Query 003029
Match_columns 856
No_of_seqs 480 out of 3072
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 10:43:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5t_A Putative glycosyltransf 100.0 7E-103 2E-107 897.6 47.8 453 93-565 2-476 (496)
2 1uqt_A Alpha, alpha-trehalose- 100.0 6.3E-90 2.2E-94 797.4 45.0 449 94-562 2-454 (482)
3 3fro_A GLGA glycogen synthase; 100.0 1.2E-26 4.3E-31 262.1 33.3 313 211-563 99-431 (439)
4 3vue_A GBSS-I, granule-bound s 99.9 2.2E-25 7.6E-30 261.4 29.5 297 230-562 152-511 (536)
5 2qzs_A Glycogen synthase; glyc 99.9 4.2E-24 1.4E-28 246.4 32.6 300 231-564 129-478 (485)
6 2r60_A Glycosyl transferase, g 99.9 5.3E-25 1.8E-29 255.3 22.6 303 231-565 120-462 (499)
7 3c48_A Predicted glycosyltrans 99.9 4E-24 1.4E-28 242.7 28.5 295 231-565 122-428 (438)
8 1rzu_A Glycogen synthase 1; gl 99.9 9.4E-24 3.2E-28 243.5 30.7 299 231-563 130-476 (485)
9 1u02_A Trehalose-6-phosphate p 99.9 1.1E-24 3.6E-29 229.4 20.6 219 591-845 1-229 (239)
10 3okp_A GDP-mannose-dependent a 99.9 1.3E-23 4.4E-28 234.2 30.2 281 231-563 86-380 (394)
11 3s28_A Sucrose synthase 1; gly 99.9 2.9E-24 1E-28 260.8 22.9 311 231-562 407-769 (816)
12 2x6q_A Trehalose-synthase TRET 99.9 8.4E-24 2.9E-28 238.9 24.8 280 231-562 126-414 (416)
13 3oy2_A Glycosyltransferase B73 99.9 3.8E-23 1.3E-27 233.1 26.8 283 231-565 81-393 (413)
14 2jjm_A Glycosyl transferase, g 99.9 3.8E-23 1.3E-27 231.7 26.3 279 231-563 99-386 (394)
15 2gek_A Phosphatidylinositol ma 99.9 4.5E-23 1.5E-27 231.0 26.2 275 231-564 107-385 (406)
16 3nb0_A Glycogen [starch] synth 99.9 8.1E-22 2.8E-26 230.1 33.1 313 231-565 181-636 (725)
17 3f9r_A Phosphomannomutase; try 99.9 1.7E-22 5.9E-27 213.6 16.8 217 590-844 3-245 (246)
18 3dao_A Putative phosphatse; st 99.9 6.7E-22 2.3E-26 212.8 20.6 219 583-842 13-283 (283)
19 2bfw_A GLGA glycogen synthase; 99.9 3.4E-21 1.2E-25 195.1 23.2 190 331-546 2-199 (200)
20 2iuy_A Avigt4, glycosyltransfe 99.9 1.8E-21 6E-26 213.9 18.7 239 231-564 84-337 (342)
21 3l7y_A Putative uncharacterize 99.9 9.6E-21 3.3E-25 205.9 23.4 218 589-844 35-302 (304)
22 3pgv_A Haloacid dehalogenase-l 99.9 1.8E-21 6E-26 209.6 17.0 222 583-842 13-283 (285)
23 2iw1_A Lipopolysaccharide core 99.9 5E-22 1.7E-26 219.9 12.4 228 287-561 136-370 (374)
24 3dnp_A Stress response protein 99.9 3E-20 1E-24 199.8 24.1 221 590-848 5-280 (290)
25 4dw8_A Haloacid dehalogenase-l 99.8 2.5E-20 8.7E-25 199.2 20.9 221 589-843 3-270 (279)
