017 33.5 7.0 62 578-658 31-93 (228)
333 COG0474 MgtA Cation transport 41.1 66 0.0014 41.2 7.7 39 622-661 547-585 (917)
334 COG2248 Predicted hydrolase (m 41.0 3.7E+02 0.0079 29.1 11.6 44 223-284 57-100 (304)
335 KOG1615 Phosphoserine phosphat 40.6 24 0.00052 36.2 2.9 42 760-811 151-192 (227)
336 PRK08942 D,D-heptose 1,7-bisph 40.0 39 0.00084 33.9 4.5 34 770-811 106-139 (181)
337 PRK10826 2-deoxyglucose-6-phos 39.8 15 0.00033 38.1 1.5 17 589-605 5-21 (222)
338 COG3700 AphA Acid phosphatase 37.6 56 0.0012 33.0 4.8 82 578-660 50-151 (237)
339 PF13419 HAD_2: Haloacid dehal 37.5 30 0.00065 33.4 3.2 41 621-662 76-116 (176)
340 PF06258 Mito_fiss_Elm1: Mitoc 36.9 6.2E+02 0.013 28.1 13.6 111 361-482 111-228 (311)
341 PF09949 DUF2183: Uncharacteri 36.8 82 0.0018 28.9 5.6 35 379-417 49-83 (100)
342 KOG0208 Cation transport ATPas 35.9 94 0.002 39.3 7.3 231 576-844 649-908 (1140)
343 PRK09449 dUMP phosphatase; Pro 35.7 61 0.0013 33.5 5.3 16 590-605 2-17 (224)
344 PLN02919 haloacid dehalogenase 34.7 25 0.00054 45.7 2.6 55 769-834 220-285 (1057)
345 TIGR01454 AHBA_synth_RP 3-amin 34.6 47 0.001 33.9 4.1 40 622-662 75-114 (205)
346 PF12038 DUF3524: Domain of un 34.5 1.1E+02 0.0024 30.7 6.4 80 231-311 59-143 (168)
347 COG4567 Response regulator con 34.2 1.4E+02 0.003 29.6 6.8 76 449-524 41-124 (182)
348 KOG4549 Magnesium-dependent ph 34.2 95 0.0021 29.8 5.5 57 592-654 19-75 (144)
349 KOG2467 Glycine/serine hydroxy 33.9 1E+02 0.0022 34.8 6.5 85 749-851 340-433 (477)
350 TIGR01449 PGP_bact 2-phosphogl 33.5 49 0.0011 33.7 4.1 39 623-662 86-124 (213)
351 PRK01122 potassium-transportin 33.4 77 0.0017 39.1 6.3 70 581-662 415-484 (679)
352 PRK09552 mtnX 2-hydroxy-3-keto 33.3 26 0.00057 36.4 2.0 37 623-660 75-111 (219)
353 PRK11590 hypothetical protein; 31.6 70 0.0015 33.1 4.9 44 624-668 97-145 (211)
354 PRK06769 hypothetical protein; 31.1 50 0.0011 33.1 3.6 41 769-820 95-136 (173)
355 PRK10840 transcriptional regul 31.0 3E+02 0.0064 28.0 9.5 78 449-526 37-125 (216)
356 TIGR01656 Histidinol-ppas hist 30.9 28 0.0006 33.8 1.6 42 768-820 102-144 (147)
357 cd04248 AAK_AK-Ectoine AAK_AK- 30.6 3.8E+02 0.0082 29.7 10.4 55 578-648 144-198 (304)
358 PHA03392 egt ecdysteroid UDP-g 30.3 9.9E+02 0.022 28.4 16.2 102 444-556 350-465 (507)
359 TIGR00250 RNAse_H_YqgF RNAse H 30.0 2.3E+02 0.0051 27.1 7.8 71 380-460 35-105 (130)
360 TIGR01522 ATPase-IIA2_Ca golgi 29.8 88 0.0019 40.0 6.2 69 582-662 494-567 (884)
361 TIGR01106 ATPase-IIC_X-K sodiu 29.8 55 0.0012 42.4 4.5 40 621-661 567-606 (997)
362 KOG2882 p-Nitrophenyl phosphat 29.5 58 0.0013 35.7 3.8 55 590-660 21-75 (306)
363 PRK09456 ?-D-glucose-1-phospha 29.4 36 0.00077 34.7 2.2 43 769-822 143-186 (199)
364 PF10933 DUF2827: Protein of u 29.3 6.9E+02 0.015 28.4 12.1 146 374-546 201-348 (364)
365 TIGR01548 HAD-SF-IA-hyp1 haloa 29.1 66 0.0014 32.6 4.1 36 626-662 110-145 (197)
366 COG2503 Predicted secreted aci 28.7 63 0.0014 34.4 3.8 68 589-660 77-160 (274)
367 TIGR01490 HAD-SF-IB-hyp1 HAD-s 28.1 74 0.0016 32.2 4.3 40 622-662 87-126 (202)
368 TIGR01647 ATPase-IIIA_H plasma 28.1 1.2E+02 0.0027 38.0 7.0 68 583-662 409-481 (755)
369 TIGR01261 hisB_Nterm histidino 27.2 35 0.00075 34.0 1.6 44 768-822 104-148 (161)
370 PRK14010 potassium-transportin 26.9 1.2E+02 0.0026 37.4 6.4 73 578-662 408-480 (673)
371 TIGR01668 YqeG_hyp_ppase HAD s 26.1 75 0.0016 31.7 3.8 64 768-842 92-161 (170)
372 PF13419 HAD_2: Haloacid dehal 25.4 43 0.00093 32.3 1.9 32 768-806 134-165 (176)
373 TIGR02253 CTE7 HAD superfamily 25.3 83 0.0018 32.3 4.1 39 623-662 95-133 (221)
374 TIGR03351 PhnX-like phosphonat 25.2 78 0.0017 32.6 3.9 15 591-605 1-15 (220)
375 PRK11587 putative phosphatase; 24.7 75 0.0016 32.8 3.7 16 590-605 2-17 (218)
376 COG0546 Gph Predicted phosphat 24.7 87 0.0019 32.6 4.1 39 623-662 90-128 (220)
377 PRK00109 Holliday junction res 24.6 3.3E+02 0.0071 26.4 7.8 70 381-460 42-111 (138)
378 TIGR01428 HAD_type_II 2-haloal 24.6 95 0.0021 31.3 4.3 39 623-662 93-131 (198)
379 PRK05282 (alpha)-aspartyl dipe 24.5 6.8E+02 0.015 26.6 10.8 113 364-500 3-125 (233)
380 PLN02575 haloacid dehalogenase 24.4 1.1E+02 0.0024 35.0 5.1 36 624-660 218-253 (381)
381 TIGR01657 P-ATPase-V P-type AT 24.3 1.3E+02 0.0028 39.4 6.3 82 578-661 602-694 (1054)
382 PRK13396 3-deoxy-7-phosphohept 24.2 8.1E+02 0.017 27.8 11.7 49 443-495 168-216 (352)
383 TIGR02254 YjjG/YfnB HAD superf 24.0 71 0.0015 32.7 3.3 15 591-605 1-15 (224)
384 PRK14057 epimerase; Provisiona 24.0 5.2E+02 0.011 27.9 9.7 66 399-468 157-223 (254)
385 TIGR01662 HAD-SF-IIIA HAD-supe 23.7 58 0.0013 30.6 2.4 43 768-820 86-130 (132)
386 TIGR01511 ATPase-IB1_Cu copper 23.7 71 0.0015 38.5 3.7 40 768-822 454-493 (562)
387 KOG3120 Predicted haloacid deh 23.5 72 0.0016 33.5 3.0 19 588-606 10-28 (256)
388 PLN00414 glycosyltransferase f 23.3 2.9E+02 0.0062 32.4 8.4 109 445-562 317-441 (446)
389 PLN02779 haloacid dehalogenase 23.0 62 0.0013 35.3 2.7 22 584-605 33-54 (286)
390 PF12689 Acid_PPase: Acid Phos 22.7 2.1E+02 0.0046 28.8 6.3 103 693-822 48-152 (169)
391 TIGR01422 phosphonatase phosph 22.5 85 0.0018 33.2 3.6 39 622-661 99-137 (253)
392 PRK10517 magnesium-transportin 22.4 1.7E+02 0.0038 37.4 6.9 41 621-662 549-589 (902)
393 cd01019 ZnuA Zinc binding prot 22.2 7.7E+02 0.017 26.8 11.1 42 621-662 210-252 (286)
394 TIGR01458 HAD-SF-IIA-hyp3 HAD- 22.0 1.3E+02 0.0028 32.2 4.9 59 769-838 181-254 (257)
395 PF05159 Capsule_synth: Capsul 21.8 6.4E+02 0.014 26.8 10.3 101 361-492 115-223 (269)
396 PRK09722 allulose-6-phosphate 21.5 6.4E+02 0.014 26.7 9.8 64 399-466 133-197 (229)
397 PLN02770 haloacid dehalogenase 20.9 1.1E+02 0.0025 32.3 4.2 39 623-662 109-147 (248)
398 PF10307 DUF2410: Hypothetical 20.8 1.9E+02 0.004 30.0 5.4 74 623-703 55-131 (197)
399 TIGR02009 PGMB-YQAB-SF beta-ph 20.6 47 0.001 32.9 1.1 15 591-605 1-15 (185)
400 PF00072 Response_reg: Respons 20.6 3.6E+02 0.0078 23.6 7.0 74 449-522 31-112 (112)
401 PRK13225 phosphoglycolate phos 20.5 1.2E+02 0.0026 32.9 4.3 40 622-662 142-181 (273)
402 PF04312 DUF460: Protein of un 20.5 1E+02 0.0022 29.9 3.2 54 592-660 44-99 (138)
403 KOG3109 Haloacid dehalogenase- 20.4 87 0.0019 32.9 2.9 57 770-836 163-225 (244)
404 PRK13587 1-(5-phosphoribosyl)- 20.4 2.9E+02 0.0063 29.2 7.1 62 578-658 32-96 (234)
405 COG0036 Rpe Pentose-5-phosphat 20.2 5.5E+02 0.012 27.1 8.8 76 383-468 123-199 (220)
406 PLN03007 UDP-glucosyltransfera 20.0 5.9E+02 0.013 30.0 10.3 74 445-528 350-441 (482)
No 1
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=6.1e-169 Score=1508.62 Aligned_cols=807 Identities=85% Similarity=1.326 Sum_probs=745.5
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccccchhccccCCCCCCcccccCCCCCC--
Q 003029 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (856)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (856)
||||+|+|+++..+.+|++||+|+ ||||+.+++++..++.+ +.+.++.++++..+|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888899999999 99999999998555555 777899999999999999999999999998733
Q ss_pred CCCCCcccCCCCCCCCCcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH
Q 003029 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (856)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~ 157 (856)
...++|.+++++.+-++||||||||||+.++++++|.|++++++|||++||.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 36688888888776689999999999999988778999999999999999999977899999999988776555666777
Q ss_pred hhcCceEEEEecChHhHHHHHhhhhhhhccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q 003029 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (856)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DvIwv 237 (856)
.+.+++|+||||+++++++||+||||++|||+|||++..+.++....+.++..|++|++||++||++|.+++++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88999999999999999999999999999999999864443333222334466999999999999999999999999999
Q ss_pred eCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC
Q 003029 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (856)
Q Consensus 238 HDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~ 317 (856)
||||||++|.+||+++|+++||||+|||||++|+||+||+|++||+|||+||+|||||++|++||+++|.+++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccC
Q 003029 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (856)
Q Consensus 318 ~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~ 397 (856)
+++++||.++|.++|+|||++.|...+..++++++++.++++++++++|++|||||+.|||.++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHH
Q 003029 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (856)
Q Consensus 398 ~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~l 477 (856)
+|+|+||+.|+|+++++|++|+.++.++|++||++||+.+|.||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003029 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (856)
Q Consensus 478 Eama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (856)
||||||.+++|+||+|||+|++++|+.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+.+|+++|+.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999998999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHhhhhccccCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC
Q 003029 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (856)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d 637 (856)
+|+.+..++..+..+..+.|+.+.+.++|+++++|||||||||||++..+.|..+.+++.+....|+++++++|++|++|
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998876666666677899999999999999999999999999999988886555666556778999999999999999
Q ss_pred CCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce
Q 003029 638 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717 (856)
Q Consensus 638 ~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s 717 (856)
++|+|+|+|||+++.|++||+.++++++||||++++..++.|...+++..+.+|++.+..+|++|++++||+++|.|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999977788985554566789999999999999999999999999999
Q ss_pred EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 718 i~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
++|||+++||+++..|++++.++|+...+.+.+++|+.|+++|||+|.|+|||.|+++|++++..+.....++|||+|+|
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999966566667899999999999999999999999999998753322224689999999
Q ss_pred cCCcc-cccccccccc
Q 003029 798 HFLGK-NCNLPLQFLM 812 (856)
Q Consensus 798 D~~~n-De~M~f~~~~ 812 (856)
| |.+ ||+| |+++.
T Consensus 798 D-d~~~DEdm-F~~l~ 811 (934)
T PLN03064 798 H-FLGKDEDI-YTFFE 811 (934)
T ss_pred C-CCCCcHHH-HHHHh
Confidence 9 875 9999 99984
No 2
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=6.6e-154 Score=1388.74 Aligned_cols=730 Identities=36% Similarity=0.644 Sum_probs=660.2
Q ss_pred CCcEEEEEcCCccceeecCC--CcEEEEecCCcHHHhhccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 003029 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (856)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~--~~~~~~~~~ggl~~~l~~~-~--~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (856)
+.||||||||||+.++++++ +.|++++++|||+++|.++ + ..+++||||+|..++.+++++.....+.+|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999998643 6899999999999999977 3 47899999999877765554444666788999999
Q ss_pred ecChHhHHHHHhhhhhhhccccccCCC-CCcccccccchhhHH-HHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCccchh
Q 003029 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (856)
Q Consensus 168 ~l~~~~~~~~y~~f~n~~LWp~fH~~~-~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~-~DvIwvHDyhl~l 244 (856)
||+++++++||+||||++|||+|||+. ..+ .....|+. .|++|++||++||++|.+++++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~----~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSP----DLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCc----cccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999984 322 11235774 5999999999999999999998 6999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC----Ccee
Q 003029 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (856)
Q Consensus 245 lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~----~~v~ 320 (856)
+|.+||+++|+++||||+|||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc--CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCc
Q 003029 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (856)
Q Consensus 321 ~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~ 398 (856)
|+||.++|.++|+|||++.|......+++.+++++++++++ ++++|++|||||+.|||.++|+||++||++||+|+++
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999989999999999999995 6999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHH
Q 003029 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (856)
Q Consensus 399 v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lE 478 (856)
|+||||+.|+|+++++|++++.+++++|++||++||+.+|.||+|+.+.++++++.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCC---------------CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 479 ama~~~~---------------~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
|+|||.+ ++|+||+|||+||+.+| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999863 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhHHhhh-hccc--------------cCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCC
Q 003029 544 TTHTAQEWAETFVSELNDTVVEAQ-LRIK--------------QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (856)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~~~~~~~-~~~~--------------~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~ 608 (856)
.+||+.+|+++||.+|+.+++.+. .+.. ..+++|+.+.+.++|+++++|+|++||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 1111 126889999999999999999999999999998742
Q ss_pred CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc-CceEEeeCceEEEecCC-eeeeccccc
Q 003029 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 686 (856)
Q Consensus 609 p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~lgliaenG~~i~~~~~-~w~~~~~~~ 686 (856)
....|+++++++|++|++++|+.|+|+|||++..|++||+.+ +++++||||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 135688999999999999999999999999999999999997 69999999999996444 787543 33
Q ss_pred CChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCC
Q 003029 687 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 766 (856)
Q Consensus 687 ~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~g 766 (856)
.+..|++.+..+++.|++++||+++|.|+++++|||+++|++++..|++++..++ ...+.+..+.+..|+++|||+|++
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4678999999999999999999999999999999999999999999999999988 666666678889999999999999
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC-----------cceEEeCCC--Cc-cccCCHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT-----------ISTVRLDSS--FL-HYLRMKM 832 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~-----------~~~v~V~~~--~~-~~l~~~~ 832 (856)
+|||.|+++|++++.. ..+++|+++|||| |.|||+| |++++.. +++|+||.. .| |||.++.
T Consensus 761 vnKG~Al~~Ll~~~~~---~g~~~d~vl~~GD-D~nDedM-F~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~ 835 (854)
T PLN02205 761 VSKGLVAKRLLSIMQE---RGMLPDFVLCIGD-DRSDEDM-FEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTA 835 (854)
T ss_pred CCHHHHHHHHHHHHHh---cCCCcccEEEEcC-CccHHHH-HHHhhhhccCCcccccccceeEEECCCCccCeEecCCHH
Confidence 9999999999865321 0156899999999 9999999 9999742 478888753 34 9999999
Q ss_pred HHHHHHHHHHHHH
Q 003029 833 CMRFLSQNYLMMA 845 (856)
Q Consensus 833 ~~~~~l~~~~~~~ 845 (856)
+|+.||+.|+...
T Consensus 836 eV~~lL~~L~~~~ 848 (854)
T PLN02205 836 EIVRLMQGLASVS 848 (854)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998643
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.2e-151 Score=1367.16 Aligned_cols=743 Identities=70% Similarity=1.161 Sum_probs=672.9
Q ss_pred CCcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 003029 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (856)
++||||||||||+.+.++++|.|++++++|||++||.+++..+++||||+|..+++++++..+...+.+++|+|||| ++
T Consensus 10 ~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l-~~ 88 (797)
T PLN03063 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFL-NE 88 (797)
T ss_pred CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEeeh-HH
Confidence 78999999999999888767999999999999999999966699999999987665545556677788999999999 99
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~ 252 (856)
++++||+||||++|||+|||++..+.+.......++..|++|++||++||++|.+++++||+||||||||+++|++||++
T Consensus 89 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~~lR~~ 168 (797)
T PLN03063 89 VFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEY 168 (797)
T ss_pred HHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHHHHHHh
Confidence 99999999999999999999843321221222334566999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEee
Q 003029 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332 (856)
Q Consensus 253 ~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP 332 (856)
.|+++||||+|||||++|+||+||+|++|++|||+||+|||||++|++||+++|++++|++....++.++|+.++|.++|
T Consensus 169 ~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP 248 (797)
T PLN03063 169 NNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248 (797)
T ss_pred CCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999988778899999999999999
Q ss_pred cccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCCh
Q 003029 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412 (856)
Q Consensus 333 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~ 412 (856)
+|||++.|.+....+++++....++++++++++|++||||++.||+.++|+||++|++++|+++++++|+||++|+++++
T Consensus 249 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~ 328 (797)
T PLN03063 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDV 328 (797)
T ss_pred cccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCch
Confidence 99999999987777777777778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEE
Q 003029 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (856)
Q Consensus 413 ~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVl 492 (856)
++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..++|++|+
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVl 408 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVL 408 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999878899999
Q ss_pred eCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHhhhhcccc
Q 003029 493 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572 (856)
Q Consensus 493 Se~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~ 572 (856)
||++|+++.+|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||++|..+...+......
T Consensus 409 Se~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~ 488 (797)
T PLN03063 409 SEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488 (797)
T ss_pred eCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccC
Confidence 99999999997799999999999999999999999999999999999999999999999999999999998765555556
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 573 ~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.+++|+.+.+.++|++|++|+|||||||||++..++|. .+....|+++++++|++|+++++|.|+|+|||+.+.
T Consensus 489 ~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~ 562 (797)
T PLN03063 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI 562 (797)
T ss_pred CCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH
Confidence 67889999999999999999999999999998754331 113567899999999999999999999999999999
Q ss_pred HHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHH
Q 003029 653 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI 732 (856)
Q Consensus 653 l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~ 732 (856)
|++||+.++++++||||++++..++.|...+++..+.+|++.+..+|++|++++||+++|.|+++++||||++||+++..
T Consensus 563 L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~ 642 (797)
T PLN03063 563 LDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRA 642 (797)
T ss_pred HHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHH
Confidence 99999998999999999999976778986554556788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-cccccccccc
Q 003029 733 QARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFL 811 (856)
Q Consensus 733 qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~ 811 (856)
|++++.++|.+..+.+.+++|+.|+++|||+|.++|||.|+++|++++........++|||+|+|| +. +||+| |+++
T Consensus 643 ~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdm-F~~l 720 (797)
T PLN03063 643 QARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDV-YTFF 720 (797)
T ss_pred HHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHH-HHhc
Confidence 999999998444555668999999999999999999999999999987211011135799999999 74 69999 9999
Q ss_pred ccCc------------------------------ceEEeCCC--Cc-cccCCHHHHHHHHHHHHHH
Q 003029 812 MQTI------------------------------STVRLDSS--FL-HYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 812 ~~~~------------------------------~~v~V~~~--~~-~~l~~~~~~~~~l~~~~~~ 844 (856)
+..+ ++|+||.. .| |||.++.+|+.||+.|..+
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~ 786 (797)
T PLN03063 721 EPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVA 786 (797)
T ss_pred cccccccccccccccccccccccccccccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhcc
Confidence 8644 56888764 34 9999999999999998853
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.9e-140 Score=1275.99 Aligned_cols=718 Identities=42% Similarity=0.730 Sum_probs=659.4
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCceEEEEecC
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (856)
+||||||||+|+.+.+++ |.|++++++|||++||.++ +..+++||||+|...+.. .++..+...+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 479999999999987754 5899999999999999998 778999999999765542 222334566789999999999
Q ss_pred hHhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHH
Q 003029 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (856)
Q Consensus 171 ~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~l 249 (856)
+++++.||+||||++|||+|||++... .|+ ..|++|++||++||++|.+.++++|+||||||||+++|++|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999996433 377 45999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEE
Q 003029 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (856)
Q Consensus 250 r~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~ 329 (856)
|++.|+++||||+|+|||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.....++++|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 003029 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (856)
Q Consensus 330 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r 409 (856)
++|+|||++.|.+...++++.+..+.+|+.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|+|
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999998777777777888888888999999999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCce
Q 003029 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (856)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~ 489 (856)
.+.++|+++++++++++++||++||+.+|.||+|+.+.+++++++++|++|||||+||++||||||++||||||.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHhhhhc
Q 003029 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (856)
Q Consensus 490 lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~ 569 (856)
+|+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+|++.|++++++++.+||+..|+++|+..|.++...+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987654433
Q ss_pred cccCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 570 ~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
....++.|+.+.+.++|++|++|||+|||||||++...+| ....++++++++|++|++|+|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 3344678899999999999999999999999999976554 2467899999999999998999999999999
Q ss_pred HhhHHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhh
Q 003029 650 RNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 729 (856)
Q Consensus 650 ~~~l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~ 729 (856)
+..++++|+.+++++|++||++++..++.|.... ..+..|++.+.++++.+.++++|+++|.|+.+++|||+++|+++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999999999999999999997777887643 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccc
Q 003029 730 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQ 809 (856)
Q Consensus 730 ~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~ 809 (856)
+..+++++.+++ ...+.+..+.++.|+.++||+|+++|||.|+++|++. +++|+++|||| +.||++| |+
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~M-f~ 688 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDM-FR 688 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHH-HH
Confidence 999999999888 6666667888889999999999999999999999983 45899999999 9999999 99
Q ss_pred ccccCcceEEeCCC--Cc-cccCCHHHHHHHHHHHHH
Q 003029 810 FLMQTISTVRLDSS--FL-HYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 810 ~~~~~~~~v~V~~~--~~-~~l~~~~~~~~~l~~~~~ 843 (856)
+++..+++|.||+. +| |+|.++.+|..+|+.++.
T Consensus 689 ~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 689 ALPETAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred hcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 99877889999864 34 999999999999999864
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-117 Score=1036.64 Aligned_cols=711 Identities=46% Similarity=0.778 Sum_probs=657.2
Q ss_pred CCcEEEEEcCCcccee-ecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecC
Q 003029 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (856)
Q Consensus 93 ~~~livvsnrlP~~~~-~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (856)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.+. ++.+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 44588999999999999999987 777899999999888888777778888899999999999
Q ss_pred hHhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHH
Q 003029 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (856)
Q Consensus 171 ~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~l 249 (856)
++...++|++||+++|||+|||...+.... .. .|+ +.|.+|..+|+.||+++++.+++||+|||||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~--~~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPA--FK-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchh--hh-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 999999999999999999999993322111 11 344 55999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccC----CCceeeCCee
Q 003029 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (856)
Q Consensus 250 r~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~----~~~v~~~g~~ 325 (856)
|+...+++||||+|.|||++|+|+|+|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.++||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~ 405 (856)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+..++.||++|+++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999988888899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
.|+++++++|++++.++...+.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 486 ~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+.+++|+|+|+|+.+.++++++++||||.+++|.+|..+|+|+.+++..|+...+.++..|+...|+..|++.+.+.++.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhhccccCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEE
Q 003029 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (856)
Q Consensus 566 ~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~ 645 (856)
.. ....+.+.|..+.++..|++|++|+|++|||||+....+ ..++..|+.||.||+|+|+|+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~-----------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPRS-----------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCCCC-----------------chHHHHHHHHhcCCCCeEEEE
Confidence 65 333445669999999999999999999999998887531 119999999999999999999
Q ss_pred cCCCHhhHHHHhccc-CceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeec
Q 003029 646 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 724 (856)
Q Consensus 646 SGR~~~~l~~~~~~l-~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~ 724 (856)
|||++..++.|+... ++|++||||++++.+++ |.+.+ .+++|++.+.++|++|++|||||++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998877 89999999999998665 98865 68899999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccc
Q 003029 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNC 804 (856)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe 804 (856)
+|+++|..||+++.++| .. .+.+++|+.|+..|||+|.|+|||.|+.+++..+. .++||++|+|| +.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67889999999999999999999999999999887 46899999999 99999
Q ss_pred cccccccccCc--------ceEEeCC--CCc-cccCCHHHHHHHHH
Q 003029 805 NLPLQFLMQTI--------STVRLDS--SFL-HYLRMKMCMRFLSQ 839 (856)
Q Consensus 805 ~M~f~~~~~~~--------~~v~V~~--~~~-~~l~~~~~~~~~l~ 839 (856)
+| |+++.... +.+.||. +-| |.|.++.+|.++|+
T Consensus 687 d~-~~~~~~~~~~~~~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 687 DM-FEFISKAKDPEKVEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred HH-HHHHhhccCCcccceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 99 99987653 4555554 334 99999999999986
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=3.7e-114 Score=973.04 Aligned_cols=451 Identities=35% Similarity=0.635 Sum_probs=417.5
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHh-hcCceEEEEecCh
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDE 171 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~ 171 (856)
+||||||||+|+... . +.++|||++||.++ +..+|+||||+|....++ . .+... -.++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~~-----~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~--~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-----H---KASAGGLAVGILGALKAAGGLWFGWSGETGNED--Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCCC-----C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc--c-cchhhhcCCceEEEecCCH
Confidence 689999999996321 1 45789999999999 788999999999753321 1 12233 2468999999999
Q ss_pred HhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHH
Q 003029 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (856)
Q Consensus 172 ~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr 250 (856)
+++++||+||||++|||+|||+.... .|+ +.|++|++||++||++|.+.+++||+||||||||+++|++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999996432 366 559999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeEEEE
Q 003029 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (856)
Q Consensus 251 ~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~-~~v~~~g~~~~v~ 329 (856)
+++|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||++||.+++|++... ..+.++|+.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987644 4567889999999
Q ss_pred EeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 003029 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (856)
Q Consensus 330 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r 409 (856)
++|+|||++.|...+..+ +.+.++.++++++++++|++||||||+|||+++|+||++||++||+|+++|+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887655 4667888999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcC-CCCc
Q 003029 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (856)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~-~~~g 488 (856)
+++++|++++++++++|++||++||+.+|.||+|+++.++++++.|||++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7899
Q ss_pred eEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 489 ~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+...
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 78999999999999999999999999999999999999999999999999999999987543
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=9.4e-113 Score=972.25 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.3
Q ss_pred EEcCCccceeecCCCc--EEEEecCCcHHHhhccc-c-cCCcEEEEeCCCCCCCchhh-HHHH-HhhcCceEEEEecChH
Q 003029 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (856)
Q Consensus 99 vsnrlP~~~~~~~~~~--~~~~~~~ggl~~~l~~~-~-~~~~~Wvg~~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (856)
||||||++++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++. .... ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 47799999999753221111 1111 2235689999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|++.++++|+||||||||+++|++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999986433 466 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--------------
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~-------------- 317 (856)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 318 -------~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
++.++||.++|.++|+|||++.|.+...++++.+.++.+|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~E 470 (856)
+||+++++|+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003029 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (856)
Q Consensus 471 G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 550 (856)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999998889999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003029 551 WAETFVSELND 561 (856)
Q Consensus 551 W~~~fl~~l~~ 561 (856)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=6.4e-113 Score=976.11 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=356.1
Q ss_pred cEEEEEcCCccceeecC-CCc--EEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCceEEEEe
Q 003029 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (856)
Q Consensus 95 ~livvsnrlP~~~~~~~-~~~--~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (856)
||||||||||+.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999999876 666 88889999999999999 7789999999998766544 233334567899999999
Q ss_pred cChHhHHHHHhhhhhhhccccccCCCC-CcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHH
Q 003029 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (856)
Q Consensus 169 l~~~~~~~~y~~f~n~~LWp~fH~~~~-~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp 246 (856)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||++||++|.+.+++||+||||||||+++|
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999998742 11 113466 45999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--ceeeCCe
Q 003029 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (856)
Q Consensus 247 ~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~--~v~~~g~ 324 (856)
++||+++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||+++|++++|++.... +++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654 7999999
Q ss_pred eEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 325 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
.++|.++|+|||++.|.+.+.++++.++++.+++++++ +++|++|||+|++|||.++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999899999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
|+.|+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999965789999999999999999999999999999999999999999999999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-108 Score=920.04 Aligned_cols=463 Identities=49% Similarity=0.853 Sum_probs=430.6
Q ss_pred CCCCCcEEEEEcCCccceeec-CCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 003029 90 TFSRQRLLVVANRLPVSAIRR-GEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (856)
Q Consensus 90 ~~~~~~livvsnrlP~~~~~~-~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (856)
+...+|+|+||||+|+...+. +++......++|||+++|.++ +..+++|+||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 445789999999999998643 466788899999999999999 788999999999887633324445556678999999
Q ss_pred ecChHhHHHHHhhhhhhhccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHH
Q 003029 168 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (856)
Q Consensus 168 ~l~~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp 246 (856)
.++++++++||++|||++|||+|||+.... .|++ .|+.|++||++||++|++.+++||+||||||||+++|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995432 3664 4999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee---eCC
Q 003029 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 323 (856)
Q Consensus 247 ~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~---~~g 323 (856)
++||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+|||||++|++||+++|+++++.. ....++ ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 222333 447
Q ss_pred eeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEE
Q 003029 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (856)
Q Consensus 324 ~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv 402 (856)
+.+++.++|+|||+..|.....++.++.+..++++.+.+ +++|++|||||++||+.++++||++||++||++++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999998888888888899988876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 403 ~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
||+.|+|+++++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||++||++++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
|.+++|+||+|||+|++.+| .+|++|||||.+++|++|.+||+|+++||++|++++++.|.+||+++|+.+|+.+|...
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99889999999999999999 77999999999999999999999999999999999999999999999999999999863
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=5.2e-104 Score=905.88 Aligned_cols=452 Identities=56% Similarity=0.919 Sum_probs=421.6
Q ss_pred cEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchh-hHHHHHhhcCceEEEEecChH
Q 003029 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG-QKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~-~~~~~~~~~~~~~~pV~l~~~ 172 (856)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...+++++ .........+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988654 2 567899999999998 77899999999986553332 222234567899999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|.+.++++|+||||||||+++|.+||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999996433 466 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEe
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~vi 331 (856)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC
Q 003029 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (856)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~ 411 (856)
|+|||++.|.+....+++.+....+|++++++++|++|||+++.||++.+|+||++|++++|+++++++|+|+++|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEE
Q 003029 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (856)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lV 491 (856)
+++|.++++++++++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||...+|+||
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999866668899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 492 lSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 589999999999999999999999999999999999999999999999999999885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=8.1e-95 Score=835.36 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=425.2
Q ss_pred cEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChHh
Q 003029 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (856)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (856)
||||||||+|+.++++++|.|+++.++|||++||.++ +..+++||||+|...+.+++.........+++|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998888999999999999999999 778999999999877655444456677789999999999999
Q ss_pred HHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc
Q 003029 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (856)
Q Consensus 174 ~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~ 252 (856)
++.||+||||++|||+|||+.... .|+ +.|++|++||+.||++|.+.++++|+||||||||+++|.++|++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 366 45999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeEEEEEe
Q 003029 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (856)
Q Consensus 253 ~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~-~~v~~~g~~~~v~vi 331 (856)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.+++.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987654 678899999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC
Q 003029 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (856)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~ 411 (856)
|+|||++.|.+...++++.+..++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666666666667667889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEE
Q 003029 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (856)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lV 491 (856)
++++.++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||.+||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999876778899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 492 lSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|++++++.+++++++++.+||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999887
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.4e-35 Score=358.10 Aligned_cols=524 Identities=14% Similarity=0.158 Sum_probs=332.5
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhc-----------------CcccHHH-HHHhhcCCEEEE
Q 003029 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----------------LPSRSDL-LRAVLAADLVGF 293 (856)
Q Consensus 232 ~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~-----------------lp~~~~i-l~~ll~aDlIgf 293 (856)
.|+||.|+++--.++..|++.. ++|.+++.|.. ..+-++. ++.|-+. -..+..||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999888888888765 68899999963 1121110 1122121 223668999999
Q ss_pred eCHHHHHHHHHHHH-------HHhCcccCCCceeeCCe-eEEEEEeecccChhhhhhhhcCCch-------------HHH
Q 003029 294 HTYDYARHFVSACT-------RILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPV-------------QVH 352 (856)
Q Consensus 294 ~t~~~~~~Fl~~~~-------~~lg~~~~~~~v~~~g~-~~~v~viP~GID~~~f~~~~~~~~~-------------~~~ 352 (856)
.|..........-. +.|.. ....++..+|+ ..++.|||+|||++.|.+.....+. ...
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 99887765432100 11000 00123333332 3389999999999999874221110 001
Q ss_pred HHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 003029 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (856)
Q Consensus 353 ~~~lr~~~--~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~----~~l~~~l~~lv 426 (856)
...++..+ +++++||+|||+++.||+..+|+||..+.+..+.. ++.+ ++|... +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12333333 57889999999999999999999999986543221 2333 344321 11111 12234555666
Q ss_pred HHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc
Q 003029 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (856)
Q Consensus 427 ~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l 502 (856)
.+.+-. + .|. |.|+++.++++++|+.| ||||+||++||||++++|||||+ .|||+|+.+|..+.+
T Consensus 542 ~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 554321 1 255 58999999999999998 69999999999999999999994 999999999999887
Q ss_pred --cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHhhh-hc-cc-----c-
Q 003029 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQ-LR-IK-----Q- 572 (856)
Q Consensus 503 --g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~-~~-~~-----~- 572 (856)
|.+|++|+|.|++++|++|.++|+++ +.+.++..++++.+..|+|..-++.++..+......+. .+ .. .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 67899999999999999999999854 47777888889999999999999999988877643321 00 00 0
Q ss_pred --CCC-------------------------------Ccch-------HHHHHHHH----------------------hcC
Q 003029 573 --VPP-------------------------------SLRE-------ADSIERYL----------------------RSN 590 (856)
Q Consensus 573 --~~~-------------------------------~l~~-------~~~~~~y~----------------------~s~ 590 (856)
-.+ .++. ...+.... .-.
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 000 0010 01111111 112
Q ss_pred CeEEE--EecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhh---cCCCCeEEEEcCCCHhhHHHHhcccC----
Q 003029 591 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC---HDPKTTIVVLSGSDRNVLDKNFQEYN---- 661 (856)
Q Consensus 591 ~rLI~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~---~d~g~~V~I~SGR~~~~l~~~~~~l~---- 661 (856)
++||+ +|+|+| +.. .+.+++.++.+. ....+.++++|||+...+...+...+
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 45666 899999 222 122333344443 22347799999999999999887653
Q ss_pred --ceEEeeCceEEEecC------Ceeeec--ccccCChHH-HHHHHHHHHHHHhcC--------CCcEEeeecce--EEE
Q 003029 662 --LWLAAENGMFLRCTT------GKWMTT--MPEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 720 (856)
Q Consensus 662 --lgliaenG~~i~~~~------~~w~~~--~~~~~~~~w-~~~v~~i~~~~~~rt--------~gs~ie~k~~s--i~~ 720 (856)
..+||.-|+.|+..+ ..|..- ...+++..| .+.+++.+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 468999999987631 222210 002345667 345665555443311 22233332222 223
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE-EEEe
Q 003029 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIG 797 (856)
Q Consensus 721 ~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~--g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v-la~G 797 (856)
.|.-.|++.. ...+++.+.|... ...+.++. +..+++|.|...|||.|+++|+.++| ++.+.+ +++|
T Consensus 911 SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3431122211 1234566666221 23445443 34799999999999999999999999 678888 4499
Q ss_pred cCCcc-c-ccc
Q 003029 798 HFLGK-N-CNL 806 (856)
Q Consensus 798 D~~~n-D-e~M 806 (856)
| +.| | ++|
T Consensus 981 d-SGntD~e~L 990 (1050)
T TIGR02468 981 E-SGDTDYEGL 990 (1050)
T ss_pred c-CCCCCHHHH
Confidence 9 999 9 556
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-36 Score=317.54 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=212.0
Q ss_pred CcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHH
Q 003029 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (856)
Q Consensus 576 ~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (856)
.+....+.+.|.++++++||+||||||++...+| ....++++++++|++|+++++|.|+|+|||+..+++.
T Consensus 3 ~~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~ 73 (266)
T COG1877 3 ALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELER 73 (266)
T ss_pred hhhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHH
Confidence 4566778889999999999999999999998877 4778999999999999999999999999999999999
Q ss_pred HhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHH
Q 003029 656 NFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (856)
Q Consensus 656 ~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~ 735 (856)
|++..++|++||||++++..++.|.....+..++.|++.+.+++++|.+++||+++|.|++++.|||++++++....++.
T Consensus 74 ~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~ 153 (266)
T COG1877 74 LFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALAL 153 (266)
T ss_pred hcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHH
Confidence 99966999999999999764455433344567789999999999999999999999999999999999998776655554
Q ss_pred HHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC-
Q 003029 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT- 814 (856)
Q Consensus 736 el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~- 814 (856)
...... . ....+++..|+..||++|.++|||.++++++++.+. ..++++|.|| |.+||+| |++++..
T Consensus 154 ~~~~~~-~---~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~------~~~~~~~aGD-D~TDE~~-F~~v~~~~ 221 (266)
T COG1877 154 AEAATL-I---NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF------DGRFPIFAGD-DLTDEDA-FAAVNKLD 221 (266)
T ss_pred HHHHhc-c---ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC------CCCcceecCC-CCccHHH-HHhhccCC
Confidence 444333 1 111288999999999999999999999999999872 2358999999 9999999 9999964
Q ss_pred cceEEeCC--CCc-cccCCHHHHHHHHHHHHHHHH
Q 003029 815 ISTVRLDS--SFL-HYLRMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 815 ~~~v~V~~--~~~-~~l~~~~~~~~~l~~~~~~~~ 846 (856)
+.+|+|+. ..+ +|+..+...+.+|.++..+..
T Consensus 222 ~~~v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 222 SITVKVGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred CceEEecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 56666654 333 999999999999999988775
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.8e-36 Score=320.29 Aligned_cols=222 Identities=33% Similarity=0.535 Sum_probs=153.0
Q ss_pred EEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEe
Q 003029 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (856)
Q Consensus 595 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~ 674 (856)
||||||||++..++| ....++++++++|++|+++++|.|+|+|||+...++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999998777 47789999999999999999999999999999996666665589999999999997
Q ss_pred cCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC-CCeE
Q 003029 675 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 752 (856)
Q Consensus 675 ~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~-~~v~ 752 (856)
.++ .|... +...+..|++.+.++++.+.+++||+++|.|+++++|||++++++++..+++++.+++ .+.... .+++
T Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNL-PADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-T-TGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Ccccccccc-ccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 655 45532 2456778999999999999999999999999999999999999999888888888888 433333 4889
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC---cceEEeCCC------
Q 003029 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT---ISTVRLDSS------ 823 (856)
Q Consensus 753 v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~---~~~v~V~~~------ 823 (856)
++.|+++|||+|.+++||.|+++|+++++.+ ..++++++|+|| |.+||+| |++++.. +++|+|++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~---~~~~~~~l~~GD-D~tDE~~-f~~~~~~~~~~~~i~V~~~~~~~~~ 224 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFA---GPKPDFVLYIGD-DRTDEDA-FRALRELEEGGFGIKVGSVSVGEKP 224 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHH-HHTTTTS----EEEEES--------
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCcc---ccccceeEEecC-CCCCHHH-HHHHHhcccCCCCeEEEeecccccc
Confidence 9999999999999999999999999998731 123689999999 9999999 9999997 899999763
Q ss_pred -Cc-cccCCHH
Q 003029 824 -FL-HYLRMKM 832 (856)
Q Consensus 824 -~~-~~l~~~~ 832 (856)
+| |||++|.
T Consensus 225 t~A~y~l~~p~ 235 (235)
T PF02358_consen 225 TAASYRLDDPS 235 (235)
T ss_dssp -----------
T ss_pred cccccccccCC
Confidence 23 9999873
No 15
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=8.5e-34 Score=313.25 Aligned_cols=242 Identities=17% Similarity=0.221 Sum_probs=195.5
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+.+|.+++++++||||||||++.+++| ..+.++++++++|++|+++ ..|+|+|||++..++++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 457899999999999999999999888 4788999999999999975 47999999999999999998899
Q ss_pred eEEeeCceEEEecC-----Ceeeeccc-----------ccCChHHHHHHHHHHHH---HHhcCCCcEEeeecceEEEEee
Q 003029 663 WLAAENGMFLRCTT-----GKWMTTMP-----------EHLNMEWVDSLKHVFEY---FTERTPRSHFEQRETSLVWNYK 723 (856)
Q Consensus 663 gliaenG~~i~~~~-----~~w~~~~~-----------~~~~~~w~~~v~~i~~~---~~~rt~gs~ie~k~~si~~~y~ 723 (856)
+++++||++++... ..|...+. ......|.+.+.++++. ++.+++|+++|.|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 99999999997421 11221100 01245677666666665 5667799999999999999999
Q ss_pred cCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCcCCcCCCCcce--EEEEecCC
Q 003029 724 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAIDY--VLCIGHFL 800 (856)
Q Consensus 724 ~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p-~gvnKG~av~~ll~~l~~~~~~~~~~d~--vla~GD~~ 800 (856)
++++++...++.++...+ .. ...+.+..|++++||+| .++|||.|+++|+++++++ ..++ ++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~-----~~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLS-----NCDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCC-----cccceeEEEECC-C
Confidence 998887666666666655 32 12478899999999999 5999999999999999842 1223 599999 9
Q ss_pred cccccccccccccC--cceEEeCC----CCc-cccCCHHHHHHHHHHHHHHHH
Q 003029 801 GKNCNLPLQFLMQT--ISTVRLDS----SFL-HYLRMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 801 ~nDe~M~f~~~~~~--~~~v~V~~----~~~-~~l~~~~~~~~~l~~~~~~~~ 846 (856)
.|||+| |++++.. +++|.|++ ..| |||++|.+|+.||+.|+.-.+
T Consensus 330 ~TDedm-F~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 330 RTDEDA-FKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred chHHHH-HHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 999999 9998763 78888874 223 999999999999999987654
No 16
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=9.4e-34 Score=309.34 Aligned_cols=239 Identities=15% Similarity=0.228 Sum_probs=190.8
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEE
Q 003029 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (856)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgli 665 (856)
..++++++|||||||||++.+++| ....++++++++|++|++ +..|+|+|||++..+.++++..+++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~la 161 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYA 161 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEE
Confidence 355678999999999999998888 366899999999999996 568999999999999999987789999
Q ss_pred eeCceEEEec--CCeeee----cccccCChHHHHHHHHHHHHH---HhcCCCcEEeeecceEEEEeecCChhhhHHHHHH
Q 003029 666 AENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 736 (856)
Q Consensus 666 aenG~~i~~~--~~~w~~----~~~~~~~~~w~~~v~~i~~~~---~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~e 736 (856)
++||++++.. +..|+. .. ......|.+.+.++++.+ +.++||+++|.|.++++||||+++++.. .+
T Consensus 162 GsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 162 GSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 9999999843 234631 11 123557888888877665 4789999999999999999999976521 23
Q ss_pred HHHHHhcCCCCCCC-eEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccccc-
Q 003029 737 MLQHLWTGPISNAS-VEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQ- 813 (856)
Q Consensus 737 l~~~L~~~~~~~~~-v~v~~g~~~vEV~p~-gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~- 813 (856)
+..++ ..++.+.+ +.+..|++++||+|. ++|||.|+++|++.++... ...++++|||| |.|||+| |++++.
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDa-F~~L~~~ 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDA-FKILRDK 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHH-HHHHhhc
Confidence 33444 33333433 789999999999995 9999999999999987421 12468999999 9999999 999975
Q ss_pred -CcceEEeCC----CCc-cccCCHHHHHHHHHHHHHHHH
Q 003029 814 -TISTVRLDS----SFL-HYLRMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 814 -~~~~v~V~~----~~~-~~l~~~~~~~~~l~~~~~~~~ 846 (856)
.+++|+|+. +.| |||++|.+|+.||+.|+...+
T Consensus 311 ~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 311 KQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred CCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 367888862 234 999999999999999987543
No 17
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=2.1e-33 Score=307.44 Aligned_cols=249 Identities=14% Similarity=0.203 Sum_probs=193.5
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
|+.-.-+.++.+.++.+||+||||||++.+++| ....++++++++|++|++ ++.|+|+|||++..+.++
T Consensus 97 l~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 97 LEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHh
Confidence 333334445556788999999999999887766 245899999999999994 789999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeee-------cccccCChHHHHHHHHH---HHHHHhcCCCcEEeeecceEEEEeecCC
Q 003029 657 FQEYNLWLAAENGMFLRCTTGKWMT-------TMPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYAD 726 (856)
Q Consensus 657 ~~~l~lgliaenG~~i~~~~~~w~~-------~~~~~~~~~w~~~v~~i---~~~~~~rt~gs~ie~k~~si~~~y~~~d 726 (856)
++..+++++++||++++..++.|.. .. ......|++.+.++ ++.+++++||+++|+|+++++||||+++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad 244 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVD 244 (366)
T ss_pred hcccCceEEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCC
Confidence 7665789999999999854333321 00 01233577666666 5567788999999999999999999997
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccc
Q 003029 727 VEFGRIQARDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNC 804 (856)
Q Consensus 727 ~e~~~~qa~el~~~L~~~~~~~~-~v~v~~g~~~vEV~p~-gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe 804 (856)
++.. .++..++ ...+.+. .+++..|++.+||+|. ++|||.|+++|++.++... ...++++|||| |.+||
T Consensus 245 ~~~~----~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDE 315 (366)
T PLN03017 245 EKKW----SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDE 315 (366)
T ss_pred HHHH----HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccH
Confidence 7542 2333333 3223333 4789999999999995 9999999999999987421 12468999999 99999
Q ss_pred ccccccccc--CcceEEeCC----CCc-cccCCHHHHHHHHHHHHHHHHh
Q 003029 805 NLPLQFLMQ--TISTVRLDS----SFL-HYLRMKMCMRFLSQNYLMMARA 847 (856)
Q Consensus 805 ~M~f~~~~~--~~~~v~V~~----~~~-~~l~~~~~~~~~l~~~~~~~~~ 847 (856)
+| |++++. .+++|+|+. ..| |+|++|.+|+.||+.|+.-.+.
T Consensus 316 Da-F~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 316 DA-FKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred HH-HHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 99 999986 479999983 233 9999999999999999887654
No 18
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=7.7e-33 Score=294.22 Aligned_cols=230 Identities=20% Similarity=0.259 Sum_probs=194.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
|++++|+|||||||++..++| ....++++++++|++|++++++.|+|+|||+...+...+...+++++++|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999987766 35778999999999999999999999999999888776655578999999
Q ss_pred ceEEEecCC--eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecC-ChhhhHHHHHHHHHHHhcCC
Q 003029 669 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 745 (856)
Q Consensus 669 G~~i~~~~~--~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~-d~e~~~~qa~el~~~L~~~~ 745 (856)
|++++.++. .|... ......|++.+.++++.+.++ ||+++|.|+.+++|||+.+ +++++..|+.++..++ ..
T Consensus 72 G~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~~- 146 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNL--TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-LS- 146 (244)
T ss_pred CEEEecCCCcceeeec--hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-hc-
Confidence 999985322 35432 122357999999999999887 9999999999999999999 8888888888888776 32
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccc----c-CcceEEe
Q 003029 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM----Q-TISTVRL 820 (856)
Q Consensus 746 ~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~----~-~~~~v~V 820 (856)
..++.++.|+.++|++|.++|||.++++++++++ ...++++|||| +.||++| |++++ . .+.+|.|
T Consensus 147 --~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~-~~~~~~~~~~~g~~~v~v 216 (244)
T TIGR00685 147 --FTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDA-FRVVNNQWGNYGFYPVPI 216 (244)
T ss_pred --CCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHH-HHHHhcccCCCCeEEEEE
Confidence 2368889999999999999999999999999998 45689999999 9999999 99993 2 3578888
Q ss_pred --CC--C-CccccCCHHHHHHHHHHHH
Q 003029 821 --DS--S-FLHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 821 --~~--~-~~~~l~~~~~~~~~l~~~~ 842 (856)
+. + +.|+++++.+|.++|+.|+
T Consensus 217 ~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 217 GSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred ecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 43 2 3399999999999998875
No 19
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=2.4e-32 Score=293.57 Aligned_cols=232 Identities=17% Similarity=0.144 Sum_probs=189.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCce
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~ 670 (856)
.++|++||||||++...+| ..+.++++++++|++|++++|+.|+|+|||+...+.++++.++++++++||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999987666 3668999999999999977899999999999999999999888889999999
Q ss_pred EEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCC
Q 003029 671 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 750 (856)
Q Consensus 671 ~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~ 750 (856)
+++..++.|.. ...+.+|...+...++.+..++||+++|.|+.+++|||+.++.+. ....++.+.+ .+.. ..
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~--~~~~~l~~~i-~~~~--~~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHE--DALLALAQRI-TQIW--PQ 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccH--HHHHHHHHHH-HhhC--Cc
Confidence 99864444432 234566777788888888888999999999999999998773221 1122333333 2111 13
Q ss_pred eEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccccc-CcceEEeCCC---Ccc
Q 003029 751 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQ-TISTVRLDSS---FLH 826 (856)
Q Consensus 751 v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~-~~~~v~V~~~---~~~ 826 (856)
+.+..|+.++||+|+++|||.|+++++++++ +..++++|||| +.||++| |++++. .+++|.|++. ++|
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~m-f~~~~~~~g~~vavg~a~~~A~~ 228 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAG-FAVVNRLGGISVKVGTGATQASW 228 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHH-HHHHHhcCCeEEEECCCCCcCeE
Confidence 5677899999999999999999999999998 55789999999 9999999 999954 4788999874 349
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 003029 827 YLRMKMCMRFLSQNYLMMARA 847 (856)
Q Consensus 827 ~l~~~~~~~~~l~~~~~~~~~ 847 (856)
+|++|.+|+.||+.|+...+-
T Consensus 229 ~l~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 229 RLAGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred eCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999976653
No 20
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=5.8e-25 Score=262.62 Aligned_cols=321 Identities=15% Similarity=0.186 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecC-----CCchhhh-hcCccc-
Q 003029 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR- 278 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~f-r~lp~~- 278 (856)
...|.-+.++.++.+...-..+||||+||||..++|.++++. ..++++.|++|.- ||...+- ..+|+.
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 344444455555544443235699999999999985544431 3567899999984 3322211 122311
Q ss_pred --------------HH-HHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhh
Q 003029 279 --------------SD-LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (856)
Q Consensus 279 --------------~~-il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~ 343 (856)
-. +..++..||.|..-++.|++.... ..--|++. .+..+..++.+||||||++.|.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPa 742 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPS 742 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCc
Confidence 11 224677899999999999887553 11011110 022345688999999999999875
Q ss_pred hcC-------C-ch---HHHHHHHHHHhc------CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 003029 344 LEI-------N-PV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 344 ~~~-------~-~~---~~~~~~lr~~~~------~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
... . .. ......++++++ +.++|++|||+++.||++.+++|+..+++ ++ +.|+++|.
T Consensus 743 tD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGd 816 (977)
T PLN02939 743 TDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGS 816 (977)
T ss_pred cccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeC
Confidence 310 0 00 011234677763 35899999999999999999999998874 23 45777774
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+ ++ ..+++++++++.+++.. ..|.| .+.++......+|++||+||+||.+|||||+++|||+|+
T Consensus 817 G-----p~-~~~e~eL~~La~~l~l~------drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG--- 880 (977)
T PLN02939 817 S-----PV-PHIQREFEGIADQFQSN------NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG--- 880 (977)
T ss_pred C-----Cc-HHHHHHHHHHHHHcCCC------CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC---
Confidence 2 21 13455666666654321 13554 677887888899999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc-----------cCCeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhcCHHHHH
Q 003029 487 KGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWA 552 (856)
Q Consensus 487 ~g~lVlSe~aG~~~~l-----------g~~g~lVnP~d~~~lA~ai~~aL~---~~~~er~~r~~~~~~~v~~~~~~~W~ 552 (856)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+..+.++. ....++|...+
T Consensus 881 -tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A 957 (977)
T PLN02939 881 -SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSA 957 (977)
T ss_pred -CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHH
Confidence 799999999998766 247999999999999999999986 2454555555433 34679999999
Q ss_pred HHHHHHHHHhH
Q 003029 553 ETFVSELNDTV 563 (856)
Q Consensus 553 ~~fl~~l~~~~ 563 (856)
+.++.-+..+.
T Consensus 958 ~qYeeLY~~ll 968 (977)
T PLN02939 958 SQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHH
Confidence 99988777654
No 21
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=1.2e-25 Score=253.20 Aligned_cols=300 Identities=23% Similarity=0.207 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCC
Q 003029 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (856)
Q Consensus 210 ~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aD 289 (856)
.+..|...++.++..+.. ....|+||+|+++.+.++...+. ...|+.+++|+++.... . ..++.+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~-~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLL-DLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhccccc-cCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCC
Confidence 467777777777655322 22569999999998777666543 36788899999875321 0 01122333445678
Q ss_pred EEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceE
Q 003029 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (856)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 366 (856)
.+.+.+.++++.+ + . ..++ ++|+|||+........+ .+....+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~----------------~--~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ----------------V--P--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC----------------C--C--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 8777663322111 0 1 1234 89999997542211111 12233455555 378899
Q ss_pred EEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003029 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (856)
Q Consensus 367 l~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 446 (856)
++|||+++.||++.+|+||+.+.+..|++ .|+++|.+... .+++.++.+++.+ ..+. ...|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~-~~~~~~~~~~~~~---~~~~------~~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATD-DPEGWIVYEEVLE---YAEG------DPDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCC-CchhHHHHHHHHH---HhCC------CCCeEEEec
Confidence 99999999999999999999998887775 48888764321 1223332233222 2111 113665433
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 003029 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (856)
Q Consensus 447 ~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~ 523 (856)
. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 499999999999999999999999999999999994 899999999999888 567998874 6789999999
Q ss_pred HHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003029 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 524 aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
++++ ++++.++.+++++++ ..++|...++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457788888888887 579999999999887764
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=246.37 Aligned_cols=273 Identities=18% Similarity=0.218 Sum_probs=203.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
...|+|++|+.. .+...++++.|++++.+.+|..|.. +.+ ..++.|.+.+.. ...++. +.