26 2amy_A PMM 2, phosphomannomuta 99.8 9.3E-21 3.2E-25 199.7 15.5 206 588-822 3-233 (246)
27 2fue_A PMM 1, PMMH-22, phospho 99.8 9.7E-21 3.3E-25 201.7 15.7 208 583-822 5-242 (262)
28 1rlm_A Phosphatase; HAD family 99.8 1.4E-19 4.9E-24 193.3 22.1 214 590-843 2-264 (271)
29 1rkq_A Hypothetical protein YI 99.8 1E-19 3.4E-24 195.9 20.7 220 591-842 5-270 (282)
30 3mpo_A Predicted hydrolase of 99.8 6.1E-20 2.1E-24 196.3 17.6 216 590-843 4-270 (279)
31 2b30_A Pvivax hypothetical pro 99.8 3.1E-19 1.1E-23 194.2 21.8 221 589-843 25-298 (301)
32 1xvi_A MPGP, YEDP, putative ma 99.8 2.3E-19 8E-24 192.5 20.0 192 589-823 7-236 (275)
33 3fzq_A Putative hydrolase; YP_ 99.8 2.8E-19 9.5E-24 190.1 19.9 205 591-841 5-271 (274)
34 1nf2_A Phosphatase; structural 99.8 2E-19 6.7E-24 192.1 18.8 217 591-842 2-262 (268)
35 3r4c_A Hydrolase, haloacid deh 99.8 3.8E-19 1.3E-23 188.9 19.5 214 590-841 11-265 (268)
36 3qhp_A Type 1 capsular polysac 99.8 4.4E-19 1.5E-23 174.2 18.2 162 363-553 2-165 (166)
37 1l6r_A Hypothetical protein TA 99.8 2.3E-19 8E-24 187.2 16.7 208 590-842 4-225 (227)
38 2pq0_A Hypothetical conserved 99.8 7.7E-19 2.6E-23 185.8 20.9 211 590-841 2-254 (258)
39 1nrw_A Hypothetical protein, h 99.8 2.3E-18 7.7E-23 185.7 24.2 214 591-841 4-287 (288)
40 1s2o_A SPP, sucrose-phosphatas 99.8 1.4E-19 4.8E-24 190.7 14.0 190 592-823 4-206 (244)
41 2x0d_A WSAF; GT4 family, trans 99.8 7.2E-19 2.5E-23 199.7 20.7 161 327-529 218-381 (413)
42 2zos_A MPGP, mannosyl-3-phosph 99.8 4.3E-19 1.5E-23 187.5 16.9 185 591-824 2-225 (249)
43 1wr8_A Phosphoglycolate phosph 99.8 4.2E-18 1.4E-22 177.7 21.1 209 591-843 3-226 (231)
44 2rbk_A Putative uncharacterize 99.8 1.2E-18 4.2E-23 184.8 12.6 213 592-841 3-258 (261)
45 1vgv_A UDP-N-acetylglucosamine 99.8 8.5E-18 2.9E-22 187.2 18.8 279 227-559 83-373 (384)
46 3beo_A UDP-N-acetylglucosamine 99.8 7.1E-18 2.4E-22 187.0 18.1 269 232-557 96-371 (375)
47 2hy7_A Glucuronosyltransferase 99.8 1.9E-18 6.3E-23 195.8 12.8 240 231-558 124-373 (406)
48 3zx4_A MPGP, mannosyl-3-phosph 99.7 1.9E-17 6.4E-22 175.6 16.7 209 593-846 2-251 (259)
49 2f9f_A First mannosyl transfer 99.7 5.4E-17 1.8E-21 162.0 13.7 142 361-529 21-164 (177)
50 3gyg_A NTD biosynthesis operon 99.7 2.4E-16 8.3E-21 169.5 15.6 222 590-844 21-285 (289)
51 2vsy_A XCC0866; transferase, g 99.6 9.6E-16 3.3E-20 180.2 17.1 199 326-564 344-561 (568)
52 1v4v_A UDP-N-acetylglucosamine 99.6 2.6E-15 8.8E-20 166.9 16.4 252 225-537 86-343 (376)