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~~-~~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQF-LKKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCHH-HHHHHH---hh
Confidence 357999999843 3445567778999999999987631 111 135777776643 333322 11
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~ 386 (856)
+ ...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||++.+|+|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578999999998876421 11233344 26789999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~ 466 (856)
.+.+++|++ .|+++|.+......+...+.+++++++.+++. .++ |.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 48888865432222334556677777665432 255 48899999999999999999999
Q ss_pred CC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeE-EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 467 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 467 S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~-lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
|. .||||++++|||||+ .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.+++++++++
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 499999999999994 899999999998887 56787 6789999999999999998764 45677777766
Q ss_pred H-HhcCHHHHHHHHHHHHHHh
Q 003029 543 V-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~ 562 (856)
+ +.++|..-++++++.|++.
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 5 7889999999998888653
No 23
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.94 E-value=6.8e-25 Score=254.82 Aligned_cols=296 Identities=23% Similarity=0.283 Sum_probs=203.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcC----CCCeEEEEEecCCC----chhhhhc--Ccc-------------cHHHHHHhhc
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFP----SSEIHRT--LPS-------------RSDLLRAVLA 287 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~fr~--lp~-------------~~~il~~ll~ 287 (856)
..|+||+||||..++|.++++.. .+.++.++.|..-. +.+.+.. +|+ ..-+..++..
T Consensus 118 ~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 118 RPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 67999999999999999998653 46899999998621 1111111 111 1112235677
Q ss_pred CCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeEEEEEeecccChhhhhhhhcCC-----------chHHHHH
Q 003029 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN-----------PVQVHIK 354 (856)
Q Consensus 288 aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~--~~g~~~~v~viP~GID~~~f~~~~~~~-----------~~~~~~~ 354 (856)
||.|...++.+++..... ..| .++. +..+..++.+||||||.+.|.+..... ...+...
T Consensus 198 ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 269 (466)
T PRK00654 198 ADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKR 269 (466)
T ss_pred cCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHH
Confidence 888877777666543210 000 0000 112345799999999999987642100 0011233
Q ss_pred HHHHHhc----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhh
Q 003029 355 ELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 430 (856)
Q Consensus 355 ~lr~~~~----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN 430 (856)
.++++++ +.++|++|||+++.||++.+++|+++++++ ++.|+++|.+ + + .+++++++++.+.+
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~---~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P---ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---HHHHHHHHHHHHCC
Confidence 4666663 568999999999999999999999998753 2557777642 1 2 23456666665543
Q ss_pred cccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c-----
Q 003029 431 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G----- 503 (856)
Q Consensus 431 ~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g----- 503 (856)
. .+.++.+. +.+.+..+|++||+||+||.+||||++.+|||+|+ .|+|+|+.+|..+.+ +
T Consensus 337 ~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~ 403 (466)
T PRK00654 337 G--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDG 403 (466)
T ss_pred C--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCC
Confidence 2 25554554 66677899999999999999999999999999994 899999999999987 3
Q ss_pred -CCeEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 504 -AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 -~~g~lVnP~d~~~lA~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
.+|++|+|.|+++++++|.++++. .++.+.++..+.+ ...++|..=++++++-++++
T Consensus 404 ~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 404 EATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 569999999999999999999863 2233444444433 25788888888887766654
No 24
>PLN02316 synthase/transferase
Probab=99.94 E-value=1.6e-24 Score=263.47 Aligned_cols=310 Identities=15% Similarity=0.121 Sum_probs=221.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecCCCchhhhhcCcccHHHHHHh
Q 003029 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV 285 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l 285 (856)
..-|-.+++..++.+.+.-...||||+||+|..++|.+++.. .+++++.+++|..-. ....+-.++
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~l 759 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKAM 759 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHHH
Confidence 444555566666555544345799999999999999999874 356899999996421 112244567
Q ss_pred hcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC--C-----c----h-HHHH
Q 003029 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVHI 353 (856)
Q Consensus 286 l~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~--~-----~----~-~~~~ 353 (856)
..||.|.--++.|++..... + . ...+..++.+||||||++.|.+.... | + . ....
T Consensus 760 ~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k 826 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAK 826 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhH
Confidence 88999999999887765431 0 0 01134578999999999988764210 0 0 0 1123
Q ss_pred HHHHHHhc----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003029 354 KELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (856)
Q Consensus 354 ~~lr~~~~----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~I 429 (856)
..++++++ +.++|++||||.+.||++.+++|+..+++. + +.|+++|.+ |+ ..++.++++++.++
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~~La~~L 894 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFVNLANQL 894 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHHHHHHHh
Confidence 34666663 568999999999999999999999998763 2 457777642 22 23456777777766
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c----
Q 003029 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---- 503 (856)
Q Consensus 430 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g---- 503 (856)
+..+.. .|.| .+..+......+|++||+||+||.+|||||+.+|||+|+ .|+|+|..+|..+.+ +
T Consensus 895 g~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~ 965 (1036)
T PLN02316 895 HSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDK 965 (1036)
T ss_pred CccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccccc
Confidence 543321 2554 445555444589999999999999999999999999994 799999999999987 2
Q ss_pred ---------CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhH
Q 003029 504 ---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 504 ---------~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~ 563 (856)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..++|..=++.++.-+..+.
T Consensus 966 ~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 966 ERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred ccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 3699999999999999999999865433444344445554 56899998998888776653
No 25
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.94 E-value=5.5e-25 Score=253.79 Aligned_cols=312 Identities=15% Similarity=0.160 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchh--hhh------------cCcccHH-
Q 003029 216 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRSD- 280 (856)
Q Consensus 216 ~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~fr------------~lp~~~~- 280 (856)
.+...+...+.+.....|+|++|+++..++..++++.. +.|+.++.|....... +.. .++.+-.
T Consensus 99 ~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T TIGR02472 99 ELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEA 177 (439)
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHH
Confidence 33344444443333346999999988777777776544 5789999997532110 000 0011100
Q ss_pred HHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh
Q 003029 281 LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF 360 (856)
Q Consensus 281 il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~ 360 (856)
....+..+|.|...+...+...+. ...+ -...++.++|+|||++.|.+....++.....+.+++..
T Consensus 178 ~~~~~~~ad~ii~~s~~~~~~~~~---~~~~-----------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 178 EEETLAHASLVITSTHQEIEEQYA---LYDS-----------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHH---hccC-----------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 112344677776665433222110 0001 12457899999999999976432221111111222211
Q ss_pred --cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHH----HHHHHHHHHHHHhhcccC
Q 003029 361 --AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGRFG 434 (856)
Q Consensus 361 --~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~----~l~~~l~~lv~~IN~~~g 434 (856)
+++++|++|||+++.||++.+|+||..+.+..+.. ++++ ++|.+. +.++++ ++.+++.+++.+++-
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~l--- 315 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVLLLIDRYDL--- 315 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHHHHHHHcCC---
Confidence 36789999999999999999999998643211111 2222 233211 111111 223334445444322
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEE
Q 003029 435 TLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 508 (856)
Q Consensus 435 ~~~~~pV~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~l 508 (856)
.+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|++
T Consensus 316 -~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~l 387 (439)
T TIGR02472 316 -YG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNGLL 387 (439)
T ss_pred -Cc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEE
Confidence 12 255 58999999999999988 99999999999999999999994 899999999999888 457999
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003029 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (856)
Q Consensus 509 VnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (856)
|+|.|++++|++|.++++++ +++.++.++.++++ +.++|..=++.+++-|
T Consensus 388 v~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 388 VDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred eCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999865 57788888888877 5688888887776644
No 26
>PRK14098 glycogen synthase; Provisional
Probab=99.94 E-value=2.2e-24 Score=251.20 Aligned_cols=322 Identities=15% Similarity=0.196 Sum_probs=218.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCC-----CchhhhhcC
Q 003029 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIHRTL 275 (856)
Q Consensus 207 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~fr~l 275 (856)
|.+....|.-.++..++.+...--..||||+||||..++|.++++.. .++|++++.|... |...+-..+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 43445556556666666654432246999999999999999998653 4789999999852 211111112
Q ss_pred ccc------------HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhh
Q 003029 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (856)
Q Consensus 276 p~~------------~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~ 343 (856)
|+. .-+-.++..||.|..-++.|++........-.|++ .+ ...+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~----~~-l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD----KV-LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH----HH-HHhcCCCeeEEeCCccccccCCc
Confidence 311 12234577889888888877765332000000110 00 11135688999999999999864
Q ss_pred hcCCch------------HHHHHHHHHHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 003029 344 LEINPV------------QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 344 ~~~~~~------------~~~~~~lr~~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
.. +.. .+....+++.++ +.++|++|||+.+.||++.+++|+.++.+. ++.|+++|.
T Consensus 272 ~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~ 344 (489)
T PRK14098 272 TD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGS 344 (489)
T ss_pred cc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeC
Confidence 21 110 011233455442 567999999999999999999999998752 356888874
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+ +. .+++++++++.+... .|.+ .+.++.+++..+|++||+||+||.+||||++.+|||+|+
T Consensus 345 G-----~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G--- 405 (489)
T PRK14098 345 G-----DK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG--- 405 (489)
T ss_pred C-----CH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC---
Confidence 2 21 234566666655321 2554 677899999999999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc------cCCeEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 487 KGVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 487 ~g~lVlSe~aG~~~~l------g~~g~lVnP~d~~~lA~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
.|+|++..+|..+.+ +.+|++|+|.|++++|++|.+++.. .++.+.++.++. ....++|..=++.+++-
T Consensus 406 -~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~l 482 (489)
T PRK14098 406 -TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQL 482 (489)
T ss_pred -CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHH
Confidence 789999999998776 3479999999999999999998742 233333333322 23678888888888776
Q ss_pred HHHh
Q 003029 559 LNDT 562 (856)
Q Consensus 559 l~~~ 562 (856)
++++
T Consensus 483 Y~~~ 486 (489)
T PRK14098 483 YREL 486 (489)
T ss_pred HHHH
Confidence 6654
No 27
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.93 E-value=1.9e-24 Score=251.65 Aligned_cols=310 Identities=22% Similarity=0.264 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCC--CCeEEEEEecCCC----chhhhhc--Cccc---------
Q 003029 216 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR--------- 278 (856)
Q Consensus 216 ~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~fr~--lp~~--------- 278 (856)
..++..++.+...-...|+||+||+|..++|.+++.... ++|+.++.|...+ +.+.+.. +|+.
T Consensus 113 ~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
T TIGR02095 113 FFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEF 192 (473)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhc
Confidence 344444444443333579999999999999999987754 3899999998642 1222221 1210
Q ss_pred ----HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeEEEEEeecccChhhhhhhhcCC-----
Q 003029 279 ----SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN----- 347 (856)
Q Consensus 279 ----~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~--~~g~~~~v~viP~GID~~~f~~~~~~~----- 347 (856)
.-+..++..||.|...++.+++..... ..| .++. +..+..++.+||||||.+.|.+.....
T Consensus 193 ~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~ 264 (473)
T TIGR02095 193 YGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANY 264 (473)
T ss_pred CCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCc
Confidence 012235667788777777666554321 000 0010 011345789999999999987642100
Q ss_pred -----c-hHHHHHHHHHHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHH
Q 003029 348 -----P-VQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 416 (856)
Q Consensus 348 -----~-~~~~~~~lr~~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~ 416 (856)
+ -......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+. +
T Consensus 265 ~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~----~--- 331 (473)
T TIGR02095 265 SADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD----P--- 331 (473)
T ss_pred CccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC----H---
Confidence 0 0112334666653 6789999999999999999999999987542 5688776421 2
Q ss_pred HHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCC
Q 003029 417 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (856)
Q Consensus 417 ~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a 496 (856)
.+++++++++.+.+. .+.+ .+..+.+++..+|++||++++||.+||||++.+|||+|+ .|+|+|..+
T Consensus 332 ~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~~g 398 (473)
T TIGR02095 332 ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRRTG 398 (473)
T ss_pred HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEccCC
Confidence 244566666544221 2554 455688889999999999999999999999999999994 899999999
Q ss_pred Cchhhc--c------CCeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 497 GAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 497 G~~~~l--g------~~g~lVnP~d~~~lA~ai~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
|..+.+ + .+|++++|.|++++|++|.++|.+ .++.+.++.++.. .+.++|..-++.+++-+++
T Consensus 399 g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 399 GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 999988 4 679999999999999999999873 3345555544443 2578888888888776653
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.93 E-value=4.6e-24 Score=243.57 Aligned_cols=277 Identities=17% Similarity=0.126 Sum_probs=203.2
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCch-hhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS-EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~-e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
+.|+|++|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....+.+..
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 4699999988776667777663 22445677888652211 1110 01112233345789988877654443321
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
+|. ...++.++|+|||++.|.+.... ...+...|++|||+.+.||++.+|+|++.+
T Consensus 192 -~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 121 23578899999999988643110 113456799999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+++|++ .|+++|. ++.. +++++++.+.+. .+.+.|.|.++++++..+|+.||+||+||.
T Consensus 248 ~~~~~~~----~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVAF----RYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCCE----EEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 8877764 4877763 3433 344445444322 133446899999999999999999999998
Q ss_pred C------cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 469 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 469 ~------EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
. ||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++++++++.++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999994 899999999999988 56899999999999999999999967778888899998
Q ss_pred HHH-HhcCHHHHHHHHHHHHHH
Q 003029 541 THV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 541 ~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
+++ ..+++...++.+.+-+++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHhh
Confidence 887 668999988888776653
No 29
>PRK14099 glycogen synthase; Provisional
Probab=99.93 E-value=7.3e-24 Score=246.55 Aligned_cols=296 Identities=21% Similarity=0.236 Sum_probs=199.6
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecC-----CCchhhhh--cCccc-------------HHHHHHhhcCC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHR--TLPSR-------------SDLLRAVLAAD 289 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~fr--~lp~~-------------~~il~~ll~aD 289 (856)
..||||+||||..++|.+++.. ..+++++++.|.. ||. ..+. .+|+. .-+-.++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 4699999999999999998743 3567899999974 221 1111 11110 01334466778
Q ss_pred EEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCC-----ch------HHHHHHHHH
Q 003029 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN-----PV------QVHIKELQE 358 (856)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~-----~~------~~~~~~lr~ 358 (856)
.|.-.++.+++.....- .-.|++ + .+..+..++.+||||||++.|.+..... .. ......+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~----~-~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLD----G-LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChH----H-HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 87777776665432100 000000 0 0111345789999999999997643210 00 011234566
Q ss_pred Hhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003029 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (856)
Q Consensus 359 ~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (856)
+++ +.++|++||||.+.||++.+++|+..+++. ++.|+++|.+ + + .+++++++++.+...
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~-- 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG-- 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC--
Confidence 552 356888999999999999999999998753 2457777642 1 2 244556666544221
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c-------
Q 003029 434 GTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 503 (856)
Q Consensus 434 g~~~~~pV~~~~g~v~~~el~aly-~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g------- 503 (856)
.+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|+ .|+|+|..+|..+.+ +
T Consensus 351 ------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 351 ------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 24445675 57888887 56999999999999999999999994 688999999998877 2
Q ss_pred --CCeEEECCCCHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 504 --AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 504 --~~g~lVnP~d~~~lA~ai~~a---L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
.+|++|+|.|++++|++|.++ +++ ++.+.++.++.+ ...++|..=++++++-++++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 369999999999999999984 443 445555555544 467888888888887776654
No 30
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.93 E-value=2.9e-23 Score=236.27 Aligned_cols=289 Identities=19% Similarity=0.193 Sum_probs=212.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhh---cCcc--cHHHHH--HhhcCCEEEEeCHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLLR--AVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr---~lp~--~~~il~--~ll~aDlIgf~t~~~~~~Fl 303 (856)
..|+|++|++....++.++++. .+.|+.+++|..++-...+. ..+. ...+++ .+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999987666566665543 46789999997542111110 0111 122222 34578999999987777664
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~ 380 (856)
. ..+. ...++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+..
T Consensus 180 ~----~~~~-----------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 R----HYDA-----------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred H----HcCC-----------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3 1121 235788999999998886431 11233444 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCCh-HHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~-~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
+++|++.+++++|+. ++.|+++|.+.. ++ +... ++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~~----~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATPD----ALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHHH----HHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999988873 477888886542 23 3333 344444443321 1255 5899999999999999
Q ss_pred ccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 460 ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
||++++||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++ +.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 899999999988877 56799999999999999999999854 46677777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
++++.++.++|..-++.+++-+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 8888888899999999888777654
No 31
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.93 E-value=8.6e-24 Score=240.38 Aligned_cols=284 Identities=17% Similarity=0.186 Sum_probs=197.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCc--hhh-hh-cCccc--------HH---HHHHhhcCCEEEEeC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-fr-~lp~~--------~~---il~~ll~aDlIgf~t 295 (856)
..|+|+.| +.+....++++..|++++..++|..+-. .+. |. ..+.+ .. ....+..+|.|...+
T Consensus 87 ~pdvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 35999999 4556667789989999988777643311 110 10 11111 11 224566788887766
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeec-
Q 003029 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 371 (856)
Q Consensus 296 ~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~R- 371 (856)
......|.. . + ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----~-----------~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----E-----------L---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----h-----------h---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 543333221 0 1 1478899999999988754211 11111111 36788999998
Q ss_pred ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHH---HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 003029 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE---YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (856)
Q Consensus 372 ld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~---~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 448 (856)
+.+.||++.+|+|+..+.+++|+++ |+++|......+.. -..++++ ++.+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---cceEE-EeCCC
Confidence 9999999999999999998888754 88887532110000 0011111 2222222111 12355 58999
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 449 ~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
+.+++.++|+.||++++||..||+|++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999994 899999999998888 468999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 003029 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (856)
Q Consensus 527 ~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (856)
++ +++.++.+++++++.+ +++..-++.++
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5788888889999876 77776666654
No 32
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.92 E-value=1.1e-22 Score=242.49 Aligned_cols=331 Identities=14% Similarity=0.152 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC----chh-hhhcCc------cc
Q 003029 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSE-IHRTLP------SR 278 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~-~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e-~fr~lp------~~ 278 (856)
|..-..+....++.+.... ...|+|+.|.+.--+++..++++. +++..++.|..-. ... .+.... .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555555555555554333 246999999988878888887765 6787777785411 000 000010 00
Q ss_pred -HHHHHHhhcCCEEEEeCHHHHHHHHHHHH-----HHhCccc---CCCceeeCCeeEEEEEeecccChhhhhhhhcCCch
Q 003029 279 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 349 (856)
Q Consensus 279 -~~il~~ll~aDlIgf~t~~~~~~Fl~~~~-----~~lg~~~---~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~ 349 (856)
..-+..|-.||.|.-.|+.....-...+. ..++... .-+++.. ...|+.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 00124577899999888754321111111 0001000 0011111 23488999999999999764321100
Q ss_pred -HHHH----------HHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC---
Q 003029 350 -QVHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 410 (856)
Q Consensus 350 -~~~~----------~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~--- 410 (856)
.... ...++.+ .++++|++|||+++.||+..+++||.++.+.. ..+.|++||++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccc
Confidence 0000 0112222 36789999999999999999999998764332 34668888864321
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----HccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~----~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
...+.....+++.+++.+.+- .+ .|.| .|. .+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc--- 666 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC--- 666 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc---
Confidence 111222334556666665432 12 3665 564 36666777776 247999999999999999999999
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003029 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (856)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (856)
|.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++..+++++| +.++|...++++++..
T Consensus 667 -GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 667 -GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred -CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4999999999999988 678999999999999999999874 34557777778888887 6789999998887655
No 33
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.92 E-value=5.4e-23 Score=239.38 Aligned_cols=312 Identities=22% Similarity=0.256 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcC-----CCCeEEEEEecCCCch----hhhhc--Ccc---
Q 003029 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS--- 277 (856)
Q Consensus 212 ~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~fr~--lp~--- 277 (856)
..|...++...+.+.+.-...|+||+||+|..++|.+++... .+.++.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 344444555555554443467999999999999999998763 5789999999874321 11111 111
Q ss_pred ----------c-HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeEEEEEeecccChhhhhhhh
Q 003029 278 ----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRAL 344 (856)
Q Consensus 278 ----------~-~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~--~~g~~~~v~viP~GID~~~f~~~~ 344 (856)
. .-+..++..||.|...++.+++...+. .. ..++. ...+..++.+||||||.+.|.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~ 261 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPAT 261 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCccc
Confidence 0 122334667788777777666554320 00 00110 112346899999999999887643
Q ss_pred cCC-----------chHHHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC
Q 003029 345 EIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 408 (856)
Q Consensus 345 ~~~-----------~~~~~~~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~ 408 (856)
... .-......+++++ .++++|+++||+.+.||++.+++|++.+.++. +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 334 (476)
T cd03791 262 DPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG- 334 (476)
T ss_pred cchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC-
Confidence 211 0011223456655 36789999999999999999999999987642 557777642
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCc
Q 003029 409 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (856)
Q Consensus 409 r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g 488 (856)
+ + .+.+.+++++.+.. ..++++.+ .+.+++..+|+.||++++||.+||||++.+|||+|+ .
T Consensus 335 --~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~ 395 (476)
T cd03791 335 --D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG----T 395 (476)
T ss_pred --C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----C
Confidence 1 2 23455555554421 13665554 457888899999999999999999999999999994 8
Q ss_pred eEEEeCCCCchhhc--cC------CeEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 489 VLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 489 ~lVlSe~aG~~~~l--g~------~g~lVnP~d~~~lA~ai~~aL~~~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.++.++ ..++|..-++++++.
T Consensus 396 pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 396 VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHH
Confidence 99999999999988 34 799999999999999999998643 3344444444332 357777777777665
Q ss_pred H
Q 003029 559 L 559 (856)
Q Consensus 559 l 559 (856)
+
T Consensus 474 y 474 (476)
T cd03791 474 Y 474 (476)
T ss_pred H
Confidence 4
No 34
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.91 E-value=1.3e-22 Score=235.82 Aligned_cols=278 Identities=18% Similarity=0.218 Sum_probs=199.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-H---HHHHH-hhcCCEEEEeCHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 305 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-~---~il~~-ll~aDlIgf~t~~~~~~Fl~~ 305 (856)
+.|+||+|+...+.++.++-.+..++|+.+.+|.-+|.........+. + .+.+. ...+|.|...+....+.+..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766555544433344688888888755432110011110 0 11122 23578888887766655532
Q ss_pred HHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh----cCCceEEEeecccccCChHHH
Q 003029 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 306 ~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIl~V~Rld~~KGi~~~ 381 (856)
.+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++||+.+.||++.+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 111 013478899999999988754221 1223333 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|++++ |+ +.|+++| +++.. +++++++.. .+|+| .|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG-----~G~~~----~~l~~~~~~----------~~V~f-~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVG-----DGPYR----EELEKMFAG----------TPTVF-TGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEe-----CChHH----HHHHHHhcc----------CCeEE-eccCCHHHHHHHHHHCC
Confidence 9988754 54 4588776 33433 344444332 13664 89999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++ ++.+.++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999994 899999999998877 3579999999999999999999985 45777888
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH-HHHhH
Q 003029 537 WHNFTHVTTHTAQEWAETFVSE-LNDTV 563 (856)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~-l~~~~ 563 (856)
+++++++++++|...++.++.. ...+.
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999874 55543
No 35
>PLN00142 sucrose synthase
Probab=99.91 E-value=2.2e-22 Score=239.96 Aligned_cols=330 Identities=15% Similarity=0.118 Sum_probs=208.6
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCC-----------Cchh-hhhcC-c
Q 003029 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-----------PSSE-IHRTL-P 276 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~-~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~Pf-----------P~~e-~fr~l-p 276 (856)
|..-..++...++.+.... ..+|+|+.|++.--+++..++++. ++|.+++.|.-- ...+ -++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 5555555555655554333 246999999877778888887765 688888888421 1000 11100 0
Q ss_pred ccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCc--ccC-C------CceeeCCeeEEEEEeecccChhhhhhhhcCC
Q 003029 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF--EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEIN 347 (856)
Q Consensus 277 ~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~--~~~-~------~~v~~~g~~~~v~viP~GID~~~f~~~~~~~ 347 (856)
...+ ...|..||.|...|+......-..+.. ++. ..+ + +++... ..++.++|+|+|...|.+.....
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~q-y~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~ 541 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQ-YESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQ 541 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhh-hhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHH
Confidence 0011 224556777765554433211000000 000 000 0 111111 22788999999999887532110
Q ss_pred --------chHHHH---HHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC-CC
Q 003029 348 --------PVQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RT 410 (856)
Q Consensus 348 --------~~~~~~---~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~-r~ 410 (856)
.+.+.. ...++.+ .++++|++|||+++.||+..+|+||.++.+..++ +.|++||++. ..
T Consensus 542 ~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~ 617 (815)
T PLN00142 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPS 617 (815)
T ss_pred hhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCcccc
Confidence 000000 0011112 3567999999999999999999999988665544 5688888641 11
Q ss_pred C--hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHhhcC
Q 003029 411 D--VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQD 484 (856)
Q Consensus 411 ~--~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---g~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~lEama~~~ 484 (856)
. ..+..+..+++.+++.+.+-. + .|.|+. +.++.++++.+|+ ++|+||+||.+||||++++|||||
T Consensus 618 ~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~-- 689 (815)
T PLN00142 618 KSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTC-- 689 (815)
T ss_pred ccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHc--
Confidence 1 111112224455666554321 1 255432 2455678888777 579999999999999999999999
Q ss_pred CCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHH
Q 003029 485 LKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSE 558 (856)
Q Consensus 485 ~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~ 558 (856)
|.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.+++. .+++.+.++.+++++++ +.++|...++++++-
T Consensus 690 --GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L 767 (815)
T PLN00142 690 --GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTL 767 (815)
T ss_pred --CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4899999999999988 678999999999999999987653 35667788888888887 679999999888774
Q ss_pred H
Q 003029 559 L 559 (856)
Q Consensus 559 l 559 (856)
.
T Consensus 768 ~ 768 (815)
T PLN00142 768 G 768 (815)
T ss_pred H
Confidence 4
No 36
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.91 E-value=3.6e-22 Score=227.28 Aligned_cols=297 Identities=14% Similarity=0.119 Sum_probs=205.1
Q ss_pred CCCEEEEeCccchhH-HHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+|++|+++.... ...+..+..+.|+++..|..|+..+... .+...+.+. +-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775433 2333334456889999998765322111 011122222 446888888887655543221
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
.+ ....++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~~-----------~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -AS-----------LDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -hC-----------CChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 01 124578899999999988653210 124678999999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+++|++ .|+++|. ++.... +++++.+.+. .+ .|.+ .|.++.+++..+|+.||++++||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~----l~~~~~~~~l----~~--~v~~-~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRIL----LEEMREKYNL----QD--RVEL-LGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHH----HHHHHHHhCC----CC--eEEE-eCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888875 4777763 333333 3444443321 11 2554 799999999999999999999999
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCC-eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHhc
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~-g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~-v~~~ 546 (856)
.||||++++|||||+ .|+|+|..+|..+.+.++ ++++ +.|+++++++|.+++.++. ++..+..+.++. .+.+
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~-~~~~~~l~~~l~~~l~~~~-~~~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLA-EPDVESIVRKLEEAISILR-TGKHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeec-CCCHHHHHHHHHHHHhChh-hhhhHHHHHHHHHHhhC
Confidence 999999999999994 899999999999988444 4445 4499999999999998765 333444555554 4778
Q ss_pred CHHHHHHHHHHHHHHhHHhhhhccccCCCCcchHHHHHHHHhcC
Q 003029 547 TAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSN 590 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~ 590 (856)
++..=++++++.+++.... + ...+ ...+...|....
T Consensus 353 s~~~~~~~~~~~y~~l~~~-~------~~~~-~~~~~~~~~~~~ 388 (398)
T cd03796 353 SWEDVAKRTEKVYDRILQT-P------NLSL-LERLKRYYSCGP 388 (398)
T ss_pred CHHHHHHHHHHHHHHHhcC-C------Ccch-HHhhhhhcccCc
Confidence 9998899988888775432 1 0122 556666666543
No 37
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.91 E-value=4e-22 Score=224.96 Aligned_cols=287 Identities=22% Similarity=0.214 Sum_probs=205.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhh-----hcCcccHHH-HHHhhcCCEEEEeCHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH-----RTLPSRSDL-LRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f-----r~lp~~~~i-l~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
..|+||+|++...+.+.++++ ..+.|+.+.+|..+|..... ........+ ...+..+|.|...+....+.+..
T Consensus 83 ~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 479999999887766655543 45788999999865521110 000001111 22355789888888766555542
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~ 381 (856)
. .-+. ...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||++.+
T Consensus 162 ~---~~~~-----------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~l 219 (388)
T TIGR02149 162 Y---YPDL-----------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHL 219 (388)
T ss_pred H---cCCC-----------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHH
Confidence 1 0011 235788999999998876421 11233444 356799999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|++++. ++ +.|+++|++. +.+ ++.+++++.+..++... ..|+++.+.++.+++..+|+.||
T Consensus 220 i~a~~~l~---~~----~~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 220 LDAVHYIP---KD----VQVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred HHHHHHHh---hc----CcEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCC
Confidence 99999873 23 3466665322 112 33445555554443321 13777788999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH------HHHHHHHHHHHcCCHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEERE 533 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~------~~lA~ai~~aL~~~~~er~ 533 (856)
++|+||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|+ ++++++|.++++. ++++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999994 899999999999887 457999999998 9999999999985 45777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003029 534 KRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (856)
++..++++.+ +.++|..+++++++.++++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 7778888776 6799999999998877653
No 38
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.91 E-value=2.7e-22 Score=233.71 Aligned_cols=283 Identities=19% Similarity=0.159 Sum_probs=199.6
Q ss_pred HHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch---hhhhc---CcccHH--------HHH-HhhcC
Q 003029 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LLR-AVLAA 288 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~fr~---lp~~~~--------il~-~ll~a 288 (856)
.+...+.+.|+||+|......++..+..+..+.|+.++.|.-++.. +++.. .+..+. +.+ .+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444556789999998665555555544556789999999765422 22211 001111 111 12356
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEE
Q 003029 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 368 (856)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~ 368 (856)
|.|...+....+... . ++....++.++|||||.+.|.+.... ....+.++|++
T Consensus 246 d~Ii~~s~~~~~~~~-----~-----------~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI-----E-----------DGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH-----H-----------cCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 777665543322211 1 11234578899999999988753210 11246789999
Q ss_pred eecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 003029 369 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (856)
Q Consensus 369 V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 448 (856)
+||+.+.||+..+|+|+..+.++.|++ .|+++|... . .+ .+.+++++++.+++.. ..|.| .|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~-~~---~~~~e~~~li~~l~l~------~~V~f-~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-E-DP---EYAEECRELVESLGLE------DNVKF-TG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-c-Ch---HHHHHHHHHHHHhCCC------CeEEE-cC--
Confidence 999999999999999999998888875 477776421 1 12 3455666676665432 13554 66
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccC--------CeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~--------~g~lVnP~d~~~lA~a 520 (856)
.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|+.+.+.. +|++++|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999994 89999999999888743 7999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Q 003029 521 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 557 (856)
Q Consensus 521 i~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 557 (856)
|.+++++ ++.+.++.+++++++.+ +++...+++|.+
T Consensus 436 i~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999986 45778888888888866 566777776655
No 39
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.91 E-value=8.3e-22 Score=222.17 Aligned_cols=295 Identities=21% Similarity=0.241 Sum_probs=207.6
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhc-----Ccc-cHHH-HHHhhcCCEEEEeC
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----LPS-RSDL-LRAVLAADLVGFHT 295 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~-----lp~-~~~i-l~~ll~aDlIgf~t 295 (856)
..+.+.....|+|++|++....++..+.+. .+.++.+..|........... .+. +..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 334333336799999998777666666544 468888888875432110000 000 0111 22355789999888
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeeccccc
Q 003029 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 375 (856)
Q Consensus 296 ~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~ 375 (856)
......+.. ..+ ....++.++|+|+|.+.|.+..... .....+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~----~~~-----------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYS----LYG-----------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHH----Hcc-----------ccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 766555543 111 1233588999999998876532111 1111111 11467899999999999
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHH
Q 003029 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (856)
Q Consensus 376 KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~a 455 (856)
||+..+++|+..+.++.|++ .|+++|.......+ ....++++++.+.+.. ..+. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRERA----NLVIVGGPRDDILA---MDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcchh---hhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 99999999999998877764 58888764422211 2223455555443321 1244 589999999999
Q ss_pred HHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 456 ly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++++.
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999999999994 899999999999888 4579999999999999999999986 45777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHH
Q 003029 534 KRHWHNFTHV-TTHTAQEWAETFV 556 (856)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl 556 (856)
++..++++++ +.++++..++.++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7888888888 8899999888775
No 40
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.90 E-value=9.2e-22 Score=221.39 Aligned_cols=232 Identities=16% Similarity=0.179 Sum_probs=174.0
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCc
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 364 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 364 (856)
.+|.+...+....+.+.. .++. ...++.++|+|||++.|.+..... ....++.+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~~-----------~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVKV-----------PPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcCC-----------ChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCe
Confidence 367777777765554432 1121 235788899999998886432111 11111222 3577
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 003029 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (856)
Q Consensus 365 iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (856)
+|+++||+++.||+..+++|+..+.++.|+...++.|+++|. ++.. +++++.+.+.+. ...++|
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999999887655688988873 2322 233444433322 234556
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHH
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~ 522 (856)
.|. .+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 774 5789999999999999999999999999999994 899999999999988 56799999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003029 523 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 523 ~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
+++++ ++++..+.+++++++ ..+++..-++++++-+++
T Consensus 334 ~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99985 446777888888887 689999888888776654
No 41
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.90 E-value=2.2e-21 Score=216.69 Aligned_cols=275 Identities=16% Similarity=0.127 Sum_probs=194.9
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCc--hhhhhcCcc--cHHHHH-HhhcCCEEEEeCHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLR-AVLAADLVGFHTYDYA 299 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~fr~lp~--~~~il~-~ll~aDlIgf~t~~~~ 299 (856)
+.+..+ .|+||+|+.........+.+ ..++|+.+.+|..... .......++ ...+.+ .+..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 49999997654443333332 3467888888853211 111110011 112222 2346899988886555
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChH
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~ 379 (856)
+.+... +. ...++.++|+|+|.+.|.+... ..+++.|+++||+.+.||++
T Consensus 155 ~~~~~~-----~~-----------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLAL-----GF-----------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHHc-----CC-----------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 444321 21 2347889999999988764311 12467899999999999999
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 380 ~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
.+++|+..+.+++|++ .|+++|. ++. .+++++++.+.+.. ..|. +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998887764 4887763 232 23445554443211 1254 5899999999999999
Q ss_pred ccEEEECCC------CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 460 ADv~v~~S~------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
||++++||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999994 899999999998887 56799999999999999999999854 46
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHH
Q 003029 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (856)
Q Consensus 532 r~~r~~~~~~~v-~~~~~~~W~~~fl 556 (856)
+.++..++++++ ..+++..+++.+.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777778888887 5789998888764
No 42
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.90 E-value=5.4e-23 Score=212.51 Aligned_cols=192 Identities=21% Similarity=0.362 Sum_probs=144.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEE
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i 672 (856)
||++|+||||+++. ..+++++++++|++|++ .|+.|+|+|||+...+..+++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLRE-AGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 58999999999862 24689999999999997 57999999999999999999988889999999999
Q ss_pred EecCC-eeeecccccCChH---HHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCC-
Q 003029 673 RCTTG-KWMTTMPEHLNME---WVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 747 (856)
Q Consensus 673 ~~~~~-~w~~~~~~~~~~~---w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~- 747 (856)
+..++ .|.. +...... +.+.+..+++.+....++..++.+...+.++|+.... ......++...+ .....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 86433 3432 1111111 1233344455556667788888899999999986511 111223344444 32221
Q ss_pred CCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 748 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 748 ~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
...+.++ ++..++||+|++++||.|++.++++++ ++.+++++||| +.||++| |+.+
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~-~~~~ 198 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEM-FEVA 198 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHH-HHHc
Confidence 2457777 588999999999999999999999998 56899999999 9999999 8866
No 43
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.89 E-value=4.6e-21 Score=219.65 Aligned_cols=291 Identities=11% Similarity=0.002 Sum_probs=191.1
Q ss_pred HHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeE-EEEEecCCCchhhhhcCcccHHHH----HHhhcCCEEEEeCHHH
Q 003029 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLL----RAVLAADLVGFHTYDY 298 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~fr~lp~~~~il----~~ll~aDlIgf~t~~~ 298 (856)
.++...+ .|+||.|++...+++.+..... ..++ ....|. +++.. ++.++ ..+..++++.-.+. +
T Consensus 274 ~~ir~~r-pDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 274 PHLCERK-LDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHHcC-CCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 3344444 4999999999877766665544 3444 455665 33211 11111 12334455443332 3
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCC
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KG 377 (856)
+.+.....+.+.. .+.....++.+||||||++.|.+....+ ......++..+ .+.++|++|+|+.+.||
T Consensus 343 v~~s~~v~~~l~~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 343 MSNNHCVTRHYAD--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred hhccHHHHHHHHH--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 2222211111100 0112456899999999999887642111 11112222223 35578899999999999
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
...+|+|+.+++++.|++ .|+++|. ++.. +++++++.+.+.. ..|+| .|+ .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdi----rLvIVGd-----G~~~----eeLk~la~elgL~------d~V~F-lG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPAT----RFVLVGD-----GDLR----AEAQKRAEQLGIL------ERILF-VGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCe----EEEEEeC-----chhH----HHHHHHHHHcCCC------CcEEE-CCC--hhhHHHHH
Confidence 999999999999888875 4887863 3332 3455555443321 13554 676 46899999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCC--HHHHH
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEERE 533 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~--~~er~ 533 (856)
+.||+||+||.+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+.
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~ 546 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRT 546 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999994 899999999999987 67899999999999988874332211 22444
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003029 534 KRHWHNFTHV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
.+.+++++++ +.|++..-++.+++.++.
T Consensus 547 ~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 547 GICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 5667788887 568999888888877664
No 44
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.89 E-value=4.2e-21 Score=216.99 Aligned_cols=283 Identities=17% Similarity=0.149 Sum_probs=190.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHH---------HHhhcCCEEEEeCHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL---------RAVLAADLVGFHTYDYAR 300 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il---------~~ll~aDlIgf~t~~~~~ 300 (856)
...|+|++|+..... + +++... ..++.+.+|.| .......-...+.+. ..+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999999866432 2 233333 38899999954 221111001111111 113457888776654433
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHH
Q 003029 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 301 ~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~ 380 (856)
.+.. .++.. ....+.++|+|||.+.|.+....+ .........+..+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~~----------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPSL----------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhccc----------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 11100 112345889999998886532111 0011111257789999999999999999
Q ss_pred HHHHHHHHHHhC---cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHH-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003029 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (856)
Q Consensus 381 ~L~Af~~~l~~~---P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~g~v~~~el~al 456 (856)
+|+|++++.+++ |+ +.|+++|.+... .++...+.+++++++.+ .+.. ..|+ |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998876 55 558888754321 12222344556666554 3221 1355 4899999999999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 003029 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (856)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~ 534 (856)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++++. ++.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHH
Confidence 999999999999999999999999994 899999999988888 457999977 99999999999998764 6777
Q ss_pred HHHHHHHHH-HhcCHHHHHHH
Q 003029 535 RHWHNFTHV-TTHTAQEWAET 554 (856)
Q Consensus 535 r~~~~~~~v-~~~~~~~W~~~ 554 (856)
+.+++++++ ..+++...++.
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 888888877 56787777654
No 45
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.89 E-value=4.5e-21 Score=212.73 Aligned_cols=281 Identities=20% Similarity=0.255 Sum_probs=198.3
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHH
Q 003029 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 226 ~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~ 304 (856)
++..+ .|+||+|.+|..++..+++...+..++....|...+...+ +..+.+. ...++.+...+....+.|+.
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 33444 5899999999888888887777777888888864321111 0111111 11245554455544444432
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~ 381 (856)
. + .-...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+
T Consensus 148 ~-----~----------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 S-----K----------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred c-----c----------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 1 0 01235788999999988875431 1223355554 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|+.++.+++|++ .|+++|. ++.... +.+.+.+.+.. ..|.+ .|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVKL-LGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhc
Confidence 99999998888765 4777763 232223 33344333321 12554 5654 68999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
++++||..||||++++|||||+ .|+|+|+.+|..+.+.++|.+++|.|++++|++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999994 899999999998888668999999999999999999998777676666665333
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 003029 542 HVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l~ 560 (856)
..+.+++..+++.+++-+.
T Consensus 341 ~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 341 IVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHhcCHHHHHHHHHHHhh
Confidence 4578999999998887553
No 46
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.89 E-value=4e-21 Score=220.26 Aligned_cols=273 Identities=18% Similarity=0.186 Sum_probs=185.1
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcC-------------cccH--HH-----------H--H
Q 003029 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------L--R 283 (856)
Q Consensus 232 ~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~l-------------p~~~--~i-----------l--~ 283 (856)
+|+|..|--+...+ .+.+..+++|+++.+|.|.-+++.+..+ ..+. .+ + .
T Consensus 108 pDv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 58665553233323 2444556889999999654455544221 1111 01 1 1
Q ss_pred HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 003029 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (856)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (856)
.+-.||.|...+.....++.+ .. +...++.++|+|+|.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 234678877766544434321 11 11136789999999988754311 012356
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~-~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (856)
++|++|||+.+.||+..+|+||..+.+..|+. +.++.|+++|...... ..++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC------CeEE
Confidence 79999999999999999999999999888752 1246788887532111 123445666666654431 1255
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHH
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~l-----g~~g~lVnP~d~~~ 516 (856)
|.+.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5789999999999999999999999999999999999994 8899999888654 34 45799974 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003029 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (856)
Q Consensus 517 lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 550 (856)
+|++|.++++++++++..+.+..+...+.+++..
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999988666665455455556666544
No 47
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.89 E-value=2.3e-22 Score=216.29 Aligned_cols=201 Identities=15% Similarity=0.236 Sum_probs=136.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliae 667 (856)
.+|+|++|+||||+++ +..++++++++|++|.+ +|+.|+|+|||+...+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 5799999999999998 45699999999999986 7999999999999999999999964 69999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--CCCcEEeeecce------------EEE-----EeecC---
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETS------------LVW-----NYKYA--- 725 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--t~gs~ie~k~~s------------i~~-----~y~~~--- 725 (856)
||++|...++. +.....+ .+.+..+++..... ....+....... ... .....
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975332 2222334 45555555544222 111111110000 000 00000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCc-EEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 726 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 726 d~------e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~-~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
+. ........++.+.+ .+.+....+.+.++.. ++||.|+|+|||.|+++|++++| ++.++||||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011223333344 3333333455666654 49999999999999999999999 66889999999
Q ss_pred CCcccccccccccccCcceEEeCCC
Q 003029 799 FLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 799 ~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
+.||++| |+++ +.+|.++|.
T Consensus 214 -~~ND~~M-l~~a---g~gvam~Na 233 (264)
T COG0561 214 -STNDIEM-LEVA---GLGVAMGNA 233 (264)
T ss_pred -ccccHHH-HHhc---CeeeeccCC
Confidence 9999999 9865 788888886
No 48
>PLN02949 transferase, transferring glycosyl groups
Probab=99.89 E-value=9.9e-21 Score=218.56 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=195.3
Q ss_pred CEEEEeCcc-chhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcc-------------------cHHH-------HH--
Q 003029 233 DVVWCHDYH-LMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-------------------RSDL-------LR-- 283 (856)
Q Consensus 233 DvIwvHDyh-l~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~-------------------~~~i-------l~-- 283 (856)
+.|||-.-- ...+| ++| ....||++.+|.|.-+.+....+-. .+.+ +.
T Consensus 140 p~v~vDt~~~~~~~p-l~~--~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~ 216 (463)
T PLN02949 140 PLYFFDTSGYAFTYP-LAR--LFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGL 216 (463)
T ss_pred CCEEEeCCCcccHHH-HHH--hcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHH
Confidence 357874322 12223 233 3368999999988766644432210 0110 11
Q ss_pred HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 003029 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (856)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (856)
.+..+|.|...+.-..+++.+ ..+ ...++.++++|+|.+.|..... ....++
T Consensus 217 ~~~~ad~ii~nS~~t~~~l~~----~~~------------~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~ 268 (463)
T PLN02949 217 VGRCAHLAMVNSSWTKSHIEA----LWR------------IPERIKRVYPPCDTSGLQALPL------------ERSEDP 268 (463)
T ss_pred HcCCCCEEEECCHHHHHHHHH----HcC------------CCCCeEEEcCCCCHHHcccCCc------------cccCCC
Confidence 124578777665543333321 111 1236778999999877632110 001356
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
+++++|||+.+.||+..+|+||.++.++.++-..++.|+++|... . ++..++.+++++++.+.+-. + .|.|
T Consensus 269 ~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~-~--~~~~~~~~eL~~la~~l~L~----~--~V~f 339 (463)
T PLN02949 269 PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCR-N--KEDEERLQKLKDRAKELGLD----G--DVEF 339 (463)
T ss_pred CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCC-C--cccHHHHHHHHHHHHHcCCC----C--cEEE
Confidence 789999999999999999999999887544222245688888542 1 11123344556666554321 1 2664
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEV 517 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~l-----g~~g~lVnP~d~~~l 517 (856)
.|.++.+++.++|+.||+++.||..||||++++|||||+ .|+|+|..+|..+ .+ |.+|++++ |++++
T Consensus 340 -~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~l 412 (463)
T PLN02949 340 -HKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEY 412 (463)
T ss_pred -eCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHH
Confidence 799999999999999999999999999999999999994 8999999988753 33 34688874 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 518 ANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 518 A~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
|++|.++++++++++.++.+++++.+.+++++.-++++++.++...
T Consensus 413 a~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 413 ADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999998888888888999999999999998888888777653
No 49
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.89 E-value=1.4e-20 Score=210.48 Aligned_cols=277 Identities=16% Similarity=0.164 Sum_probs=194.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcC---CCCeEEEEEecCCCchhhhhcCcccH-HHHHHhhcCCEEEEeCHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRS-DLLRAVLAADLVGFHTYDYARHFVSAC 306 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~---~~~~i~~flH~PfP~~e~fr~lp~~~-~il~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (856)
..|+|++|.+....++.++..+. .+.++.+.+|..-.. ....-+... -+...+..+|.|...+......+...
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~- 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL- 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh-
Confidence 45999999876555555544322 267888888853111 011111122 22334567999999888766555431
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
. +...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 161 ---~------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 161 ---F------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ---c------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 1 12346889999999887754211 1122333 36789999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+..+.++ ++ +.|+++|.+ ++...+ ++++.+.+.. ..|.+ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~----~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPA----ERLARELGLQ------DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHH----HHHHHHcCCC------ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988654 33 347777642 222233 3333332211 12554 5654 5799999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
++||..||||++++|||+|+ .|+|+|+.+|.++.+ |.+|++++|.|++++|++|.+++++ ++++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 99999999999999999994 899999999999888 5679999999999999999999985 4477777788888
Q ss_pred H-HHhcCHHHHHHHHHHHHHH
Q 003029 542 H-VTTHTAQEWAETFVSELND 561 (856)
Q Consensus 542 ~-v~~~~~~~W~~~fl~~l~~ 561 (856)
. ...+++...++.+++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5778999998888876654
No 50
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.88 E-value=7e-21 Score=227.37 Aligned_cols=280 Identities=14% Similarity=0.092 Sum_probs=185.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEE-EEecCCCc---hhhhhcCcccHHHHHHhhcCCEEEEe--CHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPFPS---SEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~-flH~PfP~---~e~fr~lp~~~~il~~ll~aDlIgf~--t~~~~~~Fl~ 304 (856)
..|||++|++.-..+..+..... .+|+.+ .+|+ +|. .+.++. ....+...+..++.+.+. +....+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~ 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH
Confidence 35999999998877766665433 455544 4565 221 121110 011122333334433332 2222222221
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc-CCceEEEeecccccCChHHHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
.++ ....++.++|||||++.|.+. +........++.... +.++|++|||+++.||+..+|+
T Consensus 476 ----~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 476 ----WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred ----HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 112 134588999999999888542 211111122222222 4668999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
||..+++++|+++ |+++|. ++. ++++++++.+.+.. ..++|.|.. +++..+|+.||+|
T Consensus 538 A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~-------~~V~flG~~--~dv~~ll~aaDv~ 595 (694)
T PRK15179 538 AAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG-------ERILFTGLS--RRVGYWLTQFNAF 595 (694)
T ss_pred HHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC-------CcEEEcCCc--chHHHHHHhcCEE
Confidence 9999999998754 888874 232 23455555554321 233457875 4799999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~--~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
|+||.+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|+ ++++++|.+++.... ....+.+++
T Consensus 596 VlpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~a 670 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKA 670 (694)
T ss_pred EeccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHH
Confidence 99999999999999999994 899999999999888 567999998874 689999998887543 233445667
Q ss_pred HHHH-HhcCHHHHHHHHHHHH
Q 003029 540 FTHV-TTHTAQEWAETFVSEL 559 (856)
Q Consensus 540 ~~~v-~~~~~~~W~~~fl~~l 559 (856)
++++ +.|++..-++.+++-+
T Consensus 671 r~~a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 7776 5788888777776644
No 51
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.88 E-value=1.6e-20 Score=218.89 Aligned_cols=274 Identities=16% Similarity=0.092 Sum_probs=188.9
Q ss_pred cCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCc-hhhhhcCc-c---cHHHHHHhhcCCEEEEeCHHHHHHHH
Q 003029 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS-SEIHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 229 ~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~-~e~fr~lp-~---~~~il~~ll~aDlIgf~t~~~~~~Fl 303 (856)
..++|+++++-.+.... . +.+..+.+++..++|.-.-. ...-...+ + -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~~-~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQ-A-VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccch-H-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 45679998876554433 3 33556789999999964211 00000000 1 12223445567888877765444433
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 12234578899999876543311 0123468999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+.++.++.|++ .|+++|. +++. +++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999999875 4777763 3433 3455555543321 1 255 47764 578899999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCC-Cchhhc--cCCeEEECC----CC----HHHHHHHHHHHHcCCHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a-G~~~~l--g~~g~lVnP----~d----~~~lA~ai~~aL~~~~~er 532 (856)
|+||.+||||++++|||||| .|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 899999986 777777 778999984 33 8999999999994 3467
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 533 EKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
.++.+++++.++.+++..-++.+.+-++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7888888999999998888877776554
No 52
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.88 E-value=1.3e-20 Score=215.27 Aligned_cols=285 Identities=15% Similarity=0.126 Sum_probs=199.0
Q ss_pred CCCCEEEEeCccchhHH--HHHHhcCCCCeEEEEEecCCCchhhhhc-Cc--ccH----HHHHH-hhcCCEEEEeCHHHH
Q 003029 230 KDGDVVWCHDYHLMFLP--KCLKEYNSDMKVGWFLHTPFPSSEIHRT-LP--SRS----DLLRA-VLAADLVGFHTYDYA 299 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp--~~lr~~~~~~~i~~flH~PfP~~e~fr~-lp--~~~----~il~~-ll~aDlIgf~t~~~~ 299 (856)
...|+||+|.......+ ..+++ ..+.++.+.+|--||..-+-.. .+ ... .+.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 35699999986654322 23333 3456777777765543211111 10 001 11111 336899988888766
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccC
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~K 376 (856)
+.+.. .+ ....++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65432 12 12457889999999998865321 1 122345555 3568999999999999
Q ss_pred ChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003029 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (856)
Q Consensus 377 Gi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 456 (856)
|+..+++|++.+ +++|+ +.|+++|. ++.. +++++++.+.+. ..|+| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999876 44555 55887763 3433 334444443322 23664 789999999999
Q ss_pred HHHccEEEECCCCcCCC----hhHHHHHhhcCCCCceEEEeCCCCc--hhhccCCeEEECCCCHHHHHHHHHHHHcCCHH
Q 003029 457 YAVTDVALVTSLRDGMN----LVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (856)
Q Consensus 457 y~~ADv~v~~S~~EG~~----Lv~lEama~~~~~~g~lVlSe~aG~--~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~ 530 (856)
|+.||++++||..|+++ ...+|||||+ .|+|+|..+|. .+.+..+|++++|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 99999999999999954 4579999994 89999988774 355556899999999999999999999865 5
Q ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhH
Q 003029 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (856)
Q Consensus 531 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 563 (856)
++..+.+++++++. .+|+...++.|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77888888898885 6899999999999888654
No 53
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.88 E-value=1.7e-20 Score=208.14 Aligned_cols=266 Identities=20% Similarity=0.218 Sum_probs=191.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|..+...+..++.+ ..+.++.+.+|-.++.... .. ..+..+|.+.+.+....+.+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~---~~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YN---AIMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HH---HHHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 459999998776555554443 3378999999987653321 11 224468988887765544432 222
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~~ 387 (856)
+. ...++.++|+|||...|.+....+ .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 22 235788999999998886532211 1222245544 367789999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 003029 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (856)
Q Consensus 388 ~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S 467 (856)
+.+.+|+ +.|+++|... ....+.+.+.+.+.+.+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 9887665 4588787532 1123344444444443221 12554 666 678999999999999999
Q ss_pred -CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 468 -~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|..++..+++++.++.++++++++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999994 899999999988887 347999999999999999998888888899999999988886
Q ss_pred hc
Q 003029 545 TH 546 (856)
Q Consensus 545 ~~ 546 (856)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 54
No 54
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.87 E-value=2.5e-21 Score=209.20 Aligned_cols=217 Identities=15% Similarity=0.197 Sum_probs=142.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|||++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+.+..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 589999999999986 45699999999999986 799999999999999999998885 4689999
Q ss_pred ceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC--------CCcEEeeecce-------EEEEeecCCh----
Q 003029 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-------LVWNYKYADV---- 727 (856)
Q Consensus 669 G~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~ie~k~~s-------i~~~y~~~d~---- 727 (856)
|+.|.. .++. +... ++ .+.+.++++...... .+.+....... ..+.+...+.
T Consensus 67 Ga~I~~~~~~~l~~~~----i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQD----LP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEeec----CC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999984 3332 3222 33 234444444322110 01111000000 0000000000
Q ss_pred --hh-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 728 --EF-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 728 --e~-------~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
.+ ......++.+.+ ...+. ..+.+. ++..++||.|+++|||+|+++|++++| ++.++++|||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 00 001112333333 22221 235554 356799999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC------c-c--ccC--CHHHHHHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF------L-H--YLR--MKMCMRFLSQNYL 842 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~--~l~--~~~~~~~~l~~~~ 842 (856)
| +.||++| |+.+ +.+|.++|.. + | -.. +-.-|.++|++++
T Consensus 212 D-~~NDi~M-l~~a---g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 212 D-AMNDREM-LGSV---GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred C-CHHHHHH-HHHc---CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 9 9999999 8877 6799998852 2 3 233 3345899999887
No 55
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.87 E-value=2e-20 Score=207.82 Aligned_cols=251 Identities=18% Similarity=0.061 Sum_probs=172.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHH-HHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il-~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
+.|+|++|..+...++.++........+.+..|..+...+.+........+. ..+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 5699999998877777766665555556677787654433222111100111 12334677766665444433210
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~ 386 (856)
....++.++|+|||.+.|..... ..+. ++.+ .++++|+++||+.+.||++.+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 12357889999999988764321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~ 466 (856)
.+.+++|++ .|+++|. ++....+++ .+.+.+. . ..|.+ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~~----~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIKK----KVKELGL----E--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHHH----HHHhcCC----C--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 999988875 4887863 333333333 3333221 1 13554 665 67899999999999999
Q ss_pred CCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 467 S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~-~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
|..||||++++||||| |.|+|+|+.+|..+.+++ ++++..+.+++++|++|.++++++...
T Consensus 274 s~~E~~~~~~lEAma~----G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~ 335 (358)
T cd03812 274 SLYEGLPLVLIEAQAS----GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRE 335 (358)
T ss_pred ccccCCCHHHHHHHHh----CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchh
Confidence 9999999999999999 499999999999988844 455666667899999999999988633
No 56
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.87 E-value=1.2e-20 Score=208.80 Aligned_cols=276 Identities=20% Similarity=0.202 Sum_probs=200.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch--hhhhc---CcccHHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~fr~---lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
...|+||+|.+..... +....++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+....+.+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4569999998777665 456788999999755422 11110 111223344566889999888766655543
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~A 384 (856)
. .+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~~-----------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LGV-----------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hCc-----------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 111 2346889999999887754211 11 1111223578899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
+..+.+.+|+ +.|+++|.... .+......++ +. + ..+.+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~~----~~----~---~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGW----LNEELLARLR----EL----G---LGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCcc----ccHHHHHHHH----Hc----C---CCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999988775 44777764321 1111222221 11 1 112344689999999999999999999
Q ss_pred ECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 465 ~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
+||..||+|++++|||+|+ .|+|+|+.+|..+.++.+|++++|.|+++++++|.+++++ ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999994 8999999988888777889999999999999999999875 4577788888888899
Q ss_pred hcCHHHHHHHHH
Q 003029 545 THTAQEWAETFV 556 (856)
Q Consensus 545 ~~~~~~W~~~fl 556 (856)
.++|+.+++.++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
No 57
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.87 E-value=8.2e-20 Score=208.75 Aligned_cols=272 Identities=13% Similarity=0.090 Sum_probs=192.2
Q ss_pred CCCEEEEeCccchh-HHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
+.|+++.|-++... ...+++++....++....|......+.+ .+....+.+. +..+|.|.+.+....+.+..
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 45677766554433 3344566655556888888532111111 0111112222 45789999888766554432
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
.++ ....++.++|+|+|...+.+.. ...+...|+++||+.+.||++.+++|+..+
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 222 1245778999999987664320 013567899999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH--ccEEEEC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 466 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~--ADv~v~~ 466 (856)
.+.+|+.. +.++.+|. ++.... +++++.+.+. ...|. +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~iiG~-----g~~~~~----l~~~~~~~~~------~~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHIGG-----GPLEDT----LKELAESKPE------NISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEEeC-----chHHHH----HHHHHHhcCC------CceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99888753 66776763 333333 3344332111 01255 5899999999999986 7899999
Q ss_pred CCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC-CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 467 S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP-~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
|..||||++++|||||+ .|+|+|..+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++++++++++
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999994 899999999999988 446899987 4899999999999985 558888888888887
Q ss_pred -HhcCHHHHHHHHH
Q 003029 544 -TTHTAQEWAETFV 556 (856)
Q Consensus 544 -~~~~~~~W~~~fl 556 (856)
+.+++..+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6789888888775
No 58
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.87 E-value=6.2e-20 Score=210.46 Aligned_cols=307 Identities=14% Similarity=0.126 Sum_probs=192.0
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-HHH-----------------------HH--
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDL-----------------------LR-- 283 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-~~i-----------------------l~-- 283 (856)
.+.|++|.|||+.......+|+..++++.+|+.|- +++-|.|... ..+ ++
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHA----T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHA----TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecc----cccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 46799999999999999999988899999999994 3444432110 000 11
Q ss_pred HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCC----chHHHHHH----
Q 003029 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 355 (856)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~---- 355 (856)
....||.+...+....+ .|..+ .++...+ |+|||||++.|.+..+.. ..++++..
T Consensus 223 aa~~Ad~fttVS~it~~----E~~~L------------l~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITAY----EAEHL------------LKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHHH----HHHHH------------hCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 12233333332221111 12222 2333223 999999999987542110 01122222
Q ss_pred -HHHHh---cCCceEEE-eecccc-cCChHHHHHHHHHHHHhCcC--ccCceEEEEEEcCCCCCh---------HHHHHH
Q 003029 356 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDV---------PEYQRL 418 (856)
Q Consensus 356 -lr~~~---~~~~iIl~-V~Rld~-~KGi~~~L~Af~~~l~~~P~--~~~~v~Lv~v~~p~r~~~---------~~~~~l 418 (856)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..--. -...|+-+ +..|+.... .-.++|
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvaf-ii~p~~~~~~~~~~l~g~~~~~~l 364 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAF-FIMPAKTNNFNVESLKGQAVRKQL 364 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEE-EEecCccCCcCHHhhcchHHHHHH
Confidence 34444 26788888 899999 99999999999988542111 11123333 334554331 223455
Q ss_pred HHHHHHHHHHhhcc--------------------------------------------------------------cC-C
Q 003029 419 TSQVHEIVGRINGR--------------------------------------------------------------FG-T 435 (856)
Q Consensus 419 ~~~l~~lv~~IN~~--------------------------------------------------------------~g-~ 435 (856)
++.++++..+|+.+ |. .
T Consensus 365 ~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~ 444 (590)
T cd03793 365 RDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSP 444 (590)
T ss_pred HHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCC
Confidence 66666655555444 00 0
Q ss_pred CCcccEEEeCCCCCH------HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCch----hhcc--
Q 003029 436 LTAVPIHHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG-- 503 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~----~~lg-- 503 (856)
.+...|+|...+++. .+...+|+.||+||+||++||||++++||||| |.|+|+|..+|.. +.++
T Consensus 445 ~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~----G~PvI~t~~~gf~~~v~E~v~~~ 520 (590)
T cd03793 445 EDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSITTNLSGFGCFMEEHIEDP 520 (590)
T ss_pred CCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc----CCCEEEccCcchhhhhHHHhccC
Confidence 122345554444332 45788999999999999999999999999999 4999999999984 4443
Q ss_pred -CCeEEEC-------CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 504 -AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 -~~g~lVn-------P~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
..|+.|. +.+++++|++|.+.++++..++........+....++|.+-+..+++....+
T Consensus 521 ~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~A 587 (590)
T cd03793 521 ESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLA 587 (590)
T ss_pred CCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3578887 5678899999999997754333333333336667788888887777665443
No 59
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.87 E-value=7.7e-21 Score=205.00 Aligned_cols=218 Identities=15% Similarity=0.251 Sum_probs=141.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----gl 664 (856)
++|||++|+||||++. ...++++++++|++|.+ +|+.|+|+|||++..+.+.+..+++ ++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 66 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYC 66 (270)
T ss_pred ceEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeE
Confidence 4799999999999986 45699999999999986 7999999999999999999988753 58
Q ss_pred EeeCceEEEe--cCCe-eeecccccCChHHHHHHHHHHHHHHhc--------CCCcEEeeecce-----------EEEEe
Q 003029 665 AAENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-----------LVWNY 722 (856)
Q Consensus 665 iaenG~~i~~--~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~ie~k~~s-----------i~~~y 722 (856)
|+.||++|.. +++. +... ++. +.+..+++...+. ..+.+...+... +...+
T Consensus 67 I~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (270)
T PRK10513 67 ITNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVF 139 (270)
T ss_pred EEcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccc
Confidence 9999999984 2332 3322 332 2333333332211 011111111000 00000
Q ss_pred ecC---Ch--hh------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC
Q 003029 723 KYA---DV--EF------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (856)
Q Consensus 723 ~~~---d~--e~------~-~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~ 789 (856)
... ++ .+ . .....++.+.+ ...+. ..+.++ ++..++||.|+|+|||.|+++|++++| ++
T Consensus 140 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~ 211 (270)
T PRK10513 140 REVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IK 211 (270)
T ss_pred cchhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CC
Confidence 000 00 00 0 01112222333 21111 235544 456799999999999999999999999 67
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccC--CHHHHHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLR--MKMCMRFLSQNYL 842 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~--~~~~~~~~l~~~~ 842 (856)
.++++|||| +.||++| |+.+ +.+|.++|.. | |-.. +-.-|.++|++++
T Consensus 212 ~~~v~afGD-~~NDi~M-l~~a---g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 212 PEEVMAIGD-QENDIAM-IEYA---GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHEEEECC-chhhHHH-HHhC---CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 899999999 9999999 8866 6799998852 2 3332 2345888887765
No 60
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.87 E-value=5.5e-20 Score=202.67 Aligned_cols=278 Identities=17% Similarity=0.187 Sum_probs=187.5
Q ss_pred cCCCCEEEEeCccc-hhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH------HHHhhcCCEEEEeCHHHHHH
Q 003029 229 YKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 301 (856)
Q Consensus 229 ~~~~DvIwvHDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i------l~~ll~aDlIgf~t~~~~~~ 301 (856)
....|+|++|+... ...+.....+..+.++.+..|..++...... -+....+ ...+..+|.|.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 34679999998432 2222222222346788888887655432100 0011100 11233567777666433322
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCCh
Q 003029 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (856)
Q Consensus 302 Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi 378 (856)
... .+...++.++|+|+|.+.|.+... .. . ++.+ .++++|+++||+.+.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~---~~----~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPS---RG----R-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchh---hh----h-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 211 122457889999999988764321 00 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
..+++|+..+.+++|++ .|+++|... +.+. ..++.++.+.+. . ..|. +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALGL----E--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHHh
Confidence 99999999999887765 477776422 1121 222222222221 1 1254 589999999999999
Q ss_pred HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhcc-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg-~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
.||++++||..||||++++|||+|| .|+|+|+.+|..+.+. ..|+++ |.+.++++++|.++++++ +++..+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999994 8999999999988883 345555 456699999999999987 57788888
Q ss_pred HHHHH-HHhcCHHHHHHHHH
Q 003029 538 HNFTH-VTTHTAQEWAETFV 556 (856)
Q Consensus 538 ~~~~~-v~~~~~~~W~~~fl 556 (856)
++++. .+.+++..-++.++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 58888887777664
No 61
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.86 E-value=5.2e-20 Score=203.64 Aligned_cols=280 Identities=20% Similarity=0.162 Sum_probs=193.1
Q ss_pred CCCEEEEeCccch----hHHHHHH-hcCCCCeEEEEEecCCCchhhhhcCcccHHHH-HHhhcCCEEEEeCHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLM----FLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~----llp~~lr-~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il-~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
..|+|++|+++-. ......+ ....+.++.+.+|...+.... .....+. ..+..+|.|.+.+.+..+.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 4589999873321 1111111 123678999999986222111 1112222 2345789999887444444432
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~A 384 (856)
. ....++.++|+|+|...+..... .+. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~-------~~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES-------LKA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh-------hHh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 1 01357889999999876653210 111 1112467899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
++.+.+++|++ .|+++|.... ..........+++.+.+.. ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~~----~l~i~G~~~~----~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPDV----RLLVAGETHP----DLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCCe----EEEEeccCcc----chhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 99998887764 4777764321 1111111100223332211 13666555599999999999999999
Q ss_pred ECCCCc--CCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 465 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 465 ~~S~~E--G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
+||..| |++++++|||||| .|+|+|+.+| .+.+ +.+|+++++.|++++|++|.++++++ +.+.++.++.+
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999995 8999999988 6666 56799999999999999999999865 46777888889
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (856)
++++++++..+++.+++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999999887654
No 62
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.86 E-value=3.2e-20 Score=208.58 Aligned_cols=275 Identities=20% Similarity=0.162 Sum_probs=190.4
Q ss_pred HHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCC-CchhhhhcCcc---cHHHHHHhhcCCEEEEeCH
Q 003029 221 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTY 296 (856)
Q Consensus 221 fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~Pf-P~~e~fr~lp~---~~~il~~ll~aDlIgf~t~ 296 (856)
|.+++.. ..+.|+|++|..+.... .+.......++..++|... .....-...++ .+.++..+..+|.|.+.+.
T Consensus 90 ~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 166 (372)
T cd04949 90 FLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATE 166 (372)
T ss_pred HHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccH
Confidence 3343433 46779999988776655 2223334556667777532 11100001111 2344555667899998887
Q ss_pred HHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccC
Q 003029 297 DYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376 (856)
Q Consensus 297 ~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~K 376 (856)
...+.+.. .++ ...++.++|+|++...+.+.. .....+..|+++||+.+.|
T Consensus 167 ~~~~~l~~----~~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K 217 (372)
T cd04949 167 QQKQDLQK----QFG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEK 217 (372)
T ss_pred HHHHHHHH----HhC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCccc
Confidence 66555543 111 112378999999988765321 0123567899999999999
Q ss_pred ChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003029 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (856)
Q Consensus 377 Gi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 456 (856)
|+..+|+|+.++.+++|+++ |+++|.+ +....++ .++.+.+.. + .|. +.|. .+++..+
T Consensus 218 ~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~----~~~~~~~~~----~--~v~-~~g~--~~~~~~~ 275 (372)
T cd04949 218 QLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLK----ELIEELGLE----D--YVF-LKGY--TRDLDEV 275 (372)
T ss_pred CHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHH----HHHHHcCCc----c--eEE-EcCC--CCCHHHH
Confidence 99999999999999999854 7777643 2222232 333232221 1 244 4663 4679999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCC-Cchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a-G~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
|+.||++|+||..||||++++|||+|+ .|+|+|+.+ |..+.+ |.+|++++|.|++++|++|..+++++ +.+.
T Consensus 276 ~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~ 350 (372)
T cd04949 276 YQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQ 350 (372)
T ss_pred HhhhhEEEecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999999999999999994 899999987 777777 67899999999999999999999976 4777
Q ss_pred HHHHHHHHHHHhcCHHHHHHH
Q 003029 534 KRHWHNFTHVTTHTAQEWAET 554 (856)
Q Consensus 534 ~r~~~~~~~v~~~~~~~W~~~ 554 (856)
++.+++++...++++..+++.
T Consensus 351 ~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 351 KFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHHHHHHHHhhHHHHHhc
Confidence 788888888888887776653
No 63
>PRK10976 putative hydrolase; Provisional
Probab=99.86 E-value=8.5e-21 Score=204.29 Aligned_cols=219 Identities=14% Similarity=0.210 Sum_probs=141.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|||++|+||||+++ +..++++++++|++|.+ +|+.|+|+|||+...+.+.+..++ .++||.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 589999999999987 35699999999999986 899999999999999999988885 4689999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CC-CcEEeeecc------e---EEEEee---cCCh
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TP-RSHFEQRET------S---LVWNYK---YADV 727 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~-gs~ie~k~~------s---i~~~y~---~~d~ 727 (856)
|+.|...++.. +....++ .+.+.++++...+. .. +.++..... . ..+... ....
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEP 141 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhccc
Confidence 99998522221 1112233 34445555433211 01 111110000 0 000000 0000
Q ss_pred -hh--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 728 -EF--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 728 -e~--------~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
.+ ......++.+.+ .+.+. ..+.++ .+..++||.|+++|||.|+++|++++| +++++|+|||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viafG 213 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAFG 213 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEEc
Confidence 00 001112222333 21111 235544 456799999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC------c-c-c-cC--CHHHHHHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF------L-H-Y-LR--MKMCMRFLSQNYL 842 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~-~-l~--~~~~~~~~l~~~~ 842 (856)
| +.||++| |+++ +.+|.++|.. + + + .+ +-.-|.+.|++++
T Consensus 214 D-~~NDi~M-l~~a---g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 214 D-GMNDAEM-LSMA---GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred C-CcccHHH-HHHc---CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 9 9999999 8876 6789998862 1 1 2 22 2345888888876
No 64
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.86 E-value=5.3e-20 Score=209.88 Aligned_cols=187 Identities=15% Similarity=0.057 Sum_probs=131.1
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecc--cccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL--DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rl--d~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
.++.++|||||++.+....... ..+ ...++++|++|+|. ++.||+..+|+|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4788999999975432211100 001 12467899999994 4789999999999875 23 356887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
+|.+. +.. . ..|.+ .|. .+.+++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~----~~~-------~---------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS----PFT-------A---------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC----ccc-------c---------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 87421 100 0 02444 343 36789999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003029 483 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (856)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (856)
+ .|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... ........+++.+ ..+++..-++++++-++
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4 999999999998888 44799999999999998653322110 0001123355554 56898888888877654
No 65
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.86 E-value=1.3e-20 Score=203.74 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=141.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc---eEEe
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---glia 666 (856)
.+++|++|+||||+++ ...++++++++|++|.+ +|+.|+|+|||+...+.+.+..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 5799999999999986 34578999999999986 7999999999999999999998854 5999
Q ss_pred eCceEEEecCC-e----eeecccccCChHHHHHHHHHHHHHHhcCCCcEE--eee-----------------------cc
Q 003029 667 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQR-----------------------ET 716 (856)
Q Consensus 667 enG~~i~~~~~-~----w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i--e~k-----------------------~~ 716 (856)
+||+.|..... . + ......++ .+.+.++++..... .+..+ ... ..
T Consensus 71 ~NGa~I~~~~~~~~~~~~-~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDF-PRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCc-eEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 1 01111233 34455555443221 01000 000 00
Q ss_pred eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCC---CcceE
Q 003029 717 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 793 (856)
Q Consensus 717 si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~---~~d~v 793 (856)
...+.+.. ++ .+..++.+.+ .. ..+.++.+..++||+|+++|||+|+++|++++| + +.++|
T Consensus 146 ~~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 00001100 11 1223344444 22 145666666799999999999999999999999 6 68999
Q ss_pred EEEecCCcccccccccccccCcceEEeCCCC------------c-cc--cCCHHHHHHHHHHHHH
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------------L-HY--LRMKMCMRFLSQNYLM 843 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------------~-~~--l~~~~~~~~~l~~~~~ 843 (856)
+|||| +.||++| |+++ +.+|.+++.. + |. -...+-+.+-|+.++.
T Consensus 210 iafGD-s~NDi~M-l~~a---g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 269 (271)
T PRK03669 210 LGLGD-GPNDAPL-LDVM---DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFS 269 (271)
T ss_pred EEEcC-CHHHHHH-HHhC---CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHh
Confidence 99999 9999999 8876 5677776311 1 32 2344467777777664
No 66
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.86 E-value=1.9e-20 Score=196.99 Aligned_cols=208 Identities=11% Similarity=0.155 Sum_probs=136.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
.+|+|++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~ 66 (230)
T PRK01158 2 KIKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAE 66 (230)
T ss_pred ceeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEe
Confidence 3689999999999986 34689999999999985 799999999999999998888874 479999
Q ss_pred CceEEEec--CCe-eeecccccCChHHHHHHHHHHHHHHhcCCCc--EEeee--c--ceEEEEeecCChhhhHHHHHHHH
Q 003029 668 NGMFLRCT--TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--E--TSLVWNYKYADVEFGRIQARDML 738 (856)
Q Consensus 668 nG~~i~~~--~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs--~ie~k--~--~si~~~y~~~d~e~~~~qa~el~ 738 (856)
||+++... ++. +... .+ .+..+++......+.. .+... . ......+.... . .++.
T Consensus 67 nGa~i~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~ 130 (230)
T PRK01158 67 NGGVISVGFDGKRIFLGD----IE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----V---EEVR 130 (230)
T ss_pred cCeEEEEcCCCCEEEEcc----hH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----H---HHHH
Confidence 99999853 222 2221 11 1222232222111111 11100 0 00001111111 1 1222
Q ss_pred HHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE
Q 003029 739 QHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV 818 (856)
Q Consensus 739 ~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v 818 (856)
+.+ +.. ...+.++.+..++||.++++|||.|+++++++++ ++++++++||| +.||++| |+.+ +.+|
T Consensus 131 ~~l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m-~~~a---g~~v 196 (230)
T PRK01158 131 ELL-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEM-FEVA---GFGV 196 (230)
T ss_pred HHH-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHH-HHhc---CceE
Confidence 222 221 1245556666789999999999999999999999 67899999999 9999999 8866 7788
Q ss_pred EeCCCC------c-cccCC--HHHHHHHHHHHH
Q 003029 819 RLDSSF------L-HYLRM--KMCMRFLSQNYL 842 (856)
Q Consensus 819 ~V~~~~------~-~~l~~--~~~~~~~l~~~~ 842 (856)
.++|.. + |-..+ ..-|.+.|++++
T Consensus 197 am~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 197 AVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred EecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 898752 2 43332 233667776654
No 67
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.86 E-value=2.9e-19 Score=197.88 Aligned_cols=266 Identities=19% Similarity=0.164 Sum_probs=192.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|..+...+..++..+....++.+.+|.+..... +....+...+..+|.+...+....+.+.+ ..
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIR----LL 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4699999987665555555555557888888886422111 11122334455799999988876665543 11
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 1345789999999998875431 0112456789999999999999999999999887
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~- 469 (856)
..|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 7665 457777642 222 233334433321 1233458999999999999999999999999
Q ss_pred -----cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 470 -----EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++. ++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPE-LRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Confidence 99999999999994 899999998888777 347999999999999999999998764 577777788877
Q ss_pred H-HhcCHHHHHH
Q 003029 543 V-TTHTAQEWAE 553 (856)
Q Consensus 543 v-~~~~~~~W~~ 553 (856)
+ ..|++...++
T Consensus 342 ~~~~~s~~~~~~ 353 (355)
T cd03799 342 VEEEFDIRKQAA 353 (355)
T ss_pred HHHhcCHHHHhh
Confidence 7 4577666554
No 68
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.86 E-value=2.9e-19 Score=195.22 Aligned_cols=279 Identities=22% Similarity=0.188 Sum_probs=201.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhh----cCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr----~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (856)
..|+|++|+++...+.. +.....+.++.+.+|.+++...... ...........+..+|.+.+.+....+.+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 46999999999887765 3444568899999999876432110 00111122233556788888887666555431
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH---hcCCceEEEeecccccCChHHHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
+.....++.++|+|+|...+.+.. ...+.. ..+++.|+++||+.+.||+..+++
T Consensus 163 --------------~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~ 219 (374)
T cd03801 163 --------------GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLE 219 (374)
T ss_pred --------------CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHH
Confidence 001125789999999988775321 111111 235688999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+..+.+++|+ +.|+++|. ++....+++ ++.+.+.. ..|. +.|.++.+++..+|+.||++
T Consensus 220 ~~~~~~~~~~~----~~l~i~G~-----~~~~~~~~~----~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 220 ALAKLRKEYPD----VRLVIVGD-----GPLREELEA----LAAELGLG------DRVT-FLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred HHHHHhhhcCC----eEEEEEeC-----cHHHHHHHH----HHHHhCCC------cceE-EEeccChhhHHHHHHhcCEE
Confidence 99999887765 45777762 233333333 33222211 1355 58999999999999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH-
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF- 540 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~- 540 (856)
++||..||+|++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|+++++++|.++++++. .+.++.++++
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~ 354 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPE-LRRRLGEAARE 354 (374)
T ss_pred EecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChH-HHHHHHHHHHH
Confidence 99999999999999999994 899999999998888 467999999999999999999998764 6666677766
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (856)
...+.+++..+++.+++.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 355 RVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHhcCHHHHHHHHHHhh
Confidence 4568899999999887654
No 69
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.85 E-value=2.2e-19 Score=197.05 Aligned_cols=279 Identities=20% Similarity=0.178 Sum_probs=193.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCc-ccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp-~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+|++|+++...............++.+..|..++... ...+ ....+..- ...+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 4699999999987777776665467889999988654421 0001 11111111 12456665555443333321
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af 385 (856)
. +. ...++.++|+|+|...|.+... ....+++++ .++++|+++||+.+.||++.+++|+
T Consensus 154 ~-~~-----------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 I-GY-----------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred c-CC-----------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 0 11 2346788999999987764321 112233344 3567899999999999999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 003029 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (856)
Q Consensus 386 ~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~ 465 (856)
..+.+++|++ .|+++|.+. ....++.... ... +.. ..|.+ .+. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~~----~l~i~G~~~-----~~~~~~~~~~---~~~----~~~--~~v~~-~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPNA----RLLLVGDGP-----DRANLELLAL---KEL----GLE--DKVIL-LGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCCe----EEEEecCCc-----chhHHHHHHH---Hhc----CCC--ceEEE-ccc--cccHHHHHHhCCEEEe
Confidence 9998887764 477776432 1111221111 121 111 12444 554 4689999999999999
Q ss_pred CCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-
Q 003029 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT- 544 (856)
Q Consensus 466 ~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~- 544 (856)
||..||+|++++|||+|+ .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++.
T Consensus 275 ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 999999999999999994 89999999999888855899999999999999999999976 477777788888874
Q ss_pred hcCHHHHHHHHHHHH
Q 003029 545 THTAQEWAETFVSEL 559 (856)
Q Consensus 545 ~~~~~~W~~~fl~~l 559 (856)
.+++..-++.+++.+
T Consensus 350 ~~s~~~~~~~~~~~y 364 (365)
T cd03807 350 NFSIEAMVEAYEELY 364 (365)
T ss_pred hCCHHHHHHHHHHHh
Confidence 588888888877643
No 70
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.85 E-value=2.8e-19 Score=197.27 Aligned_cols=272 Identities=20% Similarity=0.195 Sum_probs=189.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccH---------HHH-HHhhcCCEEEEeCHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLL-RAVLAADLVGFHTYDYAR 300 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~---------~il-~~ll~aDlIgf~t~~~~~ 300 (856)
..|+|++|+............+..+.++.+.+|.+++.. ....+... .+. ..+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 458999998754433333333345788999999887532 21111110 111 224468888887775444
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCC
Q 003029 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 301 ~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KG 377 (856)
.+.. . +...++.++|+|+|...|.+... .. .++.+ .+++.|+++||+.+.||
T Consensus 162 ~~~~-----~------------~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----Y------------GVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----c------------CCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1 12235889999999987764321 11 12222 35678999999999999
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
++.+++|+..+.++.|+ +.|+++|. ++.. ..+++++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGD-----GPER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999999887665 45777763 2222 2334444333221 1244 58999999999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
+.||++++||..||+|++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|. +++++|.++++++. .+.++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 899999999988887 468999999888 99999999999765 55677
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Q 003029 536 HWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
.++.++.+.+++ |++.+.+-
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~~ 370 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEKL 370 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHH
Confidence 788888887765 44444433
No 71
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.85 E-value=4.1e-19 Score=196.48 Aligned_cols=280 Identities=18% Similarity=0.161 Sum_probs=198.1
Q ss_pred cCCCCEEEEeC-ccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcC-cc-------cHHHH-HHhhcCCEEEEeCHHH
Q 003029 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-PS-------RSDLL-RAVLAADLVGFHTYDY 298 (856)
Q Consensus 229 ~~~~DvIwvHD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~l-p~-------~~~il-~~ll~aDlIgf~t~~~ 298 (856)
....|+|++|. ..+..++........+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34579999998 344444444444455789999999887754321111 11 11111 2345789999999877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCCh
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi 378 (856)
.+.+.. .+ ....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----RG-----------VPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----cC-----------CCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 766541 11 1245788999999998776432110 01110 112467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
..+++|+..+.+. |+ +.|+++|. ++....+++. +... ....|.+ .|.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~~~----~~~~-------~~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELKEL----AKAL-------GLDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHHHH----HHHc-------CCCcEEE-eCCCChHHHHHHHH
Confidence 9999999998766 55 45777753 2333233322 2111 1224665 67999999999999
Q ss_pred HccEEEECCCCcCC-----ChhHHHHHhhcCCCCceEEEeCCCCchhhcc--CCeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSLG--AGAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 459 ~ADv~v~~S~~EG~-----~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg--~~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
.||++++||..|++ +++++|||+| |.|+|+|+.+|..+.+. .+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~----G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAA----GKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHC----CCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 6678999999 48999999999998883 4799999999999999999999654 57
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHH
Q 003029 532 REKRHWHNFTHVT-THTAQEWAETFV 556 (856)
Q Consensus 532 r~~r~~~~~~~v~-~~~~~~W~~~fl 556 (856)
+.++.+++++++. .++++.+++.++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7888888888886 899999888763
No 72
>PTZ00174 phosphomannomutase; Provisional
Probab=99.85 E-value=7.7e-20 Score=194.91 Aligned_cols=204 Identities=17% Similarity=0.199 Sum_probs=129.6
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--C--ceE
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N--LWL 664 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~--lgl 664 (856)
++.|||++|+||||+++ +.+++++++++|++|.+ +|++|+|+|||++..+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 56899999999999987 46799999999999986 79999999999999999888743 2 368
Q ss_pred EeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCcEEeeecceEEEEee--cCCh----hhh--
Q 003029 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK--YADV----EFG-- 730 (856)
Q Consensus 665 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~ie~k~~si~~~y~--~~d~----e~~-- 730 (856)
|+.||++|...++. +...++..++.++...+.++++.+. ....+.+++.........+. .... ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 99999999864333 2222211234444455555443321 01122333322111111110 0000 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---Cccc
Q 003029 731 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKN 803 (856)
Q Consensus 731 ---~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~nD 803 (856)
.....++.+.+ ...+....+.... +..++||.|+|+|||.|++.|+++ .++|+||||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 00112344444 3323322333333 347999999999999999999987 3689999993 4799
Q ss_pred ccccccccccCcceEE
Q 003029 804 CNLPLQFLMQTISTVR 819 (856)
Q Consensus 804 e~M~f~~~~~~~~~v~ 819 (856)
++| |++++-.|.+|.
T Consensus 217 ieM-l~~~~~~g~~v~ 231 (247)
T PTZ00174 217 YEI-YNDPRTIGHSVK 231 (247)
T ss_pred Hhh-hhcCCCceEEeC
Confidence 999 998765555554
No 73
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.85 E-value=2.6e-19 Score=201.06 Aligned_cols=268 Identities=14% Similarity=0.115 Sum_probs=177.3
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl 303 (856)
+++..+ .|+||+|+.....+..++++. ....++..+.|..++....+. ...+..+|.+...+..-.+.+.
T Consensus 79 ~l~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~ 149 (359)
T PRK09922 79 WLKETQ-PDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMM 149 (359)
T ss_pred HHHhcC-CCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHH
Confidence 333344 599999998776666666553 233455666676543321111 1223578888877765544443
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeeccc--ccCChHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQK 381 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld--~~KGi~~~ 381 (856)
. .+. ...++.++|+|||.+.+.... ++ ..++++|+++||+. +.||+..+
T Consensus 150 ~-----~~~-----------~~~ki~vi~N~id~~~~~~~~--~~-----------~~~~~~i~~~Grl~~~~~k~~~~l 200 (359)
T PRK09922 150 A-----RGI-----------SAQRISVIYNPVEIKTIIIPP--PE-----------RDKPAVFLYVGRLKFEGQKNVKEL 200 (359)
T ss_pred H-----cCC-----------CHHHEEEEcCCCCHHHccCCC--cc-----------cCCCcEEEEEEEEecccCcCHHHH
Confidence 1 121 134688899999976653211 10 13467899999996 45999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC--CHHHHHHHHHH
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAV 459 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v--~~~el~aly~~ 459 (856)
++|+..+. + ++.|+++|. +++.+. +++++.+.|.. ..|+ |.|.+ +.+++..+|+.
T Consensus 201 ~~a~~~~~---~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 201 FDGLSQTT---G----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred HHHHHhhC---C----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhc
Confidence 99998762 2 366888863 333333 44444443321 1255 47766 45899999999
Q ss_pred ccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-CCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 460 ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
||++|+||..||||++++|||||+ .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+. .| ..
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~-~~--~~ 330 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV-KY--QH 330 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc-cC--CH
Confidence 999999999999999999999994 8999999 88888877 568999999999999999999998774 21 11
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 537 WHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
....+.+.++..+.-..++...+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 331 DAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 222333444444444444444443
No 74
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.84 E-value=6.4e-19 Score=193.37 Aligned_cols=282 Identities=23% Similarity=0.216 Sum_probs=196.6
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
...|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+....
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 356999999655444333333334457888889987653221111 1122233345678999998876666654310
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
....++.++|+|+|...+.+... .....+ ....+++.|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 12357889999999988764321 001111 11246788999999999999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~ 469 (856)
+++|+ +.|+++|.+ +....++ +++...+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~~-----~~~~~~~----~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGDG-----PLREALE----ALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcCC-----cchHHHH----HHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 87665 457766532 2222233 33322221 1234458999999999999999999999999
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH-HHHHhc
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~-~~v~~~ 546 (856)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+.+ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999994 899999999988887 4457999999999999999999998753 3444444 445778
Q ss_pred CHHHHHHHHHHHHHH
Q 003029 547 TAQEWAETFVSELND 561 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~ 561 (856)
++..+++.+.+.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 888888888876654
No 75
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=2.9e-19 Score=197.21 Aligned_cols=272 Identities=23% Similarity=0.189 Sum_probs=193.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc----HHHHHH-hhcCCEEEEeCHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 305 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~----~~il~~-ll~aDlIgf~t~~~~~~Fl~~ 305 (856)
..|+|++|.............+..++++.+++|..||........... ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999987544332222323345688888999877632211111111 122222 34678888877765542211
Q ss_pred HHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCceEEEeecccccCChHHHHH
Q 003029 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 306 ~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
....++.++|+|+|.+.|.+..... ..++++ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0123678899999998876532211 112222 35788999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+..+.++ |++ .|+++|. +++...++ .. ...|.+ .|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~--------~~--------~~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGD-----GPARARLE--------AR--------YPNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeC-----CchHHHHh--------cc--------CCcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99998776 654 4777763 22221221 10 113554 7789999999999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
++||..||||++++|||||+ .|+|+|+.+|..+.+ +..|++++|.|.++++++|.++++++ +++.++...+++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999988888 35799999999999999999999865 477788888888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 003029 542 HVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l 559 (856)
.+..+++..+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888999999999887654
No 76
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.84 E-value=5.6e-20 Score=194.13 Aligned_cols=192 Identities=17% Similarity=0.291 Sum_probs=131.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCceE
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~~ 671 (856)
||+|+||||+++ ...++++++++|++|.+ +|+.++|+|||++..+.++++.++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 789999999986 35599999999999997 799999999999999999999885 5999999999
Q ss_pred EEecCCeeeecccccCChHHHHHHHHHHHHHHhcC-------CC-cEEeee-----------c-----------------
Q 003029 672 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT-------PR-SHFEQR-----------E----------------- 715 (856)
Q Consensus 672 i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt-------~g-s~ie~k-----------~----------------- 715 (856)
+....++. +....++ .+.+..+++...+.. +. .++... .
T Consensus 66 i~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKI--LYEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEE--EEEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeeccccc--chhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94333321 1112234 344555555443321 11 111111 0
Q ss_pred -ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEE
Q 003029 716 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (856)
Q Consensus 716 -~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vl 794 (856)
..+.+. .++ .+...+.+.+ ...+......+..+..++||.|+++|||.|+++|++++| ++.++++
T Consensus 141 i~ki~~~---~~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFF---PDP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEE---SCH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeecc---ccc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 000000 011 1223333333 211121112345678999999999999999999999999 6789999
Q ss_pred EEecCCcccccccccccccCcceEEeCCCC
Q 003029 795 CIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 795 a~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
|||| +.||++| |+.+ +.+|.+++..
T Consensus 207 ~~GD-~~ND~~M-l~~~---~~~~am~na~ 231 (254)
T PF08282_consen 207 AFGD-SENDIEM-LELA---GYSVAMGNAT 231 (254)
T ss_dssp EEES-SGGGHHH-HHHS---SEEEEETTS-
T ss_pred Eeec-ccccHhH-Hhhc---CeEEEEcCCC
Confidence 9999 9999999 8877 8899999873
No 77
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.84 E-value=4.6e-19 Score=192.91 Aligned_cols=262 Identities=17% Similarity=0.102 Sum_probs=182.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.+.+.+......+
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------- 150 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------- 150 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh--------
Confidence 5699999998722222222221 1478888887654322110 011112333557888888876544111
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
......++.++|+|+|...+... ...+++.++++||+.+.||++.+++|+..+.+
T Consensus 151 ----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 151 ----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred ----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 01123578899999998765432 12457899999999999999999999999988
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~E 470 (856)
.+|++ .|+++|.+ ++... +.+++.+.+. .+.+.+.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 47777632 22222 3333333332 123334665 689999999999999999999
Q ss_pred CCChhHHHHHhhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC
Q 003029 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (856)
Q Consensus 471 G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 547 (856)
|||++++|||+|+ .|+|+|+..|..+.+ +.+|+++++.|++++|++|.++++++ +.+.++.++++..++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 899999876655444 34899999999999999999999865 466677777788889999
Q ss_pred HHHHHHHHH
Q 003029 548 AQEWAETFV 556 (856)
Q Consensus 548 ~~~W~~~fl 556 (856)
++..++.|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 998888764
No 78
>PHA01633 putative glycosyl transferase group 1
Probab=99.84 E-value=1e-19 Score=200.37 Aligned_cols=195 Identities=18% Similarity=0.181 Sum_probs=145.8
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~ 410 (856)
+|+|||++.|.+... ...+..+.+...+++..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 678999999875321 01112222222234667899999999999999999999999999998766677776641
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCc
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g 488 (856)
. +++++ +..+ .|+|+. |.++.+++.++|+.||+||+||..||||++++|||||+ .
T Consensus 192 --~-------~~~~l--------~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~ 248 (335)
T PHA01633 192 --K-------QFTQL--------EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----T 248 (335)
T ss_pred --H-------HHHHc--------CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----C
Confidence 1 11111 1111 366542 77789999999999999999999999999999999994 8
Q ss_pred eEEEeCCCCchhhcc------------------C--CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCH
Q 003029 489 VLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 489 ~lVlSe~aG~~~~lg------------------~--~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~ 548 (856)
|+|+|..+|..+..| . .|+++++.|++++|++|.+++.++. +..+..++++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcCH
Confidence 999998888777543 1 2557889999999999999988763 33445566788999999
Q ss_pred HHHHHHHH
Q 003029 549 QEWAETFV 556 (856)
Q Consensus 549 ~~W~~~fl 556 (856)
..-.++|+
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 88777765
No 79
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.83 E-value=9e-19 Score=199.37 Aligned_cols=280 Identities=16% Similarity=0.122 Sum_probs=181.2
Q ss_pred HHHHHHHHHhcC--CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhc------CcccH----------H
Q 003029 219 QMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS----------D 280 (856)
Q Consensus 219 ~~fa~~i~~~~~--~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~------lp~~~----------~ 280 (856)
..+...+.+..+ +.|+|++|...+. .++.....+.+..+..|--. ++.+.. .|.+. .
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 334445555543 4699999864332 33332334567777666421 111111 11110 0
Q ss_pred HHH-HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH
Q 003029 281 LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 359 (856)
Q Consensus 281 il~-~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~ 359 (856)
+-+ .+..+|.|.+.+....+.+.+ .. .....++.++|+|||.+.|.+....+ ..+
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~------~~~--- 220 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYP------NPY--- 220 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCcccc------CCC---
Confidence 001 234678888777766555432 11 11234788999999999886532110 000
Q ss_pred hcCCceEEEeecccccCChHHHH----HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003029 360 FAGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (856)
Q Consensus 360 ~~~~~iIl~V~Rld~~KGi~~~L----~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (856)
..++++|+++||+++.||++.++ .++..+.+.+|+++ |+++|.+ ++ .+++++.. .
T Consensus 221 ~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g-----~~-----~~~~~l~~----~--- 279 (397)
T TIGR03087 221 PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK-----PS-----PAVRALAA----L--- 279 (397)
T ss_pred CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC-----Ch-----HHHHHhcc----C---
Confidence 13567999999999999999888 56666777788754 8777632 22 12333311 1
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-cCCeEEECCCC
Q 003029 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWN 513 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d 513 (856)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||+ .|+|+|..++..... +..|+++. .|
T Consensus 280 ---~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~ 348 (397)
T TIGR03087 280 ---PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-AD 348 (397)
T ss_pred ---CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CC
Confidence 1255 478886 68999999999999997 599999999999994 899998864322111 34588886 89
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003029 514 ITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (856)
Q Consensus 514 ~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (856)
++++|++|.++++++ +.+.++.+++++++ +.|+|...++.+.+-+.
T Consensus 349 ~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 349 PADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999999864 47778888889887 57899999888876553
No 80
>PLN02887 hydrolase family protein
Probab=99.83 E-value=1.1e-19 Score=212.63 Aligned_cols=225 Identities=14% Similarity=0.142 Sum_probs=143.2
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
..+-|+. ++|+|++|+||||++. +.+++++++++|++|.+ +|+.|+|+|||++..+.+.+..++
T Consensus 300 ~~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 300 SLRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred chhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhC
Confidence 4445554 6899999999999986 45799999999999996 799999999999999998888764
Q ss_pred c-----------eEEeeCceEEEe-cCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE---------
Q 003029 662 L-----------WLAAENGMFLRC-TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV--------- 719 (856)
Q Consensus 662 l-----------gliaenG~~i~~-~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~--------- 719 (856)
+ ++|+.||+.|.. .++ .+... ++ .+.+.++++...+..-...+...+....
T Consensus 364 l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~ 436 (580)
T PLN02887 364 LAGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDS 436 (580)
T ss_pred cccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHH
Confidence 2 355679999985 222 23333 33 3445555544322111000111100000
Q ss_pred EE--ee--c---C-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHH
Q 003029 720 WN--YK--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDR 775 (856)
Q Consensus 720 ~~--y~--~---~-d~-e~------------~--~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ 775 (856)
++ +. . . +. ++ . ......+.+.+ .+.+. ..+.++ ++..++||.|+|+|||.|++.
T Consensus 437 ~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~ 514 (580)
T PLN02887 437 LHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKM 514 (580)
T ss_pred HHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHH
Confidence 00 00 0 0 00 00 0 00011222222 22121 235544 456799999999999999999
Q ss_pred HHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccC--CHHHHHHHHHHHH
Q 003029 776 ILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLR--MKMCMRFLSQNYL 842 (856)
Q Consensus 776 ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~--~~~~~~~~l~~~~ 842 (856)
|++++| ++.++|+|||| +.||++| |+++ +.+|.++|.. + |=.. +-+-|.+.|++++
T Consensus 515 L~e~lG------I~~eeviAFGD-s~NDIeM-Le~A---G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 515 LLNHLG------VSPDEIMAIGD-GENDIEM-LQLA---SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred HHHHcC------CCHHHEEEEec-chhhHHH-HHHC---CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 999999 67899999999 9999999 8876 6789998862 2 3222 3344777776653
No 81
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.83 E-value=2.7e-18 Score=188.94 Aligned_cols=258 Identities=19% Similarity=0.191 Sum_probs=178.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.+..+..+.+...+...+++.+++|-.++... ....+. ...|.+...+....+.|.. .
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~---~~~d~ii~~s~~~~~~~~~-----~ 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFK---KGGDAVIAPSRFLLDRYVA-----N 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhc---cCCCEEEEeCHHHHHHHHH-----c
Confidence 3599999987555444332223345899999997653211 111111 1128888877655554432 1
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
+ ....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 162 G-----------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred C-----------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1 11357899999999987754211 012466789999999999999999999998866
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-~ 469 (856)
++ +.|+++|... ......... .. ...|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~--------~~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EG--------DPRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cC--------CCeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 44 5587776432 111111111 10 11355 5899999999999999999999998 7
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 547 (856)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++.+ +.+..+.++.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999994 899999999988888 34799999999999999999999854 4666666666666543
Q ss_pred HHHHHHHHHHH
Q 003029 548 AQEWAETFVSE 558 (856)
Q Consensus 548 ~~~W~~~fl~~ 558 (856)
...++.+++.
T Consensus 347 -~~~~~~~~~~ 356 (359)
T cd03823 347 -EDQAEEYLKL 356 (359)
T ss_pred -HHHHHHHHHH
Confidence 5555555443
No 82
>PLN02423 phosphomannomutase
Probab=99.83 E-value=3e-19 Score=189.90 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=134.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc-C---ceEEe
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 666 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~---lglia 666 (856)
++++++|+||||+++ +.+++++++++|++|.+ . +.|+++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999986 45689999999999985 4 999999999999998888874 2 47899
Q ss_pred eCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhc-----CCCcEEeeecceEEEEe--ecCChh----hh----
Q 003029 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG---- 730 (856)
Q Consensus 667 enG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r-----t~gs~ie~k~~si~~~y--~~~d~e----~~---- 730 (856)
+||+++...++. +...++..++.+-...+.+.++.+... ..+.+++..+..+.+.+ .++... +.
T Consensus 71 ~NGa~i~~~g~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 150 (245)
T PLN02423 71 ENGLVAHKDGKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDK 150 (245)
T ss_pred CCceEEEeCCEEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCc
Confidence 999999854322 211121223323333333333332111 12344443322222221 222111 00
Q ss_pred -HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---Cccccc
Q 003029 731 -RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKNCN 805 (856)
Q Consensus 731 -~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~nDe~ 805 (856)
.....++.+.+ ...+.+..+.+. .|..++||+++|+|||.|++.|+ . +++++||||+ +.||.+
T Consensus 151 i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~e 218 (245)
T PLN02423 151 VHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDHE 218 (245)
T ss_pred cchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcHH
Confidence 01112333444 332333344433 34589999999999999999998 2 6899999994 599999
Q ss_pred ccccccccCcceEEeCCCCccccCCHHHHHHHHHHHH
Q 003029 806 LPLQFLMQTISTVRLDSSFLHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 806 M~f~~~~~~~~~v~V~~~~~~~l~~~~~~~~~l~~~~ 842 (856)
| ++.-+-. + +.+.+|.|+..+|++++
T Consensus 219 M-l~~~~~~--~--------~~~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 219 I-FESERTI--G--------HTVTSPDDTREQCTALF 244 (245)
T ss_pred H-HhCCCcc--e--------EEeCCHHHHHHHHHHhc
Confidence 9 7643222 2 34468999999999875
No 83
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.83 E-value=1.2e-18 Score=199.15 Aligned_cols=186 Identities=12% Similarity=0.034 Sum_probs=135.9
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHh-cC---CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+|+||..+.+..|++ .|+++|
T Consensus 201 ~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYG- 266 (462)
T ss_pred cCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEEC-
Confidence 4589999988754211 11122 22 346999999999999999999999998888874 477775
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+||+..+|++.+. +++. .+++|.|..+.+ .+|+.+||||+||.+||||+|++|||||+
T Consensus 267 ----dGp~~~~L~~~a~----~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G--- 324 (462)
T PLN02846 267 ----SGEDSDEVKAAAE----KLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG--- 324 (462)
T ss_pred ----CCccHHHHHHHHH----hcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC---
Confidence 5666555554443 3321 144467765544 68999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 487 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 487 ~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
.|+|+++..| .+.+ +.+|+++ .|.++++++|.++|+.+++++.. + ....++|+.-+++|+..+.-.
T Consensus 325 -~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~---a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 325 -KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---A---QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred -CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---H---HHHhCCHHHHHHHHHHHhccC
Confidence 8999998876 5766 6788887 48999999999999865433211 1 224788888888888766543
No 84
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.83 E-value=1.5e-18 Score=200.86 Aligned_cols=264 Identities=11% Similarity=0.094 Sum_probs=162.8
Q ss_pred CCCEEEEeCcc-chhH--HHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHH--
Q 003029 231 DGDVVWCHDYH-LMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (856)
Q Consensus 231 ~~DvIwvHDyh-l~ll--p~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~-- 305 (856)
+.||||+|..- |-.. +....+++ + +++..+||.|+.+--...+..-+.++. .++++|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 56999999854 3333 22232333 2 688889999985322222221111111 122233332
Q ss_pred HHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc---CCceEEEeecccccCChHHHH
Q 003029 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (856)
Q Consensus 306 ~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~V~Rld~~KGi~~~L 382 (856)
|+.++.++.... .+. ...+. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 444444321000 011 11111 1259999999864221 111 1221 235589999999999999999
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 003029 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (856)
Q Consensus 383 ~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 462 (856)
+|+..+.++.|++ .|+++| +||+..+++ +++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pnv----rLvIVG-----DGP~reeLe----~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGF----NLDVFG-----NGEDAHEVQ----RAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCe----EEEEEc-----CCccHHHHH----HHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 9999988877764 488775 455544444 44433321 2554 55543 34579999999
Q ss_pred EEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 463 ~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
||+||.+||||+|++|||||+ .|||+|+..|.. .+ |.+|++. .|+++++++|.++|.+++ ++..+.
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~e-~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~~---- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSNE-FFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTPE---- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCCc-eEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHHH----
Confidence 999999999999999999994 899999998754 34 4566653 799999999999999775 332221
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (856)
....++|..-++.++..-
T Consensus 690 -a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HHhhCCHHHHHHHHHHhh
Confidence 133677777777776543
No 85
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.83 E-value=1.4e-18 Score=199.16 Aligned_cols=271 Identities=9% Similarity=-0.011 Sum_probs=176.8
Q ss_pred CCCCEEEEeCccch--h-HHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc------HHHHHH-h-hcCCEEEEeCHHH
Q 003029 230 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR------SDLLRA-V-LAADLVGFHTYDY 298 (856)
Q Consensus 230 ~~~DvIwvHDyhl~--l-lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~------~~il~~-l-l~aDlIgf~t~~~ 298 (856)
+..|+|++|..... . ++.++++ ..+.|+.+.+|.-+++..-. ..+.. ...++. + ..||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985432 2 2333333 34688999999754321100 01100 011111 1 3478887777654
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHH---------------H--hc
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 361 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 361 (856)
.+.+.. .+ ....++.++|+| +.+.|.+.... .....+.+ . -+
T Consensus 172 ~~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 443321 11 134678899999 55667654211 11111111 0 12
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCc--cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~--~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
+..+++++||+.+.||+..+|+|+..+.+..++. ..++.|+++|. ++.. +++++++.+.+ ..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~----~~l~~~~~~~~-------l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLK----EKYLERIKELK-------LK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccH----HHHHHHHHHcC-------CC
Confidence 3467889999999999999999999987632110 01356888873 3333 34444444332 22
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 514 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~ 514 (856)
.++++.|.++.+++..+|++||++|+++ ..+||+++++|||||+ .|+|+|+.+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 4777788999999999999999999743 3588999999999994 899999999998888 56899994 99
Q ss_pred HHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHh
Q 003029 515 TEVANAIARALNMS--PEEREKRHWHNFTHVTT 545 (856)
Q Consensus 515 ~~lA~ai~~aL~~~--~~er~~r~~~~~~~v~~ 545 (856)
+++|++|.++++++ ++++.++.+++++..+.
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999983 66777777777777643
No 86
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.83 E-value=3.3e-19 Score=192.26 Aligned_cols=216 Identities=15% Similarity=0.190 Sum_probs=138.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
++|+|++|+||||++. ...++++++++|++|.+ +|+.|+|+|||++..+.+.++.++ .++|+.
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (272)
T PRK10530 2 TYRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICC 66 (272)
T ss_pred CccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEc
Confidence 4699999999999986 35689999999999986 799999999999999999998885 469999
Q ss_pred CceEEEe-cCCe--eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce------------EEE----------Ee
Q 003029 668 NGMFLRC-TTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS------------LVW----------NY 722 (856)
Q Consensus 668 nG~~i~~-~~~~--w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s------------i~~----------~y 722 (856)
||+.+.. .++. +.. .++ .+.+.++++...+..-..++...+.. ..| .+
T Consensus 67 NGa~i~d~~~~~~l~~~----~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK10530 67 NGTYLYDYQAKKVLEAD----PLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTF 139 (272)
T ss_pred CCcEEEecCCCEEEEec----CCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccce
Confidence 9999985 2222 222 233 34455555443322111111100000 000 00
Q ss_pred ecCCh--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCC
Q 003029 723 KYADV--EF----G-----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSK 784 (856)
Q Consensus 723 ~~~d~--e~----~-----------~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~ 784 (856)
...+. +. . .....++.+.+ .....+.+. ++..++||.+++++||.|++++++++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g--- 212 (272)
T PRK10530 140 TQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG--- 212 (272)
T ss_pred EEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC---
Confidence 00000 00 0 00011222222 122234433 345689999999999999999999999
Q ss_pred cCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCC--HHHHHHHHHHHH
Q 003029 785 KMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRM--KMCMRFLSQNYL 842 (856)
Q Consensus 785 ~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~--~~~~~~~l~~~~ 842 (856)
++++++++||| +.||++| |+.++ ++|.+++.. + |-.++ -.-|.+.|++++
T Consensus 213 ---i~~~e~i~~GD-~~NDi~m-~~~ag---~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 213 ---WSMKNVVAFGD-NFNDISM-LEAAG---LGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred ---CCHHHeEEeCC-ChhhHHH-HHhcC---ceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 67899999999 9999999 88774 677787642 2 43333 234777777664
No 87
>PHA01630 putative group 1 glycosyl transferase
Probab=99.82 E-value=1.5e-18 Score=192.51 Aligned_cols=214 Identities=12% Similarity=0.082 Sum_probs=153.8
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceE
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 366 (856)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 488888888765555432 1110 1236889999999988864311 01244566
Q ss_pred EEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003029 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (856)
Q Consensus 367 l~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 446 (856)
++++|+.+.||++.+|+|++.+.+++|++ .|+++|.. +. +. .+. .+ ..+.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~~-----~~--~~--~l~----~~------------~~~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSSN-----ML--DP--RLF----GL------------NGVKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeCc-----cc--ch--hhc----cc------------cceec
Confidence 67778999999999999999998877764 47777621 11 10 110 00 01245
Q ss_pred CCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEEC--------------
Q 003029 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-------------- 510 (856)
Q Consensus 447 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVn-------------- 510 (856)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999994 899999999888877 45666653
Q ss_pred -----CCCHHHHHHHHHHHHcCC-HHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 511 -----PWNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 511 -----P~d~~~lA~ai~~aL~~~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
|.|.+++++++.++|.++ ++++++++ .......+++++...++.+++.+++
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 227888999999999875 23444444 4445667899999999999887753
No 88
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.82 E-value=3e-18 Score=187.33 Aligned_cols=273 Identities=20% Similarity=0.133 Sum_probs=191.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCc--ccHHHH-HHhhcCCEEEEeCHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLL-RAVLAADLVGFHTYDYARHFVSACT 307 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp--~~~~il-~~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (856)
..|+|++|..+..++..+.+......++.+.+|...+... ..... ....+. ..+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4599999988877777777665566777887776432111 00000 001111 12345789988888776665431
Q ss_pred HHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHH
Q 003029 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (856)
Q Consensus 308 ~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~ 387 (856)
+.. ....++.+.|+|+|.+.+...... ...++..|+++||+.+.||+..+++|+..
T Consensus 157 ---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GII---------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cCC---------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 100 013467788999999877543210 12467899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 003029 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (856)
Q Consensus 388 ~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S 467 (856)
+.+++|++ .|+++|..... .+ .... ++...+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~i~G~~~~~---~~--~~~~---~~~~~~~~------~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPNV----RLLLVGDGDEE---NP--AAIL---EIEKLGLE------GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCCe----EEEEEcCCCcc---hh--hHHH---HHHhcCCc------ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 98777764 58777654321 11 1111 12222111 13554 555 678999999999999999
Q ss_pred CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HH
Q 003029 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (856)
Q Consensus 468 ~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~-v~ 544 (856)
..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++.++++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999994 899999999999888 56799999999999999999988765 4666777777777 58
Q ss_pred hcCHHHHHHHHH
Q 003029 545 THTAQEWAETFV 556 (856)
Q Consensus 545 ~~~~~~W~~~fl 556 (856)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 889888888765
No 89
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.82 E-value=3.6e-18 Score=189.25 Aligned_cols=262 Identities=21% Similarity=0.202 Sum_probs=180.0
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH-HHHhhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i-l~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
.+.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.|...+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 45699999986544332222222 46778888886432211110 011112 22456788888887765554321
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
. .....++.++|+|+|...|.+... .. ........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~------------~~~~~~~~~i~~gi~~~~~~~~~~---~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L------------RRFRDKVRVIPLGLDPARYPRPDA---LE---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h------------cCCccceEEecCCCChhhcCCcch---hh---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 111257889999999987764311 00 01111124678999999999999999999999886
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
. ++.|+++|. ++.. ..+.+++.+.+.. ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 366887763 2322 2333443332211 1355 5899999999999999999999996
Q ss_pred --CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 469 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 469 --~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
.||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +++.++.+++++++
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999994 899999999988876 45799999999999999999999865 57778888888887
Q ss_pred Hh
Q 003029 544 TT 545 (856)
Q Consensus 544 ~~ 545 (856)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 54
No 90
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.81 E-value=3.7e-19 Score=186.47 Aligned_cols=188 Identities=17% Similarity=0.216 Sum_probs=125.4
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCceE
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~~ 671 (856)
|++|+||||+++ ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 689999999986 34689999999999986 799999999999999998888774 5799999999
Q ss_pred EEecCC---eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 672 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 672 i~~~~~---~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
|...+. .|...+ +..|................-.+. .+..........+++ ...++.+++ .