53 1f0k_A MURG, UDP-N-acetylgluco 99.6 8.4E-15 2.9E-19 161.7 17.6 250 231-563 96-358 (364)
54 2xci_A KDO-transferase, 3-deox 99.6 1.1E-14 3.8E-19 163.0 18.6 249 225-546 106-363 (374)
55 3dzc_A UDP-N-acetylglucosamine 99.4 4.6E-12 1.6E-16 142.9 20.1 258 226-537 107-376 (396)
56 3ot5_A UDP-N-acetylglucosamine 99.3 2.4E-11 8.2E-16 137.3 19.5 253 226-536 110-369 (403)
57 3pdw_A Uncharacterized hydrola 99.1 7.5E-11 2.6E-15 124.7 6.9 187 590-812 5-221 (266)
58 1vjr_A 4-nitrophenylphosphatas 99.0 1.9E-10 6.5E-15 121.7 7.7 208 589-838 15-270 (271)
59 3qgm_A P-nitrophenyl phosphata 99.0 1.2E-10 4E-15 123.3 6.0 212 590-839 7-267 (268)
60 2x4d_A HLHPP, phospholysine ph 99.0 5.2E-11 1.8E-15 124.9 3.2 209 590-840 11-267 (271)
61 3rhz_A GTF3, nucleotide sugar 99.0 2.4E-08 8.1E-13 110.1 21.6 244 224-553 67-327 (339)
62 3epr_A Hydrolase, haloacid deh 99.0 1.4E-09 4.6E-14 115.1 9.7 195 590-822 4-228 (264)
63 1k1e_A Deoxy-D-mannose-octulos 98.9 4.3E-09 1.5E-13 105.0 12.8 142 589-843 6-157 (180)
64 2c4n_A Protein NAGD; nucleotid 98.9 3.7E-10 1.3E-14 116.4 2.0 46 759-812 168-214 (250)
65 1y8a_A Hypothetical protein AF 98.8 1.7E-11 5.8E-16 134.8 -11.2 210 585-846 15-284 (332)
66 4hwg_A UDP-N-acetylglucosamine 98.8 4.3E-07 1.5E-11 101.8 22.3 244 225-529 89-344 (385)
67 2p9j_A Hypothetical protein AQ 98.8 2.7E-08 9.2E-13 96.9 10.9 142 589-843 7-158 (162)
68 2r8e_A 3-deoxy-D-manno-octulos 98.7 1.1E-07 3.7E-12 95.5 12.4 147 586-845 21-177 (188)
69 3mmz_A Putative HAD family hyd 98.6 7.2E-08 2.5E-12 95.8 9.5 53 767-830 85-144 (176)
70 3e8m_A Acylneuraminate cytidyl 98.6 1.8E-07 6.1E-12 91.2 11.8 139 590-842 3-152 (164)
71 2ho4_A Haloacid dehalogenase-l 98.6 5.6E-07 1.9E-11 93.7 15.0 67 764-840 176-256 (259)
72 2obb_A Hypothetical protein; s 98.6 7.9E-08 2.7E-12 92.2 7.4 69 590-669 2-75 (142)
73 2oyc_A PLP phosphatase, pyrido 98.6 1.5E-07 5.3E-12 101.6 10.1 192 590-821 20-260 (306)
74 3n1u_A Hydrolase, HAD superfam 98.5 1.9E-07 6.4E-12 94.2 9.0 46 767-823 93-138 (191)
75 3ewi_A N-acylneuraminate cytid 98.5 6.9E-07 2.4E-11 88.3 12.0 66 768-844 83-158 (168)
76 3n07_A 3-deoxy-D-manno-octulos 98.5 1.5E-06 5.3E-11 87.9 14.7 143 589-844 23-175 (195)
77 3otg_A CALG1; calicheamicin, T 98.5 3.5E-06 1.2E-10 94.1 18.7 158 362-559 242-407 (412)
78 3mn1_A Probable YRBI family ph 98.4 8.8E-07 3E-11 89.0 11.1 46 767-823 93-138 (189)
79 2gj4_A Glycogen phosphorylase, 98.4 2E-05 6.9E-10 94.3 23.8 151 362-521 549-710 (824)