T Consensus 66 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~-~----- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAYL----EEEWFLDIVIAKTFPFSRLKVQYP--RRASLVKMRYGIDVD----TVREIIKEL-G----- 129 (225)
T ss_pred EEeCCCCceEEeccc----CHHHHHHHHHhcccchhhhccccc--cccceEEEeecCCHH----HHHHHHHhc-C-----
Confidence 986332 244322 333432221111000000000000 011111111111222 123333333 1
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..+.+..+..++||.|+++|||.|+++++++++ ++.+++++||| +.||++| |+.+ +.+|.++|.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~Na 193 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDL-FEVP---GFGVAVANA 193 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHH-HHhc---CceEEcCCh
Confidence 123333556799999999999999999999999 66899999999 9999999 8865 778999875
No 91
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.81 E-value=2.2e-19 Score=191.66 Aligned_cols=201 Identities=16% Similarity=0.245 Sum_probs=135.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----ceEEe
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 666 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----lglia 666 (856)
+.+|++|+||||++..+ .+.+.+|++.++|+++.+ +|+.++++|||+...+..+...++ ..+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 35899999999998421 134578999999999986 799999999999999998876553 35899
Q ss_pred eCceEEEecCC-----eeeecccccCChHHH-HHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHH
Q 003029 667 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (856)
Q Consensus 667 enG~~i~~~~~-----~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~ 740 (856)
+||+.|..++. .|.... ...|. +.+..+...+...++......+...+.+.+...+ ......++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999986431 122111 22233 3344444444444444434444455555543211 01112233333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEE
Q 003029 741 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVR 819 (856)
Q Consensus 741 L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~ 819 (856)
+ ... ...+.+ ..+..++||+|++++||.|+++++++++ ++.+.+++||| +.||++| |+.+. +.+|.
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~m-l~~~~--~~~va 208 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIEL-FEIGS--VRGVI 208 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHH-HHccC--CcEEE
Confidence 3 221 223443 5577899999999999999999999999 67899999999 9999999 87642 45777
Q ss_pred eCCC
Q 003029 820 LDSS 823 (856)
Q Consensus 820 V~~~ 823 (856)
|+|.
T Consensus 209 ~~na 212 (249)
T TIGR01485 209 VSNA 212 (249)
T ss_pred ECCC
Confidence 7764
No 92
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.81 E-value=5.9e-18 Score=186.21 Aligned_cols=242 Identities=19% Similarity=0.141 Sum_probs=166.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|+....++ . .+..+.++.+++|..++... ..........+.+.+-+......+.
T Consensus 87 ~~Divh~~~~~~~~~--~--~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~------- 147 (335)
T cd03802 87 DFDIVHNHSLHLPLP--F--ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWP------- 147 (335)
T ss_pred CCCEEEecCcccchh--h--hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhcc-------
Confidence 369999999887766 2 23456789999998754221 1123344455555544433222111
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
.. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+.+
T Consensus 148 ------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 148 ------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred ------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 01 468899999999888641 1246789999999999999999999754
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-~ 469 (856)
++ +.|+++|... ..+ .+...+.+... ++ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4577777432 111 22222222210 11 1355 4899999999999999999999998 5
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHhc
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~-v~~~ 546 (856)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++..+.+ +.++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999994 899999999999888 347999987 99999999999765431 12222 3667
Q ss_pred CHHHHHHHHHH
Q 003029 547 TAQEWAETFVS 557 (856)
Q Consensus 547 ~~~~W~~~fl~ 557 (856)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 77766666654
No 93
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.80 E-value=1.1e-18 Score=186.87 Aligned_cols=197 Identities=16% Similarity=0.249 Sum_probs=128.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCce
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~ 670 (856)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.+.+..++ .++|+.||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 35689999999999986 699999999999999999998884 479999999
Q ss_pred EEEecC-Ce-eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEE-------------Eeec----CChh---
Q 003029 671 FLRCTT-GK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVW-------------NYKY----ADVE--- 728 (856)
Q Consensus 671 ~i~~~~-~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~-------------~y~~----~d~e--- 728 (856)
.+...+ +. +.. .++ .+.+.++++......-...+...+..... .+.. .+.+
T Consensus 66 ~i~~~~~~~i~~~----~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T TIGR00099 66 AVIDDQGEILYKK----PLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLP 138 (256)
T ss_pred EEECCCCCEEeec----CCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhh
Confidence 998642 21 332 233 34445555443322111111111000000 0000 0000
Q ss_pred ---h-------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 729 ---F-------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 729 ---~-------~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
+ ......++.+.+ ........+.+ .++..++||.|+++|||.|++.++++++ +++++++|||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~G 211 (256)
T TIGR00099 139 DDILKILLLFLDPEDLDLLIEAL-NKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFG 211 (256)
T ss_pred cccceEEEEECCHHHHHHHHHHh-hhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeC
Confidence 0 001112333333 21000123554 4567899999999999999999999998 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCC
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
| +.||++| |+.+ +.+|.+++.
T Consensus 212 D-~~nD~~m-~~~~---~~~~a~~na 232 (256)
T TIGR00099 212 D-GMNDIEM-LEAA---GYGVAMGNA 232 (256)
T ss_pred C-cHHhHHH-HHhC---CceeEecCc
Confidence 9 9999999 8876 466777653
No 94
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.80 E-value=1.4e-17 Score=185.23 Aligned_cols=268 Identities=16% Similarity=0.054 Sum_probs=179.6
Q ss_pred CCCEEEEeCccch--hHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHH-----HHhhcCCEEEEeCHHHHHHHH
Q 003029 231 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 231 ~~DvIwvHDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il-----~~ll~aDlIgf~t~~~~~~Fl 303 (856)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|...+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3467777765544 33333333 367888888863111111110 0 11111 134568888887765444432
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH--hcCCceEEEeecccccCChHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET--FAGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~--~~~~~iIl~V~Rld~~KGi~~~ 381 (856)
. ..+ ... .++|+|+|...+.+. ...++. +.+++.++++||+.+.||+..+
T Consensus 160 ~----~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 111 111 789999998766430 011122 2355678999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|+..+.. ++.|+++|..... ..+.+.+.+. .+. ...|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~~-----~~~~~~~~~~-------~~~--~~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADHN-----TPYGKLLKEK-------AAA--DPRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCCc-----chHHHHHHHH-------hCC--CCcEE-EccccChHHHHHHHHhCC
Confidence 999987632 3568888754211 1233333321 111 11355 489999999999999999
Q ss_pred EEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 462 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 462 v~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
++++||.. ||||++++|||||+ .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+.++.++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999994 899999999988888778999988776 999999999976 46667777778
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 003029 541 THVT-THTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~-~~~~~~W~~~fl~~l 559 (856)
+.+. .+++..=++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 488888787777644
No 95
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.80 E-value=9.2e-18 Score=187.26 Aligned_cols=248 Identities=20% Similarity=0.180 Sum_probs=169.1
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC----ch-hhhhcCccc-------------HHHHHHhhcCCEE
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSR-------------SDLLRAVLAADLV 291 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~-e~fr~lp~~-------------~~il~~ll~aDlI 291 (856)
.+.|+|+++..... ...+ ..+..+..+++|.|.+ .. ......+.. ....+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 35789877653222 1112 3456778888898631 11 111111100 0112234678888
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeec
Q 003029 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (856)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~R 371 (856)
...+....+.+.+ ..+ . +..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~~~------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YYG------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----HhC------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8887766555532 111 1 246789999998775421 23567999999
Q ss_pred ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHH
Q 003029 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (856)
Q Consensus 372 ld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~ 451 (856)
+.+.||++.+++|++++ | +.|+++|. +++...+++ ... ..|.| .|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~~-------~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLRA-------KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHHh-------hcC--------CCEEE-ecCCCHH
Confidence 99999999999999865 3 33777763 333323322 110 13664 8999999
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCH
Q 003029 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
++.++|+.||++++||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999994 899999999988877 457999999999999999999998774
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHH
Q 003029 530 EEREKRHWHNFTHVTTHTAQEWAET 554 (856)
Q Consensus 530 ~er~~r~~~~~~~v~~~~~~~W~~~ 554 (856)
...+.+++.+..+++.+..++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREK 349 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHH
Confidence 122334555566776665554
No 96
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.79 E-value=1.4e-18 Score=181.92 Aligned_cols=188 Identities=15% Similarity=0.139 Sum_probs=121.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC---ceEEeeCc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 669 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---lgliaenG 669 (856)
+|++|+||||+++. ..+++.++++|++|.+ +|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 58999999999862 3345559999999986 799999999999999999999885 46999999
Q ss_pred eEEEecCCeeee-----cccccCChHHHHHHHHHHHHHHhcCCCc-EEee-----------------------ecceEEE
Q 003029 670 MFLRCTTGKWMT-----TMPEHLNMEWVDSLKHVFEYFTERTPRS-HFEQ-----------------------RETSLVW 720 (856)
Q Consensus 670 ~~i~~~~~~w~~-----~~~~~~~~~w~~~v~~i~~~~~~rt~gs-~ie~-----------------------k~~si~~ 720 (856)
+.|.... .|+. ......+ | +.+.++++...+...-. +... ......+
T Consensus 66 a~i~~~~-~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEE-LWREEPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCc-ccccCCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 9998521 1110 0001122 2 44555554332210000 0000 0000111
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 721 ~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
... .+++ ...++.+.+ .. ..+.+..+..++||.|++++||.|++++++++| +++++++|||| +
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 0111 112222223 21 245666677899999999999999999999999 67899999999 9
Q ss_pred cccccccccccccCcceEEe
Q 003029 801 GKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 801 ~nDe~M~f~~~~~~~~~v~V 820 (856)
.||++| |+++ +.+|.|
T Consensus 205 ~NDi~m-l~~a---g~~va~ 220 (221)
T TIGR02463 205 PNDLPL-LEVA---DYAVVI 220 (221)
T ss_pred HHHHHH-HHhC---CceEEe
Confidence 999999 8876 445544
No 97
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.79 E-value=2.3e-18 Score=179.61 Aligned_cols=189 Identities=14% Similarity=0.211 Sum_probs=124.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+|++|+||||++. +..++++++++|++|++ +|+.|+|+|||++..+..++..++ .++|++|
T Consensus 1 ik~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~N 65 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAEN 65 (215)
T ss_pred CcEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEcc
Confidence 479999999999976 45699999999999986 799999999999999999988884 3799999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
|+++...++. ....+ ....|...-... ..+....-...+. .....+... ... ...+...+ ..
T Consensus 66 Ga~i~~~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~--~~~-----~~~~~~~l-~~---- 127 (215)
T TIGR01487 66 GGVIFYNKED-IFLAN--MEEEWFLDEEKK-KRFPRDRLSNEYP--RASLVIMRE--GKD-----VDEVREII-KE---- 127 (215)
T ss_pred CcEEEeCCCc-EEEec--ccchhhHHHhhh-hhhhhhhcccccc--eeEEEEecC--Ccc-----HHHHHHHH-Hh----
Confidence 9999864322 11111 111111100000 0010000000000 011111111 111 11223333 21
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..+.+..+...+||.|.+++||.|+++++++++ ++.+++++||| +.||++| |+.+ +.+|.++|.
T Consensus 128 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~m-l~~a---g~~vam~na 191 (215)
T TIGR01487 128 RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDL-FRVV---GFKVAVANA 191 (215)
T ss_pred CCeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHH-HHhC---CCeEEcCCc
Confidence 245555566789999999999999999999999 56789999999 9999999 8866 678888775
No 98
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.79 E-value=1.6e-17 Score=180.79 Aligned_cols=246 Identities=20% Similarity=0.151 Sum_probs=167.7
Q ss_pred CCCEEEEeCc-cchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
..|+|++|++ ...++..+.+. . +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+...
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 4699999998 44444444433 3 78999999987653221 111111123334567888888877655554431
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
.+. ...++.++|+|+|.+.+.+.... .. .+ ....++.+|+++||+.+.||+..+++|+..+.
T Consensus 154 ~~~-----------~~~~~~vi~~~~~~~~~~~~~~~-----~~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LGI-----------PPDKIEVIYNPIDIEEIRALAEE-----PL-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hcC-----------CccccEEecCCcChhhcCcccch-----hh-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 110 14578899999998877643211 00 00 11246789999999999999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~ 469 (856)
++++++ .|+++|.+ +....++ +++.+.+.. ..|. +.+.+ +++..+|+.||++++||..
T Consensus 216 ~~~~~~----~l~i~G~~-----~~~~~~~----~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPDA----RLVILGDG-----PLREELE----ALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCCc----eEEEEcCC-----ccHHHHH----HHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 776654 47777632 2222333 344343321 1244 46664 4688999999999999999
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH---HHHHHHHHcC
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV---ANAIARALNM 527 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~l---A~ai~~aL~~ 527 (856)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.+++ +++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999994 899999999999888 467999999999999 4555555544
No 99
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.78 E-value=3.7e-18 Score=182.95 Aligned_cols=192 Identities=16% Similarity=0.131 Sum_probs=127.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCce
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~ 670 (856)
||++|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999862 2133468999999986 799999999999999999999885 489999999
Q ss_pred EEEecCCe------eeecccccCChHHHHHHHHHHHHHHhcCCCcEEe-eecc--------e-------EEEE--eecC-
Q 003029 671 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE-QRET--------S-------LVWN--YKYA- 725 (856)
Q Consensus 671 ~i~~~~~~------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie-~k~~--------s-------i~~~--y~~~- 725 (856)
+|...++. |. .....+ .+.+.++++.+..+.+..+.. .... . .... +...
T Consensus 66 ~i~~~~~~~~~~~~~~--~~~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPV--IALGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEE--EEcCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99863321 21 111223 256666666543321111100 0000 0 0000 0000
Q ss_pred --ChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC--cceEEEEecCCc
Q 003029 726 --DVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGHFLG 801 (856)
Q Consensus 726 --d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~--~d~vla~GD~~~ 801 (856)
+++ ....+.+.+ . ...+.+..+..++||.|+++|||.|+++++++++ ++ .+++++||| +.
T Consensus 141 ~~~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD-~~ 204 (256)
T TIGR01486 141 LWSEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD-SP 204 (256)
T ss_pred ecChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC-CH
Confidence 011 111222222 2 2245666666799999999999999999999998 56 889999999 99
Q ss_pred ccccccccccccCcceEEeCCCC
Q 003029 802 KNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 802 nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
||++| |+.+ +.+|.++|..
T Consensus 205 ND~~M-l~~a---g~~vam~Na~ 223 (256)
T TIGR01486 205 NDLPL-LEVV---DLAVVVPGPN 223 (256)
T ss_pred hhHHH-HHHC---CEEEEeCCCC
Confidence 99999 8865 7888887753
No 100
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.78 E-value=3.8e-17 Score=181.62 Aligned_cols=196 Identities=21% Similarity=0.303 Sum_probs=148.3
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccc--cCChHHHHHHHHHHHHh-CcCccCce
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 399 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~--~KGi~~~L~Af~~~l~~-~P~~~~~v 399 (856)
.++.++|+|||.+.|.+.. . ...++.+ .++++++++++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 5788999999998875431 1 1223333 34566766767654 89999999999988665 343 5
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCcCCChhHHH
Q 003029 400 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 478 (856)
Q Consensus 400 ~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~-~~el~aly~~ADv~v~~S~~EG~~Lv~lE 478 (856)
.++++|... ... . . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~----~--~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEI----P--P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhh----h--c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 577776422 100 0 0 111 1255 478888 88999999999999999999999999999
Q ss_pred HHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Q 003029 479 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 555 (856)
Q Consensus 479 ama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~f 555 (856)
||+| +.|+|+|+.+|..+.+ +.+|+++++.|++++|++|.++++.+ +++.++.+++++.+ ..++++..++.+
T Consensus 284 am~~----g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALAC----GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhc----CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999 4899999999988888 34799999999999999999999865 46777777788877 568999999988
Q ss_pred HHHHHH
Q 003029 556 VSELND 561 (856)
Q Consensus 556 l~~l~~ 561 (856)
++-+++
T Consensus 359 ~~~y~~ 364 (365)
T cd03825 359 LSLYEE 364 (365)
T ss_pred HHHHhh
Confidence 876653
No 101
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.78 E-value=4.3e-18 Score=180.16 Aligned_cols=191 Identities=16% Similarity=0.200 Sum_probs=127.5
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc----eEEeeC
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 668 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----gliaen 668 (856)
||++|+||||+++ +..+++.+ ++|+ +. ++|+.++|+|||+...+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999985 34466655 7777 44 57999999999999999999988743 499999
Q ss_pred ceEEEecCC-----eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecc--eEEEEeecCChhhhHHHHHHHHHHH
Q 003029 669 GMFLRCTTG-----KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 741 (856)
Q Consensus 669 G~~i~~~~~-----~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~--si~~~y~~~d~e~~~~qa~el~~~L 741 (856)
|+.|..... .|... ....|.. ..+ ..+....+|..++.+.. ...++|+.. ++.. ....++.+.+
T Consensus 64 Ga~i~~~~~~~~~~~~~~~----~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPELQPDRFWQKH----IDHDWRR--QAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRL 134 (236)
T ss_pred CceEEeCCCCCCChhHHHH----HhcCCCH--HHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHH
Confidence 999864211 12110 0111111 112 23333456655554432 345566543 2111 1122334444
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEe
Q 003029 742 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 742 ~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V 820 (856)
... ...+.+ ..+..++||.|+++|||.|++.|+++++ ++++++++||| +.||++| |+.+ +.+|.|
T Consensus 135 -~~~--~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~m-l~~~---~~~iav 200 (236)
T TIGR02471 135 -RQQ--SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEM-LRGL---TLGVVV 200 (236)
T ss_pred -Hhc--cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHH-HcCC---CcEEEE
Confidence 222 123444 4456789999999999999999999999 56889999999 9999999 8865 788889
Q ss_pred CCC
Q 003029 821 DSS 823 (856)
Q Consensus 821 ~~~ 823 (856)
++.
T Consensus 201 ~na 203 (236)
T TIGR02471 201 GNH 203 (236)
T ss_pred cCC
Confidence 875
No 102
>PLN02275 transferase, transferring glycosyl groups
Probab=99.77 E-value=6.4e-17 Score=182.69 Aligned_cols=242 Identities=12% Similarity=-0.011 Sum_probs=159.0
Q ss_pred CCCCEEEEeCccchh--HHHHHHhcCCCCeEEEEEecCCCchhhhhcC--cc----cHHHHHH-hhcCCEEEEeCHHHHH
Q 003029 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--PS----RSDLLRA-VLAADLVGFHTYDYAR 300 (856)
Q Consensus 230 ~~~DvIwvHDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~fr~l--p~----~~~il~~-ll~aDlIgf~t~~~~~ 300 (856)
...|+|++|..+.+. ++..+-.+..+.|+.+.+|..+.+.-..... +. ...+.+. .-.+|.|...+....+
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~ 178 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQH 178 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 356999999877532 2333323334678888888753211000000 00 0111122 2357888888876555
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHH
Q 003029 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 301 ~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~ 380 (856)
...+ ..| . ++.++|+|+ .+.|.+.... ..++ .+...+|+++||+.+.||+..
T Consensus 179 ~l~~----~~g------------~--~i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~~~ 230 (371)
T PLN02275 179 ELDQ----NWG------------I--RATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDFGI 230 (371)
T ss_pred HHHH----hcC------------C--CeEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCHHH
Confidence 4322 111 1 167889984 5677543210 0111 124467889999999999999
Q ss_pred HHHHHHHHHH-----------------hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 381 KLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 381 ~L~Af~~~l~-----------------~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
+++|+..+.. .+|+ +.|+++|. |++..++++.+ .+.+. ..+++
T Consensus 231 li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~~~~----~~~~l-------~~v~~ 290 (371)
T PLN02275 231 LLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQKAMYEEKI----SRLNL-------RHVAF 290 (371)
T ss_pred HHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCHHHHHHHH----HHcCC-------CceEE
Confidence 9999988742 2454 56888863 44444444444 33222 24777
Q ss_pred eCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
+.+.++.+++..+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |++++|
T Consensus 291 ~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la 364 (371)
T PLN02275 291 RTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSELA 364 (371)
T ss_pred EcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHHH
Confidence 777899999999999999999853 2489999999999994 899999999988888 56899996 699999
Q ss_pred HHHHHHH
Q 003029 519 NAIARAL 525 (856)
Q Consensus 519 ~ai~~aL 525 (856)
++|.++|
T Consensus 365 ~~i~~l~ 371 (371)
T PLN02275 365 DQLLELL 371 (371)
T ss_pred HHHHHhC
Confidence 9998875
No 103
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.75 E-value=2.3e-17 Score=178.49 Aligned_cols=197 Identities=13% Similarity=0.138 Sum_probs=128.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliae 667 (856)
.+|+|++|+||||+++ ...+++.++++|++|.+ .|+.|+|+|||+...+...+..+++ ++|+.
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~ 67 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVE 67 (273)
T ss_pred cceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEE
Confidence 4789999999999985 23467889999999986 7999999999999999999998853 79999
Q ss_pred CceEEEecCC--------------eeeecccccCChHHHHHHHHHHHHHHhcCCCcE-Eeee----cceEEEEee-----
Q 003029 668 NGMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH-FEQR----ETSLVWNYK----- 723 (856)
Q Consensus 668 nG~~i~~~~~--------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~-ie~k----~~si~~~y~----- 723 (856)
||++|...++ .|... ...+ .+.+.++++.+.......+ .... +.....++.
T Consensus 68 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (273)
T PRK00192 68 NGAAIYIPKNYFPFQPDGERLKGDYWVIE--LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESAR 142 (273)
T ss_pred cCcEEEecccccccCCccccccCCceEEE--cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHH
Confidence 9999985222 22211 1222 3455555544322111000 0000 000000000
Q ss_pred ---cCChh--h----hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCc-ceE
Q 003029 724 ---YADVE--F----GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI-DYV 793 (856)
Q Consensus 724 ---~~d~e--~----~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~-d~v 793 (856)
..... + .......+...+ . ...+.+..++.++||.|.+ +||.|+++++++++ +++ +++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~~~~v 210 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQDGVET 210 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccCCceE
Confidence 00000 0 001112222223 1 2346666677899999999 99999999999998 678 999
Q ss_pred EEEecCCcccccccccccccCcceEEeCCC
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
++||| +.||++| |+.+ +.+|.++|.
T Consensus 211 ~~~GD-s~NDi~m-~~~a---g~~vam~NA 235 (273)
T PRK00192 211 IALGD-SPNDLPM-LEAA---DIAVVVPGP 235 (273)
T ss_pred EEEcC-ChhhHHH-HHhC---CeeEEeCCC
Confidence 99999 9999999 8766 677777764
No 104
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.74 E-value=4.5e-17 Score=189.69 Aligned_cols=197 Identities=14% Similarity=0.157 Sum_probs=128.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
++|+||+|+||||++. ...++++++++|++|.+ +|+.|+++|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 6899999999999986 23466789999999986 799999999999999999998885 479999
Q ss_pred CceEEEecCCeee-------------ecccccCChHHHHHHHHHHHHHHhcCC----------CcEEeeecceEEEE---
Q 003029 668 NGMFLRCTTGKWM-------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRETSLVWN--- 721 (856)
Q Consensus 668 nG~~i~~~~~~w~-------------~~~~~~~~~~w~~~v~~i~~~~~~rt~----------gs~ie~k~~si~~~--- 721 (856)
||+.|...++ |. .+.....+ .+.+.++++...+... +.++.... ...++
T Consensus 480 NGA~I~~~~~-~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~ 554 (694)
T PRK14502 480 NGGAIFIPKD-YFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVS 554 (694)
T ss_pred CCCEEEECCC-cccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHH
Confidence 9999986332 11 01111223 2344444443332110 11111100 00000
Q ss_pred -eecCChhh----------------h-HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcC
Q 003029 722 -YKYADVEF----------------G-RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHS 783 (856)
Q Consensus 722 -y~~~d~e~----------------~-~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~ 783 (856)
+.....+. + .....++.+.+ . ...+++..|..++||. .++|||.|++.|++.++
T Consensus 555 ~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~g-- 626 (694)
T PRK14502 555 RLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNELFR-- 626 (694)
T ss_pred HhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHhC--
Confidence 00000000 0 01122333333 2 2256677799999999 59999999999999998
Q ss_pred CcCCCCcceEEEE--ecCCcccccccccccccCcceEEeCCC
Q 003029 784 KKMKTAIDYVLCI--GHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 784 ~~~~~~~d~vla~--GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
++.+++++| || +.||++| |+++ +.+|.|++.
T Consensus 627 ----I~~~eViafalGD-s~NDisM-Le~A---g~gVAM~~~ 659 (694)
T PRK14502 627 ----LNFGNIHTFGLGD-SENDYSM-LETV---DSPILVQRP 659 (694)
T ss_pred ----CCccceEEEEcCC-cHhhHHH-HHhC---CceEEEcCC
Confidence 556788888 99 9999999 8877 567777543
No 105
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.74 E-value=1e-16 Score=170.15 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=127.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+||+|+||||+++ ....++.++++|++|.+ .|+.|+++|||+...+..+...++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 489999999999986 34577889999999996 799999999999999999999885 4899999
Q ss_pred ceEEEecCCeeeec-c-c---ccCChHH-------HHHHHHHHHHHHhcCCCcEE------------------------e
Q 003029 669 GMFLRCTTGKWMTT-M-P---EHLNMEW-------VDSLKHVFEYFTERTPRSHF------------------------E 712 (856)
Q Consensus 669 G~~i~~~~~~w~~~-~-~---~~~~~~w-------~~~v~~i~~~~~~rt~gs~i------------------------e 712 (856)
|+.|..... |... . + ...+..| ...++.+++.........+. .
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985322 3210 0 0 0011111 33444444433222111110 0
Q ss_pred eecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe------------------C---CCCHHH
Q 003029 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 771 (856)
Q Consensus 713 ~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p------------------~---gvnKG~ 771 (856)
.++.|-.+.+...+.. +.+.+ ....+.+++|..++.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~--------~~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPAR--------LREAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHH--------HHHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 1233333444332211 12222 223678888888887776 5 899999
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
|++.|.+.+.... .++ .++++|| +.||++| ++++ .+.|.|.+
T Consensus 212 A~~~L~~~y~~~~---~~~-~tiaLGD-spND~~m-Le~~---D~~vvi~~ 253 (302)
T PRK12702 212 AVQLLLDCYQRHL---GPI-KALGIGC-SPPDLAF-LRWS---EQKVVLPS 253 (302)
T ss_pred HHHHHHHHHHhcc---CCc-eEEEecC-ChhhHHH-HHhC---CeeEEecC
Confidence 9999999987311 112 6899999 9999999 8877 34555533
No 106
>PLN02382 probable sucrose-phosphatase
Probab=99.73 E-value=3.9e-17 Score=185.76 Aligned_cols=203 Identities=16% Similarity=0.200 Sum_probs=129.5
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHH-HHhhcCCCCeEEEEcCCCHhhHHHHhccc----C
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY----N 661 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~ 661 (856)
..+.+-+|++|+||||++..+ ...+++....+| +++.+ +|+.++++|||+...+.++.+.+ +
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p 71 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTP 71 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 345678999999999997631 235665566666 87775 79999999999988887776665 3
Q ss_pred ceEEeeCceEEEecC-----CeeeecccccCChHHHH-HHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHH
Q 003029 662 LWLAAENGMFLRCTT-----GKWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (856)
Q Consensus 662 lgliaenG~~i~~~~-----~~w~~~~~~~~~~~w~~-~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~ 735 (856)
..+|+.||+.|...+ ..|...+ +..|.. .+.+.+..|.........+.+-..+.+.+... + .....+
T Consensus 72 ~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~--~-~~~~~~ 144 (413)
T PLN02382 72 DITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK--K-AQEVIK 144 (413)
T ss_pred CEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH--H-hHHHHH
Confidence 458888999997522 1233222 223332 12222322211111122233333444443321 1 111123
Q ss_pred HHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHh---CcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 736 DMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 736 el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l---~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
++.+.+ .. ....+.+ .+++.++||.|+++|||.|+++|++++ | ++++.+++||| +.||++| |+.+
T Consensus 145 ~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g------i~~~~~iafGD-s~NDleM-l~~a 213 (413)
T PLN02382 145 ELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG------KAPVNTLVCGD-SGNDAEL-FSVP 213 (413)
T ss_pred HHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC------CChhcEEEEeC-CHHHHHH-HhcC
Confidence 333333 21 1224454 457789999999999999999999999 6 67899999999 9999999 8875
Q ss_pred ccCc-ceEEeCCC
Q 003029 812 MQTI-STVRLDSS 823 (856)
Q Consensus 812 ~~~~-~~v~V~~~ 823 (856)
+ .+|.|+|.
T Consensus 214 ---g~~gvam~NA 223 (413)
T PLN02382 214 ---DVYGVMVSNA 223 (413)
T ss_pred ---CCCEEEEcCC
Confidence 4 57888775
No 107
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.73 E-value=9e-16 Score=175.73 Aligned_cols=299 Identities=22% Similarity=0.219 Sum_probs=203.3
Q ss_pred CCCEEEEeCccchhHHHHHHhc---CCCCeEEEEEecC-----CC-chhhhhcCccc-------------HHHHHHhhcC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPSR-------------SDLLRAVLAA 288 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~fr~lp~~-------------~~il~~ll~a 288 (856)
.+|||++||||+-++|.++++. ...++.+|++|.- |+ .......||.. .-+-.++..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5799999999999999999997 7789999999963 33 11222344421 2233457788
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC-------Cch----HHHHHHHH
Q 003029 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-------NPV----QVHIKELQ 357 (856)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~-------~~~----~~~~~~lr 357 (856)
|.|..-++.|++.... ...|. .-...+++ +.-++.-|=||||.+...+.... .++ .+....|.
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888888775441 11110 00011122 22467777889987766553211 001 11223355
Q ss_pred HHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003029 358 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (856)
Q Consensus 358 ~~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (856)
++++ +.+++..|+||...||++.+++|+..+++.. + .|+++|.+. ..+++.+..++.++..+
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~----~~vilG~gd-------~~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--W----QLVLLGTGD-------PELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--c----eEEEEecCc-------HHHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999876 3 477777531 25677888888876653
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-c--------
Q 003029 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 503 (856)
Q Consensus 433 ~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g-------- 503 (856)
+ .+.-..+..-...+|..||++++||..|++||+-++||.-+ .++|+++.+|.++.+ .
T Consensus 351 ~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 V---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred E---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 2 12334466777889999999999999999999999999994 799999999999987 2
Q ss_pred -CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHh
Q 003029 504 -AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 -~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~l~~~ 562 (856)
.+|+++.|.|+++++.+|.+|+........ .++...... ..++|+.=+.++++-.+..
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHH
Confidence 358999999999999999999975432111 022222222 3455555566665555544
No 108
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.72 E-value=1.6e-15 Score=174.29 Aligned_cols=285 Identities=15% Similarity=0.132 Sum_probs=176.9
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHh-cCCCCeEEEEEecCCC-chhhhhcCcccHHHHHHhh-cCCEEEEeCHHHH
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 299 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~fr~lp~~~~il~~ll-~aDlIgf~t~~~~ 299 (856)
.++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 344555565 89998877765 444432 2335677665554222 22222211 22333333 5799999998877
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCCh
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi 378 (856)
+.+.. +|.. .. +.++|++ +.+.+... ........+++.+ +++++++++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77653 2321 22 5566763 33322211 1112234566666 678899999875 6889
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcc---cCC--C--CcccEEEeCCCCCH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGR---FGT--L--TAVPIHHLDRSLDF 450 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~-~~l~~~l~~lv~~IN~~---~g~--~--~~~pV~~~~g~v~~ 450 (856)
..+|+||.++.+++|+++ |+++| ++++. .+++ +++.+.+-. |.. . .-..|. +.+ +.
T Consensus 247 ~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~----~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~ 310 (425)
T PRK05749 247 ELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVE----ELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TM 310 (425)
T ss_pred HHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHH----HHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cH
Confidence 999999999988888754 77664 34443 3344 444332221 100 0 000122 222 35
Q ss_pred HHHHHHHHHccEEEE-CCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-chh---hccCCeEEECCCCHHHHHHHHHHHH
Q 003029 451 PALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ---SLGAGAILVNPWNITEVANAIARAL 525 (856)
Q Consensus 451 ~el~aly~~ADv~v~-~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-~~~---~lg~~g~lVnP~d~~~lA~ai~~aL 525 (856)
.++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...| ..+ .+..+|.++.|.|++++|++|.+++
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh
Confidence 799999999999665 688899999999999994 8888876543 222 2235688888999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 526 NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 526 ~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
++ ++.+.++++++++++.++. .-.+..++.+.
T Consensus 387 ~~-~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 387 TD-PDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred cC-HHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 85 4578888888899987762 33444544444
No 109
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.71 E-value=4.2e-17 Score=171.29 Aligned_cols=192 Identities=15% Similarity=0.145 Sum_probs=119.5
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEeeCce
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 670 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliaenG~ 670 (856)
+|++|+||||++.. .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999852 245679999999996 6999999999999999999988864 79999999
Q ss_pred EEEecCC-------------eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce-EEEEeecCChhhh------
Q 003029 671 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS-LVWNYKYADVEFG------ 730 (856)
Q Consensus 671 ~i~~~~~-------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s-i~~~y~~~d~e~~------ 730 (856)
+|..... .. .++...++ .+.++++++...+..+-.++..-... +. .+....++..
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~-~i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 139 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNY-EVIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVE-KLTGLPRELAPLAKRR 139 (225)
T ss_pred EEEecCccccccccccccCCCe-EEEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHH-HHHCcCHHHHHHHHhh
Confidence 9986321 11 11111233 33445555433321111110000000 00 0000000000
Q ss_pred ----------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 731 ----------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 731 ----------~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
..+..++.+.+ . ...+.++++..++++. .++|||.|++.+++.++.. .+.+.++|||| +
T Consensus 140 ~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD-~ 208 (225)
T TIGR02461 140 EYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD-S 208 (225)
T ss_pred hcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC-C
Confidence 01112233333 1 2356777777778875 4999999999999998731 24568999999 9
Q ss_pred cccccccccccccCcceEEe
Q 003029 801 GKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 801 ~nDe~M~f~~~~~~~~~v~V 820 (856)
.||++| |+++ +.+|.|
T Consensus 209 ~nD~~m-l~~a---g~~v~v 224 (225)
T TIGR02461 209 ENDFPM-FEVV---DLAFLV 224 (225)
T ss_pred HHHHHH-HHhC---CCcEec
Confidence 999999 9877 445544
No 110
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.70 E-value=1.9e-16 Score=158.22 Aligned_cols=156 Identities=27% Similarity=0.356 Sum_probs=120.6
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 361 ~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~-~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
.++++|+++||+++.||+..+++|+..+.++ .|+ +.|+++|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----cccc----ccccccccccccc------c
Confidence 4789999999999999999999999999875 555 45777751 2222 2333333333221 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~l 517 (856)
.+.+ .+.++.+++.++|+.||++|.||..||||++++|||+| +.|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~----g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC----GCPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT----T-EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceecccccccccccccccccccc----ccceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3665 67778999999999999999999999999999999999 4899999988888877 457899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 518 ANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 518 A~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
+++|.+++.++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 466666665554
No 111
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.64 E-value=5.6e-16 Score=165.08 Aligned_cols=196 Identities=17% Similarity=0.288 Sum_probs=124.3
Q ss_pred CeEEEEecCCccC-CCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc----CceEE
Q 003029 591 NRLLILGFNATLT-EPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 665 (856)
Q Consensus 591 ~rLI~lD~DGTL~-~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~lgli 665 (856)
++||++|+||||+ .+ ..-..++.+.++ ....+++.++++|||+.+.+.+.+... +.++|
T Consensus 2 ~~ll~sDlD~Tl~~~~---------------~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I 65 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD---------------DEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYII 65 (247)
T ss_dssp SEEEEEETBTTTBHCH---------------HHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEE
T ss_pred CEEEEEECCCCCcCCC---------------HHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEE
Confidence 5899999999999 32 122356666666 333579999999999999999888875 45899
Q ss_pred eeCceEEEecC-----CeeeecccccCChHHH-HHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 666 AENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 666 aenG~~i~~~~-----~~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
+.+|+.|.... ..|...+ +..|. +.+.+++..+..-.+..-.+.....+.+.+...+.. ....++.+
T Consensus 66 ~svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~ 138 (247)
T PF05116_consen 66 TSVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRA 138 (247)
T ss_dssp ETTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHH
T ss_pred ecCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHH
Confidence 99999998621 1243322 22343 345555554432111111122233445555443322 12344555
Q ss_pred HHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE
Q 003029 740 HLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV 818 (856)
Q Consensus 740 ~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v 818 (856)
.+ .. ....+.++. +...++|.|+++|||.|+++|+++++ ++.+.|+++|| +.||.+| |. ....+|
T Consensus 139 ~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~m-L~---~~~~~v 204 (247)
T PF05116_consen 139 RL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEM-LE---GGDHGV 204 (247)
T ss_dssp HH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHH-HC---CSSEEE
T ss_pred HH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHH-Hc---CcCCEE
Confidence 55 22 233455554 56789999999999999999999998 67899999999 9999999 74 446788
Q ss_pred EeCCC
Q 003029 819 RLDSS 823 (856)
Q Consensus 819 ~V~~~ 823 (856)
.|+|.
T Consensus 205 vV~Na 209 (247)
T PF05116_consen 205 VVGNA 209 (247)
T ss_dssp E-TTS
T ss_pred EEcCC
Confidence 99884
No 112
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.60 E-value=1.8e-14 Score=153.52 Aligned_cols=168 Identities=17% Similarity=0.198 Sum_probs=135.2
Q ss_pred eeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEE
Q 003029 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (856)
Q Consensus 324 ~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv 402 (856)
...+|.++||-|+++.|.|...+ +. .+...|+.++||.|.||++.++..+.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999874321 12 345789999999999999999999999999999865 77
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 403 ~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
++| |||....+++.+++. +- ..+|. +.|.++++++...|..-|||+.||+.|.|+++++||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 664 666555555555544 11 13566 489999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcC
Q 003029 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
|.++|.+..+|..+.|..+-+...+-.++++++++.++++.
T Consensus 295 ----GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 295 ----GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred ----CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 48899999999999994343445566788999999888863
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.59 E-value=2.3e-13 Score=153.97 Aligned_cols=264 Identities=17% Similarity=0.135 Sum_probs=164.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
+..++|.+..-...+... .+..++++-+|-.|+..... -+.. ...-..+..||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 456778875544444333 45667777666544422110 0111 11122345789988777755443211
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
+ + .++.++|+|+|.+.|.+....+.. .+.+. ..++++|+|+|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 467889999999999764321110 01111 24678999999999966664 44443 3
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~- 468 (856)
+.+|++. |++||... ...+ ...+ .. ...|++ .|.++.+++.++|+.||++++|+.
T Consensus 228 ~~~p~~~----~vliG~~~--~~~~-------~~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS----FVLIGPVD--VSID-------PSAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE----EEEECCCc--CccC-------hhHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4577764 77777431 0000 0111 00 123664 799999999999999999999986
Q ss_pred ----CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 469 ----~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
.+++++.++|||||| .|+|+|....+.+.. . +..+.+.|+++++++|.++|..+..++..+. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~~-~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRYE-D-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhhc-C-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999994 888888765544332 3 3444467999999999998765543433322 23688
Q ss_pred hcCHHHHHHHHHHHHHH
Q 003029 545 THTAQEWAETFVSELND 561 (856)
Q Consensus 545 ~~~~~~W~~~fl~~l~~ 561 (856)
+|||+.=++.+++.|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 99999888888866653
No 114
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.54 E-value=2e-12 Score=146.77 Aligned_cols=217 Identities=10% Similarity=0.051 Sum_probs=139.9
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (856)
.+|.+...+....+.+.. .|. ...++.+++++||++.+.+. + ....+|+++ +++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 578887766544333321 122 23467788999987543321 1 122355665 367
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh----CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~----~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
++|+++||....||+..+++++..++.. .|+ +.++++++. ++ .+++++++... + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G~----~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICGR----NK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEECC----CH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 233 333334421 22 22333333210 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-----CCchhhccCCeEEECCCCH
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 514 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-----aG~~~~lg~~g~lVnP~d~ 514 (856)
.|+ +.|+++ ++..+|++||++|.+| .|++++|||||+ .|+|++.. .|.++.+-.+|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 355 467774 7999999999999866 378999999994 89999985 2333444123333345899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
++++++|.++|.++++.+.++.++++++...+.+..-++..++.
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 99999999999975557777777778877766665555544433
No 115
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.44 E-value=7.3e-12 Score=141.86 Aligned_cols=249 Identities=14% Similarity=0.116 Sum_probs=168.7
Q ss_pred HHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--
Q 003029 283 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 360 (856)
Q Consensus 283 ~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-- 360 (856)
+....+|.+.-.++-..+.|.. .+..++. ..+.+...+||.+.+.+...... .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~---~~~~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKA---TFVSLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhh---hhhhcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 4456678775555433344332 2222221 12556667788776653111000 00011111111
Q ss_pred -cCCceEEEeecccccCChHHHHHHHHHHHHhCcCcc-CceEEEEEEcC-CCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 361 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 361 -~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~-~~v~Lv~v~~p-~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
..+.++..+-|+.|.||+...|.||..+...-|+.. ....++..+.+ +.+...+...+.+++.+++++.+- +|
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC---
Confidence 237889999999999999999999999988775411 13455545532 223334445556677777766432 12
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHH
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 515 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~ 515 (856)
.+++|..+.++.+...++..+.+.+.++..|.||+|++|||||+ .|+|++..+|-++.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 35556778888888888889999999998999999999999994 999999999999988 789999999 666
Q ss_pred ---HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHh
Q 003029 516 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDT 562 (856)
Q Consensus 516 ---~lA~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~ 562 (856)
.+|++|.++.+++. .+.+++++++++|.+ +++ ..|.+.+...
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~ 464 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASV 464 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHH
Confidence 59999999999765 688899999999977 666 4455554444
No 116
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.40 E-value=2.6e-11 Score=130.55 Aligned_cols=198 Identities=25% Similarity=0.340 Sum_probs=143.7
Q ss_pred EEEEeecccChhhhhhh-hcCCchHHHHHHHHHHhcC--CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 327 ~v~viP~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
++.++|+|++++.+... ... ..+ ..+++++||+.+.||+...++|+..+....++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIGL-------------LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccCC-------------CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67789999999987642 100 112 36999999999999999999999999887665 44666
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
+|..... ...+.. ++...+.. ..|.+ .|.++.+++..+|+.||++++||..||||++++|||+|+
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 122222 33332221 13554 888898899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCchhhccCC--eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003029 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~--g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (856)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..=+..++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 899999999888888443 78888888999999999999887 34444444344444 57776666655555444
Q ss_pred H
Q 003029 561 D 561 (856)
Q Consensus 561 ~ 561 (856)
.
T Consensus 376 ~ 376 (381)
T COG0438 376 E 376 (381)
T ss_pred H
Confidence 3
No 117
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.39 E-value=1.2e-10 Score=131.89 Aligned_cols=269 Identities=13% Similarity=0.083 Sum_probs=161.8
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHH
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~F 302 (856)
.++++..+| |+|++| +....++.+.+....++|+...+ +-|-. + ...+ .-.+|.+...+....+.+
T Consensus 97 ~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~---~~~ad~i~~~s~~~~~~l 162 (380)
T PRK13609 97 KLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWV---HREVDRYFVATDHVKKVL 162 (380)
T ss_pred HHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-cccc---cCCCCEEEECCHHHHHHH
Confidence 444444554 899985 55556776666555567765332 22211 0 0111 125788887776544443
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc---CCc-eEEEeecccccCCh
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKGI 378 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-iIl~V~Rld~~KGi 378 (856)
.+ .|. ...++.++++.++. .|.... + ...++++++ +++ ++++.|++...||+
T Consensus 163 ~~-----~gi-----------~~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 163 VD-----IGV-----------PPEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred HH-----cCC-----------ChhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 32 122 12345554444432 243211 1 112455552 444 55567899999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
..+++++.. .|+ +.++++++. +.+ +++++++++...+ ..|++ .|+++ ++..+|+
T Consensus 219 ~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~~--~~~~l~~ 272 (380)
T PRK13609 219 KELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYVE--NIDELFR 272 (380)
T ss_pred HHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eechh--hHHHHHH
Confidence 999888742 354 446666532 122 3344555443322 13665 57764 6889999
Q ss_pred HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-CCCc----hhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~----~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
+||+++. ++.|++++|||||+ .|+|++. ..|. +..+...|..+.+.|+++++++|.++++++ +.+.
T Consensus 273 ~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~ 343 (380)
T PRK13609 273 VTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKLL 343 (380)
T ss_pred hccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHHH
Confidence 9999874 45589999999994 8888876 4442 122323455556789999999999999864 4666
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003029 534 KRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (856)
Q Consensus 534 ~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (856)
++.++.++....+++...++.+++.+...+.
T Consensus 344 ~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 344 QMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 6667777777778888888888877765543
No 118
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.33 E-value=1.2e-10 Score=129.87 Aligned_cols=245 Identities=17% Similarity=0.145 Sum_probs=150.1
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
+++..+ .|+|+.|.....+ +..+..+..+.|+.++.|..+|. .. +.++ ...+|.|...++...+.
T Consensus 84 ~i~~~~-pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--- 148 (350)
T cd03785 84 ILKKFK-PDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--- 148 (350)
T ss_pred HHHhcC-CCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---
Confidence 334344 5999998755433 33333344467776655554542 10 1111 12367777665533221
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~ 381 (856)
-...++.++|+|+|.+.+.+.. . ++++ .++++|+.+++....|+...+
T Consensus 149 ------------------~~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~ 199 (350)
T cd03785 149 ------------------FPKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEA 199 (350)
T ss_pred ------------------CCCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHH
Confidence 0134778899999988765321 0 2222 367788889888888888765
Q ss_pred H-HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 382 L-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 382 L-~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+ +|++.+.+ ++ +.++.++++ + +.+++++.++ +. + ..|++ .+.+ +++..+|+.|
T Consensus 200 l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~l~~~~~----~~----~----~~v~~-~g~~--~~~~~~l~~a 253 (350)
T cd03785 200 VPEALAELLR--KR----LQVIHQTGK----G-DLEEVKKAYE----EL----G----VNYEV-FPFI--DDMAAAYAAA 253 (350)
T ss_pred HHHHHHHhhc--cC----eEEEEEcCC----c-cHHHHHHHHh----cc----C----CCeEE-eehh--hhHHHHHHhc
Confidence 5 77776642 22 334333322 2 2233433332 21 1 12553 5655 7899999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCC--CHHHHHHHHHHHHcCC
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMS 528 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG--------~~~~l--g~~g~lVnP~--d~~~lA~ai~~aL~~~ 528 (856)
|+++.+| | +.+++|||+|+ .|+|++...| .++.+ +..|++|+|. |+++++++|.++++.
T Consensus 254 d~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 254 DLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-
Confidence 9999877 3 57899999994 8888876543 13444 3468999987 999999999999974
Q ss_pred HHHHHHHHHHHHHHHHhcCH
Q 003029 529 PEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 529 ~~er~~r~~~~~~~v~~~~~ 548 (856)
++.+.++..++++++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 325 PERLKAMAEAARSLARPDAA 344 (350)
T ss_pred HHHHHHHHHHHHhcCCCCHH
Confidence 55677777777777655443
No 119
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.33 E-value=8.7e-11 Score=131.78 Aligned_cols=252 Identities=16% Similarity=0.084 Sum_probs=158.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|+.|+....+.+. +..+..+.|+.++.|..+|.. .+.++ ...+|.+...+++. +. .
T Consensus 91 ~pDvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~~----~-- 150 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---FP----E-- 150 (357)
T ss_pred CCCEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---hh----c--
Confidence 36999999855444433 333445678887666544421 01111 11356555444311 10 0
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCChHHHH-HHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi~~~L-~Af~~~ 388 (856)
....++.++|+|||.+.+.+. ... ..+ .. .+.++|+.+|+....|++..++ +|+.++
T Consensus 151 ------------~~~~~i~vi~n~v~~~~~~~~----~~~---~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 151 ------------FFKPKAVVTGNPVREEILALA----APP---ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ------------cCCCCEEEECCCCChHhhccc----chh---hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 123578999999998765431 100 111 11 3678889999999999987776 888877
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+. | ..++++|. ++ .+++.+.+ . . + .. |. +.+++ +++..+|+.||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~~----~-~----~---~~-v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAAY----A-A----G---IN-AE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHHh----h-c----C---Cc-EE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 23555543 22 12222222 1 1 1 11 44 46665 68999999999999887
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHH
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG--------~~~~l--g~~g~lVnP~d--~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
| +.+++|||+|+ .|+|++...| .++.+ +..|++++|.| +++++++|.+++++ ++.+..+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 7888875532 12334 34688998888 99999999999997 45777777
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 537 WHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
++++++.+.++...-++.+++.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 888888777777777777766543
No 120
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.32 E-value=5.8e-11 Score=122.01 Aligned_cols=118 Identities=27% Similarity=0.313 Sum_probs=86.1
Q ss_pred EeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 003029 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (856)
Q Consensus 368 ~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~ 447 (856)
++||+.+.||+..+++|+..+.+++|++ .++++|... + .. .....+... +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~-~~--~~~~~~~~~--------~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--E-RE--YLEELLAAL--------LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--C-hH--HHHHHHHhc--------CC--cccEEE-eCC
Confidence 9999999999999999999998887764 588777432 1 11 111111111 11 124665 556
Q ss_pred C-CHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEE
Q 003029 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (856)
Q Consensus 448 v-~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lV 509 (856)
+ +.+++..+++.||++++||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666777777999999999999999999999994 899999999988766 3456653
No 121
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.30 E-value=2.4e-11 Score=121.66 Aligned_cols=194 Identities=18% Similarity=0.218 Sum_probs=118.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc---CceEEe
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 666 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~lglia 666 (856)
..+|||+|+||||++...+| +.....|.+|. |.|..|++||..+...+..+-+.+ +..+|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~-d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELK-DAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHH-HcCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35899999999999964433 23566777877 479999999999999998888887 468999
Q ss_pred eCceEEEecCCeeeec--cc------ccCCh-HHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChh-hh------
Q 003029 667 ENGMFLRCTTGKWMTT--MP------EHLNM-EWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVE-FG------ 730 (856)
Q Consensus 667 enG~~i~~~~~~w~~~--~~------~~~~~-~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e-~~------ 730 (856)
|||+.|..+ +.|... .+ ..... .-.+.+++.++...+. -|. ..|.++|.+ ..
T Consensus 70 EnG~aI~~p-~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~-~g~----------~~~~~~d~~ei~e~TGlp 137 (274)
T COG3769 70 ENGAAIYLP-KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEH-FGF----------TTFDDVDDEEIAEWTGLP 137 (274)
T ss_pred cCCceEEec-ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHH-hCe----------eEeccCCHHHHHHHhCCC
Confidence 999999842 223210 00 00000 0123333333332221 110 011122111 00
Q ss_pred -----HHHHH------------HHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE
Q 003029 731 -----RIQAR------------DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (856)
Q Consensus 731 -----~~qa~------------el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v 793 (856)
..+.. +...++ ...+....+++++|..+--|....-.||.|++.+++.+..- ....-+
T Consensus 138 re~aaLa~~rEyseti~~rs~d~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t 212 (274)
T COG3769 138 REQAALAMLREYSETIIWRSSDERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTT 212 (274)
T ss_pred hHHhHHHHHHHhhhheeecccchHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEE
Confidence 00001 111111 22223357889999888888888888999999999976521 223458
Q ss_pred EEEecCCcccccccccccccCcceEE
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVR 819 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~ 819 (856)
++.|| +.||.+| |+++ ..++.|+
T Consensus 213 ~~~GD-g~nD~Pl-~ev~-d~AfiV~ 235 (274)
T COG3769 213 LGLGD-GPNDAPL-LEVM-DYAFIVK 235 (274)
T ss_pred EecCC-CCCcccH-HHhh-hhheeec
Confidence 99999 9999999 9977 3455554
No 122
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.30 E-value=1.1e-09 Score=116.57 Aligned_cols=310 Identities=13% Similarity=0.200 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHH---HhcC-CCCEEEEeC--ccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH
Q 003029 211 FAAYIKANQMFADVVN---KHYK-DGDVVWCHD--YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~---~~~~-~~DvIwvHD--yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ 284 (856)
|..+.-.-|+.+.-|+ .+++ ++| |||-. |.+. .|.+ |. +.+.|||...|.|--|.+.+..+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 4444444444443333 2344 556 47743 4433 3333 22 56899999999998888876554332111 1
Q ss_pred hhcCCEEEEeCHHHHHHHHHH------HHHHhCcccC--CCce-e-eCCeeEEEEEeecccChhhhhhhhcCCchHHHHH
Q 003029 285 VLAADLVGFHTYDYARHFVSA------CTRILGFEGT--PEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354 (856)
Q Consensus 285 ll~aDlIgf~t~~~~~~Fl~~------~~~~lg~~~~--~~~v-~-~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~ 354 (856)
+..+---.|-|.|..- |..+.-+..+ .+.| + ++. ..+.++.+-.+++.+.....+
T Consensus 200 -----~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~~t-------- 264 (465)
T KOG1387|consen 200 -----ILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKFGT-------- 264 (465)
T ss_pred -----hhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHhcc--------
Confidence 1111122344444321 1111101100 0111 1 222 233333333555544332211
Q ss_pred HHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcC--ccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003029 355 ELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (856)
Q Consensus 355 ~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~--~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (856)
.-.....+|+||.+.|.|+.. .|+-++.++.+.|. ....+.|+++|+ .|+.. ++ +.-+.++.++.+++-.
T Consensus 265 ----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRnee-D~-ervk~Lkd~a~~L~i~ 336 (465)
T KOG1387|consen 265 ----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNEE-DE-ERVKSLKDLAEELKIP 336 (465)
T ss_pred ----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCChh-hH-HHHHHHHHHHHhcCCc
Confidence 012457899999999999999 78888888888887 345688887764 45432 22 2334556666666543
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-hc----c-CCe
Q 003029 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL----G-AGA 506 (856)
Q Consensus 433 ~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~l----g-~~g 506 (856)
..|.| ...+|.+++..+|..|.+.+-+-..|-||+.+.||||++ ..+|+-..+|-.- .+ | .+|
T Consensus 337 ------~~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~tG 405 (465)
T KOG1387|consen 337 ------KHVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETTG 405 (465)
T ss_pred ------cceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCccce
Confidence 13664 789999999999999999999999999999999999993 4444444444332 22 4 368
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 507 ~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
++. | +.++.|++|.+++++..++|..+.+.+|..+.+++-+...+.|...+...