80 1l7m_A Phosphoserine phosphata 98.4 4E-07 1.4E-11 91.1 7.9 46 765-821 140-185 (211)
81 1l5w_A Maltodextrin phosphoryl 98.4 2E-05 6.8E-10 94.0 22.5 150 362-519 525-685 (796)
82 2c4m_A Glycogen phosphorylase; 98.4 1.2E-05 4.1E-10 95.9 20.5 150 362-518 515-677 (796)
83 3kd3_A Phosphoserine phosphohy 98.4 1.3E-06 4.6E-11 87.5 10.5 73 757-838 137-218 (219)
84 3ij5_A 3-deoxy-D-manno-octulos 98.3 1.5E-06 5.3E-11 89.0 10.6 67 767-844 123-199 (211)
85 3kzx_A HAD-superfamily hydrola 98.3 2.6E-06 8.8E-11 86.9 10.7 199 590-843 24-230 (231)
86 3tsa_A SPNG, NDP-rhamnosyltran 98.3 5.6E-06 1.9E-10 91.9 13.9 155 362-555 218-383 (391)
87 2wm8_A MDP-1, magnesium-depend 98.2 4.4E-06 1.5E-10 83.3 11.4 71 589-661 25-107 (187)
88 3l8h_A Putative haloacid dehal 98.2 2.3E-06 7.9E-11 84.3 9.3 54 591-650 1-54 (179)
89 4fzr_A SSFS6; structural genom 98.2 1E-05 3.5E-10 90.2 14.5 100 441-553 286-393 (398)
90 2pke_A Haloacid delahogenase-l 98.2 5.9E-07 2E-11 93.3 3.4 70 768-847 163-249 (251)
91 1xpj_A Hypothetical protein; s 98.2 1.9E-06 6.5E-11 80.9 6.2 53 591-652 1-53 (126)
92 3q3e_A HMW1C-like glycosyltran 98.2 2.7E-05 9.3E-10 91.1 17.0 172 363-563 441-624 (631)
93 3m9l_A Hydrolase, haloacid deh 98.1 3E-06 1E-10 85.1 6.7 64 766-840 126-197 (205)
94 2gmw_A D,D-heptose 1,7-bisphos 98.1 2.7E-06 9.3E-11 86.8 6.2 55 590-651 24-78 (211)
95 3u26_A PF00702 domain protein; 98.1 7.1E-07 2.4E-11 90.9 1.8 69 766-842 154-230 (234)
96 3mc1_A Predicted phosphatase, 98.1 1.3E-06 4.3E-11 88.7 3.5 70 763-840 138-216 (226)
97 3m1y_A Phosphoserine phosphata 98.1 9.7E-06 3.3E-10 81.6 10.1 47 764-821 138-184 (217)
98 4ex6_A ALNB; modified rossman 98.1 3.2E-06 1.1E-10 86.4 6.5 70 763-840 156-234 (237)
99 2hcf_A Hydrolase, haloacid deh 98.1 3E-07 1E-11 93.8 -1.9 208 590-843 3-230 (234)
100 1yv9_A Hydrolase, haloacid deh 98.0 8.6E-06 2.9E-10 85.4 8.7 67 590-672 4-79 (264)
101 2no4_A (S)-2-haloacid dehaloge 98.0 6E-06 2.1E-10 84.9 6.8 66 767-842 161-236 (240)
102 3d6j_A Putative haloacid dehal 98.0 1.1E-07 3.9E-12 95.8 -7.0 70 764-843 142-222 (225)
103 3vay_A HAD-superfamily hydrola 98.0 2.9E-07 1E-11 93.7 -4.2 67 765-841 153-229 (230)
104 3s2u_A UDP-N-acetylglucosamine 97.9 0.0003 1E-08 77.9 19.1 146 364-543 182-339 (365)
105 3ddh_A Putative haloacid dehal 97.9 5.9E-06 2E-10 83.5 4.5 62 767-838 157-233 (234)
106 3dv9_A Beta-phosphoglucomutase 97.9 1.5E-06 5.1E-11 89.3 -0.1 72 764-845 162-244 (247)
107 2om6_A Probable phosphoserine 97.9 8.7E-07 3E-11 90.0 -2.2 64 767-841 158-232 (235)
108 3umc_A Haloacid dehalogenase; 97.9 3.3E-06 1.1E-10 87.2 2.1 69 761-839 167-251 (254)
109 2iyf_A OLED, oleandomycin glyc 97.8 6.7E-05 2.3E-09 84.3 12.1 103 441-556 285-395 (430)
110 2o2x_A Hypothetical protein; s 97.8 4.3E-06 1.5E-10 85.5 1.6 55 590-651 30-84 (218)
111 3qxg_A Inorganic pyrophosphata 97.8 1.9E-06 6.5E-11 88.9 -1.4 68 764-841 163-241 (243)
112 3nuq_A Protein SSM1, putative 97.7 8.6E-07 2.9E-11 94.0 -5.1 68 764-840 201-280 (282)
113 3e58_A Putative beta-phosphogl 97.7 4.4E-05 1.5E-09 75.8 7.7 61 766-836 144-212 (214)
114 3skx_A Copper-exporting P-type 97.7 9.1E-05 3.1E-09 77.6 10.6 57 768-840 194-259 (280)
115 3fvv_A Uncharacterized protein 97.7 0.00026 9E-09 72.0 13.5 46 767-823 158-206 (232)
116 2o6l_A UDP-glucuronosyltransfe 97.7 0.00012 4.2E-09 71.4 9.9 124 362-528 21-155 (170)
117 1te2_A Putative phosphatase; s 97.7 3.4E-05 1.2E-09 77.5 5.6 37 768-812 151-187 (226)
118 2wf7_A Beta-PGM, beta-phosphog 97.6 6.8E-06 2.3E-10 82.6 -0.8 67 767-843 145-218 (221)
119 1zrn_A L-2-haloacid dehalogena 97.5 6.2E-05 2.1E-09 76.6 5.3 70 765-844 149-228 (232)
120 1qq5_A Protein (L-2-haloacid d 97.5 0.00024 8.3E-09 73.6 9.7 70 765-844 145-247 (253)
121 2p6p_A Glycosyl transferase; X 97.5 0.0013 4.4E-08 72.5 15.8 137 363-544 211-362 (384)
122 1nnl_A L-3-phosphoserine phosp 97.4 0.00038 1.3E-08 70.5 9.9 58 768-838 157-223 (225)
123 1zjj_A Hypothetical protein PH 97.4 5.2E-05 1.8E-09 79.7 2.9 67 591-673 1-75 (263)
124 2qlt_A (DL)-glycerol-3-phospha 97.4 9.2E-06 3.2E-10 85.9 -3.1 41 764-812 167-214 (275)
125 2i33_A Acid phosphatase; HAD s 97.4 5.9E-05 2E-09 79.7 3.1 72 589-661 57-142 (258)
126 4eze_A Haloacid dehalogenase-l 97.2 0.00096 3.3E-08 72.4 10.6 44 768-822 246-289 (317)
127 2ah5_A COG0546: predicted phos 97.2 0.00031 1.1E-08 70.7 5.7 65 764-838 134-209 (210)
128 3a1c_A Probable copper-exporti 97.1 0.0012 4.2E-08 70.2 9.5 71 580-662 132-202 (287)
129 3n28_A Phosphoserine phosphata 97.1 0.0074 2.5E-07 65.6 15.9 67 767-844 244-318 (335)
130 2pr7_A Haloacid dehalogenase/e 97.0 0.00028 9.6E-09 65.3 3.1 54 591-660 2-55 (137)
131 2yjn_A ERYCIII, glycosyltransf 97.0 0.0045 1.5E-07 69.8 13.6 148 363-553 268-428 (441)
132 2hx1_A Predicted sugar phospha 96.9 0.00058 2E-08 72.3 4.9 58 589-662 12-72 (284)
133 3j08_A COPA, copper-exporting 96.9 0.0016 5.4E-08 77.7 8.7 72 579-662 425-496 (645)