T Consensus 406 Fla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 406 FLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 887 3 56789999999999999998888888899999888888777777655543
No 123
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.26 E-value=2.2e-10 Score=127.53 Aligned_cols=181 Identities=16% Similarity=0.127 Sum_probs=118.6
Q ss_pred EEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCChHHH-HHHHHHHHHhCcCccCceEEEEEEc
Q 003029 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 329 ~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi~~~-L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
.++|+|+|...+.+.. + ...+ .+ ++.++|+++||....|++..+ ++|++.+.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~~--~-----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P-----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhcccc--h-----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 6889999976554210 0 0111 12 367789999998889997664 4788776542 22 2333432
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+++. .. +++.+.+.+. ..++.+. . .++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-~~----l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-EK----VKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-HH----HHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 23 3333333221 1233333 2 37899999999999875 4 78999999994
Q ss_pred CceEEEeCCCCc-------hhhc--cCCeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 487 KGVLILSEFAGA-------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 487 ~g~lVlSe~aG~-------~~~l--g~~g~lVnP~d--~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
.|+|++...|. ++.+ +.+|++++|.| +++++++|.+++++ ++.++++.+++++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 88998877552 2344 45799999876 99999999999975 5577777788888777776666554
No 124
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.23 E-value=1.1e-09 Score=123.34 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=144.2
Q ss_pred HhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHHH
Q 003029 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (856)
Q Consensus 227 ~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl~ 304 (856)
+..+ +|+|++|......+...+-....++|+++..+.. -+.+.+. |+.+++.+-+. .+|++.-.+....+++++
T Consensus 83 ~~~~-pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~ 158 (365)
T TIGR00236 83 LEEK-PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR 158 (365)
T ss_pred HHcC-CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 3344 4999999544433433333333467876532221 1111111 12222222211 256665566655555442
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc-CCceEEEe-eccc-ccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGV-DRLD-MIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V-~Rld-~~KGi~~~ 381 (856)
.|. ...+|.++++|+....+...... ....++++++ ++.+++.. .|.. ..||+..+
T Consensus 159 -----~G~-----------~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~l 217 (365)
T TIGR00236 159 -----ENV-----------KADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENI 217 (365)
T ss_pred -----cCC-----------CcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHH
Confidence 122 34578999999633322221110 1123444453 33455554 4643 45999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|+..+.+++|+++ +++++.|. +. .+.++. ..++. ...|+ +.+.++..++..+|+.||
T Consensus 218 l~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~~---~~~~~------~~~v~-~~~~~~~~~~~~~l~~ad 276 (365)
T TIGR00236 218 FKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPLH---KHLGD------SKRVH-LIEPLEYLDFLNLAANSH 276 (365)
T ss_pred HHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHHH---HHhCC------CCCEE-EECCCChHHHHHHHHhCC
Confidence 999999988888753 55554332 11 112222 22211 12365 467889999999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
+++.+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...++++ |.|+++++++|.++|+.+ +.+.++
T Consensus 277 ~vv~~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~ 341 (365)
T TIGR00236 277 LILTDS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKM 341 (365)
T ss_pred EEEECC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHh
Confidence 999888 55689999994 788886 455555544 2345666 589999999999999854 344433
No 125
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.22 E-value=8.1e-09 Score=122.66 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=123.6
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHH--hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~--~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
+.++|.+|.|+...||.+.++.+++++++ .+|+ ..+.+|+.|.+...+.. -+++.+.+.+++.+ -.|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 45688999999999999999999999985 5555 24778877765433322 23455556555442 0021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC----
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~-~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP---- 511 (856)
.|.|+.+ .+..--..+|.+||+++. ||. +|..|+.-+=||.- |.|-.|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 4676554 466666778999999999 888 99999999999985 778888877776654 568999985
Q ss_pred --------CCHHHHHHHHHHHH-----cCC----HHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Q 003029 512 --------WNITEVANAIARAL-----NMS----PEEREKRHWHNFTH-VTTHTAQEWAETFVSE 558 (856)
Q Consensus 512 --------~d~~~lA~ai~~aL-----~~~----~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~ 558 (856)
.|.+++-++|.+++ +.+ +....+++++.... ...++|.+=++.+.+.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 221 11223333333222 2246766666666543
No 126
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.22 E-value=2.2e-09 Score=122.33 Aligned_cols=266 Identities=11% Similarity=0.062 Sum_probs=155.8
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
+++..+ +|+|+++.. ...+..+.+....++|+. ++++-+..... | + --.+|.+...+....+.+..
T Consensus 99 ~l~~~k-PDvVi~~~p-~~~~~~l~~~~~~~iP~~-~v~td~~~~~~-----w---~---~~~~d~~~v~s~~~~~~l~~ 164 (391)
T PRK13608 99 LLIKEK-PDLILLTFP-TPVMSVLTEQFNINIPVA-TVMTDYRLHKN-----W---I---TPYSTRYYVATKETKQDFID 164 (391)
T ss_pred HHHHhC-cCEEEECCc-HHHHHHHHHhcCCCCCEE-EEeCCCCcccc-----c---c---cCCCCEEEECCHHHHHHHHH
Confidence 333344 589888522 223333333334467774 34444311100 1 1 12578877777654444332
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCc-eEEEeecccccCChHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~V~Rld~~KGi~~ 380 (856)
.|. ...+|.++++.|+.. |.+.. + ...+++++ ++++ +++++||+...||+..
T Consensus 165 -----~gi-----------~~~ki~v~GiPv~~~-f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~ 220 (391)
T PRK13608 165 -----VGI-----------DPSTVKVTGIPIDNK-FETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDT 220 (391)
T ss_pred -----cCC-----------CHHHEEEECeecChH-hcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHH
Confidence 122 234566666667643 43211 1 12334444 2444 5667999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+++++ ++..|++ .++++++. .+ ++.+++.+.. +.. ..|+ +.|++ +++..+|++|
T Consensus 221 li~~~---~~~~~~~----~~vvv~G~----~~---~l~~~l~~~~---~~~------~~v~-~~G~~--~~~~~~~~~a 274 (391)
T PRK13608 221 MITDI---LAKSANA----QVVMICGK----SK---ELKRSLTAKF---KSN------ENVL-ILGYT--KHMNEWMASS 274 (391)
T ss_pred HHHHH---HhcCCCc----eEEEEcCC----CH---HHHHHHHHHh---ccC------CCeE-EEecc--chHHHHHHhh
Confidence 99985 3344543 46556532 12 1223333221 110 1354 46665 5799999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-----hccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-----SLGAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-----~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
|+++.. +.|+++.|||||+ .|+|++...+..+ .+.+.|.-+.+.|+++++++|.++++++ +.+.++
T Consensus 275 Dl~I~k----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m 345 (391)
T PRK13608 275 QLMITK----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNM 345 (391)
T ss_pred hEEEeC----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHH
Confidence 999863 4589999999994 8899885432222 1123333334669999999999999864 577777
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 536 HWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
.+++++....+++..-++.+++.+....
T Consensus 346 ~~~~~~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 346 ISTMEQDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHhhhhh
Confidence 7888888888888888888877766543
No 127
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.20 E-value=1.9e-09 Score=120.92 Aligned_cols=244 Identities=15% Similarity=0.064 Sum_probs=139.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.+....++..+..+..++|+.++.|.-. +.+ +..|+........-.+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~------ 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAIDKLSDLHFAPTEEARRNLLQ------ 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHHHHhhhccCCCHHHHHHHHH------
Confidence 459999998766555555544445788876554211 000 01121110000111345544444433333321
Q ss_pred CcccCCCceeeCCeeEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHh--c-CCceEEEeecccc---cCChHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQKLL 383 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIl~V~Rld~---~KGi~~~L~ 383 (856)
.+....+|.++++++ |...+.+..... ...++.+ . ++.+++.++|+.. .||+..+++
T Consensus 159 ----------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~ 222 (363)
T cd03786 159 ----------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILE 222 (363)
T ss_pred ----------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHH
Confidence 122345788888885 654433221100 1112222 2 3457778999875 799999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|++.+.+. + +.++..+. .+....+++. +.+.+.. ...|. +.+....+++..+|+.||++
T Consensus 223 al~~l~~~--~----~~vi~~~~-----~~~~~~l~~~----~~~~~~~-----~~~v~-~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 223 ALAELAEE--D----VPVVFPNH-----PRTRPRIREA----GLEFLGH-----HPNVL-LISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred HHHHHHhc--C----CEEEEECC-----CChHHHHHHH----HHhhccC-----CCCEE-EECCcCHHHHHHHHHcCcEE
Confidence 99987432 2 33443322 2222333333 3332210 01355 46667789999999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCC-CHHHHHHHHHHHHcCCH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 529 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~-d~~~lA~ai~~aL~~~~ 529 (856)
|.+|- | +..|||+|+ .|+|++...+....+..+|+.+.+. |+++++++|.++++++.
T Consensus 282 v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 282 LTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 99994 4 479999994 8888887655444443556555443 79999999999998754
No 128
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.09 E-value=1.6e-08 Score=118.57 Aligned_cols=261 Identities=12% Similarity=0.079 Sum_probs=166.9
Q ss_pred cCCCCEEE--EeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHH
Q 003029 229 YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (856)
Q Consensus 229 ~~~~DvIw--vHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (856)
..++|++. ++.-|... +....|..++.+..|+ -+. ........+..+..+|.|...|..-.+......
T Consensus 222 ~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-----~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~~ 291 (519)
T TIGR03713 222 VKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-----RHHTYLDLYESLSRADLIIVDREDIERLLEENY 291 (519)
T ss_pred CCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-----cccchhhhhhChhhcCeEEEcCHHHHHHHHHHh
Confidence 56788888 67777665 3333443444446665 111 001124566677788877776754333332211
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~ 386 (856)
.. .. ...+|..+|++.- . .... ..++..++.|.+++||| +.|-+..+|+|+.
T Consensus 292 ~~------------~~-~~~~v~~Ip~~~~-~-~~~~------------~s~r~~~~~I~v~idrL-~ek~~~~~I~av~ 343 (519)
T TIGR03713 292 RE------------NY-VEFDISRITPFDT-R-LRLG------------QSQQLYETEIGFWIDGL-SDEELQQILQQLL 343 (519)
T ss_pred hh------------cc-cCCcceeeCccce-E-EecC------------hhhcccceEEEEEcCCC-ChHHHHHHHHHHH
Confidence 10 00 1234556776544 1 1110 01223355566666699 9999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC----------------------cccEEEe
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT----------------------AVPIHHL 444 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~----------------------~~pV~~~ 444 (856)
++.+++|+.. |.+.|... .. ++.+.+++++.++|..++... -...+.|
T Consensus 344 ~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f 413 (519)
T TIGR03713 344 QYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAF 413 (519)
T ss_pred HHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEE
Confidence 9999999854 66565432 11 234566666666655532100 0024446
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHH
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~ 522 (856)
.|..+..++.+.|..|.++|.+|..|||+ ..+||++. |.|.| .-|.++.+ |.+|++| .|..++++||.
T Consensus 414 ~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~----GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~ 483 (519)
T TIGR03713 414 TTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA----GIPQI---NKVETDYVEHNKNGYII--DDISELLKALD 483 (519)
T ss_pred EecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc----CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHH
Confidence 88888889999999999999999999999 99999998 35666 55667777 7899999 79999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHhcCH
Q 003029 523 RALNMSPEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 523 ~aL~~~~~er~~r~~~~~~~v~~~~~ 548 (856)
.+|+.+. ...+......+.+.+++.
T Consensus 484 ~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 484 YYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred HHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 9998654 455555555665555544
No 129
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.09 E-value=1.8e-08 Score=112.45 Aligned_cols=240 Identities=14% Similarity=0.031 Sum_probs=145.0
Q ss_pred HHHhcCCCCEEEEeCccchh--HHH-HHHh-cCCCCeEEEEEecCCCchhhhhcCc-ccHHHHHHhhcCCEEEEeCHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~fr~lp-~~~~il~~ll~aDlIgf~t~~~~ 299 (856)
+....++||+|++|..-+.. ++. +++. +..++++++++|--+|-. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45567899999999854432 222 2222 112799999999876532 11111 12223344557899999988765
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChH
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~ 379 (856)
+.+.+ .|. ...++.++|+..++..... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~-----------~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGL-----------TTDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCC-----------CcCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 122 1223444444333211100 01123456899999999443211
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 380 ~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
+..|+ +.|+++|.+ ++.. .. ...|.| .|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~g-----~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGPN-----PEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECCC-----cccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 12344 457777632 2110 00 113664 899999999999998
Q ss_pred ccEEEECCC-----------CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 460 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 460 ADv~v~~S~-----------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
|+++++.- .-.++--..||||| |.|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHC----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76666432 12345558899999 4999999999999888 45799997 678999999874
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 003029 527 MSPEEREKRHWHNFTHVTT 545 (856)
Q Consensus 527 ~~~~er~~r~~~~~~~v~~ 545 (856)
+++++.++.++.++....
T Consensus 298 -~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKL 315 (333)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 356777766666665543
No 130
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.07 E-value=6.2e-10 Score=106.61 Aligned_cols=130 Identities=25% Similarity=0.318 Sum_probs=89.6
Q ss_pred CceEEEeecccccCChHHHHH-HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 363 ~~iIl~V~Rld~~KGi~~~L~-Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|.++|.. ++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~-----~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNG-----PD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECES-----S-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCC-----HH------HHHHh-cC----------CCE
Confidence 357899999999999999999 99999999987 457777642 22 12222 01 136
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
.+ .+.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |....+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 6777 689999999999999985 789999999999994 89999888 555555 2456677 89999999
Q ss_pred HHHHHHHcC
Q 003029 519 NAIARALNM 527 (856)
Q Consensus 519 ~ai~~aL~~ 527 (856)
++|.+++++
T Consensus 127 ~~i~~l~~d 135 (135)
T PF13692_consen 127 EAIERLLND 135 (135)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHhcC
Confidence 999999863
No 131
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.05 E-value=2.5e-08 Score=112.81 Aligned_cols=150 Identities=19% Similarity=0.184 Sum_probs=97.9
Q ss_pred HHHHhc---CCceE-EEee-cccccCC-hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003029 356 LQETFA---GRKVM-LGVD-RLDMIKG-IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (856)
Q Consensus 356 lr~~~~---~~~iI-l~V~-Rld~~KG-i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~I 429 (856)
+++.++ ++++| +..| |....|+ ++.+++|++.+.+++|++ .+++++. +.+.. +++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~~----~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKRR----EQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----ChhhH----HHHHHHHhhc
Confidence 444453 45543 4334 7766554 788999999998888764 3665643 12222 3333333321
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe----------------
Q 003029 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 493 (856)
Q Consensus 430 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS---------------- 493 (856)
. | . .+.++. .++..+|+.||+++++| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 1 1 244433 47899999999999998 78889999994 888887
Q ss_pred -CCCCchhhccC----CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 494 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 494 -e~aG~~~~lg~----~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
.+.|.++.+.. .+++.++.|+++++++|.++|++++ .+.++.+++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHHH
Confidence 45555666622 2467788899999999999998653 555555554
No 132
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.02 E-value=1.4e-08 Score=100.50 Aligned_cols=220 Identities=16% Similarity=0.216 Sum_probs=150.2
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--C-
Q 003029 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 661 (856)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~- 661 (856)
++++-..-|+.||.||||++. ..+++|++.+.|++|.+ ..++-++-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 344455669999999999987 56789999999999874 8999999999888888888552 3
Q ss_pred -ceEEeeCceEEEecCCeeeecccccCChHHH--HHHHHH----HHHHHhc----CCCcEEeeecceEEEEe--ecCCh-
Q 003029 662 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWV--DSLKHV----FEYFTER----TPRSHFEQRETSLVWNY--KYADV- 727 (856)
Q Consensus 662 -lgliaenG~~i~~~~~~w~~~~~~~~~~~w~--~~v~~i----~~~~~~r----t~gs~ie~k~~si~~~y--~~~d~- 727 (856)
.+.-+|||..-...++... ...-..|. +.++++ +.+..+- ..|.+||-++..+.+.- |+|..
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4788999998764433211 00111222 223333 3333321 34889998777665543 44432
Q ss_pred ---hhhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 728 ---EFGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 728 ---e~~~~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
+|... ....+.+.| ++-+....+..-- |.-+++|-|.|++|-..+++|-++ | .+.+-.|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 22211 112344555 3333455666544 456899999999999999887654 3 689999999
Q ss_pred CCcccccccccccccCcceEEeCCCCc-cccCCHHHHHHHHHHHHH
Q 003029 799 FLGKNCNLPLQFLMQTISTVRLDSSFL-HYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 799 ~~~nDe~M~f~~~~~~~~~v~V~~~~~-~~l~~~~~~~~~l~~~~~ 843 (856)
..| -++....|.+++.+. |++.+|+|..+.++++++
T Consensus 215 -----kT~----~GGNDyEIf~dprtiGhsV~~PdDT~~~~~~if~ 251 (252)
T KOG3189|consen 215 -----KTM----PGGNDYEIFADPRTIGHSVTSPDDTVRICEEIFK 251 (252)
T ss_pred -----ccC----CCCCcceeeeCCccccccccCchHHHHHHHHHhc
Confidence 344 456678888888888 999999999999998874
No 133
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.92 E-value=5.7e-07 Score=103.95 Aligned_cols=305 Identities=17% Similarity=0.193 Sum_probs=153.3
Q ss_pred EEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC-------chhhhhcCcc---cH-----------HHHHH-hhcCCEE
Q 003029 234 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---RS-----------DLLRA-VLAADLV 291 (856)
Q Consensus 234 vIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP-------~~e~fr~lp~---~~-----------~il~~-ll~aDlI 291 (856)
+.+.|.|..-+-..++|.+.|++.-.|+.|---+ ..++|..|+. .+ -+-+. -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3377888877777789999999999999996432 1123333331 00 11111 2233443
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhc----CCchHHHHHHH-HHHh-c----
Q 003029 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQVHIKEL-QETF-A---- 361 (856)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~----~~~~~~~~~~l-r~~~-~---- 361 (856)
-.-+.--+. .|..+|+ |. .=.|.|||+|.+.|....+ ....++++.++ +..+ +
T Consensus 226 TTVSeITa~----Ea~~LL~------------r~-pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK------------RK-PDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHHS------------S---SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHhC------------CC-CCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 322221111 1222332 21 1136799999887754311 00122333333 2222 1
Q ss_pred --CCceEEE-eeccc-ccCChHHHHHHHHHHHH---h-CcCccCceEEEEEEcCCCCCh---H------HHHHHHHHHHH
Q 003029 362 --GRKVMLG-VDRLD-MIKGIPQKLLAFEKFLE---E-NSDWRGKVVLLQIAVPTRTDV---P------EYQRLTSQVHE 424 (856)
Q Consensus 362 --~~~iIl~-V~Rld-~~KGi~~~L~Af~~~l~---~-~P~~~~~v~Lv~v~~p~r~~~---~------~~~~l~~~l~~ 424 (856)
++.++++ .||.+ ..||++..|+|+.+|-. . ..+ ..|+.+ +-.|+.... + -+.+|++-+.+
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~--~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~ 365 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSD--KTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDE 365 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S---EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCC--CeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHH
Confidence 3455444 89999 57999999999998743 2 222 124433 334554321 1 01223322222
Q ss_pred HHHHhhcc--------------------------------------------------------------c-CCCCcccE
Q 003029 425 IVGRINGR--------------------------------------------------------------F-GTLTAVPI 441 (856)
Q Consensus 425 lv~~IN~~--------------------------------------------------------------~-g~~~~~pV 441 (856)
+..+|..+ + ...+...|
T Consensus 366 i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKV 445 (633)
T PF05693_consen 366 IQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKV 445 (633)
T ss_dssp HHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEE
T ss_pred HHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEE
Confidence 22222110 0 00122345
Q ss_pred EEeCCCCCH------HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-------cCCeEE
Q 003029 442 HHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAIL 508 (856)
Q Consensus 442 ~~~~g~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-------g~~g~l 508 (856)
+|...+++. -++..+.+.+|+.|+||+||++|.+++|+.|+ +.|-|.|+.+|....+ ...|+.
T Consensus 446 IF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~----gVPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 446 IFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF----GVPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp EE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT----T--EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred EEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhc----CCceeeccchhHHHHHHHhhccCcCCcEE
Confidence 555444433 46788999999999999999999999999999 4899999999988655 134665
Q ss_pred E-CC--CC----HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 509 V-NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 509 V-nP--~d----~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
| += .+ ++++|+.|.....++..+|.....+..+.....+|..-...+.+....+
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5 22 23 3566777777788888777776666655556666666555555544433
No 134
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.91 E-value=6.7e-07 Score=108.46 Aligned_cols=182 Identities=16% Similarity=0.113 Sum_probs=120.5
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHH--hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~--~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
.+|.++.|+...||...++..++++.+ .+|+ ..+.+|..|.+...+.. -+++.+.+.+++.. -+|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC----CcE
Confidence 378899999999999999999999865 2444 24778877755433322 13445555555431 0221 147
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC------
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------ 511 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP------ 511 (856)
+|+.+ .+-.--..++..|||++.||. .|.-|+.-+=||.- |+|-+|..-|.-.+. |.+|..+.+
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 76554 466666778999999999999 99999999998885 889999888877766 678999988
Q ss_pred ------CCHHHHHHHHHHHHc----CC-----HHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHH
Q 003029 512 ------WNITEVANAIARALN----MS-----PEEREKRHWHNFT-HVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 512 ------~d~~~lA~ai~~aL~----~~-----~~er~~r~~~~~~-~v~~~~~~~W~~~fl~~l~ 560 (856)
.|.+++.+.|.+.+- .. +.+..+++++... ..-.+++.+=++.|++.+.
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455555566644332 10 1233344433322 2245666666666666554
No 135
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.81 E-value=2.1e-08 Score=102.47 Aligned_cols=193 Identities=16% Similarity=0.238 Sum_probs=118.7
Q ss_pred HHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc-c-c---CceEEeeCceEEEecC-CeeeecccccCChHHHHH-HHHHH
Q 003029 627 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-E-Y---NLWLAAENGMFLRCTT-GKWMTTMPEHLNMEWVDS-LKHVF 699 (856)
Q Consensus 627 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-l---~lgliaenG~~i~~~~-~~w~~~~~~~~~~~w~~~-v~~i~ 699 (856)
+.+.|++|.+ +..|.|+||-.+.-+++.+. . + -.++-++||..++..+ ..|...+.+.+..+-... +..++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899985 79999999999999998884 3 2 2589999999877544 346443322222222222 22222
Q ss_pred HHHHh----cCCCcEEeeecceEEEEe--ecCChh----hhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 003029 700 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 763 (856)
Q Consensus 700 ~~~~~----rt~gs~ie~k~~si~~~y--~~~d~e----~~~~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~ 763 (856)
++..+ ...|.+||.+...|.+.- ++|..+ |..+ ..+.+.+.| ++.+....+++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 33221 135899999999998864 344321 2111 012355555 4334556788765 56899999
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---CcccccccccccccCcceEEeCCCCc-cccCCHHHHHHHHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKNCNLPLQFLMQTISTVRLDSSFL-HYLRMKMCMRFLSQ 839 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~nDe~M~f~~~~~~~~~v~V~~~~~-~~l~~~~~~~~~l~ 839 (856)
|+|++|..++++|.+. ..+.+++|||. +.||-+. |.. +... |.+.+|.|..+.|+
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei-~~~-----------~rt~g~~V~~p~DT~~~l~ 216 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEI-FED-----------PRTIGHTVTSPEDTIKQLK 216 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHH-HHS-----------TTSEEEE-SSHHHHHHHHH
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCcee-eec-----------CCccEEEeCCHHHHHHHHH
Confidence 9999999999987543 26899999991 2456555 432 2222 56689999999999
Q ss_pred HHHH
Q 003029 840 NYLM 843 (856)
Q Consensus 840 ~~~~ 843 (856)
++++
T Consensus 217 ~l~~ 220 (220)
T PF03332_consen 217 ELFF 220 (220)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 9874
No 136
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.59 E-value=7.9e-08 Score=90.89 Aligned_cols=63 Identities=19% Similarity=0.291 Sum_probs=48.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+++||+||||++...... ......+.+.+.+.|++|++ .|+.++|+||+....+..++...++
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcCC
Confidence 489999999998742100 00123678899999999997 5899999999999999998877643
No 137
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.55 E-value=1.3e-05 Score=91.39 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=84.6
Q ss_pred CCceEEE--eecccc-cCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003029 362 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (856)
Q Consensus 362 ~~~iIl~--V~Rld~-~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (856)
++++|+. .+|..+ .|+++.+++|++.+.+.+|+++ +++.+.+. ... ..++++....+ . +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhC----C-C-
Confidence 5565543 359988 7999999999999988888754 54433221 111 12222222221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-----------------CCCchhh
Q 003029 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 501 (856)
Q Consensus 439 ~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-----------------~aG~~~~ 501 (856)
..|.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544433 3457999999999999 77888999995 7877772 2222222
Q ss_pred c-cCCeE--EE-CCCCHHHHHHHHHHHHcCC
Q 003029 502 L-GAGAI--LV-NPWNITEVANAIARALNMS 528 (856)
Q Consensus 502 l-g~~g~--lV-nP~d~~~lA~ai~~aL~~~ 528 (856)
+ +.+++ ++ .-.+++.+++++.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22211 11 3357889999999999876
No 138
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.53 E-value=4.8e-07 Score=81.13 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=74.1
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
|++.|+..+|+++..+|+|||| +|+|.+...+....+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888999999999999994 677777777888877 55688887 9999999999999965 5888889999
Q ss_pred HHHHH-hcCHHHHHHHHH
Q 003029 540 FTHVT-THTAQEWAETFV 556 (856)
Q Consensus 540 ~~~v~-~~~~~~W~~~fl 556 (856)
+++|. .|++.+-++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 99986 888888777776
No 139
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.38 E-value=5.3e-05 Score=87.28 Aligned_cols=136 Identities=11% Similarity=0.125 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
...|+|++.+.+..|++. |=+ |.++ + +...+.++ .+ | ..++.+.+. ....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~~-~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPNI-TTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECCc-ChHHHHHHHH
Confidence 899999999999999965 543 5443 1 11334444 22 2 235654554 4567999999
Q ss_pred HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-CCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
.||++|.+|..||+++++.||+..+ .|+|.=+. .|-.+.+ ..|.+|++.|+++++++|.++|+++. ...++..
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G----~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~-~~~~~~~ 420 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYN----LLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN-QFRELLE 420 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcC----CcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH-HHHHHHH
Confidence 9999999999999999999999972 45554444 4555555 45899999999999999999999774 3333333
Q ss_pred HHHHHHH
Q 003029 538 HNFTHVT 544 (856)
Q Consensus 538 ~~~~~v~ 544 (856)
.-+++..
T Consensus 421 ~q~~~a~ 427 (438)
T TIGR02919 421 QQREHAN 427 (438)
T ss_pred HHHHHhc
Confidence 3344443
No 140
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.34 E-value=1.7e-06 Score=85.64 Aligned_cols=66 Identities=18% Similarity=0.111 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-------CccccCCHHH---HHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-------FLHYLRMKMC---MRFL 837 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-------~~~~l~~~~~---~~~~ 837 (856)
+|..++.+++++++ .+++.++++|| +.||.+| ++.+ ++++.|.+. +.|.+..+.. +.++
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~-~~~a---g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~ 144 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPV-MEKV---GLSVAVADAHPLLIPRADYVTRIAGGRGAVREV 144 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHH
Confidence 48899999999998 56899999999 9999999 6655 567888654 3377776654 8888
Q ss_pred HHHHHHH
Q 003029 838 SQNYLMM 844 (856)
Q Consensus 838 l~~~~~~ 844 (856)
++.++..
T Consensus 145 ~~~~~~~ 151 (154)
T TIGR01670 145 CELLLLA 151 (154)
T ss_pred HHHHHHh
Confidence 8888754
No 141
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.30 E-value=1e-06 Score=87.51 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=56.1
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH---HHhcc-------cC-
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 661 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-------l~- 661 (856)
++++|+||||++.... ++..+-+ ....+++.+.+++++|.+ +|+.|+++|||+..... +|+.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999987310 0000000 014678999999999986 79999999999998874 67766 22
Q ss_pred ceEEeeCceEEE
Q 003029 662 LWLAAENGMFLR 673 (856)
Q Consensus 662 lgliaenG~~i~ 673 (856)
.++++.||+++.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 378999999885
No 142
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.25 E-value=2.9e-06 Score=86.47 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
|..++++++++++ .+++++++||| +.||.+| ++.+ ++++.|++
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~-a~~a---G~~~~v~~ 139 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPV-MEKV---GLSVAVAD 139 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEecCC
Confidence 6688999999998 56899999999 9999999 7665 45666654
No 143
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.23 E-value=0.00098 Score=74.71 Aligned_cols=309 Identities=18% Similarity=0.210 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEeCccc----hhHH--HHHHhcCCCCeEEEEEecCCC---------chhhhhcCccc-
Q 003029 215 IKANQMFADVVNKHYKDGDVVWCHDYHL----MFLP--KCLKEYNSDMKVGWFLHTPFP---------SSEIHRTLPSR- 278 (856)
Q Consensus 215 ~~vN~~fa~~i~~~~~~~DvIwvHDyhl----~llp--~~lr~~~~~~~i~~flH~PfP---------~~e~fr~lp~~- 278 (856)
++.+.+|+-.-.....++-.||+|--.. ...| .-++++.|+.+|..+.-||-- +.-....+|..
T Consensus 32 ~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~ 111 (419)
T COG1519 32 KRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDL 111 (419)
T ss_pred HHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCc
Confidence 3456777621122223567999997552 2333 448899999999988766632 11122334432
Q ss_pred HHHHHHh---hcCCEEEEeCHHHHHHHHHHHHHHhCccc-------CC--------------------Cce---------
Q 003029 279 SDLLRAV---LAADLVGFHTYDYARHFVSACTRILGFEG-------TP--------------------EGV--------- 319 (856)
Q Consensus 279 ~~il~~l---l~aDlIgf~t~~~~~~Fl~~~~~~lg~~~-------~~--------------------~~v--------- 319 (856)
...++.. ...|+..|...+.=.|++..|.+. |... +. +.+
T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~ 190 (419)
T COG1519 112 PIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQ 190 (419)
T ss_pred hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHH
Confidence 1222222 245666666666666666665432 1110 00 000
Q ss_pred ---eeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCc
Q 003029 320 ---EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW 395 (856)
Q Consensus 320 ---~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~ 395 (856)
..+.+. |.+.-| |- ... ...+........+|.++++ +++++..+. ...--...+.|+..+++++|+.
T Consensus 191 Rf~~LGa~~--v~v~GN-lK--fd~--~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~ 261 (419)
T COG1519 191 RFRSLGAKP--VVVTGN-LK--FDI--EPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNL 261 (419)
T ss_pred HHHhcCCcc--eEEecc-ee--ecC--CCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCc
Confidence 011111 222211 10 000 0123344556678888877 899999888 3333444789999999999985
Q ss_pred cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC-------cccEEEeCCCCCHHHHHHHHHHccEEEECC-
Q 003029 396 RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------AVPIHHLDRSLDFPALCALYAVTDVALVTS- 467 (856)
Q Consensus 396 ~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~-------~~pV~~~~g~v~~~el~aly~~ADv~v~~S- 467 (856)
. ||+| | ..||. -..+++++.+.|-+++.-+ -++|.. . -+.-|+..+|+.|||+.+--
T Consensus 262 l----lIlV--P---RHpER---f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l-~--DtmGEL~l~y~~adiAFVGGS 326 (419)
T COG1519 262 L----LILV--P---RHPER---FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLL-G--DTMGELGLLYGIADIAFVGGS 326 (419)
T ss_pred e----EEEe--c---CChhh---HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEE-E--ecHhHHHHHHhhccEEEECCc
Confidence 3 4333 4 23442 3567777777766654311 123432 1 25679999999999988743
Q ss_pred C--CcCCChhHHHHHhhcCCCCceEEEe----CCCCchhhc-c-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 468 L--RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 468 ~--~EG~~Lv~lEama~~~~~~g~lVlS----e~aG~~~~l-g-~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
+ .-|.| ++|+.+|+ .|+|.. .|.-+++.+ . .+|+.|+ |.+.++.++..++++ +++|.++.++.
T Consensus 327 lv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~ 397 (419)
T COG1519 327 LVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAG 397 (419)
T ss_pred ccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHH
Confidence 3 45666 58999993 677754 444455544 2 3466665 477888888887776 67888888888
Q ss_pred HHHHHhcCHHHHHHHHHHHH
Q 003029 540 FTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 540 ~~~v~~~~~~~W~~~fl~~l 559 (856)
...+..+. .-.++.+..|
T Consensus 398 ~~~v~~~~--gal~r~l~~l 415 (419)
T COG1519 398 LEFLAQNR--GALARTLEAL 415 (419)
T ss_pred HHHHHHhh--HHHHHHHHHh
Confidence 88887662 3334444444
No 144
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.00 E-value=1.1e-05 Score=76.74 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=42.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (856)
|+|++|+||||+.....+- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987531110 124578899999999975 69999999999987653
No 145
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.87 E-value=2.6e-05 Score=83.74 Aligned_cols=72 Identities=15% Similarity=0.269 Sum_probs=58.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----gl 664 (856)
..++|+||+||||+++.. ..++ +|.+.++|.+|.+ .|+.++|+|++++..+...++.+++ ..
T Consensus 125 ~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdv 191 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDI 191 (301)
T ss_pred cceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCE
Confidence 468999999999999832 1223 4899999999997 7999999999999999988888864 36
Q ss_pred EeeCceEEEe
Q 003029 665 AAENGMFLRC 674 (856)
Q Consensus 665 iaenG~~i~~ 674 (856)
|..+|...+.
T Consensus 192 IIs~Gdv~~~ 201 (301)
T TIGR01684 192 IISGGHKAEE 201 (301)
T ss_pred EEECCccccC
Confidence 7778887663
No 146
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.70 E-value=8.5e-06 Score=90.20 Aligned_cols=45 Identities=11% Similarity=0.152 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
+-.|+.+++++++++| ++++++++||| +.||++| ++.+ +++|.+.
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m-~~~A---GlgiA~n 290 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPM-IKAA---GLGIAYH 290 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHH-HHHC---CCeEEeC
Confidence 3589999999999999 67899999999 9999999 7766 5677774
No 147
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.69 E-value=0.00021 Score=74.62 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=42.4
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 762 V~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..-.+-+|..+++.+++.+| ++++.++|+|| +.||.+| |+.+ +..|.|.+.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpm-l~~a---g~~ia~n~~ 188 (212)
T COG0560 138 PICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPM-LEAA---GLPIAVNPK 188 (212)
T ss_pred eecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHH-HHhC---CCCeEeCcC
Confidence 33445689999999999999 66889999999 9999999 8877 567777665
No 148
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.68 E-value=0.00024 Score=71.40 Aligned_cols=141 Identities=11% Similarity=0.090 Sum_probs=92.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG 669 (856)
..|+++||+||||++..-. -++.-+.....+.+-...|+.|.+ .|..++|+|+.+...+...++.+++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~----~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~lgi~------ 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIV----INDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEELKIK------ 74 (169)
T ss_pred cCeEEEEeCceeeECCeEE----EcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHCCCc------
Confidence 3799999999999986210 011111233455566777888875 68889999988777766666554321
Q ss_pred eEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCC
Q 003029 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (856)
Q Consensus 670 ~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~ 749 (856)
.| +
T Consensus 75 --------~~---f------------------------------------------------------------------ 77 (169)
T TIGR02726 75 --------RF---H------------------------------------------------------------------ 77 (169)
T ss_pred --------EE---E------------------------------------------------------------------
Confidence 00 0
Q ss_pred CeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC-----
Q 003029 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF----- 824 (856)
Q Consensus 750 ~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~----- 824 (856)
.+ + -.|-..+..++++++ +.++++++||| +.||++| ++. .++++.+.+..
T Consensus 78 -----~~-----~----kpkp~~~~~~~~~l~------~~~~ev~~iGD-~~nDi~~-~~~---ag~~~am~nA~~~lk~ 132 (169)
T TIGR02726 78 -----EG-----I----KKKTEPYAQMLEEMN------ISDAEVCYVGD-DLVDLSM-MKR---VGLAVAVGDAVADVKE 132 (169)
T ss_pred -----ec-----C----CCCHHHHHHHHHHcC------cCHHHEEEECC-CHHHHHH-HHH---CCCeEECcCchHHHHH
Confidence 00 0 145567888888888 56889999999 9999999 665 47888888752
Q ss_pred -c-cccC---CHHHHHHHHHHHHH
Q 003029 825 -L-HYLR---MKMCMRFLSQNYLM 843 (856)
Q Consensus 825 -~-~~l~---~~~~~~~~l~~~~~ 843 (856)
+ |-+. ..-.++++.+.+|+
T Consensus 133 ~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 133 AAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred hCCEEcCCCCCCCHHHHHHHHHHH
Confidence 2 3332 22357788877775
No 149
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.51 E-value=0.00019 Score=77.30 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=55.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----gl 664 (856)
..++|+||+||||+++.. ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...++.+++ -.
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 358999999999998832 1112 5899999999996 7999999998888888888888754 25
Q ss_pred EeeCceEEE
Q 003029 665 AAENGMFLR 673 (856)
Q Consensus 665 iaenG~~i~ 673 (856)
|..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 666776554
No 150
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.39 E-value=0.0018 Score=67.58 Aligned_cols=45 Identities=9% Similarity=0.149 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
.|+..+++++++++ +++++++++|| +.+|.++ .+.+ ++.|.++.+
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~a-a~~a---g~~i~~~~~ 196 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSM-IKAA---GLGIAFNAK 196 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHH-HHhC---CCeEEeCCC
Confidence 48999999999988 56889999999 9999888 5544 666777654
No 151
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.31 E-value=0.0023 Score=65.39 Aligned_cols=46 Identities=15% Similarity=0.309 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
+|+.++++++++++ .+++.++++|| +.+|.+| .+.+ +..+.+.+..
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~-a~~a---g~~~a~~~~~ 192 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPM-FEVA---DISISLGDEG 192 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHH-HHhc---CCeEEECCCc
Confidence 69999999999988 56889999999 9999999 6654 6777776543
No 152
>PLN02954 phosphoserine phosphatase
Probab=97.14 E-value=0.0042 Score=64.97 Aligned_cols=62 Identities=8% Similarity=-0.104 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC----C-----CccccCCHHHHH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS----S-----FLHYLRMKMCMR 835 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~----~-----~~~~l~~~~~~~ 835 (856)
.+-.|..++.+++++++ .+.+++||| +.+|..| -+... ..+.+..+. + +.|-+.++.++.
T Consensus 152 ~~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~a-a~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 220 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEA-RKPGG-ADLFIGYGGVQVREAVAAKADWFVTDFQDLI 220 (224)
T ss_pred CCccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHh-hhcCC-CCEEEecCCCccCHHHHhcCCEEECCHHHHH
Confidence 34568999999998876 357999999 9999988 55432 222332331 1 126677777765
Q ss_pred HH
Q 003029 836 FL 837 (856)
Q Consensus 836 ~~ 837 (856)
.+
T Consensus 221 ~~ 222 (224)
T PLN02954 221 EV 222 (224)
T ss_pred Hh
Confidence 54
No 153
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.11 E-value=0.00053 Score=73.45 Aligned_cols=66 Identities=5% Similarity=0.145 Sum_probs=52.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc-----
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL----- 662 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l----- 662 (856)
.|+|+||+||||++.. ..+ +.+.++|++|.+ .|+.|+++|| |+...+...+..+++
T Consensus 1 ~~~~~~D~DGtl~~~~--------------~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~ 64 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGK--------------ERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLE 64 (249)
T ss_pred CCEEEEeCCCceEcCC--------------eeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh
Confidence 3789999999999862 223 478999999996 7999999995 999999888888743
Q ss_pred eEEeeCceEE
Q 003029 663 WLAAENGMFL 672 (856)
Q Consensus 663 gliaenG~~i 672 (856)
.+++.+|+..
T Consensus 65 ~iit~~~~~~ 74 (249)
T TIGR01457 65 TVFTASMATA 74 (249)
T ss_pred hEeeHHHHHH
Confidence 3777777643
No 154
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.06 E-value=0.00085 Score=64.22 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=48.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC--------HhhHHHHhcccCc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 662 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~l~l 662 (856)
|+++||+||||++.... .+ +.....+.+.+.++|+.|.+ .|+.++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 68999999999953110 00 11245678899999999985 699999999998 6777777777654
No 155
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.83 E-value=0.0009 Score=72.02 Aligned_cols=55 Identities=7% Similarity=0.111 Sum_probs=42.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
|+|+||+||||...... ...+.|.+.++|++|.+ .|..|+++|||+....+....
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~~~ 56 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDLLE 56 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHH
Confidence 78999999999976210 11267799999999986 699999999987776443333
No 156
>PRK10444 UMP phosphatase; Provisional
Probab=96.83 E-value=0.00095 Score=71.45 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=45.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+|+|+||+||||.... .+.|.+.++|+.|.+ .|..++++|+|+......+...+
T Consensus 1 ~~~v~~DlDGtL~~~~---------------~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHDN---------------VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeCC---------------eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 4789999999999762 467889999999996 79999999999998777766665
No 157
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.76 E-value=0.12 Score=56.52 Aligned_cols=165 Identities=15% Similarity=0.200 Sum_probs=112.1
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHh-------CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-------NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~-------~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (856)
...++++--.+.|-..+--+|.|+..+-+. +|. + |.+|+ |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 346788888999999999999999865221 332 3 33344 2456666666666654
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHccEEE--ECCCCcCCCh--hHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEE
Q 003029 435 TLTAVPIHHLDRSLDFPALCALYAVTDVAL--VTSLRDGMNL--VSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 508 (856)
Q Consensus 435 ~~~~~pV~~~~g~v~~~el~aly~~ADv~v--~~S~~EG~~L--v~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~l 508 (856)
.|..|.+.+-.+.-++++.++..||..| -||. -|.-| -+....-| +.|+++-.|.-..|.+ |.||++
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlv 388 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLV 388 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceE
Confidence 4567888888899999999999999765 4554 45544 45566667 3677777887777766 789999
Q ss_pred ECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003029 509 VNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (856)
Q Consensus 509 VnP~d~~~lA~ai~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (856)
++ |.+++|+.|..+.+. +..+-....+..++ ..-.+|.+..-.
T Consensus 389 F~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e----~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 389 FE--DSEELAEQLQMLFKNFPDNADELNQLKKNLRE----EQELRWDESWER 434 (444)
T ss_pred ec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHH----HHhhhHHHHHHH
Confidence 96 899999999999982 23333332223233 334567665543
No 158
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.75 E-value=0.0024 Score=61.20 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=43.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC-CHhhHHHHhcc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 659 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~~ 659 (856)
|+|++|+||||++.....- ....+ .....+.+.+.+.|+.|.+ .|+.++|+|++ +.......++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~-~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPI-IDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcc-hhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998731000 00000 0000357899999999986 69999999999 77666655544
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=96.66 E-value=0.0014 Score=72.47 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=44.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
++++|+||+||||.... .+-+.+.++|++|.+ .|.+|+++|+|+......++..+
T Consensus 27 ~~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHH
Confidence 47899999999999762 245778999999986 69999999999966655555443
No 160
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.54 E-value=0.002 Score=70.19 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=39.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
+++|+||+||||.+.. .+-+.+.++|++|.+ +|..|+++|||+......++.
T Consensus 2 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~~~ 53 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGE---------------RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEYAL 53 (279)
T ss_pred ccEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHH
Confidence 5789999999998752 234559999999986 799999999987554444333
No 161
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.52 E-value=0.0063 Score=64.54 Aligned_cols=84 Identities=10% Similarity=0.041 Sum_probs=54.8
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccc--c-------------------ccccCCChhHHHHHHHhh
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI--R-------------------EMELKLHPDLKQPLNALC 635 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~--~-------------------~~~~~~s~~~~~~L~~L~ 635 (856)
.+++++.++....+.-.|+||+||||+++.+.- ..+.+. + .....+-+-+++.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~-~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGF-WRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHH-hCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHH
Confidence 366777777776555589999999999885410 001010 0 011233334899999998
Q ss_pred cCCCCeEEEEcCC----CHhhHHHHhcccCc
Q 003029 636 HDPKTTIVVLSGS----DRNVLDKNFQEYNL 662 (856)
Q Consensus 636 ~d~g~~V~I~SGR----~~~~l~~~~~~l~l 662 (856)
+ .|.+++|+|+| ....++.+++.+++
T Consensus 128 ~-~G~~i~iVTnr~~~k~~~~a~~ll~~lGi 157 (237)
T TIGR01672 128 R-RGDAIFFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred H-CCCEEEEEeCCCCCcCHHHHHHHHHHhCC
Confidence 6 79999999999 44566666655543
No 162
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.24 E-value=0.012 Score=64.07 Aligned_cols=65 Identities=11% Similarity=0.021 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKMCMRF 836 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~~~~~ 836 (856)
.|..++.+++++++ .+++++++||| +.+|+.+ -+.++- .+|.|... +.|.+.++.++..
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~a-A~~AG~--~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEA-ARQVGL--IAVAVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHH-HHHCCC--eEEEEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 46788999999988 56789999999 9998777 443322 34444221 2389999999999
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
++.+|+
T Consensus 266 ~~~~~~ 271 (273)
T PRK13225 266 AVTQLM 271 (273)
T ss_pred HHHHHh
Confidence 888775
No 163
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.04 E-value=0.0095 Score=59.77 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=38.1
Q ss_pred CCeEEEEecCCccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
+.|+++||+||||+...+. +- -+.++.-..+-+.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~---~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVF---PTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcc---cCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 5689999999999975210 00 00000011134789999999986 6999999997654
No 164
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.02 E-value=0.32 Score=54.51 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=85.6
Q ss_pred CCceEEEee-ccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 362 GRKVMLGVD-RLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 362 ~~~iIl~V~-Rld-~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
.+.+.+--| |-. -.+-++-.++|+..+.+++|+++ ++.-.. .+.|+.++.+... .-.. . .
T Consensus 188 ~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~~~~---~~~~-----~-~ 249 (381)
T COG0763 188 EKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEEALK---WEVA-----G-L 249 (381)
T ss_pred CCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHHHhh---cccc-----C-c
Confidence 344444444 433 34456777889999988999976 432222 1333333332211 1000 0 0
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-----------------chhhc
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-----------------AAQSL 502 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-----------------~~~~l 502 (856)
.++ +...+....+.+||+.+..| |.+.+|++.|+ .|.|++=-.. ....+
T Consensus 250 ~~~-----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi 315 (381)
T COG0763 250 SLI-----LIDGEKRKAFAAADAALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNIL 315 (381)
T ss_pred eEE-----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHh
Confidence 122 24467788899999999998 79999999995 6766653222 22222
Q ss_pred cCCeEEECC-----CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHhc
Q 003029 503 GAGAILVNP-----WNITEVANAIARALNMSP--EEREKRHWHNFTHVTTH 546 (856)
Q Consensus 503 g~~g~lVnP-----~d~~~lA~ai~~aL~~~~--~er~~r~~~~~~~v~~~ 546 (856)
.+-.+|+- ..++.+|+++..++.++. ++..+....+.+.+.+.
T Consensus 316 -~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 316 -AGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred -cCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 11122211 347899999999998762 12233344455555544
No 165
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.01 E-value=0.0097 Score=57.92 Aligned_cols=70 Identities=19% Similarity=0.330 Sum_probs=45.1
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
..++||+++|+||||++-.---+.-+..+ +.-+-.---.|+.|.+ -|++|.|+|||.-..+++..+++++
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~----KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEI----KAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCcee----eeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 35789999999999998520000001111 1111112234566654 5999999999999999999988765
No 166
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.00 E-value=0.023 Score=55.96 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=56.5
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEE
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgli 665 (856)
++...|-|++|+|.||++.. ....+|++++-+.++.+ .|+.|+|+|.-...-+..+...+++.+|
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd-------------~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~fi 88 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWD-------------NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPFI 88 (175)
T ss_pred HHcCCcEEEEeccCceeccc-------------CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCcee
Confidence 44678999999999999984 45688999999999986 7999999999999999989888877665
No 167
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.89 E-value=0.035 Score=59.34 Aligned_cols=93 Identities=23% Similarity=0.344 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCC------CCeEEEEEecC-CC---chhhhh--cCccc-
Q 003029 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FP---SSEIHR--TLPSR- 278 (856)
Q Consensus 212 ~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~------~~~i~~flH~P-fP---~~e~fr--~lp~~- 278 (856)
..|.-.++.-++.+...-...||||+||||..++|.++|.... ++++.+++|.. |. +.+.+. .+|+.
T Consensus 114 ~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~ 193 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEY 193 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGG
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHH
Confidence 3443334444444333212579999999999999999998753 69999999974 22 112221 23321
Q ss_pred -------------HHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 279 -------------SDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 279 -------------~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
.-+-.|+..||.|..-++.|++.-++
T Consensus 194 ~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 194 FQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp S-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred hccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24556799999999999999876543
No 168
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.79 E-value=0.013 Score=57.36 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=38.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
++++||+||||++..... .... ....++-+.+.++|+.|.+ .|..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~--~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRS--LDDWQLRPGAVPALLTLRA-AGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCC--HHHeEEcCChHHHHHHHHH-CCCEEEEEeCCCc
Confidence 468999999999874211 0011 1123567889999999986 7999999998763
No 169
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.60 E-value=0.031 Score=54.75 Aligned_cols=92 Identities=16% Similarity=0.236 Sum_probs=47.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-----HHHHHH-hhcCCEEEEeCHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-----SDLLRA-VLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-----~~il~~-ll~aDlIgf~t~~~~~~Fl~ 304 (856)
+.|+|++|.++...+...... +.++.+++|.+++.........+. ..+... ...+|.|..-+....+.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 569999999887765544333 889999999987421111111111 111111 34688888777655554432
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhh
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~ 341 (856)
.|. ...++.++|+|||.+.|+
T Consensus 157 -----~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hCC-----------cccCCEEEECCccHHHcC
Confidence 232 246899999999999884
No 170
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.58 E-value=0.049 Score=59.16 Aligned_cols=65 Identities=9% Similarity=-0.119 Sum_probs=44.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------Cc-cccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FL-HYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~-~~l~~~~ 832 (856)
+.+-.+..+++.+++++| ++++.+++||| ..+|++| -+.++-. ++.|... .+ |-+.++.
T Consensus 154 ~~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~a-A~~aGi~--~i~v~~G~~~~~~l~~~~~~~vi~~l~ 223 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLA-AKAAGVQ--CVALSYGYNHGRPIAEESPALVIDDLR 223 (272)
T ss_pred CCCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHH-HHHCCCe--EEEEecCCCCchhhhhcCCCEEECCHH
Confidence 334556788999999998 56899999999 9999998 5554322 4444211 12 6777776
Q ss_pred HHHHHH
Q 003029 833 CMRFLS 838 (856)
Q Consensus 833 ~~~~~l 838 (856)
++.+++
T Consensus 224 el~~~~ 229 (272)
T PRK13223 224 ALLPGC 229 (272)
T ss_pred HHHHHH
Confidence 666443
No 171
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=95.41 E-value=0.5 Score=54.88 Aligned_cols=203 Identities=13% Similarity=0.136 Sum_probs=104.1
Q ss_pred eecccChhhhhhhhcCC-chHHH-HHHHHHHhc---CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 003029 331 FPIGIDSERFIRALEIN-PVQVH-IKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~-~~~~~-~~~lr~~~~---~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~ 405 (856)
+-||.-.......+.+. ++... +-.-|+.|+ +..++.+..++ .|=-+..++.+.++|+..|+.+ |++..
T Consensus 248 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~ 321 (468)
T PF13844_consen 248 VQNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLR 321 (468)
T ss_dssp EEECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEE
T ss_pred eecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEee
Confidence 46777666555433221 11100 011234442 44444445554 5667899999999999999854 66665
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
.+. ... +.+++.+.+ .|- +-..++| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+
T Consensus 322 ~~~--~~~------~~l~~~~~~----~Gv-~~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm--- 383 (468)
T PF13844_consen 322 FPA--SGE------ARLRRRFAA----HGV-DPDRIIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM--- 383 (468)
T ss_dssp TST--THH------HHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH---
T ss_pred CCH--HHH------HHHHHHHHH----cCC-ChhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc---
Confidence 443 111 223333333 232 2234665 667788999999999999999987776 5678999999
Q ss_pred CCceEEEeCCCC-chh-----hc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCHHHHHH
Q 003029 486 KKGVLILSEFAG-AAQ-----SL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAE 553 (856)
Q Consensus 486 ~~g~lVlSe~aG-~~~-----~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~---~~~~~W~~ 553 (856)
|++|+|--+- .+. .+ |-.-++ -.|.++..+.-.++-+++ +.++...++.++...+ +|...|+.
T Consensus 384 --GVPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A~s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar 458 (468)
T PF13844_consen 384 --GVPVVTLPGETMASRVGASILRALGLPELI--ADSEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFAR 458 (468)
T ss_dssp --T--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHH
T ss_pred --CCCEEeccCCCchhHHHHHHHHHcCCchhc--CCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHH
Confidence 5666663221 111 11 322222 246677666656666644 3555555555555432 57788888
Q ss_pred HHHHHHHHh
Q 003029 554 TFVSELNDT 562 (856)
Q Consensus 554 ~fl~~l~~~ 562 (856)
.|-..+.+.
T Consensus 459 ~lE~a~~~m 467 (468)
T PF13844_consen 459 NLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777766653
No 172
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.37 E-value=0.045 Score=55.07 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=46.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-HhhHHHHhcccCc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 662 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~~~l~l 662 (856)
-..+++++|+||||+... ...+.+.+.+.|++|.+ .|..++|+|+.+ ...+..+...+++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 567999999999999763 23577899999999986 689999999998 4555555554443
No 173
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.30 E-value=0.045 Score=58.07 Aligned_cols=72 Identities=10% Similarity=-0.012 Sum_probs=46.7
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCcc-----c----------------cccccCCChhHHHHHHHhh
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ-----I----------------REMELKLHPDLKQPLNALC 635 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~-----~----------------~~~~~~~s~~~~~~L~~L~ 635 (856)
..++++.++-..-+.-.|+||+|||++++.+.... +.+ . ......|-+.+++.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 35666666664333448999999999975321100 000 0 0123445566999999998
Q ss_pred cCCCCeEEEEcCCCH
Q 003029 636 HDPKTTIVVLSGSDR 650 (856)
Q Consensus 636 ~d~g~~V~I~SGR~~ 650 (856)
+ .|+.++++|||+.
T Consensus 128 ~-~G~~I~iVTnR~~ 141 (237)
T PRK11009 128 K-RGDSIYFITGRTA 141 (237)
T ss_pred H-CCCeEEEEeCCCC
Confidence 5 7999999999963
No 174
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.22 E-value=2.8 Score=47.65 Aligned_cols=129 Identities=16% Similarity=0.175 Sum_probs=79.3
Q ss_pred eecccccCCh-HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 003029 369 VDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (856)
Q Consensus 369 V~Rld~~KGi-~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~ 447 (856)
=+|-...|-+ +..++|.+++.+++|+++ +++...+. .. .+.+++.....+.. .++...
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc---
Confidence 3477766655 888999999999999865 54333221 11 22233332221111 123322
Q ss_pred CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-----------------CCCCchhhc-cCC---e
Q 003029 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----------------EFAGAAQSL-GAG---A 506 (856)
Q Consensus 448 v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-----------------e~aG~~~~l-g~~---g 506 (856)
..+...++++||+.+++| |.+.+|++..+ .|.|+. .+.|.+-.+ |.. -
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchh
Confidence 245677899999999999 79999999985 554443 333333333 111 1
Q ss_pred EEECCCCHHHHHHHHHHHHcCCH
Q 003029 507 ILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 507 ~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
++-+-.+++.+++++..+|.+++
T Consensus 320 liQ~~~~~~~i~~~~~~ll~~~~ 342 (373)
T PF02684_consen 320 LIQEDATPENIAAELLELLENPE 342 (373)
T ss_pred hhcccCCHHHHHHHHHHHhcCHH
Confidence 12234688999999999998765
No 175
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.11 E-value=0.011 Score=54.14 Aligned_cols=54 Identities=15% Similarity=0.266 Sum_probs=38.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH---HHhcccCce
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEYNLW 663 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~l~lg 663 (856)
|+||+||||... .++-|.+.++|+.|.+ .|..++++|-.+...-+ +.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999975 2355778999999986 68999999977654444 444444443
No 176
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.01 E-value=0.024 Score=57.23 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=38.3
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
|++|||.||||+...+.. . ...+..+.|.+.++|++|.+ .|..++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~--~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----H--EIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----C--CHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999543211 0 01244567889999999986 7999999997643
No 177
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=94.82 E-value=3.5 Score=45.87 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=102.2
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEee-cccccCChHHHHHHHHHHHHhCcCccCceEEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~-Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v 404 (856)
..+-.+|.-+|+..-.... ......++-+-|| .-|++-+....|+++..... .+ +.++ |
T Consensus 160 ~~~lyfPt~m~~~~~~~~~-------------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIi-v 219 (360)
T PF07429_consen 160 ASLLYFPTRMDPALTLSEK-------------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKII-V 219 (360)
T ss_pred ceEEEcCCCCchhhhcccc-------------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEE-E
Confidence 3466778878765322110 0111223333344 66888888888877765432 12 3332 1
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-cCCChhHHHHHhhc
Q 003029 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQ 483 (856)
Q Consensus 405 ~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~-EG~~Lv~lEama~~ 483 (856)
|- +-+...+++.++|.+.+.++ ||.. .+..+...++.+|+.++++.||++++...| .|+|..++ .+.+
T Consensus 220 --PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~- 288 (360)
T PF07429_consen 220 --PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL- 288 (360)
T ss_pred --EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-
Confidence 21 11112345566776665554 4421 355578899999999999999999999975 89998655 3445
Q ss_pred CCCCceEEEeCCCCchhhccCCeEEE----CCCCHHHHHHHHHHHHc
Q 003029 484 DLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALN 526 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~g~lV----nP~d~~~lA~ai~~aL~ 526 (856)
|.++++|+-.-....+...++.| +.-|...+++|=+++..