134 3p96_A Phosphoserine phosphata 96.9 0.0015 5.1E-08 73.5 8.0 45 767-822 322-366 (415)
135 3ia7_A CALG4; glycosysltransfe 96.9 0.0038 1.3E-07 68.8 11.1 106 441-559 283-397 (402)
136 2oda_A Hypothetical protein ps 96.8 0.001 3.5E-08 66.9 5.1 67 589-657 4-70 (196)
137 3ib6_A Uncharacterized protein 96.7 0.0027 9.3E-08 63.0 7.5 72 590-662 2-76 (189)
138 3rsc_A CALG2; TDP, enediyne, s 96.6 0.015 5E-07 64.7 13.6 105 441-558 299-411 (415)
139 3oti_A CALG3; calicheamicin, T 96.6 0.0071 2.4E-07 67.0 11.0 150 362-555 232-392 (398)
140 3j09_A COPA, copper-exporting 96.5 0.0095 3.3E-07 71.9 11.5 72 579-662 503-574 (723)
141 3rfu_A Copper efflux ATPase; a 96.4 0.003 1E-07 76.2 6.5 71 580-662 523-593 (736)
142 2fdr_A Conserved hypothetical 96.3 0.0014 4.8E-08 65.9 2.6 74 764-847 138-228 (229)
143 2fpr_A Histidine biosynthesis 96.3 0.0043 1.5E-07 61.0 5.8 72 587-662 10-96 (176)
144 3nvb_A Uncharacterized protein 96.2 0.0033 1.1E-07 69.8 4.7 81 578-659 209-292 (387)
145 1swv_A Phosphonoacetaldehyde h 95.9 0.0033 1.1E-07 65.1 3.1 71 763-841 156-259 (267)
146 2b82_A APHA, class B acid phos 95.9 0.0021 7.1E-08 65.4 1.5 60 590-650 36-115 (211)
147 3h4t_A Glycosyltransferase GTF 95.9 0.27 9.1E-06 54.6 18.8 136 362-543 221-365 (404)
148 3pct_A Class C acid phosphatas 95.9 0.003 1E-07 66.3 2.6 73 589-662 56-144 (260)
149 3ocu_A Lipoprotein E; hydrolas 95.6 0.0045 1.5E-07 65.1 2.7 73 589-662 56-144 (262)
150 4gyw_A UDP-N-acetylglucosamine 95.5 0.3 1E-05 58.9 18.6 173 364-565 524-708 (723)
151 2i7d_A 5'(3')-deoxyribonucleot 95.3 0.0061 2.1E-07 60.5 2.3 31 622-653 73-104 (193)
152 2pib_A Phosphorylated carbohyd 95.3 0.0056 1.9E-07 60.4 1.9 69 764-842 137-216 (216)
153 1iir_A Glycosyltransferase GTF 95.2 0.11 3.6E-06 57.9 12.4 122 362-527 238-368 (415)
154 3iru_A Phoshonoacetaldehyde hy 95.1 0.012 4E-07 60.9 3.8 72 763-844 164-270 (277)
155 3ixz_A Potassium-transporting 95.0 0.06 2.1E-06 67.5 10.7 40 621-661 603-642 (1034)
156 3zvl_A Bifunctional polynucleo 94.9 0.015 5.1E-07 65.5 4.3 58 589-649 56-113 (416)
157 3umg_A Haloacid dehalogenase; 94.8 0.013 4.6E-07 59.4 3.4 68 764-841 166-249 (254)
158 3um9_A Haloacid dehalogenase, 94.8 0.034 1.2E-06 55.6 6.2 66 767-842 152-227 (230)
159 2go7_A Hydrolase, haloacid deh 94.7 0.012 4.3E-07 57.3 2.5 63 766-839 137-205 (207)
160 2pib_A Phosphorylated carbohyd 94.5 0.054 1.8E-06 53.1 6.8 41 621-662 83-123 (216)
161 3umb_A Dehalogenase-like hydro 94.5 0.031 1.1E-06 56.1 5.1 63 769-841 157-229 (233)