T Consensus 289 ---G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 289 ---GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred ---CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhh
Confidence 58999999887777773345433 44566666666555544
No 178
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.69 E-value=0.11 Score=54.40 Aligned_cols=63 Identities=8% Similarity=-0.100 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMCMRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~~~~~l~~ 840 (856)
-..+..+++.++ .+++.++.+|| +.+|+.| =+.++-..+.|.-+.. +.+.+.++.++...|.+
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~a-A~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILA-AKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHH-HHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHhc
Confidence 456677888888 44578999999 9999999 6666533344444421 12888999888877653
No 179
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.66 E-value=0.032 Score=55.54 Aligned_cols=53 Identities=15% Similarity=0.260 Sum_probs=33.4
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG 647 (856)
|+.+||+||||..... +..-.+.+..-.-.++.+.++|++|.+ .|..|+|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 6899999999996532 100011111123356689999999986 6999999985
No 180
>PTZ00445 p36-lilke protein; Provisional
Probab=94.64 E-value=0.096 Score=54.00 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=51.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCC----CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVD----TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~----~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.++.+.+.+++..+|+|++|+|-||++... +|. .........++|+.+..+.+|.+ .|+.|+|+|=.+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKEL 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchhh
Confidence 456678888999999999999999998211 110 00011233478999999999985 799999999765543
No 181
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.50 E-value=0.055 Score=57.55 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=43.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH--HHhcccC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 661 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~l~ 661 (856)
++++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 4678999999999875 2356889999999986 69999999887665433 5555554
No 182
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.35 E-value=0.066 Score=54.24 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=39.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
+|+++||.||||...... +..... ...+-+.+.++|++|.+ .|..++|+|+.+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSPD--EWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCHH--HeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 689999999999765321 222221 33567889999999986 699999999876
No 183
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.32 E-value=0.12 Score=51.77 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.5
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCC-------HhhHHHHh
Q 003029 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 657 (856)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~-------~~~l~~~~ 657 (856)
.++..+|.++||.|.||++.. ...++++..+.++++++.-+. .|+|+|-.. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 466789999999999999773 567899999999999874332 599999863 44454444
Q ss_pred cccCce
Q 003029 658 QEYNLW 663 (856)
Q Consensus 658 ~~l~lg 663 (856)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 455543
No 184
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.27 E-value=5.5 Score=45.15 Aligned_cols=73 Identities=19% Similarity=0.085 Sum_probs=52.0
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
+. +.+.++..++.+|++.||+++-.|. | ...||.+.+ .|+|.- ..-.+.+ |.+.++| +.|++++.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----g-gi~EA~~lg----~Pvv~l--~~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----S-GIIEAPSFG----VPTINI--GTRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----h-HHHhhhhcC----CCEEee--cCCchhhhhcCeEEEe-CCCHHHHH
Confidence 54 5889999999999999999995552 1 238999984 555522 2222222 4556667 77899999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
No 185
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.26 E-value=0.078 Score=58.16 Aligned_cols=68 Identities=18% Similarity=0.150 Sum_probs=49.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+.+++++|+||||....... -.+-.......+.+.+++.|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS--PYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC--ccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 45789999999999764210 0000001234678899999999986 69999999999998887777665
No 186
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.16 E-value=0.081 Score=52.80 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=38.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
|++|||.||||....+. ....+.+ ...++-+.+.++|++|.+ +|.+++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~--~~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS--DFQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCC--ccccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 68999999999985321 1111111 234567889999999986 79999999985
No 187
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.15 E-value=1.4 Score=50.67 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=80.3
Q ss_pred eEEEeec-ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc---------ccC
Q 003029 365 VMLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING---------RFG 434 (856)
Q Consensus 365 iIl~V~R-ld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~---------~~g 434 (856)
+++.-+| =+-.++++..++|++.+.++ |+ +.++....+. ..+..+++.+.+. .++. .|.
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3444556 44556888999999998655 54 4455444332 2233333333221 1100 000
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc---hhhcc------CC
Q 003029 435 TLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA---AQSLG------AG 505 (856)
Q Consensus 435 ~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~---~~~lg------~~ 505 (856)
. ..+.++ ....+...+|++||++|..| |.+..|+++++ .|.|+--+.+- +..+. ..
T Consensus 278 ~---~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~ 342 (396)
T TIGR03492 278 K---GTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGG 342 (396)
T ss_pred c---CceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCC
Confidence 0 012221 12367899999999999986 45669999994 67777653222 11110 25
Q ss_pred eEEECCCCHHHHHHHHHHHHcCC
Q 003029 506 AILVNPWNITEVANAIARALNMS 528 (856)
Q Consensus 506 g~lVnP~d~~~lA~ai~~aL~~~ 528 (856)
++.+...+++.+++++.++|+++
T Consensus 343 ~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 343 SVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred EEecCCCCHHHHHHHHHHHHcCH
Confidence 56666678899999999999854
No 188
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=94.15 E-value=6.7 Score=44.15 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=119.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
.+|+|.||.=-.-.++..+-....++||++. |-=--+.+.. -|.-++..|.+. -||+-.--|..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 3499999876666666555555667887652 2211111211 123344444322 356666667776666553
Q ss_pred HhCcccCCCceeeCCeeEEEEEe-ecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeeccccc---CChHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI---KGIPQKLLA 384 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~vi-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~---KGi~~~L~A 384 (856)
.|.+ ..+|.++ ..++|.-........+... ...+.....++.+++..=|.... ......+.+
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 2321 2233333 4567754322211111110 11221122333444444343332 345677777
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
++.+.+. ++ +.+|....++ | .....+.+...+++ .+++ ..+++..++.++++.|++.|
T Consensus 206 l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEEE
Confidence 7777766 44 3344443211 2 22333333332221 2554 67899999999999999998
Q ss_pred ECCCCcCCChhHH-HHHhhcCCCCceEEEeCCCCchhhc-c-CCeEEECCCCHHHHHHHHHHHHcC
Q 003029 465 VTSLRDGMNLVSY-EFVACQDLKKGVLILSEFAGAAQSL-G-AGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 465 ~~S~~EG~~Lv~l-Eama~~~~~~g~lVlSe~aG~~~~l-g-~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
--|- .+. ||.+++ .|+|.=...|-.++. . ...++|. .|.+++.++|.+++..
T Consensus 264 gdSs------GI~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 8773 345 999994 677766667766665 1 3455665 8999999999999975
No 189
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.09 E-value=0.067 Score=56.76 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=41.2
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcc
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 659 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 659 (856)
++||+||||.+.. .+-+.+.++|+.|.+ .|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999862 234589999999986 689999998 9999988877766
No 190
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=93.83 E-value=2.8 Score=46.90 Aligned_cols=198 Identities=14% Similarity=0.179 Sum_probs=106.5
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
||.+++..--+..+-+|+-||=|+||-+++. .-..+..++.-|-+|-+ .|..|.|+|.=.+...+++
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHH
Confidence 3445555444445789999999999999853 22345556666666665 5999999999888776655
Q ss_pred hccc-C----------c---------eEEeeCceEEEec-----------CCeeeecccccCChHHH-HHHHHHHHH---
Q 003029 657 FQEY-N----------L---------WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWV-DSLKHVFEY--- 701 (856)
Q Consensus 657 ~~~l-~----------l---------gliaenG~~i~~~-----------~~~w~~~~~~~~~~~w~-~~v~~i~~~--- 701 (856)
...+ | + -+-+|.-+.++.. .+.|... + -..|. +.+.++++.
T Consensus 200 ~~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~--~--m~~W~~~dI~~lLD~AE~ 275 (408)
T PF06437_consen 200 EERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP--E--MKTWSEEDITELLDIAEA 275 (408)
T ss_pred HHHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc--c--ccCcCHHHHHHHHHHHHH
Confidence 4443 1 1 2334444455431 1245321 1 12343 344444432
Q ss_pred ----HHh--cCCCcEEeeecceEEEEeecCChhhhHHHHHHHH----HHHhcC--CCCCCCeEEEEcC--cEEEEEeCCC
Q 003029 702 ----FTE--RTPRSHFEQRETSLVWNYKYADVEFGRIQARDML----QHLWTG--PISNASVEVVQGS--KSVEVRAVGV 767 (856)
Q Consensus 702 ----~~~--rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~----~~L~~~--~~~~~~v~v~~g~--~~vEV~p~gv 767 (856)
... ..| .-|-.|+-++-+--. ....+...|.+|+. ..| +. .-.+-++-...|. -+|+| .
T Consensus 276 ~L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----G 348 (408)
T PF06437_consen 276 ALRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----G 348 (408)
T ss_pred HHHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----C
Confidence 221 133 334445444432211 11111223333332 333 21 1122455556553 36776 4
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 801 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~ 801 (856)
||.-||..+.+.+. +...|.+.+++-+|| .+
T Consensus 349 dKs~GV~~lQ~y~~--~~~~i~~~~tLHVGD-QF 379 (408)
T PF06437_consen 349 DKSLGVRALQKYFD--PEGGIKPSETLHVGD-QF 379 (408)
T ss_pred CcHHhHHHHHHHHH--hccCCCccceeeehh-hh
Confidence 79999999888881 011167899999999 54
No 191
>PRK06769 hypothetical protein; Validated
Probab=93.72 E-value=0.066 Score=54.00 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=39.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
+.+|+|++|.||||..+..-. ....-.+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~-------~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH-------YPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC-------CHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 468999999999997652100 00133567899999999986 699999999864
No 192
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=93.67 E-value=0.11 Score=49.74 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=44.2
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccH----HHH-HHhhcCCEEEEeCHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS----DLL-RAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~----~il-~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++.. .+. ..+-.||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 47999999997543211 11111 122 3355789999998877776653
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecc
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~G 334 (856)
.|. ...+|.++|||
T Consensus 147 -----~g~-----------~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YGV-----------PPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hCC-----------CCCcEEEeCcC
Confidence 222 34578899987
No 193
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.33 E-value=0.091 Score=55.31 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=47.3
Q ss_pred CCeEEEEecCCccCCCCCCCC-C-CCc------c----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh---HH
Q 003029 590 NNRLLILGFNATLTEPVDTPG-R-RGD------Q----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 654 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~-~-~~~------~----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~ 654 (856)
.+-+++||+|-|++++.+--. + ++. . .....+.+-+.++++++.|.+ .|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 456899999999998642000 0 000 0 112355677899999999986 799999999999766 33
Q ss_pred HHhccc
Q 003029 655 KNFQEY 660 (856)
Q Consensus 655 ~~~~~l 660 (856)
+++...
T Consensus 155 ~nL~~~ 160 (229)
T TIGR01675 155 DNLINA 160 (229)
T ss_pred HHHHHc
Confidence 444443
No 194
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.32 E-value=0.17 Score=51.06 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=31.1
Q ss_pred hhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+++.+.|+.+.+ .|..|+|+||-+...++.....+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 567899999876 6999999999999999888776654
No 195
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=93.01 E-value=0.18 Score=52.40 Aligned_cols=61 Identities=8% Similarity=-0.091 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKMCMRFL 837 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~~~~~~ 837 (856)
|...+.+++++++ .+++.+++||| +.+|+.+ -+.++- .+|.|... +.|.+.++.++..+
T Consensus 140 ~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~a-a~~aG~--~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 140 DPEPVLKALELLG------AKPEEALMVGD-NHHDILA-GKNAGT--KTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred CcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHCCC--eEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 4556677888887 56789999999 9999888 544432 34444211 12778888877666
Q ss_pred HH
Q 003029 838 SQ 839 (856)
Q Consensus 838 l~ 839 (856)
+.
T Consensus 210 i~ 211 (214)
T PRK13288 210 VG 211 (214)
T ss_pred Hh
Confidence 54
No 196
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.97 E-value=0.18 Score=56.69 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=40.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
++|++|||.||||....... ...+. .....+-|.+.+.|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~-~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDS-LDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccC-cccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863211 00111 1245678899999999975 79999999984
No 197
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=92.94 E-value=8.9 Score=43.41 Aligned_cols=87 Identities=21% Similarity=0.203 Sum_probs=58.1
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCch--hh------c-c-CCeEEECCCC--HHHHH
Q 003029 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L-G-AGAILVNPWN--ITEVA 518 (856)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~--~~------l-g-~~g~lVnP~d--~~~lA 518 (856)
+++.++|++||+.+.=|= ++++.|..|++ .|.|+=-+...+ ++ + . ..|..+.-.+ ++.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999886542 58899999995 677766665552 22 2 1 2466665555 88999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 519 NAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 519 ~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
+.|.++++. ++....|..+.+.....+
T Consensus 316 ~~i~~l~~~-~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 316 ELILRLLSN-PEKLKAMAENAKKLGKPD 342 (357)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHhcCCCC
Confidence 999999986 334444444444433333
No 198
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=92.73 E-value=0.18 Score=51.71 Aligned_cols=49 Identities=6% Similarity=-0.141 Sum_probs=36.7
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCC-------Cc-cccCCHHHHHHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-------FL-HYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-------~~-~~l~~~~~~~~~l~~~~~ 843 (856)
.+.+++||| +.+|..| .++++ .+|.++.. .+ +.+.++.++..+|..++.
T Consensus 144 ~~~~v~iGD-s~~D~~~-~~aa~---~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTM-LGEAD---AGILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred CCeEEEEeC-CHHHHHH-HHhCC---CCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 367999999 9999999 77665 34555432 12 479999999998888764
No 199
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=92.62 E-value=0.1 Score=54.49 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--------C-CccccCCHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--------S-FLHYLRMKMCMRF 836 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--------~-~~~~l~~~~~~~~ 836 (856)
|..|..+++. ++ ..++.+++||| +.+|..| .+.+ ++.+.-+. . +.+.+.+..++..
T Consensus 146 ~~~K~~~l~~----~~------~~~~~~i~iGD-s~~Di~a-a~~A---g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRK----LS------DTNDFHIVIGD-SITDLEA-AKQA---DKVFARDFLITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHH----hc------cCCCCEEEEeC-CHHHHHH-HHHC---CcceeHHHHHHHHHHcCCCccccCCHHHHHH
Confidence 4457776654 34 34568999999 9999988 6544 33222110 1 2266788888888
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
.|+++.
T Consensus 211 ~l~~~~ 216 (219)
T PRK09552 211 ELKHLL 216 (219)
T ss_pred HHHHHh
Confidence 777653
No 200
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=92.41 E-value=0.25 Score=50.03 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.6
Q ss_pred CeEEEEecCCccCCCCCC-----CCCCCcccc-------ccccCCChhHHHHHHHhhcCCCCeEEEEcCC-CHhhHHHHh
Q 003029 591 NRLLILGFNATLTEPVDT-----PGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 657 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~-----p~~~~~~~~-------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 657 (856)
.||++||+|+||.+..-. |-...++.. .....+-+.+.++|+.|.+ +|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 489999999999986421 100011111 1234566889999999986 79999999998 888777777
Q ss_pred cccC
Q 003029 658 QEYN 661 (856)
Q Consensus 658 ~~l~ 661 (856)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6654
No 201
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.38 E-value=0.23 Score=58.69 Aligned_cols=71 Identities=7% Similarity=0.110 Sum_probs=46.4
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH------------hhHHHH
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR------------NVLDKN 656 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~------------~~l~~~ 656 (856)
...|++|||+||||......- .... .+..-..+.+.+.+.|++|.+ .|..++|+|..+. ..+..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~-~~~~-~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~i 242 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGK-VFPK-GPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAKIEAI 242 (526)
T ss_pred ccCcEEEEECCCCccccCCCc-cCCC-CHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHHHHHH
Confidence 457999999999999653100 0000 000111256889999999986 6999999998665 235566
Q ss_pred hcccCc
Q 003029 657 FQEYNL 662 (856)
Q Consensus 657 ~~~l~l 662 (856)
+..+++
T Consensus 243 L~~lgi 248 (526)
T TIGR01663 243 VAKLGV 248 (526)
T ss_pred HHHcCC
Confidence 666654
No 202
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.25 E-value=0.26 Score=53.28 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=47.7
Q ss_pred cCCeEEEEecCCccCCCCCCCC-----CCC---ccc----cccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH--
Q 003029 589 SNNRLLILGFNATLTEPVDTPG-----RRG---DQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 654 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~-----~~~---~~~----~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~-- 654 (856)
.+...|+||+|+|+++..+--+ ..+ ... ......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567899999999997642100 000 001 01234566789999999986 69999999999865544
Q ss_pred -HHhcccCc
Q 003029 655 -KNFQEYNL 662 (856)
Q Consensus 655 -~~~~~l~l 662 (856)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
No 203
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.06 E-value=0.32 Score=47.66 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=48.1
Q ss_pred CCeEEEEecCCccCCCCC--CCCCC-Ccc-cc--------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 590 NNRLLILGFNATLTEPVD--TPGRR-GDQ-IR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~--~p~~~-~~~-~~--------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+++++++|+||||+.... .++.. ..+ .. .....+-|-+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998632 11100 000 00 1122456789999999973 7999999999999998888
Q ss_pred cccC
Q 003029 658 QEYN 661 (856)
Q Consensus 658 ~~l~ 661 (856)
+.++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7764
No 204
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.91 E-value=0.25 Score=49.22 Aligned_cols=40 Identities=18% Similarity=0.374 Sum_probs=34.9
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
+.+.+|+.+++.+++.++ ++++.++++|| +.||.+| ++.+
T Consensus 138 ~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~-~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPM-LKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHH-HhcC
Confidence 567899999999999887 56789999999 9999999 8754
No 205
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.89 E-value=0.092 Score=52.42 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=22.6
Q ss_pred hhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
+.+.+.|+.|.+ .|..++|+||.....++.++..++
T Consensus 76 ~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g 111 (177)
T TIGR01488 76 PGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLG 111 (177)
T ss_pred cCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcC
Confidence 455666666654 466677777776666666666554
No 206
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=91.70 E-value=0.42 Score=51.56 Aligned_cols=57 Identities=5% Similarity=-0.078 Sum_probs=34.0
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC--------CccccCCHHHHHHHHH
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS--------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~--------~~~~l~~~~~~~~~l~ 839 (856)
.+.+++++++ .+++.+++||| +.+|+.+ +...|+ +|.|... +.|-+.++.++...+-
T Consensus 170 ~~~~a~~~l~------~~p~~~l~IgD-s~~Di~a----A~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~ 235 (260)
T PLN03243 170 MFMYAAERLG------FIPERCIVFGN-SNSSVEA----AHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDL 235 (260)
T ss_pred HHHHHHHHhC------CChHHeEEEcC-CHHHHHH----HHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHH
Confidence 4455566677 56788999999 8888665 444443 4455321 1255666666554443
No 207
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.69 E-value=22 Score=40.34 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=49.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc----hhhc-c-CCeEEECCC--CHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL-G-AGAILVNPW--NIT 515 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~----~~~l-g-~~g~lVnP~--d~~ 515 (856)
+.+++++. +++..||++| ..-|+ -+..|+++++ .|+|+.-..+= +..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 46777765 4578899999 34565 5679999994 77777766541 2222 1 235555554 789
Q ss_pred HHHHHHHHHHc
Q 003029 516 EVANAIARALN 526 (856)
Q Consensus 516 ~lA~ai~~aL~ 526 (856)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
No 208
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=91.40 E-value=0.076 Score=51.88 Aligned_cols=46 Identities=15% Similarity=0.131 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
-+|-.+.+.|+++++ +.++++.++|| |.||.++ |+.+ ++++.|.+.
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpv-m~~v---Gls~a~~dA 127 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPV-MEKV---GLSVAVADA 127 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHH-HHHc---CCccccccc
Confidence 489999999999999 67899999999 9999999 7755 777777654
No 209
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.26 E-value=0.022 Score=60.25 Aligned_cols=84 Identities=8% Similarity=0.095 Sum_probs=51.7
Q ss_pred CCeEEEEecCCccCCCCCC------------CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+...|+||+|+|++++... |.....-.......+-|.+++.++.+.+ .|..|+++|||+...-+...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREATE 149 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHHH
Confidence 4568999999999864211 0000000001123444568899999986 79999999999988666555
Q ss_pred ccc-CceEEeeCceEEEe
Q 003029 658 QEY-NLWLAAENGMFLRC 674 (856)
Q Consensus 658 ~~l-~lgliaenG~~i~~ 674 (856)
..+ ..|+-.-++.+++.
T Consensus 150 ~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 150 KNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHTTSTBSCGEEEE
T ss_pred HHHHHcCCCccchhcccc
Confidence 555 23433335555554
No 210
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=91.19 E-value=0.17 Score=52.57 Aligned_cols=41 Identities=12% Similarity=0.037 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCcCCcCCCC-cceEEEEecCCcccccccccccccCcce--EEe
Q 003029 769 KGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKNCNLPLQFLMQTIST--VRL 820 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~-~d~vla~GD~~~nDe~M~f~~~~~~~~~--v~V 820 (856)
+..++.+++++++ ++ ++.+++||| ..+|+.+ ++..|+. |.|
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~a----a~~aG~~~~i~~ 190 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEA----GINAGAGAVVGV 190 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHH----HHHCCCCeEEEE
Confidence 4556677777777 43 688999999 8888766 5555543 445
No 211
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.09 E-value=0.32 Score=48.20 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=43.0
Q ss_pred EEEEecCCccCCCCCCCCCCCcccccc-ccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhH---HHHhccc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREM-ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQEY 660 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~-~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l---~~~~~~l 660 (856)
++++|+|||++.+.- +++-.+-. ....++-+.++.+++++ +|..++-+|+|+.... ..|+...
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 478999999998731 11111100 12567789999999985 7999999999997654 3455544
No 212
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=91.04 E-value=0.41 Score=49.98 Aligned_cols=42 Identities=2% Similarity=-0.155 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
..+..+++.+| .+++++++||| +.+|+++ -+.++- -+|.|..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~igD-s~~Di~a-A~~aG~--~~i~v~~ 193 (222)
T PRK10826 152 EVYLNCAAKLG------VDPLTCVALED-SFNGMIA-AKAARM--RSIVVPA 193 (222)
T ss_pred HHHHHHHHHcC------CCHHHeEEEcC-ChhhHHH-HHHcCC--EEEEecC
Confidence 45677888888 56899999999 9999888 444432 3555643
No 213
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=90.72 E-value=0.41 Score=49.79 Aligned_cols=61 Identities=8% Similarity=-0.117 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC-----------CCccccCCHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS-----------SFLHYLRMKMCMRFLS 838 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~-----------~~~~~l~~~~~~~~~l 838 (856)
..++..++++++ .+++.++.||| +.+|.++ .+.++-. +|.|.. .+.|.+.++.++..+|
T Consensus 152 ~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~-a~~~g~~--~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 152 PAPLLLACEKLG------LDPEEMLFVGD-SRNDIQA-ARAAGCP--SVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred hHHHHHHHHHcC------CChhheEEECC-CHHHHHH-HHHCCCc--EEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 567888888887 56789999999 9999999 6665433 444421 1228899999988877
Q ss_pred HH
Q 003029 839 QN 840 (856)
Q Consensus 839 ~~ 840 (856)
++
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
No 214
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=90.66 E-value=0.32 Score=51.15 Aligned_cols=62 Identities=8% Similarity=-0.109 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcce--EEeCCC------Cc-cccCCHHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIST--VRLDSS------FL-HYLRMKMCMRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~--v~V~~~------~~-~~l~~~~~~~~~l~~ 840 (856)
-....+++++++ .+++.+++||| ..+|... +...|+. +.|.+. .+ ..+++..++..+|+.
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~a----A~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDA----AAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPS 220 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH----HHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhh
Confidence 455677778887 56889999999 8887444 6666653 456331 12 566888888888776
Q ss_pred HH
Q 003029 841 YL 842 (856)
Q Consensus 841 ~~ 842 (856)
+.
T Consensus 221 l~ 222 (224)
T PRK14988 221 LM 222 (224)
T ss_pred hc
Confidence 53
No 215
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=90.16 E-value=0.72 Score=47.20 Aligned_cols=40 Identities=18% Similarity=0.362 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+-+.+.++|+.|.+ .|+.++|+||-...........+++
T Consensus 127 ~~~~~~~~~l~~L~~-~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 127 PLRPGAKEALQELKE-AGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EBHTTHHHHHHHHHH-TTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred cchhhhhhhhhhhhc-cCcceeeeecccccccccccccccc
Confidence 466789999999987 6999999999999999888888776
No 216
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=90.14 E-value=0.34 Score=52.13 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=46.1
Q ss_pred CCeEEEEecCCccCCCCCCCCC--CC------cccc-----ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 590 NNRLLILGFNATLTEPVDTPGR--RG------DQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~--~~------~~~~-----~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
.+-+++||+|+|++++.+--+. .+ .... ...+++-|.+++..+.|.+ .|.+|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 3568999999999965321000 00 0011 1245667789999999986 7999999999987654444
Q ss_pred hccc
Q 003029 657 FQEY 660 (856)
Q Consensus 657 ~~~l 660 (856)
..++
T Consensus 179 ~~NL 182 (275)
T TIGR01680 179 EANL 182 (275)
T ss_pred HHHH
Confidence 4444
No 217
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=90.11 E-value=3.7 Score=48.98 Aligned_cols=169 Identities=14% Similarity=0.089 Sum_probs=87.8
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHH
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEY 701 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~ 701 (856)
++.+.++-.|+-|.+ .|++||..||-..+... .||-+-..+.. +...+.+. +..-+..+..-++.
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~---------ciAkSs~L~sR-~q~ihv~~----~v~sr~dah~eL~~ 722 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETAI---------CIAKSSRLFSR-GQYIHVIR----SVTSRGDAHNELNN 722 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhhee---------eeehhccceec-CceEEEEE----ecCCchHHHHHHHH
Confidence 466778888888885 79999999998766542 23322222221 11111111 11124555555666
Q ss_pred HHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhC
Q 003029 702 FTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV 781 (856)
Q Consensus 702 ~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~ 781 (856)
+...+..+.+-. +.++ ++ ..+-+.+++ -++....+ ..|=+|..-.-|+..+..|-++-+
T Consensus 723 lR~k~~~aLvi~-G~Sl---------~~---cl~yye~Ef-~el~~~~~-------aVv~CRctPtQKA~v~~llq~~t~ 781 (1051)
T KOG0210|consen 723 LRRKTDCALVID-GESL---------EF---CLKYYEDEF-IELVCELP-------AVVCCRCTPTQKAQVVRLLQKKTG 781 (1051)
T ss_pred hhcCCCcEEEEc-CchH---------HH---HHHHHHHHH-HHHHHhcC-------cEEEEecChhHHHHHHHHHHHhhC
Confidence 654333333221 1111 11 111111111 11111111 123335445568777766555533
Q ss_pred cCCcCCCCcceEEEEecCCcccccccccccccCcceEE--eCCC---Cc-cccCCHHHHHHHH
Q 003029 782 HSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVR--LDSS---FL-HYLRMKMCMRFLS 838 (856)
Q Consensus 782 ~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~--V~~~---~~-~~l~~~~~~~~~l 838 (856)
..|.|||| +.||..| +++++ .|++|- -|+. +| |.+..-.++.++|
T Consensus 782 ---------krvc~IGD-GGNDVsM-Iq~A~-~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 782 ---------KRVCAIGD-GGNDVSM-IQAAD-VGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred ---------ceEEEEcC-CCccchh-eeecc-cceeeecccccccchhccccHHHHHHHHHHh
Confidence 57999999 9999999 98874 333331 1222 23 8877777777765
No 218
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=89.84 E-value=0.85 Score=54.78 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=52.1
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC-CeEEEEcCCCHhhHHHHhcccCc
Q 003029 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.....+.+++..||+++..-. ....+-|.+.++|++|.+ .| ++++|+||.+....+...+++++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 44555678899999998875421 134578899999999986 68 99999999999999888877654
No 219
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=89.74 E-value=0.77 Score=47.86 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=31.1
Q ss_pred CCChhHHHHHH-HhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLN-ALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~-~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+-|.+++.|+ .+.+ .|..++|+|+.+...++++....
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHhc
Confidence 45688999996 6664 69999999999999998888663
No 220
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.67 E-value=0.61 Score=51.85 Aligned_cols=65 Identities=22% Similarity=0.245 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 590 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
.+|+|++|+|+||..-+- +-|..+-+ ...+.+.+.+.|++|.+ +|+.++|+|..+...+...+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~----~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLN----LSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccc----cCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 368999999999997530 00100000 12345789999999986 7999999999999999998887
No 221
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=89.30 E-value=12 Score=42.60 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=62.1
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh----hc-c-CCeEEECC--CCHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SL-G-AGAILVNP--WNIT 515 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~----~l-g-~~g~lVnP--~d~~ 515 (856)
+.+.+++. .++..||++|..+ |.| +..|+++++ .|+|+.-..+--. .+ . ..|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 46778865 5678999988654 655 679999994 7777755443221 12 1 23566654 4689
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 003029 516 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 555 (856)
Q Consensus 516 ~lA~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~f 555 (856)
+++++|.++|.++ +.+++.+++.+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 344444555554443 3445555433
No 222
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=89.19 E-value=0.75 Score=46.15 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=29.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
+.|..|+..++++++.. ++.++++|| +.||..| -+.+
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~a-a~~~ 181 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCP-AKLS 181 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-Ccchhch-HhcC
Confidence 56778999888887642 467999999 9999888 5544
No 223
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=88.80 E-value=0.47 Score=51.30 Aligned_cols=47 Identities=11% Similarity=0.192 Sum_probs=37.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
+++.++||+||||... .++-|...++|++|.+ .|..++++|-.+...
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s 53 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRS 53 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCC
Confidence 4677999999999965 2355789999999997 799999998665543
No 224
>PRK08238 hypothetical protein; Validated
Probab=88.46 E-value=0.91 Score=53.33 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=38.5
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEeeCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 669 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliaenG 669 (856)
+..+.+++.|+++.+ .|.+++|+|+.+...++...+++++ .+++.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356889999999986 7999999999999999988888763 4555544
No 225
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=88.21 E-value=0.89 Score=47.76 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=29.5
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+-+-+.+.|..|.+ .|+.++++|+.+...++..+..++
T Consensus 86 ~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 86 KPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 455667888888875 578888888888888777776654
No 226
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=88.05 E-value=1.1 Score=46.77 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
..+.|.+.+.|+.|.+ .|+.++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 3566778888888875 68999999999888888887765
No 227
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=87.61 E-value=0.021 Score=69.46 Aligned_cols=251 Identities=12% Similarity=0.071 Sum_probs=132.9
Q ss_pred CcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh---
Q 003029 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV--- 652 (856)
Q Consensus 576 ~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~--- 652 (856)
.++..++.+..-.-+.-|.++|+||||-.+..++. .+.++..+..+-.+..+ .-.-.++|||.+..
T Consensus 174 pfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~a---------rhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~ 242 (732)
T KOG1050|consen 174 PFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYA---------RHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVK 242 (732)
T ss_pred CCChHHHHHhcccHHHHHHhhhccCccccccccHH---------HHHHHHHHHHHHhhhhc--cCCcceEEeccceeeee
Confidence 34445555444444555889999999999877762 45566555555555543 23345589998665
Q ss_pred -------HHHHhcccCceEEeeCceEEEec--CCeeeecccccC-----ChHHHHHHHHHHHHHHhcCCCcE--------
Q 003029 653 -------LDKNFQEYNLWLAAENGMFLRCT--TGKWMTTMPEHL-----NMEWVDSLKHVFEYFTERTPRSH-------- 710 (856)
Q Consensus 653 -------l~~~~~~l~lgliaenG~~i~~~--~~~w~~~~~~~~-----~~~w~~~v~~i~~~~~~rt~gs~-------- 710 (856)
.....+..+++.++++|..++.. ++.-..-. +.+ ...+.....+.++.|.+-.+...
T Consensus 243 ~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgv-D~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~ 321 (732)
T KOG1050|consen 243 ALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGV-DRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPK 321 (732)
T ss_pred ecccccchHHhhccccchhHHHHHHHHhhhccCCceEecc-cccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCC
Confidence 66666666888999999988742 22110000 111 12344455555555533211111
Q ss_pred ------EeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCc
Q 003029 711 ------FEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVH 782 (856)
Q Consensus 711 ------ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~-~~v~v~~g~~~vEV~p-~gvnKG~av~~ll~~l~~ 782 (856)
+++-..++..||+..+.+|+...+..+ ..+... ...+...+....|+++ ..+.||.++..+...++.
T Consensus 322 ~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV-----~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 322 RTDGKEVEELKFCVSVHVRRINEKFGSASYQPV-----HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cccchHHHHHHHHhHhhhhhhhhccCCcccceE-----EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 111112222222222222211110000 000000 0112233445789997 569999999998887763
Q ss_pred CCcCCCCcceEEEEecCCcccccccccccccC-c--ceEEeCC---C--CccccCCHHHHHH-HHHHHHHHHH
Q 003029 783 SKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT-I--STVRLDS---S--FLHYLRMKMCMRF-LSQNYLMMAR 846 (856)
Q Consensus 783 ~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~-~--~~v~V~~---~--~~~~l~~~~~~~~-~l~~~~~~~~ 846 (856)
.. .+.+.=...++|| +.+|++- +..++++ . ++..|.. . ..+.++++..+.. .++.+..-++
T Consensus 397 ~~-~~~~lVlsef~G~-~~tl~d~-aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~ 466 (732)
T KOG1050|consen 397 EN-KKSVLVLSEFIGD-DTTLEDA-AIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAK 466 (732)
T ss_pred cc-cCCceEEeeeccc-ccccccc-CEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHH
Confidence 21 0011224578999 9999999 9999887 2 4444432 1 2266666666655 4444444443
No 228
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=87.53 E-value=1.2 Score=50.67 Aligned_cols=23 Identities=9% Similarity=0.065 Sum_probs=17.8
Q ss_pred HHHHhcCCeEEEEecCCccCCCC
Q 003029 584 ERYLRSNNRLLILGFNATLTEPV 606 (856)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~ 606 (856)
..-..+..+.|+||+||||+++.
T Consensus 124 ~~~~~~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 124 QERMGCGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred HHhccCCCCEEEEcCcCcceeCH
Confidence 33334678999999999999864
No 229
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=87.45 E-value=0.93 Score=47.72 Aligned_cols=61 Identities=5% Similarity=-0.159 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHHHHHH
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~~~l~ 839 (856)
..+.++++++| ++++++++||| +.+|+.+ -+.++-..+.|.-+.. +.|.+.++.++...|+
T Consensus 155 ~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~a-A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 155 LPLLVAAERIG------VAPTDCVYVGD-DERDILA-ARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHHhC------CChhhEEEeCC-CHHHHHH-HHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 45667788888 56899999999 9999888 5555433333322211 1288888888877664
No 230
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=86.90 E-value=1.2 Score=49.73 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=37.1
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCC----CCeEEEEc---CCCHhhHHHHh-ccc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF-QEY 660 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~----g~~V~I~S---GR~~~~l~~~~-~~l 660 (856)
.|+||+||||.... .+-+...++|+.|.. . |..++++| |++.......+ ..+
T Consensus 2 ~~ifD~DGvL~~g~---------------~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 2 GFAFDIDGVLFRGK---------------KPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred EEEEeCcCceECCc---------------cccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 48999999999762 356889999999985 5 67777666 56666644443 443
No 231
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=86.58 E-value=11 Score=41.35 Aligned_cols=124 Identities=18% Similarity=0.153 Sum_probs=82.5
Q ss_pred ceEEEee-cccccCChHHHHHHHHHHHHhCcCccCceEEEEE-EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI-AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 364 ~iIl~V~-Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v-~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
++.+-|| .=|++-.+.+.|+++.+++.+ ++.++.- +.|+ + .+ ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-g-n~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-N-NQ---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-C-CH---HHHHHHHHHHHH---hcCcc---cE
Confidence 4444454 678999999999998877543 2334322 2232 2 23 445666666554 35521 46
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEE
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lV 509 (856)
..++..++.+|+.++++.+|+.++.-- ..|+|..++=- .. |.|+++|+-.-.-..+...|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC----CCcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999999876 59999877643 33 47888887776666663444444
No 232
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=86.53 E-value=4.8 Score=43.84 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=61.4
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
.+++++..|-.|+.+.....++|+..+. +++ .+..|.++.. +.++ ++++++.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSN---PNLD----ELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCC---cCHH----HHHHHHHh-C---C-----CE
Confidence 3578999999999887777788876542 222 2333444432 2222 33444332 1 1 23
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe 494 (856)
.. .++ .+++..++..||+++.+ -|.++.|+++|+ .|.|+-.
T Consensus 227 ~~-~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i~ 267 (279)
T TIGR03590 227 IL-FID--VENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAIC 267 (279)
T ss_pred EE-EeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEEE
Confidence 32 333 36899999999999984 458999999994 5655443
No 233
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=86.10 E-value=0.71 Score=45.54 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=41.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCcc-----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
|+++||+||||+.....+....+. .....-.+-|.+.+.|+.|++ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999765322100000 000112244678888998864 6899999999998888888776
No 234
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=86.09 E-value=1.4 Score=44.41 Aligned_cols=72 Identities=19% Similarity=0.271 Sum_probs=38.3
Q ss_pred CeEEEEecCCccCCCCCC-----CCCC-Ccc-----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCC-CHhhHHHHhc
Q 003029 591 NRLLILGFNATLTEPVDT-----PGRR-GDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQ 658 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~-----p~~~-~~~-----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~ 658 (856)
-|||+||+|+||-+..-+ |-.. ... .....-.+-|.+.++|++|.+ .|+.+++||-- ..+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 479999999999985321 1000 000 011234567889999999986 79999999953 3455666666
Q ss_pred ccCce
Q 003029 659 EYNLW 663 (856)
Q Consensus 659 ~l~lg 663 (856)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 66543
No 235
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=86.06 E-value=3.2 Score=49.67 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=48.7
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCCHhhHHHHhcccCc
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.....+.+++-.||++...-. ....+-+.+.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 338 ~~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 338 ESAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hhCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 334456677778888765421 234577899999999986 799 9999999999999888887664
No 236
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.91 E-value=4.6 Score=45.25 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=81.5
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCC---CcCC---ChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCH
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSL---RDGM---NLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 514 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~---~EG~---~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~ 514 (856)
+.++....+.......|+.-|+++.=+. -++. +.-..|+++|+ |++|.+-..++-..++.+--++--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 3443333344777777788887775443 2333 88899999994 777777777766666544333335799
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (856)
.++.+++..++.-+ +||++..+.+++.| ..|+-..=+..++..+...
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999865 48889888887776 5577666666677766653
No 237
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=85.71 E-value=1.1 Score=46.34 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.|.+.+.|+.|.+ .+ .++|+||-....+++++..+++
T Consensus 68 ~l~pga~ell~~lk~-~~-~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRE-RF-QVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHh-CC-eEEEEeCChHHHHHHHHHHcCC
Confidence 567788888888876 34 8888888888888887777654
No 238
>PLN02940 riboflavin kinase
Probab=85.31 E-value=1.4 Score=50.33 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
.+-+.+.+.|+.|.+ .|+.++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 345677889999986 699999999999988877665
No 239
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=85.15 E-value=1.7 Score=43.20 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=51.1
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccc---------------------cccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~---------------------~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 646 (856)
.+++..+++|+|.||+.....|....... .....++-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35677899999999998765442110000 00122345789999999984 69999999
Q ss_pred CCCHhhHHHHhcccC
Q 003029 647 GSDRNVLDKNFQEYN 661 (856)
Q Consensus 647 GR~~~~l~~~~~~l~ 661 (856)
..+...+...++.++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999999998888873
No 240
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=84.45 E-value=0.85 Score=46.64 Aligned_cols=49 Identities=18% Similarity=0.160 Sum_probs=39.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..+-.|..+++.++++.+ ++++.++++|| +.+|.+| ++.+ +..+.|.++
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~-~~~a---~~~~~v~~~ 199 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPL-LSLV---GHPYVVNPD 199 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHH-HHhC---CCcEEeCCC
Confidence 456789999999999887 56789999999 9999999 7766 455555544
No 241
>PRK10671 copA copper exporting ATPase; Provisional
Probab=84.07 E-value=2.8 Score=52.94 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=50.1
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
....+.....+++++-+||+++-.-. ....+-+...++|++|.+ .|++++++||......+...+.++
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34455556678888889998763211 122356778899999975 699999999999988887777655
Q ss_pred c
Q 003029 662 L 662 (856)
Q Consensus 662 l 662 (856)
+
T Consensus 689 i 689 (834)
T PRK10671 689 I 689 (834)
T ss_pred C
Confidence 3
No 242
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=83.92 E-value=84 Score=35.75 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=84.7
Q ss_pred CceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 363 RKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 363 ~~iIl~V~Rld~~-KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
+.+++..=|-.-. +++...+.|+.++.+++|+.. ++ .|..-. +.. ++.+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 3455556676655 999999999999999998753 22 222111 222 2222 1112221 124
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCce-EEEeCCCCchhhccCC-eEEECCCCHHHHHH
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG-AILVNPWNITEVAN 519 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~-lVlSe~aG~~~~lg~~-g~lVnP~d~~~lA~ 519 (856)
+ +..++...+...|+..|-+.+--| |=..-||-.-+ .| +++-+.+-=++.+..+ -++|+ .|.+.+.+
T Consensus 265 ~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~ 333 (383)
T COG0381 265 K-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILD 333 (383)
T ss_pred E-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHH
Confidence 4 567889999999999997666555 33466887773 33 3344444444444233 45554 57899999
Q ss_pred HHHHHHcCCH
Q 003029 520 AIARALNMSP 529 (856)
Q Consensus 520 ai~~aL~~~~ 529 (856)
++.++++++.
T Consensus 334 ~~~~ll~~~~ 343 (383)
T COG0381 334 AATELLEDEE 343 (383)
T ss_pred HHHHHhhChH
Confidence 9999998754
No 243
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.78 E-value=1.1 Score=45.43 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
.++||+|-||||..+.++ +++. .+-...+.++++|.+|.+ .|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 578999999999876431 2211 244677889999999985 79999999863
No 244
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=83.17 E-value=3.8 Score=44.24 Aligned_cols=61 Identities=16% Similarity=0.265 Sum_probs=48.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
...+|+||+|-||..+... ...+.|.+.+.|.+|.+ .|..+++=|--+.+-+...+..+++
T Consensus 121 ~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~L 181 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELKL 181 (297)
T ss_pred CCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhCC
Confidence 3468999999999987531 23457899999999997 6888888888788888777777653
No 245
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=83.16 E-value=0.66 Score=46.79 Aligned_cols=42 Identities=5% Similarity=-0.114 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL 820 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V 820 (856)
-+-..+.+++++++ .+++.+++||| ...|.+. +...| -+|.|
T Consensus 143 P~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~a----A~~aG~~~i~~ 185 (188)
T PRK10725 143 PAPDTFLRCAQLMG------VQPTQCVVFED-ADFGIQA----ARAAGMDAVDV 185 (188)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHH----HHHCCCEEEee
Confidence 45567899999998 56789999999 8888555 55554 34444
No 246
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=82.02 E-value=64 Score=39.69 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=87.4
Q ss_pred CCceEEEeecccccCChHHH-H---HHHHHHHHhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQK-L---LAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~-L---~Af~~~l~~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~ 436 (856)
+.-++++|-|+..-|--... | .-+.++ ...|+.. ..+++|..|-...++.. -+++-+.+.+++..||..=...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d~~-gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGDYM-GKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT-HH-HHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHHhcChhhc
Confidence 45577899999999986663 3 334444 3456432 23566655543333322 2456667777777777631111
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEE
Q 003029 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILV 509 (856)
Q Consensus 437 ~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lV 509 (856)
+.-.|+|+. ..+-.--..++.+|||.+-+|+ .|.-|..-+=||.- |++.+|..-|+.-++ | ++.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 223578755 4566677788999999999998 59999998888885 899999999986655 5 467777
Q ss_pred CCCCHHHHHH
Q 003029 510 NPWNITEVAN 519 (856)
Q Consensus 510 nP~d~~~lA~ 519 (856)
-.+.+++.+
T Consensus 595 -G~~~~ev~~ 603 (713)
T PF00343_consen 595 -GLTAEEVEE 603 (713)
T ss_dssp -S-BHHHHHH
T ss_pred -CCCHHHHHH
Confidence 345666544
No 247
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=81.32 E-value=1.4 Score=44.93 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
.+|-|.+.++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4577789999999996 68788888888754
No 248
>PRK11587 putative phosphatase; Provisional
Probab=80.57 E-value=0.92 Score=47.26 Aligned_cols=43 Identities=5% Similarity=-0.147 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~ 822 (856)
+.......++.+| +++++++.||| +.+|+.. +...| .+|.|..
T Consensus 140 ~p~~~~~~~~~~g------~~p~~~l~igD-s~~di~a----A~~aG~~~i~v~~ 183 (218)
T PRK11587 140 EPDAYLLGAQLLG------LAPQECVVVED-APAGVLS----GLAAGCHVIAVNA 183 (218)
T ss_pred CcHHHHHHHHHcC------CCcccEEEEec-chhhhHH----HHHCCCEEEEECC
Confidence 4567778888888 66899999999 9888665 55555 4677753
No 249
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.43 E-value=3.2 Score=41.40 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=46.4
Q ss_pred CeEEEEecCCccCCCCCCCCCC-Cc---ccc------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 591 NRLLILGFNATLTEPVDTPGRR-GD---QIR------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~-~~---~~~------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
++.+++|+|+||+.....|... .+ .++ ..--..-|-+.+.|..|.+ ...|+|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 4679999999999765444210 00 000 0111344668899999875 4889999999888888888776
Q ss_pred C
Q 003029 661 N 661 (856)
Q Consensus 661 ~ 661 (856)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
No 250
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=79.34 E-value=3.3 Score=42.65 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=45.1
Q ss_pred cCCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
..+|+++||+|+||+.... .+ . .....=|-+.+-|+.+.+ ...|+|=|..+...++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~-----~---~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE-----T---GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC-----C---ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 4678999999999997521 11 0 011234568999999875 7899999999888888777654
No 251
>PRK14986 glycogen phosphorylase; Provisional
Probab=79.21 E-value=44 Score=41.65 Aligned_cols=150 Identities=11% Similarity=0.125 Sum_probs=100.7
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHH--HhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l--~~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++++-|++.-|--.. +|..++++. ..+|+.. ..+++|..|-...++.. -+.+-+.|..++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999999998777 777766663 3566521 23667666655444432 34566777788877776311112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVn 510 (856)
.-.|+|+. ..+-.--..++.+|||..-+|+ .|.=|..-+=||.- |++-+|..-|+-.++ +++++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 23588755 4455666778999999999997 57777777777664 889999988877655 36788885
Q ss_pred CCCHHHHHH
Q 003029 511 PWNITEVAN 519 (856)
Q Consensus 511 P~d~~~lA~ 519 (856)
...+++++
T Consensus 695 -~~~~ev~~ 702 (815)
T PRK14986 695 -NTAEEVEA 702 (815)
T ss_pred -CCHHHHHH
Confidence 45666654
No 252
>PLN03190 aminophospholipid translocase; Provisional
Probab=78.97 E-value=18 Score=47.44 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
++-+.+.++|++|.+ .|++|+++||-............
T Consensus 726 ~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 726 KLQQGVPEAIESLRT-AGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHh
Confidence 467889999999985 79999999999988876665543
No 253
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=78.67 E-value=13 Score=48.25 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=34.2
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG 669 (856)
++-+.+.++|+.|.+ .|++|+++||-............+ ++..+.
T Consensus 631 ~lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~~~--ii~~~~ 675 (1057)
T TIGR01652 631 KLQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYSCR--LLSRNM 675 (1057)
T ss_pred hhhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHhC--CCCCCC
Confidence 466788999999885 799999999999988877765543 444443
No 254
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=78.11 E-value=2.1 Score=44.42 Aligned_cols=49 Identities=8% Similarity=0.045 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe-CCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL-DSSF 824 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V-~~~~ 824 (856)
--|...++.+++.-+ ++. -++|+|| +.+|.+| |+++++.| +.|.- ||.+
T Consensus 190 g~ka~i~e~~~ele~------~d~-sa~~VGD-SItDv~m-l~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 190 GEKAKIMEGYCELEG------IDF-SAVVVGD-SITDVKM-LEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred cchhHHHHHHHhhcC------CCc-ceeEecC-cccchHH-HHHhhccCceEEEecCCcc
Confidence 346666666666544 222 2799999 9999999 99998765 66655 4443
No 255
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=77.84 E-value=1.3 Score=48.40 Aligned_cols=41 Identities=0% Similarity=-0.175 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL 820 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V 820 (856)
+...+.+++++++ .+++.+++||| +.+|+++ +...| .+|.|
T Consensus 204 ~p~~~~~a~~~~~------~~p~~~l~IGD-s~~Di~a----A~~aG~~~i~v 245 (286)
T PLN02779 204 DPDIYNLAAETLG------VDPSRCVVVED-SVIGLQA----AKAAGMRCIVT 245 (286)
T ss_pred CHHHHHHHHHHhC------cChHHEEEEeC-CHHhHHH----HHHcCCEEEEE
Confidence 3568888999998 56889999999 9999777 54444 34555
No 256
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=77.52 E-value=2.6 Score=43.76 Aligned_cols=17 Identities=18% Similarity=0.372 Sum_probs=14.4
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
...++++||+||||++.
T Consensus 4 ~~~~~iiFD~DGTL~d~ 20 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDS 20 (226)
T ss_pred CcCcEEEEcCCcccccC
Confidence 35789999999999976
No 257
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=77.46 E-value=1.3 Score=47.29 Aligned_cols=57 Identities=7% Similarity=-0.060 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCC--C--------CccccCCHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDS--S--------FLHYLRMKMCMR 835 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~--~--------~~~~l~~~~~~~ 835 (856)
-+...+.+++++++ .+++.+++||| ...|+.. +...| .+|.|.. . +.|-+.++.++.
T Consensus 165 P~p~~~~~a~~~~~------~~~~~~l~vgD-s~~Di~a----A~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 165 PHPDPYLKALEVLK------VSKDHTFVFED-SVSGIKA----GVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred CChHHHHHHHHHhC------CChhHEEEEcC-CHHHHHH----HHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 34577888899998 56899999999 8888666 44444 3555631 1 126777777743
No 258
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=77.45 E-value=2.8 Score=49.68 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=53.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH---HHhccc-CceE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEY-NLWL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~l-~lgl 664 (856)
+-|+|+.|+|||++... ..|+-++...+-= +.-+.++-.++.+ +|.+++-+|.|+..... .++..+ ..|.
T Consensus 529 n~kIVISDIDGTITKSD----vLGh~lp~iGkDWTh~GVAkLyt~Ik~-NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~ 603 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSD----VLGHVLPMIGKDWTHTGVAKLYTKIKE-NGYKILYLSARAIGQADSTRQYLKNVEQDGK 603 (738)
T ss_pred CCcEEEecCCCceEhhh----hhhhhhhhhcCcchhhhHHHHHHHHHh-CCeeEEEEehhhhhhhHHHHHHHHHHhhcCc
Confidence 56899999999999762 2233333222222 2245555666664 79999999999886643 455555 4566
Q ss_pred EeeCceEEEecCC
Q 003029 665 AAENGMFLRCTTG 677 (856)
Q Consensus 665 iaenG~~i~~~~~ 677 (856)
+.-+|=.+..+++
T Consensus 604 ~LPdGPViLSPd~ 616 (738)
T KOG2116|consen 604 KLPDGPVILSPDS 616 (738)
T ss_pred cCCCCCEEeCCCc
Confidence 6667766664433
No 259
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=76.98 E-value=5.4 Score=42.36 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=33.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM 812 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~ 812 (856)
|.+.-||..++++++.... ...+.+.|+++|| +.||.-. -..++
T Consensus 146 ~~NmCK~~il~~~~~~~~~---~g~~~~rviYiGD-G~nD~Cp-~~~L~ 189 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQ---RGVPYDRVIYIGD-GRNDFCP-ALRLR 189 (234)
T ss_pred CCccchHHHHHHHHHHHhh---cCCCcceEEEECC-CCCCcCc-ccccC
Confidence 6788999999999987410 0146789999999 9999876 44443
No 260
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=76.92 E-value=1.4e+02 Score=33.81 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=26.3
Q ss_pred HHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe
Q 003029 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 493 (856)
Q Consensus 453 l~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS 493 (856)
...+|++||+++..| |.+.+|+++++ .|.|+.
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g----~P~Vv~ 260 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIG----TPFVLA 260 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhC----CCEEEE
Confidence 457899999999998 78999999995 565553
No 261
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=76.19 E-value=1.6 Score=44.63 Aligned_cols=30 Identities=13% Similarity=0.036 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccc
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNL 806 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M 806 (856)
.....+++++++ .+++.++.||| +. +|+..
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~IgD-~~~~Di~~ 193 (203)
T TIGR02252 163 PKIFQEALERAG------ISPEEALHIGD-SLRNDYQG 193 (203)
T ss_pred HHHHHHHHHHcC------CChhHEEEECC-CchHHHHH
Confidence 457888999998 56899999999 86 78666
No 262
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=76.18 E-value=1.9e+02 Score=35.11 Aligned_cols=66 Identities=21% Similarity=0.217 Sum_probs=44.0
Q ss_pred HHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-------------------CCCCchhhc-cCCe--EEE--
Q 003029 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGA--ILV-- 509 (856)
Q Consensus 454 ~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-------------------e~aG~~~~l-g~~g--~lV-- 509 (856)
..++++||+++.+| |.+.+|++.++ .|.|+. .+.|....+ |+.- =++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68999999999999 89999999995 555553 233333333 2211 022
Q ss_pred -CCCCHHHHHHHHHHHHcCCH
Q 003029 510 -NPWNITEVANAIARALNMSP 529 (856)
Q Consensus 510 -nP~d~~~lA~ai~~aL~~~~ 529 (856)
.-.+++.+|+++ +.|.+++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred cccCCHHHHHHHH-HHhcCHH
Confidence 235689999986 7777554
No 263
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=76.11 E-value=3.9 Score=41.71 Aligned_cols=44 Identities=16% Similarity=0.291 Sum_probs=37.0
Q ss_pred ccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceE
Q 003029 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 664 (856)
Q Consensus 620 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgl 664 (856)
..+++|-+++....|.+ .|.+|+++||-=+..+....+.+++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred CCccCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 45678899999999997 799999999998888888888776644
No 264
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=76.02 E-value=4 Score=41.73 Aligned_cols=14 Identities=14% Similarity=0.304 Sum_probs=12.2
Q ss_pred CeEEEEecCCccCC
Q 003029 591 NRLLILGFNATLTE 604 (856)
Q Consensus 591 ~rLI~lD~DGTL~~ 604 (856)
.|+++||+||||+.
T Consensus 1 ~~~v~FD~DGTL~~ 14 (205)
T PRK13582 1 MEIVCLDLEGVLVP 14 (205)
T ss_pred CeEEEEeCCCCChh
Confidence 37899999999993
No 265
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=75.99 E-value=18 Score=46.62 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=36.5
Q ss_pred cEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEe
Q 003029 758 KSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 758 ~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V 820 (856)
-.+-+|..-.-|+..++.+.+..+ --++|||| +.||..| ++.+ .++|.|
T Consensus 771 sViCCR~sPlQKA~Vv~lVk~~~~---------~~TLAIGD-GANDVsM-IQ~A---hVGVGI 819 (1151)
T KOG0206|consen 771 SVICCRVSPLQKALVVKLVKKGLK---------AVTLAIGD-GANDVSM-IQEA---HVGVGI 819 (1151)
T ss_pred EEEEccCCHHHHHHHHHHHHhcCC---------ceEEEeeC-CCccchh-eeeC---CcCeee
Confidence 345666666789999998844433 46899999 9999999 8754 455665
No 266
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=75.64 E-value=1.5 Score=43.94 Aligned_cols=31 Identities=0% Similarity=-0.175 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccc
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNL 806 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M 806 (856)
+...+.+++++++ .+++.+++||| ..+|.++
T Consensus 144 ~~~~~~~~~~~~~------~~~~~~v~IgD-~~~di~a 174 (185)
T TIGR02009 144 HPETFLLAAELLG------VSPNECVVFED-ALAGVQA 174 (185)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHH
Confidence 3456788889888 56899999999 9999777
No 267
>PHA02597 30.2 hypothetical protein; Provisional
Probab=74.51 E-value=1.5 Score=44.71 Aligned_cols=55 Identities=9% Similarity=0.048 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC--c-ceEEeCCC-------CccccCCHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT--I-STVRLDSS-------FLHYLRMKMCMR 835 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~--~-~~v~V~~~-------~~~~l~~~~~~~ 835 (856)
.|-..+..++++++ ++.+++||| ..+|... +... | -+|.|... ..|++.++.++.
T Consensus 131 ~kp~~~~~a~~~~~--------~~~~v~vgD-s~~di~a----A~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 131 SKEKLFIKAKEKYG--------DRVVCFVDD-LAHNLDA----AHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred ccHHHHHHHHHHhC--------CCcEEEeCC-CHHHHHH----HHHHHcCCcEEEecchhhccccchhhhhccHHHHh
Confidence 36678888888876 467999999 8888544 4444 4 35555322 127777776653
No 268
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=74.17 E-value=1.3e+02 Score=37.29 Aligned_cols=137 Identities=16% Similarity=0.217 Sum_probs=92.5
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCc-CccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS-DWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P-~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
+..+++++=|++.-|-....+.=..++...-- ++..+|.++..|-...++.. -..+-..+...+..+|.+ -.
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~-aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYA-AKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchH-HHHHHHHHHHHHHhhccc------ce
Confidence 35688899999999987776665555544322 45556766655544433332 245667778888888763 25
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC--cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEECC
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNP 511 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~--EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVnP 511 (856)
|+|+.. .+-.--..++.+|||-..+|++ |.=|..-+=|+. .|++-+|..-|+--++ |.+|+++-.
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~al-----NGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAAL-----NGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCCCCccccCcCcchHHh-----cCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 787654 3445556678999999999874 666665555555 3888899999988665 468888854
No 269
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.99 E-value=1.5 Score=44.84 Aligned_cols=31 Identities=3% Similarity=-0.124 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccc
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNL 806 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M 806 (856)
+-..+..+++.++ .+++++++||| ..+|+.+
T Consensus 163 ~p~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~a 193 (197)
T TIGR01548 163 NPEPLILAAKALG------VEACHAAMVGD-TVDDIIT 193 (197)
T ss_pred CHHHHHHHHHHhC------cCcccEEEEeC-CHHHHHH
Confidence 4566788888888 56789999999 9888765
No 270
>PRK11590 hypothetical protein; Provisional
Probab=73.91 E-value=1.8 Score=45.04 Aligned_cols=47 Identities=19% Similarity=0.164 Sum_probs=31.8
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
..|-.|-..++..+ + .+.+...|.|| +.+|.+| ++.+ +..+.|.++.
T Consensus 159 c~g~~K~~~l~~~~---~------~~~~~~~aY~D-s~~D~pm-L~~a---~~~~~vnp~~ 205 (211)
T PRK11590 159 CLGHEKVAQLERKI---G------TPLRLYSGYSD-SKQDNPL-LYFC---QHRWRVTPRG 205 (211)
T ss_pred CCChHHHHHHHHHh---C------CCcceEEEecC-CcccHHH-HHhC---CCCEEECccH
Confidence 34455655555443 4 23566799999 9999999 8877 4566676653
No 271
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=73.67 E-value=19 Score=46.08 Aligned_cols=40 Identities=5% Similarity=0.295 Sum_probs=34.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
++-+++.++|++|.+ .|++|+++||..........+.+++
T Consensus 537 plr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 537 PPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHcCC
Confidence 467899999999985 7999999999999999888887764
No 272
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=73.48 E-value=3.4 Score=42.74 Aligned_cols=42 Identities=12% Similarity=0.018 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCc-ceEEeC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTI-STVRLD 821 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~-~~v~V~ 821 (856)
+......++++++ .+++.+++||| +. +|+.+ ++..| .+|.|.
T Consensus 152 ~~~~~~~~~~~~~------~~~~~~~~igD-s~~~di~~----A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLG------VKPEEAVMVGD-RLDKDIKG----AKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-ChHHHHHH----HHHCCCEEEEEC
Confidence 4467888999998 56789999999 86 88766 55444 356664
No 273
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=73.48 E-value=2 Score=45.52 Aligned_cols=43 Identities=7% Similarity=0.048 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccccCc-ceEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLMQTI-STVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~~~~-~~v~V~~ 822 (856)
+......++++++ .++++++.||| + ..|+.. ++..| .+|.|..
T Consensus 165 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~----A~~aG~~~i~v~~ 209 (238)
T PRK10748 165 FSDMYHLAAEKLN------VPIGEILHVGD-DLTTDVAG----AIRCGMQACWINP 209 (238)
T ss_pred cHHHHHHHHHHcC------CChhHEEEEcC-CcHHHHHH----HHHCCCeEEEEcC
Confidence 4667788888888 56899999999 7 477555 55544 4666743
No 274
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=73.32 E-value=90 Score=39.01 Aligned_cols=150 Identities=12% Similarity=0.120 Sum_probs=100.0
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHH--HhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l--~~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|-|++.-|--.. +|.-+.++. ..+|+.. ..+++|..|-...++.. -+.+-+.|..++..||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccChhcCC
Confidence 5567888999999998777 666655553 3456421 23566656554444432 34566778888888887421223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lVn 510 (856)
.-.|+|+.. ..-.--..++.+|||-.-.|+ .|.=|..-+=||.- |++.+|..-|+--++ | ++++++-
T Consensus 608 ~lkVVFlen-Y~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLPN-YNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeCC-CChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhc-----CceeeecccchhHHHHHHhCcCcEEEeC
Confidence 335887654 455556678999999999887 47777777777664 889999988887665 4 5788884
Q ss_pred CCCHHHHHH
Q 003029 511 PWNITEVAN 519 (856)
Q Consensus 511 P~d~~~lA~ 519 (856)
.+.+++.+
T Consensus 682 -~~~~ev~~ 689 (797)
T cd04300 682 -LTAEEVEA 689 (797)
T ss_pred -CCHHHHHH
Confidence 45666654
No 275
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=72.62 E-value=2 Score=45.78 Aligned_cols=42 Identities=12% Similarity=-0.110 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCcCCcCCC-CcceEEEEecCCcccccccccccccCc-ceEEeC
Q 003029 769 KGAAIDRILAEIVHSKKMKT-AIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLD 821 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~-~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~ 821 (856)
+-..+.+.+++++ . +++++++||| +.+|+.+ +...| .+|.|.
T Consensus 158 ~p~~~~~a~~~l~------~~~~~~~l~IGD-s~~Di~a----A~~aGi~~i~v~ 201 (253)
T TIGR01422 158 APWMALKNAIELG------VYDVAACVKVGD-TVPDIEE----GRNAGMWTVGLI 201 (253)
T ss_pred CHHHHHHHHHHcC------CCCchheEEECC-cHHHHHH----HHHCCCeEEEEe
Confidence 3466788888888 4 3789999999 9888666 44443 456663
No 276
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=72.46 E-value=1.4e+02 Score=35.66 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=76.8
Q ss_pred EEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC
Q 003029 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (856)
Q Consensus 366 Il~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~ 445 (856)
++|..==-+.|=.++.+.-.-++++.-|+- +|++.+++ +. .+....+++++++- |. +...++| .
T Consensus 431 vVf~c~~n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~---~~~~~~l~~la~~~----Gv-~~eRL~f-~ 494 (620)
T COG3914 431 VVFCCFNNYFKITPEVFALWMQILSAVPNS----VLLLKAGG---DD---AEINARLRDLAERE----GV-DSERLRF-L 494 (620)
T ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---Cc---HHHHHHHHHHHHHc----CC-Chhheee-c
Confidence 333333347788899999999999999984 36555543 22 23455666666553 32 2334664 7
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCC
Q 003029 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (856)
Q Consensus 446 g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a 496 (856)
...+.++-.+-|+.||+++-|=-|-| ..++.|++-+ |++|++-.+
T Consensus 495 p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 495 PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 78888999999999999998877766 5789999998 677777543
No 277
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=71.73 E-value=14 Score=37.22 Aligned_cols=49 Identities=20% Similarity=0.085 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHhcC---CCCEEEEeCccchhHHHHHHhcCCCCeEEEE
Q 003029 211 FAAYIKANQMFADVVNKHYK---DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 261 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~~---~~DvIwvHDyhl~llp~~lr~~~~~~~i~~f 261 (856)
|+.=...-+..++++.++-+ .+|+|..| +-+.-+-+||+..|++++..+
T Consensus 43 ~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 43 FEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 44444444555555555544 46999999 888888899999999997643
No 278
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=70.90 E-value=4.5 Score=42.49 Aligned_cols=15 Identities=20% Similarity=0.496 Sum_probs=13.4
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|.|+||+||||+++
T Consensus 12 ~k~viFD~DGTL~Ds 26 (229)
T PRK13226 12 PRAVLFDLDGTLLDS 26 (229)
T ss_pred CCEEEEcCcCccccC
Confidence 468999999999987
No 279
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=70.73 E-value=2.2 Score=45.93 Aligned_cols=64 Identities=6% Similarity=-0.184 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhCcCCcCCC-CcceEEEEecCCcccccccccccccCc-ceEEeCCC-----------------------
Q 003029 769 KGAAIDRILAEIVHSKKMKT-AIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSS----------------------- 823 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~-~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~----------------------- 823 (856)
+-..+..++++++ + +++++++||| +.+|+.+ +...| .+|.|...
T Consensus 160 ~p~~~~~a~~~l~------~~~~~e~l~IGD-s~~Di~a----A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T PRK13478 160 YPWMALKNAIELG------VYDVAACVKVDD-TVPGIEE----GLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARR 228 (267)
T ss_pred ChHHHHHHHHHcC------CCCCcceEEEcC-cHHHHHH----HHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHH
Confidence 3566788888988 4 3688999999 9999766 44443 34555321
Q ss_pred -----------CccccCCHHHHHHHHHHHHH
Q 003029 824 -----------FLHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 824 -----------~~~~l~~~~~~~~~l~~~~~ 843 (856)
+.+-+.++.++..+|+.+.+
T Consensus 229 ~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 229 ERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 11677888888888865544
No 280
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=70.71 E-value=2.5 Score=43.69 Aligned_cols=58 Identities=12% Similarity=-0.030 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHh-CcCCcCCCCcceEEEEecCCc-ccccccccccccCcc-eEEeCCC---------CccccCCHHHHHH
Q 003029 769 KGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTIS-TVRLDSS---------FLHYLRMKMCMRF 836 (856)
Q Consensus 769 KG~av~~ll~~l-~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~-~v~V~~~---------~~~~l~~~~~~~~ 836 (856)
+.....++++++ + ++++++++||| +. +|+.. +...|+ +|.+... +.|.+.++.++..
T Consensus 154 ~~~~~~~~~~~~~~------~~~~~~v~igD-~~~~di~~----A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 154 DKEIFNYALERMPK------FSKEEVLMIGD-SLTADIKG----GQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred CHHHHHHHHHHhcC------CCchheEEECC-CcHHHHHH----HHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 456788888988 7 56889999999 86 68666 544443 4455321 1266777777655
Q ss_pred H
Q 003029 837 L 837 (856)
Q Consensus 837 ~ 837 (856)
+
T Consensus 223 ~ 223 (224)
T TIGR02254 223 I 223 (224)
T ss_pred h
Confidence 4
No 281
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=70.20 E-value=18 Score=39.33 Aligned_cols=40 Identities=15% Similarity=0.256 Sum_probs=33.5
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
..+.|-+.+.|..|.+ .|+.++|+||-....++..++.++
T Consensus 120 l~l~pG~~efl~~L~~-~GIpv~IvS~G~~~~Ie~vL~~lg 159 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQ-HSIPVFIFSAGIGNVLEEVLRQAG 159 (277)
T ss_pred CccCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHHcC
Confidence 4567778888999875 699999999999999998888764
No 282
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=69.81 E-value=2.6 Score=43.75 Aligned_cols=42 Identities=2% Similarity=-0.027 Sum_probs=31.8
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcce-EEe
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIST-VRL 820 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~-v~V 820 (856)
-+......++++++ ++++.++.||| +.+|++. +...|+. |.+
T Consensus 143 P~p~~~~~a~~~~~------~~p~~~l~igD-s~~di~a----A~~aG~~~i~~ 185 (221)
T PRK10563 143 PDPALMFHAAEAMN------VNVENCILVDD-SSAGAQS----GIAAGMEVFYF 185 (221)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHH----HHHCCCEEEEE
Confidence 35788899999998 56899999999 8888655 5555544 345
No 283
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=68.35 E-value=9.2 Score=38.73 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=28.9
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.++.|..++.++.+.+ +++.|+|+||-....+..+|..+
T Consensus 72 i~Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 72 IKIDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cccCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhh
Confidence 4566666666666654 68888888888888888888775
No 284
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=66.72 E-value=3.9 Score=40.93 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=0.0
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK 639 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g 639 (856)
+|+||+||||++. .+....+++++++.-|
T Consensus 1 ~iiFD~DGTL~ds------------------~~~~~~~~~~~~~~~g 29 (185)
T TIGR01990 1 AVIFDLDGVITDT------------------AEYHYLAWKALADELG 29 (185)
T ss_pred CeEEcCCCccccC------------------hHHHHHHHHHHHHHcC
No 285
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=66.54 E-value=9.2 Score=43.52 Aligned_cols=72 Identities=11% Similarity=0.074 Sum_probs=53.6
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c---CCeEE-EC-----C-CCHHHH
Q 003029 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G---AGAIL-VN-----P-WNITEV 517 (856)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g---~~g~l-Vn-----P-~d~~~l 517 (856)
++-.+-+.|.+.|+||+||..|.++.|...+ |-|-|.+..+|....+ . .-|+. |+ | .+++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVM----GiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEe----ccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 4566789999999999999999999999888 4788888888766544 1 12544 32 2 356778
Q ss_pred HHHHHHHHcC
Q 003029 518 ANAIARALNM 527 (856)
Q Consensus 518 A~ai~~aL~~ 527 (856)
++-|......
T Consensus 569 ~~~m~~F~~q 578 (692)
T KOG3742|consen 569 ASFMYEFCKQ 578 (692)
T ss_pred HHHHHHHHHH
Confidence 8877777653
No 286
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=65.57 E-value=8.9 Score=39.73 Aligned_cols=44 Identities=9% Similarity=0.067 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..-.|...++.+ +..+ ..++++|| +.||.+| ++.+ +..|.+...
T Consensus 129 ~~~~K~~~l~~l-~~~~---------~~~v~vGD-s~nDl~m-l~~A---g~~ia~~ak 172 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLY---------YRVIAAGD-SYNDTTM-LSEA---HAGILFHAP 172 (203)
T ss_pred CcchHHHHHHHH-HhhC---------CCEEEEeC-CHHHHHH-HHhC---CCCEEecCC
Confidence 345799988877 4544 26999999 9999999 7765 666766544
No 287
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=64.46 E-value=6.3 Score=37.72 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=41.2
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+.++++|+..- .++=+++.+.|++|.+ - ..|+|+||-.+.++.......+
T Consensus 17 ~~~~v~~tiatg---------------Gklf~ev~e~iqeL~d-~-V~i~IASgDr~gsl~~lae~~g 67 (152)
T COG4087 17 KAGKVLYTIATG---------------GKLFSEVSETIQELHD-M-VDIYIASGDRKGSLVQLAEFVG 67 (152)
T ss_pred ecceEEEEEccC---------------cEEcHhhHHHHHHHHH-h-heEEEecCCcchHHHHHHHHcC
Confidence 356889999875 3466789999999985 3 9999999999999988776644
No 288
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=64.32 E-value=10 Score=36.40 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=35.1
Q ss_pred CCcceEEEEecCCcccccccccccccCcceEEeCC---C---Cc-cccCCHHHHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---S---FL-HYLRMKMCMRFLSQN 840 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---~---~~-~~l~~~~~~~~~l~~ 840 (856)
.+.++++++|| +.||+-| ++.+.-.-.++.=++ . ++ +-+.++.++.+++..
T Consensus 91 k~~~k~vmVGn-GaND~la-Lr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 91 KRYEKVVMVGN-GANDILA-LREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred CCCcEEEEecC-CcchHHH-hhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 35789999999 9999999 776633223333222 1 23 778888888888754
No 289
>PRK09449 dUMP phosphatase; Provisional
Probab=63.88 E-value=3.6 Score=42.81 Aligned_cols=60 Identities=15% Similarity=-0.039 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcc-eEEeCCC---------CccccCCHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTIS-TVRLDSS---------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~-~v~V~~~---------~~~~l~~~~~~~~~l 838 (856)
-....++++++|. .+.+.++.||| +. +|+.. +...|+ +|.|... +.|.+.++.++..+|
T Consensus 153 p~~~~~~~~~~~~-----~~~~~~~~vgD-~~~~Di~~----A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGN-----PDRSRVLMVGD-NLHSDILG----GINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCC-----CCcccEEEEcC-CcHHHHHH----HHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 4567888999872 14578999999 86 68666 555554 5666421 127788888887766
Q ss_pred H
Q 003029 839 Q 839 (856)
Q Consensus 839 ~ 839 (856)
+
T Consensus 223 ~ 223 (224)
T PRK09449 223 C 223 (224)
T ss_pred h
Confidence 4
No 290
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=63.48 E-value=7.7 Score=41.18 Aligned_cols=39 Identities=13% Similarity=0.338 Sum_probs=26.5
Q ss_pred CChhHHHHHHHhhc-CCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 623 LHPDLKQPLNALCH-DPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 623 ~s~~~~~~L~~L~~-d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
+.|.++++|+.|.+ ..+..++|+|--.--.++.+++..+
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~g 111 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHG 111 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCC
Confidence 45667777777742 3477777777777777777776654
No 291
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=63.41 E-value=4.2 Score=40.96 Aligned_cols=37 Identities=11% Similarity=0.015 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS 816 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~ 816 (856)
+-....++++++| .+++++++||| ...|+.. +...|+
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~l~vgD-~~~di~a----A~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREAG------VDPERAIFFDD-SARNIAA----AKALGM 179 (184)
T ss_pred CHHHHHHHHHHhC------CCccceEEEeC-CHHHHHH----HHHcCC
Confidence 4467888999998 56889999999 8777544 555554
No 292
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=62.05 E-value=1.2e+02 Score=37.92 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=99.3
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHH--HhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l--~~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.+-|++.-|--.. +|..+.++. ..+|+.. ..+++|..|-...++. .-+.+-+.|..++..||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHHHHHhccChhhCC
Confidence 4567788999999998777 666655553 3456431 1356666665444443 234566778888888877321122
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..++.+|||..-.|+ .|.=|..-+=||.- |++-+|..-|+-.++ | ++++++-
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnMK~alN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc-----CcceeecccchhHHHHHHhCcccEEEcC
Confidence 33588765 4455666778999999999887 47777777777664 889999988887665 3 5777774
Q ss_pred CCCHHHHHH
Q 003029 511 PWNITEVAN 519 (856)
Q Consensus 511 P~d~~~lA~ 519 (856)
.+.+++.+
T Consensus 679 -~~~~ev~~ 686 (794)
T TIGR02093 679 -LTVEEVEA 686 (794)
T ss_pred -CCHHHHHH
Confidence 46666654
No 293
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=61.82 E-value=39 Score=32.97 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 380 ~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
.-+.++..+++++ ++..|.||-|-..++.++. ..+.+++.+.++..+|+ .||++.....+-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455666666664 3668889999877766655 66788999999999987 389988777776666665555
Q ss_pred cc
Q 003029 460 TD 461 (856)
Q Consensus 460 AD 461 (856)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 44
No 294
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=60.51 E-value=1.2e+02 Score=38.03 Aligned_cols=150 Identities=14% Similarity=0.097 Sum_probs=98.5
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHH--HhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l--~~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++++-|++.-|--.. +|....++. ..+|+.. ..+++|..|-...++. .-+.+-+.|..++..||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhcCChhhCC
Confidence 4456778999999998777 666655553 3456522 2356666655444442 234566778888888875311112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVn 510 (856)
.-.|+|+. ..+-.--..++.+|||..-+|+ .|.=|..-+=||.- |++-+|..-|+--++ +++++++-
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amN-----GaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhc-----CceeeecccchHHHHHHHhCcCcEEEeC
Confidence 33588755 4455666778999999999887 47777776777664 899999999986554 36788885
Q ss_pred CCCHHHHHH
Q 003029 511 PWNITEVAN 519 (856)
Q Consensus 511 P~d~~~lA~ 519 (856)
. +.+++.+
T Consensus 681 ~-~~~ev~~ 688 (798)
T PRK14985 681 H-TVEQVKA 688 (798)
T ss_pred C-CHHHHHH
Confidence 4 4555544
No 295
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=59.25 E-value=2.9e+02 Score=30.70 Aligned_cols=193 Identities=16% Similarity=0.158 Sum_probs=103.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCC-CeEEEEEecC-CCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSD-MKVGWFLHTP-FPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~-~~i~~flH~P-fP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+|.--.-+.......+|+.... .+.++-. .| .| .. ..|+|.--.++
T Consensus 57 ~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~-~P~~~-~~----------------~FDlvi~p~HD----------- 107 (311)
T PF06258_consen 57 WPDLIISAGRRTAPAALALRRASGGRTKTVQIM-DPRLP-PR----------------PFDLVIVPEHD----------- 107 (311)
T ss_pred CCcEEEECCCchHHHHHHHHHHcCCCceEEEEc-CCCCC-cc----------------ccCEEEECccc-----------
Confidence 3688888777777788888887654 3444322 23 22 11 34665532211
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeec----ccccCC-hHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR----LDMIKG-IPQ 380 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~R----ld~~KG-i~~ 380 (856)
++.. +.........|+.|+++.+.... ..+..++ +...+.+-||- ...... ...
T Consensus 108 --~~~~-------~~Nvl~t~ga~~~i~~~~l~~a~---------~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~ 169 (311)
T PF06258_consen 108 --RLPR-------GPNVLPTLGAPNRITPERLAEAA---------AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAER 169 (311)
T ss_pred --CcCC-------CCceEecccCCCcCCHHHHHHHH---------HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHH
Confidence 1100 11122333457888888776432 2222223 34556666663 222221 225
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
++..+..+.+.++ ..++ |...-|+. + +..+.+.++.+. ...+.++. .-+..=+.+++..|
T Consensus 170 l~~~l~~~~~~~~-----~~~~-vttSRRTp-~---~~~~~L~~~~~~---------~~~~~~~~-~~~~nPy~~~La~a 229 (311)
T PF06258_consen 170 LLDQLAALAAAYG-----GSLL-VTTSRRTP-P---EAEAALRELLKD---------NPGVYIWD-GTGENPYLGFLAAA 229 (311)
T ss_pred HHHHHHHHHHhCC-----CeEE-EEcCCCCc-H---HHHHHHHHhhcC---------CCceEEec-CCCCCcHHHHHHhC
Confidence 6677777777765 2243 33333443 2 233344443221 11243443 33445588999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG 497 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG 497 (856)
|.+++|. |..++ +.||++++ .||.+-+..+
T Consensus 230 d~i~VT~--DSvSM-vsEA~~tG----~pV~v~~l~~ 259 (311)
T PF06258_consen 230 DAIVVTE--DSVSM-VSEAAATG----KPVYVLPLPG 259 (311)
T ss_pred CEEEEcC--ccHHH-HHHHHHcC----CCEEEecCCC
Confidence 9999997 66666 57999984 6676666655
No 296
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=59.02 E-value=5.3 Score=40.67 Aligned_cols=42 Identities=12% Similarity=-0.043 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLD 821 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~ 821 (856)
+.....+++++++ ++++.++.||| +.+|... +...| -+|.|.
T Consensus 150 ~~~~~~~~~~~~~------~~p~~~~~vgD-~~~Di~~----A~~~G~~~i~v~ 192 (198)
T TIGR01428 150 APQVYQLALEALG------VPPDEVLFVAS-NPWDLGG----AKKFGFKTAWVN 192 (198)
T ss_pred CHHHHHHHHHHhC------CChhhEEEEeC-CHHHHHH----HHHCCCcEEEec
Confidence 3567888999998 56899999999 8888666 44444 356664
No 297
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.91 E-value=23 Score=40.99 Aligned_cols=83 Identities=16% Similarity=0.173 Sum_probs=58.5
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCC-CCCCCCCccc-cccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHH
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPV-DTPGRRGDQI-REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~-~~p~~~~~~~-~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (856)
++.+++.+-....+|.++||+|+||..-. .+-|..+=++ +.....+-.+..+.+..|.+ +|...+|||-.....+++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 56677888888889999999999998632 1111111111 11122344577788999985 799999999999999999
Q ss_pred HhcccC
Q 003029 656 NFQEYN 661 (856)
Q Consensus 656 ~~~~l~ 661 (856)
.|..-+
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 887743
No 298
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=58.36 E-value=8.2 Score=39.57 Aligned_cols=59 Identities=8% Similarity=-0.107 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEe--CCC---------CccccCCHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRL--DSS---------FLHYLRMKMCMRFL 837 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V--~~~---------~~~~l~~~~~~~~~ 837 (856)
+-.++.+++++++ .+++++++||| +.+|..+ -+.++- -+|.| +.. +.|.+.++.++..+
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~~~igD-s~~d~~a-a~~aG~--~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 143 HPDPLLLAAERLG------VAPQQMVYVGD-SRVDIQA-ARAAGC--PSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ChHHHHHHHHHcC------CChhHeEEeCC-CHHHHHH-HHHCCC--eEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 4678899999998 56889999999 9999888 555543 23344 221 12777777776543
No 299
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=58.06 E-value=22 Score=37.22 Aligned_cols=78 Identities=10% Similarity=0.009 Sum_probs=48.1
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC-------cceEEeCCCCc---c--cc--
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT-------ISTVRLDSSFL---H--YL-- 828 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~-------~~~v~V~~~~~---~--~l-- 828 (856)
-|++.=||..++++....-. ..+..+.++++|| +.||.-- ...++.. ++.+.-.-+++ + .+
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~---~gv~yer~iYvGD-G~nD~CP-~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~ 232 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLK---DGVRYERLIYVGD-GANDFCP-VLRLRACDVAMPRKGFPLWKLISANPMLLKASVLE 232 (256)
T ss_pred CchhhhhhHHHHHHHHHHhh---cCCceeeEEEEcC-CCCCcCc-chhcccCceecccCCCchHhhhhcCcceeeeeEEe
Confidence 68899999999998876521 1256889999999 9999754 3333322 33333211111 2 11
Q ss_pred -CCHHHHHHHHHHHHHHH
Q 003029 829 -RMKMCMRFLSQNYLMMA 845 (856)
Q Consensus 829 -~~~~~~~~~l~~~~~~~ 845 (856)
.+-.+|...|+.++...
T Consensus 233 W~sg~d~~~~L~~lik~~ 250 (256)
T KOG3120|consen 233 WSSGEDLERILQQLIKTI 250 (256)
T ss_pred cccHHHHHHHHHHHHHHh
Confidence 34567777777775543
No 300
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=57.74 E-value=5.7 Score=40.85 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCCCccccCCHHHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSSFLHYLRMKMCMRFLSQNY 841 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~~~~~l~~~~~~~~~l~~~ 841 (856)
......+++++| .+++.++.||| ...|+.+ ++..|+ +|.|.. +.+...-|+++
T Consensus 155 p~~~~~~~~~~g------~~~~~~l~i~D-~~~di~a----A~~aG~~~i~v~~--------~~~~~~~l~~~ 208 (211)
T TIGR02247 155 PRIYQLMLERLG------VAPEECVFLDD-LGSNLKP----AAALGITTIKVSD--------EEQAIHDLEKA 208 (211)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH----HHHcCCEEEEECC--------HHHHHHHHHHH
Confidence 557788899998 56899999999 8888666 555543 555543 44455555544
No 301
>COG4996 Predicted phosphatase [General function prediction only]
Probab=57.43 E-value=28 Score=33.34 Aligned_cols=69 Identities=19% Similarity=0.224 Sum_probs=43.9
Q ss_pred eEEEEecCCccCCCCCCCC-----CCCc-----cccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 592 RLLILGFNATLTEPVDTPG-----RRGD-----QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~-----~~~~-----~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
++|+||.||||.+..+... .+-+ .++.....+-+.+++.|+.+.+ .|..+-.+|=......-+.+..++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~kA~~aLral~ 79 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDKAIKALRALD 79 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHHHHHHHHHhc
Confidence 5799999999998754211 0100 0111223456788899999875 788888888776665555555554
No 302
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=56.47 E-value=10 Score=39.14 Aligned_cols=16 Identities=13% Similarity=0.320 Sum_probs=14.4
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 2 ~~~~viFD~DGTL~ds 17 (214)
T PRK13288 2 KINTVLFDLDGTLINT 17 (214)
T ss_pred CccEEEEeCCCcCccC
Confidence 4689999999999987
No 303
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=56.42 E-value=12 Score=40.80 Aligned_cols=67 Identities=16% Similarity=0.070 Sum_probs=44.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCcccc---ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh----HHHHhcc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIR---EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV----LDKNFQE 659 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~---~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~----l~~~~~~ 659 (856)
--|+.|+|-||+......|.+..+.+ +....++++.++-+++|.+ +-..+=+-+..+.++ |.+|...
T Consensus 23 lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~-~Y~PiE~d~~~~~~eK~~~m~eWw~k 96 (277)
T TIGR01544 23 LQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKE-KYYPIEVDPVLTVEEKYPYMVEWWTK 96 (277)
T ss_pred eEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHh-hccceecCCCCChHHhhhHHHHHHHH
Confidence 34999999999988644443332222 2335678899999999985 566677776777665 4444444
No 304
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=56.17 E-value=5.1 Score=39.79 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccc
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNL 806 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M 806 (856)
-.....+++++| .++++++.||| ...|+..
T Consensus 142 p~~f~~~~~~~~------~~p~~~l~vgD-~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVG------LPPDRVLMVAA-HQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHC------CCHHHeEeEec-ChhhHHH
Confidence 455677888888 67899999999 8888665
No 305
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=53.14 E-value=33 Score=36.85 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=33.5
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccc-ccccccccccCc
Q 003029 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKN-CNLPLQFLMQTI 815 (856)
Q Consensus 762 V~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nD-e~M~f~~~~~~~ 815 (856)
+...|.+||.++..+++++| ..++.|+.+-| .... +.| =+++...+
T Consensus 156 lft~~~~KG~~L~~fL~~~~------~~pk~IIfIDD-~~~nl~sv-~~a~k~~~ 202 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKIN------QSPKKIIFIDD-NKENLKSV-EKACKKSG 202 (252)
T ss_pred EEeCCCccHHHHHHHHHHcC------CCCCeEEEEeC-CHHHHHHH-HHHHhhCC
Confidence 34568999999999999998 45788999999 5433 345 44555544
No 306
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=52.22 E-value=14 Score=36.78 Aligned_cols=38 Identities=13% Similarity=0.274 Sum_probs=28.2
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
+.+.+.+.|+.|.+ .|..++|+|+.....++..+..++
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 110 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIG 110 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcC
Confidence 33457778888765 578888888888888877777654
No 307
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=51.63 E-value=17 Score=37.09 Aligned_cols=59 Identities=12% Similarity=0.027 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEe--CCC--------Cc-cccCCHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRL--DSS--------FL-HYLRMKMCMRF 836 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V--~~~--------~~-~~l~~~~~~~~ 836 (856)
|...+..++++++ ++++.+++||| +.+|+.+ +...|+ +|.| +.. .+ |-+.++.++..
T Consensus 133 ~~~~~~~~~~~~~------~~~~~~l~igD-~~~Di~a----A~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 133 APDIVREALRLLD------VPPEDAVMVGD-AVTDLAS----ARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred ChHHHHHHHHHcC------CChhheEEEcC-CHHHHHH----HHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 5678888999988 56889999999 9898777 444443 3333 221 12 77777877765
Q ss_pred HH
Q 003029 837 LS 838 (856)
Q Consensus 837 ~l 838 (856)
++
T Consensus 202 ~~ 203 (205)
T TIGR01454 202 LC 203 (205)
T ss_pred Hh
Confidence 54
No 308
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=51.09 E-value=1.8e+02 Score=30.42 Aligned_cols=47 Identities=34% Similarity=0.382 Sum_probs=28.9
Q ss_pred ceEEEeCCCCchhhccCC----eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003029 488 GVLILSEFAGAAQSLGAG----AILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (856)
Q Consensus 488 g~lVlSe~aG~~~~lg~~----g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~ 538 (856)
.|++.-|-+|++--+|.+ .+=|+|.+-.++|.||+--+ +|.++|.++
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~ 236 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQER 236 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHH
Confidence 677777766655544222 34678887779999887544 344445443
No 309
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=49.96 E-value=47 Score=36.69 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=49.3
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhh------c-c-CCeEEECCCCHHHH
Q 003029 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS------L-G-AGAILVNPWNITEV 517 (856)
Q Consensus 446 g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~------l-g-~~g~lVnP~d~~~l 517 (856)
+..+ +++.++|..||+++..+ |++ ++.|+++++ .|+|+....|-.++ + . ..|+.++..+. ++
T Consensus 235 ~~~~-~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g----~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~ 304 (321)
T TIGR00661 235 RITT-DNFKELIKNAELVITHG---GFS-LISEALSLG----KPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RL 304 (321)
T ss_pred ECCh-HHHHHHHHhCCEEEECC---ChH-HHHHHHHcC----CCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HH
Confidence 4444 78999999999999876 554 588999995 78887777664443 2 1 23677766666 44
Q ss_pred HHHHHHHHcCC
Q 003029 518 ANAIARALNMS 528 (856)
Q Consensus 518 A~ai~~aL~~~ 528 (856)
.+++...++++
T Consensus 305 ~~~~~~~~~~~ 315 (321)
T TIGR00661 305 LEAILDIRNMK 315 (321)
T ss_pred HHHHHhccccc
Confidence 55555555443
No 310
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=48.97 E-value=3.6e+02 Score=31.08 Aligned_cols=99 Identities=12% Similarity=0.089 Sum_probs=60.7
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCC-------CchhhccCCeEEE--CCCCH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-------GAAQSLGAGAILV--NPWNI 514 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a-------G~~~~lg~~g~lV--nP~d~ 514 (856)
....+++.+ ++..||+++.. -|+|. ..|++..+ .|+|+=-.. ...+.+|. |+.+ .+.+.
T Consensus 288 v~~~~p~~~---~l~~ad~vI~h---GG~gt-t~eaL~~g----vP~vv~P~~~DQ~~nA~rve~~G~-G~~l~~~~l~~ 355 (406)
T COG1819 288 VADYVPQLE---LLPRADAVIHH---GGAGT-TSEALYAG----VPLVVIPDGADQPLNAERVEELGA-GIALPFEELTE 355 (406)
T ss_pred EecCCCHHH---HhhhcCEEEec---CCcch-HHHHHHcC----CCEEEecCCcchhHHHHHHHHcCC-ceecCcccCCH
Confidence 356777665 78899999976 57776 57898883 444433221 11122233 4444 47999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (856)
+.++++|.++|+++. -+++.+++.+....++...=+...|
T Consensus 356 ~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~l 395 (406)
T COG1819 356 ERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLL 395 (406)
T ss_pred HHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHH
Confidence 999999999998643 3344445555555555444333333
No 311
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=48.91 E-value=26 Score=42.23 Aligned_cols=63 Identities=21% Similarity=0.338 Sum_probs=50.9
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+...+.++++.||+++..-. ....+-|.+.++|++|.+ .|+.++|+||......+...+.+++
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~-----------~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA-----------LEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE-----------ecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 34568899999999875421 134577899999999986 6999999999999999999988776
No 312
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=48.10 E-value=1.8e+02 Score=31.60 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=34.1
Q ss_pred cEEEeCCC-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc
Q 003029 440 PIHHLDRS-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA 498 (856)
Q Consensus 440 pV~~~~g~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~ 498 (856)
|+.|..+. -+..=+.+++.+||.++.|. |..|+ +-||.+.+ .||.+-+-.+.
T Consensus 224 ~~i~w~~~d~g~NPY~~~La~Adyii~Ta--DSinM-~sEAasTg----kPv~~~~~~~~ 276 (329)
T COG3660 224 PGIVWNNEDTGYNPYIDMLAAADYIISTA--DSINM-CSEAASTG----KPVFILEPPNF 276 (329)
T ss_pred ceeEeCCCCCCCCchHHHHhhcceEEEec--chhhh-hHHHhccC----CCeEEEecCCc
Confidence 45544432 23345788899999988775 55555 56888874 67777666665
No 313
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=47.89 E-value=11 Score=39.11 Aligned_cols=17 Identities=12% Similarity=0.229 Sum_probs=0.0
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+..|.|+||+||||++.
T Consensus 2 ~~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 2 MMIKAILFDLDGTLLDF 18 (229)
T ss_pred CceeEEEEecCCccccc
No 314
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=47.64 E-value=11 Score=42.71 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=44.6
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
.+.+++++|+|||++.... -|+..+-+- .---+--+.+.-.++.+ +|..|.-.|.|++..+...-.- +..|++|
T Consensus 373 ~n~kiVVsDiDGTITkSD~-~Ghv~~miG--kdwth~gVAkLYtdI~r-NGYkI~YltsR~~Gqa~sTrsy--lrnieQn 446 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDA-LGHVKQMIG--KDWTHNGVAKLYTDIDR-NGYKIKYLTSRSYGQADSTRSY--LRNIEQN 446 (580)
T ss_pred CCCcEEEEecCCcEEehhh-HHHHHHHhc--cchhhcchhhhhhhhcc-CceEEEEEecccccchhhhhhH--HHhhhhc
Confidence 5788999999999997621 111000000 00012234444455553 5889999999998776533222 3455666
Q ss_pred ceEEE
Q 003029 669 GMFLR 673 (856)
Q Consensus 669 G~~i~ 673 (856)
|+.+-
T Consensus 447 gykLp 451 (580)
T COG5083 447 GYKLP 451 (580)
T ss_pred CccCC
Confidence 66543
No 315
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=46.89 E-value=13 Score=38.58 Aligned_cols=60 Identities=15% Similarity=0.030 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMR 835 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~ 835 (856)
|..|..+++.+.. ..+.++++|| +.||..| .+.+. + +.+.+. ..+...+..++.
T Consensus 142 g~~K~~~l~~~~~----------~~~~~i~iGD-g~~D~~~-a~~Ad---~-~~ar~~l~~~~~~~~~~~~~~~~f~di~ 205 (214)
T TIGR03333 142 GCCKPSLIRKLSE----------PNDYHIVIGD-SVTDVEA-AKQSD---L-CFARDYLLNECEELGLNHAPFQDFYDVR 205 (214)
T ss_pred CCCHHHHHHHHhh----------cCCcEEEEeC-CHHHHHH-HHhCC---e-eEehHHHHHHHHHcCCCccCcCCHHHHH
Confidence 3568888876532 2567999999 9999999 66553 2 333221 225568888888
Q ss_pred HHHHHH
Q 003029 836 FLSQNY 841 (856)
Q Consensus 836 ~~l~~~ 841 (856)
..|++.
T Consensus 206 ~~l~~~ 211 (214)
T TIGR03333 206 KELENV 211 (214)
T ss_pred HHHHHH
Confidence 877654
No 316
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=46.76 E-value=17 Score=40.86 Aligned_cols=55 Identities=13% Similarity=0.285 Sum_probs=35.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG 647 (856)
..|++.|||||||++... +.-...-+..-..+.++.-.-|++|.+ +|+.++|.|-
T Consensus 74 ~~K~i~FD~dgtlI~t~s--g~vf~~~~~dw~~l~~~vp~Klktl~~-~g~~l~iftn 128 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS--GKVFPKGSMDWRILFPEVPSKLKTLYQ-DGIKLFIFTN 128 (422)
T ss_pred CcceEEEecCCceeecCC--cceeeccCccceeeccccchhhhhhcc-CCeEEEEEec
Confidence 568899999999997642 100000000123456677778889986 6999999874
No 317
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=46.72 E-value=15 Score=31.23 Aligned_cols=40 Identities=8% Similarity=0.088 Sum_probs=29.7
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccccCc-ceEEeCC
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLMQTI-STVRLDS 822 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~~~~-~~v~V~~ 822 (856)
.+..++++++ ++++.+++||| . .+|+.+ ++..+ .+|.|..
T Consensus 9 ~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~----a~~~G~~~ilV~t 50 (75)
T PF13242_consen 9 MLEQALKRLG------VDPSRCVMVGD-SLETDIEA----AKAAGIDTILVLT 50 (75)
T ss_dssp HHHHHHHHHT------SGGGGEEEEES-STTTHHHH----HHHTTSEEEEESS
T ss_pred HHHHHHHHcC------CCHHHEEEEcC-CcHhHHHH----HHHcCCcEEEECC
Confidence 4667788887 56889999999 8 899877 44443 5677754
No 318
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=45.71 E-value=75 Score=37.89 Aligned_cols=82 Identities=20% Similarity=0.062 Sum_probs=59.7
Q ss_pred CCCCCHHHHHHHHHHccEEE-ECCCCcCCChhHHHHHhhcC---------C---------CCc---eEEEeCCCCchhhc
Q 003029 445 DRSLDFPALCALYAVTDVAL-VTSLRDGMNLVSYEFVACQD---------L---------KKG---VLILSEFAGAAQSL 502 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v-~~S~~EG~~Lv~lEama~~~---------~---------~~g---~lVlSe~aG~~~~l 502 (856)
+|.++..++..+++.|-||| +-.-+| |=.++||+|.|. . ++. -=+.|....+...+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 57889999999999999999 444467 457999999860 0 001 12344444433345
Q ss_pred c-CCeEEECCCCHHHHHHHHHHHHcCC
Q 003029 503 G-AGAILVNPWNITEVANAIARALNMS 528 (856)
Q Consensus 503 g-~~g~lVnP~d~~~lA~ai~~aL~~~ 528 (856)
| ..-+.|+-.|.+++-+||+++|+++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 5 4678899999999999999999875
No 319
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=44.94 E-value=12 Score=37.58 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=27.2
Q ss_pred CHHHHHHHH---HHHhCcCCcCCCCcceEEEEecCCccccccccc
Q 003029 768 TKGAAIDRI---LAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQ 809 (856)
Q Consensus 768 nKG~av~~l---l~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~ 809 (856)
+|..+++.+ ... + .+.+.++++|| +.||.+| ++
T Consensus 157 ~K~~~l~~~~~~~~~-~------~~~~~~~~iGD-s~~D~~~-lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-D------IDPDRVIAIGD-SINDLPM-LR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-T------HTCCEEEEEES-SGGGHHH-HH
T ss_pred cHHHHHHHHHHHhhc-C------CCCCeEEEEEC-CHHHHHH-hC
Confidence 699999999 443 3 34788999999 9999999 74
No 320
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=43.82 E-value=5e+02 Score=28.93 Aligned_cols=87 Identities=18% Similarity=0.239 Sum_probs=48.5
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
++.+++..|--.+.|.-+. ...++.+.+.+. .+ .++++|+|+. .+. ...+++++.++. .+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~----~vvl~ggp~e---~e~----~~~~~i~~~~~~-------~~ 243 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GY----EVVLTSGPDK---DDL----ACVNEIAQGCQT-------PP 243 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CC----eEEEEcCCCh---HHH----HHHHHHHHhcCC-------Cc
Confidence 4567777776567777552 333333333332 22 3455665431 111 112233322211 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECC
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTS 467 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S 467 (856)
+.-+.|..+-.++.++++.||++|-+-
T Consensus 244 ~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred cccccCCCCHHHHHHHHHhCCEEEecC
Confidence 444688899999999999999999764
No 321
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=43.79 E-value=27 Score=36.54 Aligned_cols=16 Identities=19% Similarity=0.356 Sum_probs=14.0
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 9 ~~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 9 DVDTVLLDMDGTLLDL 24 (224)
T ss_pred cCCEEEEcCCCCccch
Confidence 3688999999999985
No 322
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=43.51 E-value=3.3e+02 Score=30.58 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=47.3
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc---hhhc-------cCC-eEEECC--CCHHHH
Q 003029 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA---AQSL-------GAG-AILVNP--WNITEV 517 (856)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~---~~~l-------g~~-g~lVnP--~d~~~l 517 (856)
+++..+|+.||+++.-+ =+.+..|+++++ .|.|+--+... .++. ..+ |..+.. .+++.+
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g----~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l 315 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQ----KPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSL 315 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcC----CCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHH
Confidence 57889999999888653 257789999995 67666654321 1222 122 444433 357899
Q ss_pred HHHHHHHHcCC
Q 003029 518 ANAIARALNMS 528 (856)
Q Consensus 518 A~ai~~aL~~~ 528 (856)
+++|.++++++
T Consensus 316 ~~~l~~ll~~~ 326 (352)
T PRK12446 316 IKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHcCH
Confidence 99999998764
No 323
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=43.37 E-value=21 Score=37.12 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCCc
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSFL 825 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~~ 825 (856)
.|-.|-..++..+ + .+.+...|.|| +.+|.+| ++.+ +..+.|.++..
T Consensus 159 ~g~~Kv~rl~~~~---~------~~~~~~~aYsD-S~~D~pm-L~~a---~~~~~Vnp~~~ 205 (210)
T TIGR01545 159 LGHEKVAQLEQKI---G------SPLKLYSGYSD-SKQDNPL-LAFC---EHRWRVSKRGE 205 (210)
T ss_pred CChHHHHHHHHHh---C------CChhheEEecC-CcccHHH-HHhC---CCcEEECcchH
Confidence 4455666565544 3 13456789999 9999999 8877 56777777654
No 324
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=43.33 E-value=12 Score=38.01 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=27.0
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
.+..+++.++ .++..|+++|| +.||..| ++.+
T Consensus 183 ~~~~~i~~l~------~~~~~v~~vGD-g~nD~~a-l~~A 214 (215)
T PF00702_consen 183 IFLRIIKELQ------VKPGEVAMVGD-GVNDAPA-LKAA 214 (215)
T ss_dssp HHHHHHHHHT------CTGGGEEEEES-SGGHHHH-HHHS
T ss_pred hHHHHHHHHh------cCCCEEEEEcc-CHHHHHH-HHhC
Confidence 6678888887 45779999999 9999999 8765
No 325
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=42.98 E-value=41 Score=41.36 Aligned_cols=71 Identities=10% Similarity=0.164 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 580 ~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
....+.+.+...+.+++-+|++++--.. ..-.+-|++++++++|.+ .|++++++||...........+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHH
Confidence 3445566666778888888988775321 123467899999999986 7999999999999999999888
Q ss_pred cCc
Q 003029 660 YNL 662 (856)
Q Consensus 660 l~l 662 (856)
+++
T Consensus 483 lGI 485 (675)
T TIGR01497 483 AGV 485 (675)
T ss_pred cCC
Confidence 765
No 326
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=42.93 E-value=1.9e+02 Score=31.42 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc------cC--CeEEECCC--CHHHH
Q 003029 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL------GA--GAILVNPW--NITEV 517 (856)
Q Consensus 448 v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l------g~--~g~lVnP~--d~~~l 517 (856)
.+..++..++..||+++-.+ |+|+ +.|+++++ .|+|+=...|..|+. .. -|..+++. +++.+
T Consensus 239 ~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g----~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 239 FSTPDFAELMAAADLVISKG---GYTT-ISEALALG----KPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred cChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcC----CCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 34578999999999998764 5553 78999995 666666666666654 12 24454443 56888
Q ss_pred HHHHHH
Q 003029 518 ANAIAR 523 (856)
Q Consensus 518 A~ai~~ 523 (856)
+++|.+
T Consensus 311 ~~~l~~ 316 (318)
T PF13528_consen 311 AEFLER 316 (318)
T ss_pred HHHHhc
Confidence 887765
No 327
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=42.79 E-value=41 Score=31.64 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=28.4
Q ss_pred HHHHhcCCCCEEEEeCccc-hhHHHHHHhcCCCCeEEEEEec
Q 003029 224 VVNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHT 264 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl-~llp~~lr~~~~~~~i~~flH~ 264 (856)
++.+..+ .|+||+|.... .+++.++++.....++.++.|.
T Consensus 68 k~ik~~~-~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 68 KIIKKEK-PDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HHhccCC-CCEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 3343344 69999999876 5667777665555899999984
No 328
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=42.65 E-value=48 Score=41.39 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=54.7
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.+.....+.+++-+||+++-.-. ....+-+...++|++|.+ .|+.++++||..........+.+++
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~-----------l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA-----------LQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE-----------EecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 4556667788899999998774321 234577899999999986 6999999999999999999998876
No 329
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=42.48 E-value=23 Score=38.89 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=29.5
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCC---CCeEEEEc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP---KTTIVVLS 646 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~---g~~V~I~S 646 (856)
=-|+||+||.|+-- +++-+...++|+.|.+++ ++.+++.|
T Consensus 36 fgfafDIDGVL~RG---------------~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRG---------------HRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred eeEEEecccEEEec---------------CCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 35999999999954 346678999999999754 34455554
No 330
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=42.17 E-value=2.1e+02 Score=35.54 Aligned_cols=193 Identities=13% Similarity=0.088 Sum_probs=114.4
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----c----CCeEEECCCCHH
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----G----AGAILVNPWNIT 515 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g----~~g~lVnP~d~~ 515 (856)
-+.++.+.....++.-++.++|.-|+-.=+.++|+-..+ .+-..+|++...-..+.+ + .-.++.-|+|.-
T Consensus 231 vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~~~a~lIlTgg~~~~~~v~~l~~~a~~~~ipVl~t~~dT~ 309 (684)
T PRK05632 231 VCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-PPIAGLLLTGGYEPDPRIAKLCEGAFETGLPVLSVDTNTY 309 (684)
T ss_pred EEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-CCceEEEEcCCCCCCHHHHHHHhhcccCCCCEEEecCCHH
Confidence 466677888888887778777787776667777762111 011236666544322222 1 124666799999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhHHhhhhccccCCCCcchHHHHHHHHhcCCeEE
Q 003029 516 EVANAIARALNMSPEEREKRHWHNFTHVTTH-TAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLL 594 (856)
Q Consensus 516 ~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI 594 (856)
+.|..|.++..--..+-.++.....+.+.+| |..+|.+. |. ... .+...++|..-...+.+.-+..++|++
T Consensus 310 ~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~----~~~---~~~~~~~p~~~~~~l~~~a~~~~~~i~ 381 (684)
T PRK05632 310 QTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT----ATS---ERSRRLSPPAFRYQLTERARAAKKRIV 381 (684)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc----cCC---CCCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999776422222234456667777777 77777764 32 100 112234455566677777776676755
Q ss_pred EEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEe
Q 003029 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (856)
Q Consensus 595 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~ 674 (856)
+-. | -.++++++...+.+ .|..-.|.-|+. +.+++.+...++.+ ..|..|.+
T Consensus 382 ~~e--~----------------------~d~~~l~Aa~~~~~-~g~~~~iLvG~~-~~I~~~~~~~~~~l--~~~~~Ii~ 433 (684)
T PRK05632 382 LPE--G----------------------DEPRTLKAAAICLE-RGIADCVLLGNP-EEIRRVAAAQGVDL--PAGIEIID 433 (684)
T ss_pred EeC--C----------------------CCHHHHHHHHHHHH-cCCceEEEECCH-HHHHHHHHHcCCCc--cCCcEEEC
Confidence 522 1 13678888888775 577766777875 35666666554322 13555554
No 331
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=42.05 E-value=37 Score=36.41 Aligned_cols=16 Identities=13% Similarity=0.212 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 3 ~~k~vIFDlDGTLiDs 18 (267)
T PRK13478 3 KIQAVIFDWAGTTVDF 18 (267)
T ss_pred ceEEEEEcCCCCeecC
Confidence 4689999999999987
No 332
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=41.16 E-value=77 Score=33.50 Aligned_cols=62 Identities=6% Similarity=0.218 Sum_probs=41.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC-CCHhhHHHH
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG-SDRNVLDKN 656 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~ 656 (856)
+..++.+.|...-..+++.|+|||+... +...+.++++++..+..|.+.=| |+.++++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~-------------------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l 91 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK-------------------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDA 91 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC-------------------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHH
Confidence 6777778887765679999999998653 12456666666544444444333 567778777
Q ss_pred hc
Q 003029 657 FQ 658 (856)
Q Consensus 657 ~~ 658 (856)
+.
T Consensus 92 ~~ 93 (228)
T PRK04128 92 YE 93 (228)
T ss_pred HH
Confidence 65
No 333
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=41.06 E-value=66 Score=41.22 Aligned_cols=39 Identities=13% Similarity=0.180 Sum_probs=34.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
+|-++++++++.|.+ .|++|+++||-.........++++
T Consensus 547 ppr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 547 PPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred CCCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcC
Confidence 366789999999885 799999999999999988888876
No 334
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=41.02 E-value=3.7e+02 Score=29.06 Aligned_cols=44 Identities=20% Similarity=0.349 Sum_probs=27.7
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ 284 (856)
++|.+..+.-|||-|-.||.- +|+||-..-+-.+.-..++|..+
T Consensus 57 ~~i~~~ak~a~VitISHYHYD------------------HhtPf~~~~y~~s~e~~~eiY~g 100 (304)
T COG2248 57 EKIQRYAKKADVITISHYHYD------------------HHTPFFDGIYEASGETAKEIYKG 100 (304)
T ss_pred HHHHHHHhhCCEEEEeeeccc------------------cCCccccchhhhcccchHHHhcC
Confidence 566677777899999888865 78887543333333333444443
No 335
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=40.55 E-value=24 Score=36.20 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=32.8
Q ss_pred EEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 760 VEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 760 vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
-+-...+-.|+.++..+.+ + .+...++.+|| +.||.+| ..-+
T Consensus 151 ~~ptsdsggKa~~i~~lrk--~------~~~~~~~mvGD-GatDlea-~~pa 192 (227)
T KOG1615|consen 151 NEPTSDSGGKAEVIALLRK--N------YNYKTIVMVGD-GATDLEA-MPPA 192 (227)
T ss_pred CCccccCCccHHHHHHHHh--C------CChheeEEecC-Ccccccc-CCch
Confidence 4445567789999999887 3 34778999999 9999999 5543
No 336
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=40.04 E-value=39 Score=33.92 Aligned_cols=34 Identities=6% Similarity=-0.041 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
-..+.++++.++ .+++++++||| ..+|+.+ -+.+
T Consensus 106 p~~~~~~~~~l~------~~~~~~~~VgD-s~~Di~~-A~~a 139 (181)
T PRK08942 106 PGMLLSIAERLN------IDLAGSPMVGD-SLRDLQA-AAAA 139 (181)
T ss_pred HHHHHHHHHHcC------CChhhEEEEeC-CHHHHHH-HHHC
Confidence 467778888888 56899999999 9999777 4444
No 337
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=39.82 E-value=15 Score=38.09 Aligned_cols=17 Identities=12% Similarity=0.173 Sum_probs=14.9
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
...+.|+||+||||++.
T Consensus 5 ~~~k~iiFD~DGTL~d~ 21 (222)
T PRK10826 5 RQILAAIFDMDGLLIDS 21 (222)
T ss_pred ccCcEEEEcCCCCCCcC
Confidence 45789999999999987
No 338
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.57 E-value=56 Score=33.04 Aligned_cols=82 Identities=12% Similarity=0.156 Sum_probs=47.1
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCC---------CCCCCCcccc------c-----cccCCChhHHHHHHHhhcC
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVD---------TPGRRGDQIR------E-----MELKLHPDLKQPLNALCHD 637 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~---------~p~~~~~~~~------~-----~~~~~s~~~~~~L~~L~~d 637 (856)
+++++..+...-+--.+-||+|.|++=..+ .|+.. +-++ . .+-.++.++...|-..-..
T Consensus 50 SvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~-DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSE-DYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChH-HhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 555666655554555677899999885421 11100 0000 0 1224555555555454555
Q ss_pred CCCeEEEEcCCCHhhHHHHhccc
Q 003029 638 PKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 638 ~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.|-.|+.+|||+....+..-+.+
T Consensus 129 RGD~i~FvTGRt~gk~d~vsk~L 151 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDTVSKTL 151 (237)
T ss_pred cCCeEEEEecCCCCcccccchhH
Confidence 89999999999987665444433
No 339
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=37.46 E-value=30 Score=33.42 Aligned_cols=41 Identities=20% Similarity=0.390 Sum_probs=34.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.++.+.+.+.|++|.+ .|..++|+|+.+...++..+..+++
T Consensus 76 ~~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~ 116 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGL 116 (176)
T ss_dssp EEESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTH
T ss_pred cchhhhhhhhhhhccc-ccceeEEeecCCccccccccccccc
Confidence 3466789999999986 6999999999999988888887653
No 340
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=36.89 E-value=6.2e+02 Score=28.08 Aligned_cols=111 Identities=17% Similarity=0.103 Sum_probs=59.2
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChH---HHHHHHHHHHHHHHHhhcccCCCC
Q 003029 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP---EYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 361 ~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~---~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
.+..+|...|-+.+..-- .+-+|-+.+..+.+.+....+.|+||++++.-.- ....+.+++.+++.. +| ..
T Consensus 111 ~~~Nvl~t~ga~~~i~~~-~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~----~~-~~ 184 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITPE-RLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA----YG-GS 184 (311)
T ss_pred CCCceEecccCCCcCCHH-HHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh----CC-Ce
Confidence 356788888777766543 2334444555555555566778889988765322 233555555555544 22 11
Q ss_pred cccEEEeCCCCCHHHHHHHHHHc---c-EEEECCCCcCCChhHHHHHhh
Q 003029 438 AVPIHHLDRSLDFPALCALYAVT---D-VALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~A---D-v~v~~S~~EG~~Lv~lEama~ 482 (856)
| -|. ..+.-+.+-..+|-..+ + +.+. -.+|-| ...+++++
T Consensus 185 ~-~vt-tSRRTp~~~~~~L~~~~~~~~~~~~~--~~~~~n-Py~~~La~ 228 (311)
T PF06258_consen 185 L-LVT-TSRRTPPEAEAALRELLKDNPGVYIW--DGTGEN-PYLGFLAA 228 (311)
T ss_pred E-EEE-cCCCCcHHHHHHHHHhhcCCCceEEe--cCCCCC-cHHHHHHh
Confidence 2 122 23455555555554444 2 3233 446655 45567776
No 341
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=36.82 E-value=82 Score=28.86 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 417 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~ 417 (856)
..|...++++++.+|+.+ +|.||..+..|..-|.+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAE 83 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHH
Confidence 578889999999999876 78888877666555543
No 342
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=35.89 E-value=94 Score=39.32 Aligned_cols=231 Identities=12% Similarity=0.090 Sum_probs=118.0
Q ss_pred CcchHHHHHHHHhcCCeEEEEecCC----ccCCCCCCCCC-CCccc-----cccccCCChhHHHHHHHhhcCCCCeEEEE
Q 003029 576 SLREADSIERYLRSNNRLLILGFNA----TLTEPVDTPGR-RGDQI-----REMELKLHPDLKQPLNALCHDPKTTIVVL 645 (856)
Q Consensus 576 ~l~~~~~~~~y~~s~~rLI~lD~DG----TL~~~~~~p~~-~~~~~-----~~~~~~~s~~~~~~L~~L~~d~g~~V~I~ 645 (856)
.-|.++..+.|.....|+|++-.-- ||..-..-++. ..+.+ --+..++.++++.+|++|.+ .++..+.|
T Consensus 649 P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~-AnIRtVMc 727 (1140)
T KOG0208|consen 649 PADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNR-ANIRTVMC 727 (1140)
T ss_pred CccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHh-hcceEEEE
Confidence 3499999999999999999987521 22111000000 00000 01456788999999999985 79999999
Q ss_pred cCCCHhhHHHHhcccCceEEeeCceEEEe--c-C-------CeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeec
Q 003029 646 SGSDRNVLDKNFQEYNLWLAAENGMFLRC--T-T-------GKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRE 715 (856)
Q Consensus 646 SGR~~~~l~~~~~~l~lgliaenG~~i~~--~-~-------~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~ 715 (856)
||-+.-..-...+ +.|+|.+.+-.|.. . . -.|...-.......-++. ..+...++.--+..
T Consensus 728 TGDNllTaisVak--eCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~-------~~~~~~~~~~~d~~ 798 (1140)
T KOG0208|consen 728 TGDNLLTAISVAK--ECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEP-------DPDLASVKLSLDVL 798 (1140)
T ss_pred cCCchheeeehhh--cccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCcc-------CccccCCccChhhh
Confidence 9986654322222 34666666554432 1 1 136543110000000000 00000110000000
Q ss_pred ceEEEEeecCChhhhHHH--HHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE
Q 003029 716 TSLVWNYKYADVEFGRIQ--ARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (856)
Q Consensus 716 ~si~~~y~~~d~e~~~~q--a~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v 793 (856)
..-.+|.--.-+.|.... ..++..++ +.+.. |=.|..--.|..-++. ++++| -.|
T Consensus 799 ~~~~yhlA~sG~~f~~i~~~~~~l~~~I----l~~~~---------VfARMsP~qK~~Lie~-lQkl~---------y~V 855 (1140)
T KOG0208|consen 799 SEKDYHLAMSGKTFQVILEHFPELVPKI----LLKGT---------VFARMSPDQKAELIEA-LQKLG---------YKV 855 (1140)
T ss_pred ccceeEEEecCchhHHHHhhcHHHHHHH----HhcCe---------EEeecCchhHHHHHHH-HHhcC---------cEE
Confidence 001123322223333211 22333333 22212 2223333467777765 46666 257
Q ss_pred EEEecCCcccccccccccccCcceEEeCC---C-Cc---cccCCHHHHHHHHHHHHHH
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDS---S-FL---HYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~---~-~~---~~l~~~~~~~~~l~~~~~~ 844 (856)
...|| +.||-.. ++++. ++|.... + ++ -..++..||...+++...+
T Consensus 856 gfCGD-GANDCgA-LKaAd---vGISLSeaEASvAApFTSk~~~I~cVp~vIrEGRaA 908 (1140)
T KOG0208|consen 856 GFCGD-GANDCGA-LKAAD---VGISLSEAEASVAAPFTSKTPSISCVPDVIREGRAA 908 (1140)
T ss_pred EecCC-Ccchhhh-hhhcc---cCcchhhhhHhhcCccccCCCchhhHhHHHhhhhhh
Confidence 88899 9999999 88773 3444422 1 22 6677999999999886544
No 343
>PRK09449 dUMP phosphatase; Provisional
Probab=35.70 E-value=61 Score=33.48 Aligned_cols=16 Identities=13% Similarity=0.146 Sum_probs=13.7
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
..|.|+||+||||++.
T Consensus 2 ~~k~iiFDlDGTLid~ 17 (224)
T PRK09449 2 KYDWILFDADETLFHF 17 (224)
T ss_pred CccEEEEcCCCchhcc
Confidence 4688999999999974
No 344
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=34.71 E-value=25 Score=45.67 Aligned_cols=55 Identities=2% Similarity=-0.156 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCCCC---------c-cccCCHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSSF---------L-HYLRMKMCM 834 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~~---------~-~~l~~~~~~ 834 (856)
+.....+++++++ ++++++++||| ..+|+.. +...+ .+|.|.... + +-+.+..++
T Consensus 220 ~Pe~~~~a~~~lg------v~p~e~v~IgD-s~~Di~A----A~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILG------VPTSECVVIED-ALAGVQA----ARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcC------cCcccEEEEcC-CHHHHHH----HHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 4677788899998 56899999999 8887555 55544 466775421 1 556666664
No 345
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=34.59 E-value=47 Score=33.89 Aligned_cols=40 Identities=13% Similarity=0.193 Sum_probs=33.8
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.+.+.+.|+.|.+ .|..++|+||.+...+...++.+++
T Consensus 75 ~~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 75 EVFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCC
Confidence 356789999999986 6999999999999998888887654
No 346
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=34.52 E-value=1.1e+02 Score=30.74 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=45.1
Q ss_pred CCCEEEEeCc-cchhHHHHHHhcCCCCeEEEEEec-C--CCchhh-hhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHH
Q 003029 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHT-P--FPSSEI-HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA 305 (856)
Q Consensus 231 ~~DvIwvHDy-hl~llp~~lr~~~~~~~i~~flH~-P--fP~~e~-fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~ 305 (856)
..|+|..-|. .|.-+-.+.+ ....+|.....|- - +|-++- -+.+-..---+-+-|.||.|.|.+.-..+.|+..
T Consensus 59 ~~dll~aTsmldLa~l~gL~p-~l~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~saLaAD~v~FNS~~nr~sFL~~ 137 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRP-DLANVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSALAADRVVFNSAFNRDSFLDG 137 (168)
T ss_pred CCCEEEeeccccHHHHHhhcc-CCCCCCEEEEEecCcccCCCCCCccccccHHHHHHHHHHhceeeeecchhhHHHHHHH
Confidence 4589888763 2222222222 2334554444453 2 332220 1111111122456789999999999999999999
Q ss_pred HHHHhC
Q 003029 306 CTRILG 311 (856)
Q Consensus 306 ~~~~lg 311 (856)
+..++.
T Consensus 138 ~~~fL~ 143 (168)
T PF12038_consen 138 IPSFLK 143 (168)
T ss_pred HHHHHH
Confidence 988875
No 347
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=34.22 E-value=1.4e+02 Score=29.64 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHc---cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAVT---DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~A---Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVnP~d~~~lA~a 520 (856)
+.+|-.+..+.+ -..|---+-+|=||.++|++.....+-..+|++-++.++--+ |..-++--|-|.+++..|
T Consensus 41 ~~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aA 120 (182)
T COG4567 41 SVEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAA 120 (182)
T ss_pred cHHHHHHHHhcCCCceEEEEeeecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHH
Confidence 345555544433 233334456899999999999887778899999999888765 555689999999999999
Q ss_pred HHHH
Q 003029 521 IARA 524 (856)
Q Consensus 521 i~~a 524 (856)
+.+.
T Consensus 121 l~~~ 124 (182)
T COG4567 121 LLRR 124 (182)
T ss_pred Hhhc
Confidence 8876
No 348
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=34.21 E-value=95 Score=29.75 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=42.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (856)
+++-+|+|+|+-|....+|+.+ .....-+.....|..|++ .|++.+++|--.-..+.
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g-----~e~~fY~Di~rIL~dLk~-~GVtl~~ASRt~ap~iA 75 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKG-----EEMIFYDDIRRILVDLKK-LGVTLIHASRTMAPQIA 75 (144)
T ss_pred EEEEecccccccccccCcccCc-----ceeeeccchhHHHHHHHh-cCcEEEEecCCCCHHHH
Confidence 7889999999999877665322 233456788999999985 79999999976555443
No 349
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=33.88 E-value=1e+02 Score=34.82 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=60.6
Q ss_pred CCeEEEEcC-c----EEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 749 ASVEVVQGS-K----SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 749 ~~v~v~~g~-~----~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
....++.|. + .|+++|+|++ |..++++|+..++ ....--++|| . .. + ...+|++|.-
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~~G~d-GarvE~vle~~~I------~~NKNtvpGD-~----Sa----l--~PgGiRiGtP 401 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRPKGVD-GARVEKVLELCHI------ALNKNTVPGD-K----SA----L--SPGGIRIGTP 401 (477)
T ss_pred cCceEecCCccceEEEEeccccCCc-hHHHHHHHHHhhh------hhcCCcCCCC-c----cc----c--CCCceeccch
Confidence 356666652 2 5899999997 6778999999884 3444568888 2 22 2 2456777764
Q ss_pred C---c-cccCCHHHHHHHHHHHHHHHHhcCCC
Q 003029 824 F---L-HYLRMKMCMRFLSQNYLMMARAFQEP 851 (856)
Q Consensus 824 ~---~-~~l~~~~~~~~~l~~~~~~~~~~~~~ 851 (856)
+ . +.=.+-..|.+++.+-++-+..+|.-
T Consensus 402 AmTsRG~~e~df~~v~~fi~~av~i~~~~~~~ 433 (477)
T KOG2467|consen 402 AMTSRGFGEEDFEKVADFIDRAVKIALEIQKE 433 (477)
T ss_pred hhcccCccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 2 77778888999999999998888743
No 350
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=33.53 E-value=49 Score=33.74 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=33.5
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+-+.+.+.|+.|.+ .|.+++|+|+.+...++.+++.+++
T Consensus 86 ~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 124 (213)
T TIGR01449 86 VFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGL 124 (213)
T ss_pred cCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCc
Confidence 45678999999986 6999999999999999998888754
No 351
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=33.41 E-value=77 Score=39.10 Aligned_cols=70 Identities=11% Similarity=0.186 Sum_probs=54.3
Q ss_pred HHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 581 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 581 ~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
...+.+.+...+.+++-.|++++--.. ..-.+-+++++++++|.+ .|++++++||-..........++
T Consensus 415 ~~~~~~a~~G~~~l~va~~~~~lG~i~-----------l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAEDNRVLGVIY-----------LKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHHhCCCcEEEEEECCeEEEEEE-----------EeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 344556666678888888988774321 123467899999999986 79999999999999999998887
Q ss_pred Cc
Q 003029 661 NL 662 (856)
Q Consensus 661 ~l 662 (856)
++
T Consensus 483 GI 484 (679)
T PRK01122 483 GV 484 (679)
T ss_pred CC
Confidence 75
No 352
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=33.31 E-value=26 Score=36.39 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=25.9
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+.|.+.+.|+.|.+ .|+.++|+||.....++.+++.+
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 44567777777764 57778888887777777766664
No 353
>PRK11590 hypothetical protein; Provisional
Probab=31.62 E-value=70 Score=33.06 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=33.5
Q ss_pred ChhHHHHH-HHhhcCCCCeEEEEcCCCHhhHHHHhcccC----ceEEeeC
Q 003029 624 HPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAAEN 668 (856)
Q Consensus 624 s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----lgliaen 668 (856)
-|.+.+.| +.|.+ .|..++|+|+.+...+++++..++ ..++|..
T Consensus 97 ~pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~ 145 (211)
T PRK11590 97 FPVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQ 145 (211)
T ss_pred CccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHHccccccCceEEEE
Confidence 35688888 45664 699999999999999998887765 4566543
No 354
>PRK06769 hypothetical protein; Validated
Probab=31.11 E-value=50 Score=33.07 Aligned_cols=41 Identities=7% Similarity=-0.020 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL 820 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V 820 (856)
+-..+.+++++++ .++++++.||| ..+|..+ +...+ .+|.|
T Consensus 95 ~p~~~~~~~~~l~------~~p~~~i~IGD-~~~Di~a----A~~aGi~~i~v 136 (173)
T PRK06769 95 STGMLLQAAEKHG------LDLTQCAVIGD-RWTDIVA----AAKVNATTILV 136 (173)
T ss_pred CHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH----HHHCCCeEEEE
Confidence 3456678888888 56899999999 8877655 44443 35555
No 355
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=30.97 E-value=3e+02 Score=28.04 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=49.9
Q ss_pred CHHHHHHHHH--HccEEEECCCCcC----CChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHH
Q 003029 449 DFPALCALYA--VTDVALVTSLRDG----MNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEV 517 (856)
Q Consensus 449 ~~~el~aly~--~ADv~v~~S~~EG----~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~l 517 (856)
+.++....+. ..|++++-....+ -|+..++.+........++++|....... .+ |..|++..|.+++++
T Consensus 37 ~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l 116 (216)
T PRK10840 37 DSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 (216)
T ss_pred CHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 3455555544 3688887543333 46666776653222235667776654332 12 677999999999999
Q ss_pred HHHHHHHHc
Q 003029 518 ANAIARALN 526 (856)
Q Consensus 518 A~ai~~aL~ 526 (856)
..+|..++.
T Consensus 117 ~~ai~~v~~ 125 (216)
T PRK10840 117 PKALAALQK 125 (216)
T ss_pred HHHHHHHHC
Confidence 999998875
No 356
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=30.87 E-value=28 Score=33.80 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL 820 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V 820 (856)
.|...+.++++.++ +++++++.||| +..|..+ ++..+ -+|.|
T Consensus 102 P~~~~~~~~~~~~~------~~~~e~i~IGD-s~~Di~~----A~~~Gi~~v~i 144 (147)
T TIGR01656 102 PKPGLILEALKRLG------VDASRSLVVGD-RLRDLQA----ARNAGLAAVLL 144 (147)
T ss_pred CCHHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH----HHHCCCCEEEe
Confidence 46778899999988 57899999999 7666444 55554 34544
No 357
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=30.59 E-value=3.8e+02 Score=29.72 Aligned_cols=55 Identities=5% Similarity=0.161 Sum_probs=32.3
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
+...+....++...+..++|..|-.... .....+.+.+.+..+. +...|+|++|-
T Consensus 144 Sa~l~a~~L~~~Gi~A~~vD~~~~~~~~--------------~~t~~~~i~~~~~~~~--~~~~v~IvtGF 198 (304)
T cd04248 144 SAFNTALLLQNRGVNARFVDLSGWRDSG--------------DMTLDERISEAFRDID--PRDELPIVTGY 198 (304)
T ss_pred HHHHHHHHHHHCCCCeEEECcccccccC--------------CCCcHHHHHHHHHhhc--cCCcEEEeCCc
Confidence 3444444455566788898988754321 1112355666666643 35579999994
No 358
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=30.25 E-value=9.9e+02 Score=28.39 Aligned_cols=102 Identities=10% Similarity=0.048 Sum_probs=60.2
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc-cC-CeEEECC--CCHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-GA-GAILVNP--WNIT 515 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l-g~-~g~lVnP--~d~~ 515 (856)
+.+.+|+.++.+- ..+++||- .-|+| ...||+.++ .|+|+--..+ -+..+ .. .|+.+++ .+.+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~G----vP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDAL----VPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcC----CCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 4778888765432 45777774 35544 578999994 6666654432 11112 11 3677765 4778
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh------cCHHHHHHHHH
Q 003029 516 EVANAIARALNMSPEEREKRHWHNFTHVTT------HTAQEWAETFV 556 (856)
Q Consensus 516 ~lA~ai~~aL~~~~~er~~r~~~~~~~v~~------~~~~~W~~~fl 556 (856)
++++||.++|+++. -+++.++..+.+.. ..+-+|++..+
T Consensus 421 ~l~~ai~~vl~~~~--y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 421 QLVLAIVDVIENPK--YRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred HHHHHHHHHhCCHH--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 99999999998642 33334444343432 23456666543
No 359
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=30.01 E-value=2.3e+02 Score=27.11 Aligned_cols=71 Identities=24% Similarity=0.335 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 380 ~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
..+.++..+.+++. +..++||.|-..++.+ .+....+++.++++..+|+ .||.++....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 55677777777654 3467799887665543 3456677888888877774 379998888877766666665
Q ss_pred c
Q 003029 460 T 460 (856)
Q Consensus 460 A 460 (856)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 360
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=29.82 E-value=88 Score=39.99 Aligned_cols=69 Identities=12% Similarity=0.208 Sum_probs=50.9
Q ss_pred HHHHHHhcCCeEEEEecCC-----ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 582 SIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
....|.+...|.+++-+++ |++--.. ...++-+.+.++|++|.+ .|++|+++||-........
T Consensus 494 ~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~i 561 (884)
T TIGR01522 494 EAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSI 561 (884)
T ss_pred HHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHH
Confidence 3445666667888888776 3332210 123467899999999985 7999999999999999988
Q ss_pred hcccCc
Q 003029 657 FQEYNL 662 (856)
Q Consensus 657 ~~~l~l 662 (856)
...+++
T Consensus 562 a~~~Gi 567 (884)
T TIGR01522 562 ARRLGM 567 (884)
T ss_pred HHHcCC
Confidence 887753
No 361
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=29.80 E-value=55 Score=42.36 Aligned_cols=40 Identities=3% Similarity=0.014 Sum_probs=35.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.++-+++.++|++|.+ .|+.|+++|||....+....+.++
T Consensus 567 Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred CCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 3577899999999986 799999999999999988888765
No 362
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=29.52 E-value=58 Score=35.69 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=39.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+.-.|+||.||.|..- . .+-|-+.++|..|.+ .|-.++++|-.+....+.+++.+
T Consensus 21 ~~DtfifDcDGVlW~g-~--------------~~ipGs~e~l~~L~~-~gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLG-E--------------KPIPGSPEALNLLKS-LGKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hcCEEEEcCCcceeec-C--------------CCCCChHHHHHHHHH-cCCcEEEEeCCCcchHHHHHHHH
Confidence 4567999999999973 2 233456666667665 46789999888887777776654
No 363
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=29.42 E-value=36 Score=34.70 Aligned_cols=43 Identities=5% Similarity=-0.050 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
+......+++++| ++++++++||| ...|. ++++..|+ +|.+.+
T Consensus 143 ~p~~~~~~~~~~~------~~p~~~l~vgD-~~~di----~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 143 EARIYQHVLQAEG------FSAADAVFFDD-NADNI----EAANALGITSILVTD 186 (199)
T ss_pred CHHHHHHHHHHcC------CChhHeEEeCC-CHHHH----HHHHHcCCEEEEecC
Confidence 5677888999998 67899999999 77774 44666664 455543
No 364
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=29.28 E-value=6.9e+02 Score=28.36 Aligned_cols=146 Identities=14% Similarity=0.163 Sum_probs=92.4
Q ss_pred ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC-CChHHHHHHHHHHHHHHHHhhc-ccCCCCcccEEEeCCCCCHH
Q 003029 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR-TDVPEYQRLTSQVHEIVGRING-RFGTLTAVPIHHLDRSLDFP 451 (856)
Q Consensus 374 ~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r-~~~~~~~~l~~~l~~lv~~IN~-~~g~~~~~pV~~~~g~v~~~ 451 (856)
-.|.-..=+.+.+.+-+..|+.. ..+.|++.-. .+.+++.. ++++++. +.|. --|.|..+..
T Consensus 201 vvK~~~~PmLi~E~aYR~~P~~v---~~~~V~Nt~~~ke~~~F~~-------f~~~ldlvr~gk------asfegR~~~p 264 (364)
T PF10933_consen 201 VVKTCFIPMLICEEAYRADPDAV---EHVYVTNTYHLKEHPTFVN-------FANSLDLVRDGK------ASFEGRFDFP 264 (364)
T ss_pred EEeecCccHHHHHHHHHhChhhc---ceEEEecchhhhcCHHHHH-------HHHhhHHhhcCe------eEEeeecChH
Confidence 33443444556666777788864 4555554321 12233333 3333332 2232 2246666666
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
+..+=| +|+.|.--.--|+|..-+|++-- |=|+|- -++.+++-|+.-+-+|..+=|+++.+|+...+..
T Consensus 265 ~fla~~--tD~VvSHqWeN~lNYlY~daLyg----gYPLVH-----NS~~l~d~GYYY~~fD~~~G~r~L~~A~~~HD~~ 333 (364)
T PF10933_consen 265 DFLAQH--TDAVVSHQWENPLNYLYYDALYG----GYPLVH-----NSPLLKDVGYYYPDFDAFEGARQLLRAIREHDAD 333 (364)
T ss_pred HHHHhC--CCEEEeccccchhhHHHHHHHhc----CCCccc-----CcchhcccCcCCCCccHHHHHHHHHHHHHHcccc
Confidence 666644 69988888889999999999875 356663 2455666789998999999999999999877655
Q ss_pred HHHHHHHHHHHHHhc
Q 003029 532 REKRHWHNFTHVTTH 546 (856)
Q Consensus 532 r~~r~~~~~~~v~~~ 546 (856)
...-.++.++.+.+.
T Consensus 334 ~~~Y~~ra~~~l~~~ 348 (364)
T PF10933_consen 334 LDAYRARARRLLDRL 348 (364)
T ss_pred HHHHHHHHHHHHHhh
Confidence 555555555555443
No 365
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=29.06 E-value=66 Score=32.63 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=30.3
Q ss_pred hHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 626 DLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 626 ~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
...++|+.|.+ .|..++|+||++...++..+..+++
T Consensus 110 ~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl 145 (197)
T TIGR01548 110 TPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGL 145 (197)
T ss_pred CHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCc
Confidence 34788888875 6999999999999999998888754
No 366
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=28.70 E-value=63 Score=34.38 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=47.4
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCcccc---------------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh-
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIR---------------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV- 652 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~---------------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~- 652 (856)
-+.+.|++|+|-|.++..+..| .|+. .-.+++-|-..+-|+-.-+ .|.+|+.+|-|..+.
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqg---y~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~~ 152 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQG---YQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQENE 152 (274)
T ss_pred CCCceEEEecchHhhcCccccc---hhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhcc
Confidence 3566999999999998754332 1111 1234555678888888654 799999999999887
Q ss_pred HHHHhccc
Q 003029 653 LDKNFQEY 660 (856)
Q Consensus 653 l~~~~~~l 660 (856)
.......+
T Consensus 153 ~~~T~~nL 160 (274)
T COG2503 153 KDGTIENL 160 (274)
T ss_pred cchhHHHH
Confidence 55555554
No 367
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=28.15 E-value=74 Score=32.19 Aligned_cols=40 Identities=18% Similarity=0.117 Sum_probs=34.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.+.+.+.|+.+.+ .|..|+|+||.....++.+...+++
T Consensus 87 ~~~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~lg~ 126 (202)
T TIGR01490 87 ILYPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARILGI 126 (202)
T ss_pred hccHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHcCC
Confidence 356789999999886 6999999999999999988887754
No 368
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=28.12 E-value=1.2e+02 Score=37.95 Aligned_cols=68 Identities=10% Similarity=0.141 Sum_probs=49.2
Q ss_pred HHHHHhcCCeEEEEec-C--C--ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 583 IERYLRSNNRLLILGF-N--A--TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~-D--G--TL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
.+.+.....|.+++=+ | + +++--.. ...+|-+++.+++++|.+ .|++|+++||..........
T Consensus 409 ~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~-----------l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA 476 (755)
T TIGR01647 409 VDELASRGYRALGVARTDEEGRWHFLGLLP-----------LFDPPRHDTKETIERARH-LGVEVKMVTGDHLAIAKETA 476 (755)
T ss_pred HHHHHhCCCEEEEEEEEcCCCCcEEEEEee-----------ccCCChhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHH
Confidence 3445555678888766 2 2 3332210 123467899999999986 79999999999999999999
Q ss_pred cccCc
Q 003029 658 QEYNL 662 (856)
Q Consensus 658 ~~l~l 662 (856)
+++++
T Consensus 477 ~~lGI 481 (755)
T TIGR01647 477 RRLGL 481 (755)
T ss_pred HHcCC
Confidence 88775
No 369
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=27.15 E-value=35 Score=33.98 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
-|-..+..++++++ ++++++++||| ..+|.++ +...++ +|.|..
T Consensus 104 P~~~~~~~~~~~~~------~~~~e~l~IGD-~~~Di~~----A~~aGi~~i~~~~ 148 (161)
T TIGR01261 104 PKIKLLEPYLKKNL------IDKARSYVIGD-RETDMQL----AENLGIRGIQYDE 148 (161)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHH----HHHCCCeEEEECh
Confidence 45677888899888 67899999999 8888777 444443 455543
No 370
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=26.89 E-value=1.2e+02 Score=37.39 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=53.9
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+.....+.+.+...+.++.-.|++++--.. ..-.+-+++++++++|.+ .|++++++||-.........
T Consensus 408 ~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~-----------l~Dp~R~~a~e~I~~Lr~-~GI~vvMiTGDn~~TA~aIA 475 (673)
T PRK14010 408 DLDALVKGVSKKGGTPLVVLEDNEILGVIY-----------LKDVIKDGLVERFRELRE-MGIETVMCTGDNELTAATIA 475 (673)
T ss_pred HHHHHHHHHHhCCCeEEEEEECCEEEEEEE-----------eecCCcHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHH
Confidence 344455566666667666555777664321 123467899999999986 79999999999999999999
Q ss_pred cccCc
Q 003029 658 QEYNL 662 (856)
Q Consensus 658 ~~l~l 662 (856)
+++++
T Consensus 476 ~elGI 480 (673)
T PRK14010 476 KEAGV 480 (673)
T ss_pred HHcCC
Confidence 98876
No 371
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=26.12 E-value=75 Score=31.69 Aligned_cols=64 Identities=14% Similarity=0.053 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCc-ceEEeCCCCc----cccCCHHHHHHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTI-STVRLDSSFL----HYLRMKMCMRFLSQNY 841 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~-~~v~V~~~~~----~~l~~~~~~~~~l~~~ 841 (856)
-+...+..++++++ .+++.+++||| +. +|+.. ++..+ .+|.|..... +...-..++.+++.+.
T Consensus 92 P~p~~~~~~l~~~~------~~~~~~l~IGD-s~~~Di~a----A~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~ 160 (170)
T TIGR01668 92 PPGCAFRRAHPEMG------LTSEQVAVVGD-RLFTDVMG----GNRNGSYTILVEPLVHPDQWFIKRIWRRVERTVLKF 160 (170)
T ss_pred CChHHHHHHHHHcC------CCHHHEEEECC-cchHHHHH----HHHcCCeEEEEccCcCCccccchhhHHHHHHHHHHH
Confidence 35678899999988 56889999999 86 68555 54444 5777754321 3222344455555444
Q ss_pred H
Q 003029 842 L 842 (856)
Q Consensus 842 ~ 842 (856)
+
T Consensus 161 ~ 161 (170)
T TIGR01668 161 L 161 (170)
T ss_pred h
Confidence 3
No 372
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=25.40 E-value=43 Score=32.34 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNL 806 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M 806 (856)
.+..+.+.++++++ ++++.++.||| +..|..+
T Consensus 134 p~~~~~~~~~~~~~------~~p~~~~~vgD-~~~d~~~ 165 (176)
T PF13419_consen 134 PDPDAYRRALEKLG------IPPEEILFVGD-SPSDVEA 165 (176)
T ss_dssp TSHHHHHHHHHHHT------SSGGGEEEEES-SHHHHHH
T ss_pred hHHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHH
Confidence 34688999999998 67899999999 8888666
No 373
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=25.29 E-value=83 Score=32.27 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=32.1
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+.|.+.+.|+.|.+ .|.+++|+|+.+...+...+..+++
T Consensus 95 ~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 95 VYPGVRDTLMELRE-SGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHhCCh
Confidence 45678999999986 6899999999998888777777653
No 374
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=25.25 E-value=78 Score=32.55 Aligned_cols=15 Identities=20% Similarity=0.339 Sum_probs=13.0
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|+|+||+||||++.
T Consensus 1 ~k~iiFD~DGTL~ds 15 (220)
T TIGR03351 1 ISLVVLDMAGTTVDE 15 (220)
T ss_pred CcEEEEecCCCeecc
Confidence 478999999999987
No 375
>PRK11587 putative phosphatase; Provisional
Probab=24.75 E-value=75 Score=32.81 Aligned_cols=16 Identities=13% Similarity=0.376 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.+.|+||+||||++.
T Consensus 2 ~~k~viFDlDGTL~Ds 17 (218)
T PRK11587 2 RCKGFLFDLDGTLVDS 17 (218)
T ss_pred CCCEEEEcCCCCcCcC
Confidence 4688999999999987
No 376
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=24.74 E-value=87 Score=32.58 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=33.9
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+-+.+.++|..|++ .|...+|+|+++...++..+..+++
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~gl 128 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALGL 128 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhCC
Confidence 44568999999986 7999999999999999999998753
No 377
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=24.62 E-value=3.3e+02 Score=26.40 Aligned_cols=70 Identities=24% Similarity=0.317 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
.+..+..+.++++ +..++||.|...++.+ ......+++.+.++..+|+ .||+++....+-.+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566666666653 4578899887655443 3445667777777776663 3799988888777666666544
No 378
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=24.56 E-value=95 Score=31.34 Aligned_cols=39 Identities=26% Similarity=0.337 Sum_probs=32.1
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+-+.+.++|++|++ .|..++|+|+-+...+...+..+++
T Consensus 93 ~~~~~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 93 PHPDVPAGLRALKE-RGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 34678899999986 6899999999999888888777653
No 379
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=24.45 E-value=6.8e+02 Score=26.59 Aligned_cols=113 Identities=18% Similarity=0.171 Sum_probs=64.0
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
-++++-+|+...-=+.....-+..|+...| +|++| |+-+...++..+.+...+...+++.+ +..
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~~~~----~v~fI----PtAs~~~~~~~y~~~~~~af~~lG~~--------v~~ 66 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLAGRR----KAVFI----PYAGVTQSWDDYTAKVAEALAPLGIE--------VTG 66 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHcCCC----eEEEE----CCCCCCCCHHHHHHHHHHHHHHCCCE--------EEE
Confidence 366778888774444666666777766332 34443 33333334444444555555444432 333
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCC----------CcCCChhHHHHHhhcCCCCceEEEeCCCCchh
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSL----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~----------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~ 500 (856)
+... ++..+.+..||+..++-= .-|+--.+.|++.. |.+++...||+.-
T Consensus 67 l~~~---~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~-----G~~~~G~SAGAii 125 (233)
T PRK05282 67 IHRV---ADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKN-----GTPYIGWSAGANV 125 (233)
T ss_pred eccc---hhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHC-----CCEEEEECHHHHh
Confidence 3322 445677899998777642 23444456787664 6777788888753
No 380
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=24.38 E-value=1.1e+02 Score=34.99 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=28.8
Q ss_pred ChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 624 HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 624 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
-+-+.+.|+.|.+ .|+.++|+|+.+...++..++.+
T Consensus 218 ~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~l 253 (381)
T PLN02575 218 RTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSI 253 (381)
T ss_pred CcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 3567888999875 69999999999888887666553
No 381
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=24.30 E-value=1.3e+02 Score=39.36 Aligned_cols=82 Identities=20% Similarity=0.292 Sum_probs=54.0
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCC-----CCCCC-CCccc-----cccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPV-----DTPGR-RGDQI-----REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~-----~~p~~-~~~~~-----~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 646 (856)
++.+..+.|.+...|+|++-|= .|-+.. +.+.. ..+.+ -....++.+++.++|++|.+ .|++|+++|
T Consensus 602 ~~~~~~~~~a~~G~RVLalA~k-~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~-agi~v~miT 679 (1054)
T TIGR01657 602 DYQEVLKSYTREGYRVLALAYK-ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR-ASIRTVMIT 679 (1054)
T ss_pred hHHHHHHHHHhcCCEEEEEEEe-ecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH-CCCeEEEEC
Confidence 5667778888888998888662 111100 00000 00000 01234688899999999986 799999999
Q ss_pred CCCHhhHHHHhcccC
Q 003029 647 GSDRNVLDKNFQEYN 661 (856)
Q Consensus 647 GR~~~~l~~~~~~l~ 661 (856)
|..........++++
T Consensus 680 GD~~~TA~~iA~~~g 694 (1054)
T TIGR01657 680 GDNPLTAVHVARECG 694 (1054)
T ss_pred CCCHHHHHHHHHHcC
Confidence 999999988877765
No 382
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=24.16 E-value=8.1e+02 Score=27.80 Aligned_cols=49 Identities=20% Similarity=0.167 Sum_probs=38.7
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF 495 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~ 495 (856)
+++.-.+.+++..+-..+|++-++|. +=.|...+++++.. +.|++++..
T Consensus 168 ~~tev~d~~~v~~~~~~~d~lqIga~-~~~n~~LL~~va~t---~kPVllk~G 216 (352)
T PRK13396 168 IITEVMDAADLEKIAEVADVIQVGAR-NMQNFSLLKKVGAQ---DKPVLLKRG 216 (352)
T ss_pred EEEeeCCHHHHHHHHhhCCeEEECcc-cccCHHHHHHHHcc---CCeEEEeCC
Confidence 34666677777777777999999985 78889999999863 678888864
No 383
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=23.99 E-value=71 Score=32.74 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=13.5
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
+|+|+||+||||++.
T Consensus 1 ~k~viFD~DGTL~d~ 15 (224)
T TIGR02254 1 YKTLLFDLDDTILDF 15 (224)
T ss_pred CCEEEEcCcCccccc
Confidence 478999999999987
No 384
>PRK14057 epimerase; Provisional
Probab=23.96 E-value=5.2e+02 Score=27.91 Aligned_cols=66 Identities=21% Similarity=0.164 Sum_probs=41.0
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH-ccEEEECCC
Q 003029 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV-TDVALVTSL 468 (856)
Q Consensus 399 v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~-ADv~v~~S~ 468 (856)
.+|++-..|..++..-.....+.++++.+.+..+ + +.-.+...|.++.+.+..+..+ ||++|.-|.
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~-~---~~~~IeVDGGI~~~ti~~l~~aGad~~V~GSa 223 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK-R---EGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSA 223 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc-C---CCceEEEECCCCHHHHHHHHHCCCCEEEEChH
Confidence 5688888888765443334444555544444322 1 1113346899999988887764 899888764
No 385
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=23.74 E-value=58 Score=30.60 Aligned_cols=43 Identities=7% Similarity=-0.044 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHh-CcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe
Q 003029 768 TKGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL 820 (856)
Q Consensus 768 nKG~av~~ll~~l-~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V 820 (856)
.|..+++++++++ + .++++++.|||+..+|+.+ ++..| .+|.|
T Consensus 86 P~~~~~~~~~~~~~~------~~~~~~v~IGD~~~~Di~~----A~~~Gi~~i~~ 130 (132)
T TIGR01662 86 PKPGMFLEALKRFNE------IDPEESVYVGDQDLTDLQA----AKRAGLAFILV 130 (132)
T ss_pred CChHHHHHHHHHcCC------CChhheEEEcCCCcccHHH----HHHCCCeEEEe
Confidence 3678899999998 5 5689999999922677666 54444 34443
No 386
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=23.73 E-value=71 Score=38.52 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
.|...++++.+ +.+.++++|| +.||.+| ++.++ ++|.++.
T Consensus 454 ~K~~~v~~l~~----------~~~~v~~VGD-g~nD~~a-l~~A~---vgia~g~ 493 (562)
T TIGR01511 454 DKAALIKELQE----------KGRVVAMVGD-GINDAPA-LAQAD---VGIAIGA 493 (562)
T ss_pred HHHHHHHHHHH----------cCCEEEEEeC-CCccHHH-HhhCC---EEEEeCC
Confidence 67777776643 2468999999 9999999 77664 5666654
No 387
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=23.51 E-value=72 Score=33.52 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=15.5
Q ss_pred hcCCeEEEEecCCccCCCC
Q 003029 588 RSNNRLLILGFNATLTEPV 606 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~ 606 (856)
++.+.|++||+|-|+++..
T Consensus 10 ~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cCCcEEEEEecCceeecCC
Confidence 4567899999999999764
No 388
>PLN00414 glycosyltransferase family protein
Probab=23.30 E-value=2.9e+02 Score=32.37 Aligned_cols=109 Identities=10% Similarity=0.177 Sum_probs=61.4
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe----CCCCchhhc--c-CCeEEECC-----C
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL--G-AGAILVNP-----W 512 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS----e~aG~~~~l--g-~~g~lVnP-----~ 512 (856)
.+.+|+.++.+- .+.++||- .-|+| ..+|+++++ .|+|+- +-.-.+..+ . .-|+.+.. -
T Consensus 317 ~~w~PQ~~vL~h-~~v~~fvt---H~G~n-S~~Ea~~~G----vP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 387 (446)
T PLN00414 317 EGWVEQPLILSH-PSVGCFVN---HCGFG-SMWESLVSD----CQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWF 387 (446)
T ss_pred eccCCHHHHhcC-CccceEEe---cCchh-HHHHHHHcC----CCEEecCcccchHHHHHHHHHHhCeEEEeccccCCcc
Confidence 577888775443 22344553 35666 468999993 455443 222222222 1 23566642 4
Q ss_pred CHHHHHHHHHHHHcCCHHH---HHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHh
Q 003029 513 NITEVANAIARALNMSPEE---REKRHWHNFTHVTTH-TAQEWAETFVSELNDT 562 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~e---r~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~ 562 (856)
+.+++++++++++..+.++ .+++.++.++.+..- ....+.+.|++.+.+.
T Consensus 388 ~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 388 SKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred CHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 7899999999999765422 233334444444332 2256677888777543
No 389
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=23.03 E-value=62 Score=35.34 Aligned_cols=22 Identities=14% Similarity=0.172 Sum_probs=17.2
Q ss_pred HHHHhcCCeEEEEecCCccCCC
Q 003029 584 ERYLRSNNRLLILGFNATLTEP 605 (856)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~ 605 (856)
.+-...+.++|+||+||||++.
T Consensus 33 ~~~~~~~~k~VIFDlDGTLvDS 54 (286)
T PLN02779 33 SASASALPEALLFDCDGVLVET 54 (286)
T ss_pred hhccccCCcEEEEeCceeEEcc
Confidence 3334456789999999999987
No 390
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=22.71 E-value=2.1e+02 Score=28.78 Aligned_cols=103 Identities=13% Similarity=0.108 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCC-CCCCCeEEEEcCcEEEEEeCCCCHHH
Q 003029 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP-ISNASVEVVQGSKSVEVRAVGVTKGA 771 (856)
Q Consensus 693 ~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~-~~~~~v~v~~g~~~vEV~p~gvnKG~ 771 (856)
..+..|++...+ .| ..+...=+...|+. |+++++.| .-. .....+....--.++||.|. +|-.
T Consensus 48 pdv~~iL~~L~~--~g-------v~lavASRt~~P~~----A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g--sK~~ 111 (169)
T PF12689_consen 48 PDVPEILQELKE--RG-------VKLAVASRTDEPDW----ARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG--SKTT 111 (169)
T ss_dssp TTHHHHHHHHHH--CT---------EEEEE--S-HHH----HHHHHHHT-T-C----------CCECEEEESSS---HHH
T ss_pred cCHHHHHHHHHH--CC-------CEEEEEECCCChHH----HHHHHHhc-CCCccccccccchhhcchhheecC--chHH
Confidence 446666666654 23 33333334444554 56777776 211 00111112222356999985 9999
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
=.+.|.++.| ++++.++.|=|...|.++. ...|+ .|.|.+
T Consensus 112 Hf~~i~~~tg------I~y~eMlFFDDe~~N~~~v-----~~lGV~~v~v~~ 152 (169)
T PF12689_consen 112 HFRRIHRKTG------IPYEEMLFFDDESRNIEVV-----SKLGVTCVLVPD 152 (169)
T ss_dssp HHHHHHHHH---------GGGEEEEES-HHHHHHH-----HTTT-EEEE-SS
T ss_pred HHHHHHHhcC------CChhHEEEecCchhcceee-----EecCcEEEEeCC
Confidence 9999999998 7899999999955554444 33554 455655
No 391
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=22.55 E-value=85 Score=33.22 Aligned_cols=39 Identities=18% Similarity=0.136 Sum_probs=32.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+-|.+.+.|+.|.+ .|+.++|+||.+...++..+..++
T Consensus 99 ~~~pg~~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~~~g 137 (253)
T TIGR01422 99 SPIPGVIEVIAYLRA-RGIKIGSTTGYTREMMDVVAPEAA 137 (253)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHHHH
Confidence 345678999999986 699999999999999888877654
No 392
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=22.43 E-value=1.7e+02 Score=37.45 Aligned_cols=41 Identities=24% Similarity=0.215 Sum_probs=36.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
..|-+++.++|++|.+ .|++|+++||-.........+++++
T Consensus 549 Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 549 DPPKETTAPALKALKA-SGVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred CcchhhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3577899999999986 7999999999999999998888876
No 393
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.24 E-value=7.7e+02 Score=26.77 Aligned_cols=42 Identities=5% Similarity=-0.041 Sum_probs=25.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEE-cCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVL-SGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~-SGR~~~~l~~~~~~l~l 662 (856)
..|+++.+..|.++.++.++.++++ +.-+...++.+.+..+.
T Consensus 210 ~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 210 IDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 4577765555555555567776665 55566666666655543
No 394
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=21.96 E-value=1.3e+02 Score=32.25 Aligned_cols=59 Identities=7% Similarity=-0.167 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCc-ceEEeCCC-------------CccccCCHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTI-STVRLDSS-------------FLHYLRMKMC 833 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~-~~v~V~~~-------------~~~~l~~~~~ 833 (856)
+-...+.++++++ .+++.++.||| +. +|+.+ ++..| -+|.|... ..|.+.+..+
T Consensus 181 ~p~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~----a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~e 249 (257)
T TIGR01458 181 SKTFFLEALRATG------CEPEEAVMIGD-DCRDDVGG----AQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPH 249 (257)
T ss_pred CHHHHHHHHHHhC------CChhhEEEECC-CcHHHHHH----HHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHH
Confidence 3456777888887 56899999999 85 88766 43333 45666321 1166777777
Q ss_pred HHHHH
Q 003029 834 MRFLS 838 (856)
Q Consensus 834 ~~~~l 838 (856)
+..++
T Consensus 250 l~~~l 254 (257)
T TIGR01458 250 AVDLI 254 (257)
T ss_pred HHHHH
Confidence 66543
No 395
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=21.78 E-value=6.4e+02 Score=26.85 Aligned_cols=101 Identities=22% Similarity=0.253 Sum_probs=56.6
Q ss_pred cCCceEEEeeccccc-------CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003029 361 AGRKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (856)
Q Consensus 361 ~~~~iIl~V~Rld~~-------KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (856)
.++++|+........ ......++.++.+.+.+|++. |++---|.......+ ..+.++. +
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~----lvvK~HP~~~~~~~~----~~~~~~~---~--- 180 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAK----LVVKPHPDERGGNKY----SYLEELP---N--- 180 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCE----EEEEECchhhCCCCh----hHhhhhh---c---
Confidence 356667766665554 244567777788888899764 443333321111111 1111111 1
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHccEEE-ECCCCcCCChhHHHHHhhcCCCCceEEE
Q 003029 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVAL-VTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (856)
Q Consensus 434 g~~~~~pV~~~~g~v~~~el~aly~~ADv~v-~~S~~EG~~Lv~lEama~~~~~~g~lVl 492 (856)
...+.++.... .+..|+..||..+ ++| .|.+||+..+ .|||+
T Consensus 181 ----~~~~~~~~~~~---~~~~Ll~~s~~VvtinS------tvGlEAll~g----kpVi~ 223 (269)
T PF05159_consen 181 ----LPNVVIIDDDV---NLYELLEQSDAVVTINS------TVGLEALLHG----KPVIV 223 (269)
T ss_pred ----CCCeEEECCCC---CHHHHHHhCCEEEEECC------HHHHHHHHcC----CceEE
Confidence 11344444444 4667788899766 455 5899999984 66665
No 396
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=21.47 E-value=6.4e+02 Score=26.70 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=37.9
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH-HccEEEEC
Q 003029 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA-VTDVALVT 466 (856)
Q Consensus 399 v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~-~ADv~v~~ 466 (856)
.+|++...|..++..-.....+.++++.+.++.+ + +.-.+...|.++.+.+..+.. .||++|+-
T Consensus 133 ~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~-~---~~~~IeVDGGI~~~~i~~~~~aGad~~V~G 197 (229)
T PRK09722 133 KITVMTVDPGFAGQPFIPEMLDKIAELKALRERN-G---LEYLIEVDGSCNQKTYEKLMEAGADVFIVG 197 (229)
T ss_pred EEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhc-C---CCeEEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 5688888887665443333444555444333321 2 112344689999888877765 37888766
No 397
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=20.94 E-value=1.1e+02 Score=32.32 Aligned_cols=39 Identities=8% Similarity=-0.053 Sum_probs=32.8
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+-|.+.+.|+.|.+ .|+.++|+|+.+...++..+..+++
T Consensus 109 l~pgv~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~gl 147 (248)
T PLN02770 109 PLNGLYKLKKWIED-RGLKRAAVTNAPRENAELMISLLGL 147 (248)
T ss_pred cCccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 44568889999975 6999999999999999988888753
No 398
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=20.83 E-value=1.9e+02 Score=30.01 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=45.1
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--CceEEeeCceEEEecCCeeeecccccCChHHH-HHHHHHH
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV-DSLKHVF 699 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~-~~v~~i~ 699 (856)
=.+.+.+..+.-.+++.+..++.|||......+.+..+ .-+| ..|...+++.++.+..++ +.| .-+..++
T Consensus 55 WNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L-~Fd~v~LKp~~~~~~sTm------~fK~~~l~~ll 127 (197)
T PF10307_consen 55 WNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGL-EFDAVCLKPENQRFSSTM------DFKQAFLEDLL 127 (197)
T ss_pred hhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCC-CccEEEeCcccccCcccc------HHHHHHHHHHH
Confidence 34567777777778889999999999976555555544 1122 134444554333443332 344 4567778
Q ss_pred HHHH
Q 003029 700 EYFT 703 (856)
Q Consensus 700 ~~~~ 703 (856)
+.|.
T Consensus 128 ~~Y~ 131 (197)
T PF10307_consen 128 HTYK 131 (197)
T ss_pred HhcC
Confidence 8775
No 399
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=20.63 E-value=47 Score=32.94 Aligned_cols=15 Identities=7% Similarity=0.399 Sum_probs=13.6
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
+|+|+||+||||++.
T Consensus 1 ~~~iiFD~DGTL~ds 15 (185)
T TIGR02009 1 YKAVIFDMDGVIVDT 15 (185)
T ss_pred CCeEEEcCCCcccCC
Confidence 478999999999987
No 400
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=20.61 E-value=3.6e+02 Score=23.65 Aligned_cols=74 Identities=19% Similarity=0.241 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHc--cEEEECC-CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAVT--DVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~A--Dv~v~~S-~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVnP~d~~~lA~a 520 (856)
+.++....+... |++++-- .-++=++-.++.+.........+++|......... |-.+++.-|.+.+++.++
T Consensus 31 ~~~~~~~~~~~~~~d~iiid~~~~~~~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 110 (112)
T PF00072_consen 31 SGEEALELLKKHPPDLIIIDLELPDGDGLELLEQIRQINPSIPIIVVTDEDDSDEVQEALRAGADDYLSKPFSPEELRAA 110 (112)
T ss_dssp SHHHHHHHHHHSTESEEEEESSSSSSBHHHHHHHHHHHTTTSEEEEEESSTSHHHHHHHHHTTESEEEESSSSHHHHHHH
T ss_pred CHHHHHHHhcccCceEEEEEeeeccccccccccccccccccccEEEecCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHh
Confidence 344444444433 5555543 33444555666665444345566677665533322 668999999999999988
Q ss_pred HH
Q 003029 521 IA 522 (856)
Q Consensus 521 i~ 522 (856)
|+
T Consensus 111 i~ 112 (112)
T PF00072_consen 111 IN 112 (112)
T ss_dssp HH
T ss_pred hC
Confidence 74
No 401
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=20.49 E-value=1.2e+02 Score=32.95 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=34.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
++-|.+.+.|+.|.+ .|+.+.|+|+.....+...+..+++
T Consensus 142 ~l~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~gl 181 (273)
T PRK13225 142 QLFPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQGL 181 (273)
T ss_pred CcCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 355789999999985 6999999999999999998888764
No 402
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=20.45 E-value=1e+02 Score=29.93 Aligned_cols=54 Identities=9% Similarity=0.187 Sum_probs=33.2
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC--CHhhHHHHhccc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS--DRNVLDKNFQEY 660 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR--~~~~l~~~~~~l 660 (856)
-+-++|+||.|+.-.. ...+ ..-+.++.+.+ -|..|+|+|-- +.+.++++-..+
T Consensus 44 giAildL~G~~l~l~S------------~R~~--~~~evi~~I~~-~G~PviVAtDV~p~P~~V~Kia~~f 99 (138)
T PF04312_consen 44 GIAILDLDGELLDLKS------------SRNM--SRSEVIEWISE-YGKPVIVATDVSPPPETVKKIARSF 99 (138)
T ss_pred EEEEEecCCcEEEEEe------------ecCC--CHHHHHHHHHH-cCCEEEEEecCCCCcHHHHHHHHHh
Confidence 3557899999886521 1222 23455555554 58899999965 445566655544
No 403
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=20.40 E-value=87 Score=32.89 Aligned_cols=57 Identities=9% Similarity=-0.067 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCCC-----CccccCCHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSS-----FLHYLRMKMCMRF 836 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~-----~~~~l~~~~~~~~ 836 (856)
-.|.++.++..|++ ++..++.|-| +.+.+.- ++..| -||.|+-+ +.|.|...-++..
T Consensus 163 ~~afE~a~k~agi~-----~p~~t~FfDD-S~~NI~~----ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~ 225 (244)
T KOG3109|consen 163 EEAFEKAMKVAGID-----SPRNTYFFDD-SERNIQT----AKEVGLKTVLVGREHKIKGVDYALEQIHNNKE 225 (244)
T ss_pred HHHHHHHHHHhCCC-----CcCceEEEcC-chhhHHH----HHhccceeEEEEeeecccchHHHHHHhhchhh
Confidence 35778888888842 3889999999 8877554 44433 34444332 2266655554443
No 404
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=20.36 E-value=2.9e+02 Score=29.22 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=43.9
Q ss_pred chHHHHHHHHh-c-CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC-CCHhhHH
Q 003029 578 READSIERYLR-S-NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG-SDRNVLD 654 (856)
Q Consensus 578 ~~~~~~~~y~~-s-~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~ 654 (856)
|...+.+.|.. . -..|.++|+||+.-.. +...+.|+++++..+..|.+-=| |+.+.++
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~~-------------------~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~ 92 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQH-------------------AREFDYIKSLRRLTTKDIEVGGGIRTKSQIM 92 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccCC-------------------cchHHHHHHHHhhcCCeEEEcCCcCCHHHHH
Confidence 55668888887 3 4889999999986433 24567777777655566666555 5777777
Q ss_pred HHhc
Q 003029 655 KNFQ 658 (856)
Q Consensus 655 ~~~~ 658 (856)
+++.
T Consensus 93 ~~l~ 96 (234)
T PRK13587 93 DYFA 96 (234)
T ss_pred HHHH
Confidence 7775
No 405
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=20.18 E-value=5.5e+02 Score=27.06 Aligned_cols=76 Identities=21% Similarity=0.229 Sum_probs=47.7
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH-HHcc
Q 003029 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY-AVTD 461 (856)
Q Consensus 383 ~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly-~~AD 461 (856)
.+++.++.+- .++|++-..|..++..--....+.++++-.-+..+ + ...+-..|.++.+....+. ..||
T Consensus 123 ~~i~~~l~~v-----D~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~----~-~~~IeVDGGI~~~t~~~~~~AGad 192 (220)
T COG0036 123 EALEPVLDDV-----DLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDER----L-DILIEVDGGINLETIKQLAAAGAD 192 (220)
T ss_pred HHHHHHHhhC-----CEEEEEeECCCCcccccCHHHHHHHHHHHHHhccc----C-CeEEEEeCCcCHHHHHHHHHcCCC
Confidence 4455555542 36788888888776543344455555554444332 1 1244468999999888887 6789
Q ss_pred EEEECCC
Q 003029 462 VALVTSL 468 (856)
Q Consensus 462 v~v~~S~ 468 (856)
++|.-|.
T Consensus 193 ~~VaGSa 199 (220)
T COG0036 193 VFVAGSA 199 (220)
T ss_pred EEEEEEE
Confidence 8887774
No 406
>PLN03007 UDP-glucosyltransferase family protein
Probab=20.02 E-value=5.9e+02 Score=30.02 Aligned_cols=74 Identities=15% Similarity=0.029 Sum_probs=44.4
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-----CCCch---hhccCCeEEEC------
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----FAGAA---QSLGAGAILVN------ 510 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-----~aG~~---~~lg~~g~lVn------ 510 (856)
.+.+|+.+ ++..+++.++-+ .-|+| ..+|+++++ .|+|+-- +..+. +.+ .-|+-+.
T Consensus 350 ~~w~PQ~~---iL~h~~v~~fvt-H~G~n-S~~Eal~~G----VP~v~~P~~~DQ~~na~~~~~~~-~~G~~~~~~~~~~ 419 (482)
T PLN03007 350 RGWAPQVL---ILDHQATGGFVT-HCGWN-SLLEGVAAG----LPMVTWPVGAEQFYNEKLVTQVL-RTGVSVGAKKLVK 419 (482)
T ss_pred ecCCCHHH---HhccCccceeee-cCcch-HHHHHHHcC----CCeeeccchhhhhhhHHHHHHhh-cceeEeccccccc
Confidence 57888865 556666644433 36776 578999983 4554432 22222 222 2233331
Q ss_pred ---C-CCHHHHHHHHHHHHcCC
Q 003029 511 ---P-WNITEVANAIARALNMS 528 (856)
Q Consensus 511 ---P-~d~~~lA~ai~~aL~~~ 528 (856)
+ -+.+++++++.+++..+
T Consensus 420 ~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 420 VKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred cccCcccHHHHHHHHHHHhcCc
Confidence 1 37889999999999765
Done!