162 2iya_A OLEI, oleandomycin glyc 94.5 0.58 2E-05 51.8 16.0 94 441-548 307-408 (424)
163 3kc2_A Uncharacterized protein 94.4 0.029 1E-06 61.6 5.0 54 589-658 11-67 (352)
164 4ap9_A Phosphoserine phosphata 94.2 0.032 1.1E-06 54.4 4.4 63 762-841 134-199 (201)
165 2hoq_A Putative HAD-hydrolase 94.1 0.017 5.8E-07 58.8 2.0 79 765-854 148-239 (241)
166 3s6j_A Hydrolase, haloacid deh 94.0 0.014 4.9E-07 58.4 1.4 68 764-841 144-222 (233)
167 4eek_A Beta-phosphoglucomutase 93.7 0.037 1.3E-06 56.8 3.8 67 765-841 166-247 (259)
168 3iru_A Phoshonoacetaldehyde hy 93.5 0.092 3.2E-06 54.0 6.5 38 622-660 111-148 (277)
169 2w43_A Hypothetical 2-haloalka 93.3 0.035 1.2E-06 54.7 2.7 61 769-841 130-200 (201)
170 3um9_A Haloacid dehalogenase, 93.1 0.027 9.2E-07 56.3 1.6 17 589-605 3-19 (230)
171 2b0c_A Putative phosphatase; a 93.0 0.03 1E-06 55.1 1.7 41 771-822 152-193 (206)
172 3s6j_A Hydrolase, haloacid deh 92.8 0.09 3.1E-06 52.4 5.0 39 622-661 91-129 (233)
173 3sd7_A Putative phosphatase; s 92.8 0.049 1.7E-06 55.2 3.0 66 763-838 162-239 (240)
174 3kbb_A Phosphorylated carbohyd 92.6 0.18 6.2E-06 50.0 6.8 60 772-842 145-216 (216)
175 3qnm_A Haloacid dehalogenase-l 92.3 0.075 2.6E-06 53.2 3.6 66 764-839 159-233 (240)
176 3smv_A S-(-)-azetidine-2-carbo 92.2 0.074 2.5E-06 53.1 3.5 70 762-842 148-238 (240)
177 3nas_A Beta-PGM, beta-phosphog 92.0 0.065 2.2E-06 53.8 2.7 73 764-846 143-221 (233)
178 1rrv_A Glycosyltransferase GTF 91.7 0.56 1.9E-05 51.9 10.3 122 362-527 237-369 (416)
179 2hdo_A Phosphoglycolate phosph 91.6 0.029 9.9E-07 55.5 -0.4 62 766-837 135-207 (209)
180 4amg_A Snogd; transferase, pol 91.3 0.22 7.6E-06 54.5 6.3 88 444-546 292-385 (400)
181 2hi0_A Putative phosphoglycola 91.2 0.096 3.3E-06 53.3 2.9 65 764-838 162-237 (240)
182 3ed5_A YFNB; APC60080, bacillu 90.9 0.11 3.9E-06 51.9 3.2 66 765-840 156-232 (238)
183 2i6x_A Hydrolase, haloacid deh 90.9 0.18 6.3E-06 49.6 4.7 34 770-811 153-186 (211)
184 1rku_A Homoserine kinase; phos 90.5 0.29 9.8E-06 48.2 5.7 64 764-842 129-200 (206)
185 2fi1_A Hydrolase, haloacid deh 90.1 0.072 2.5E-06 51.5 0.8 38 764-811 134-171 (190)
186 2nyv_A Pgpase, PGP, phosphogly 89.8 0.1 3.4E-06 52.5 1.6 64 767-840 139-210 (222)
187 1swv_A Phosphonoacetaldehyde h 89.8 0.14 4.7E-06 52.6 2.7 30 590-633 5-35 (267)
188 4dcc_A Putative haloacid dehal 89.7 0.45 1.5E-05 47.6 6.5 42 770-822 176-218 (229)
189 2go7_A Hydrolase, haloacid deh 89.7 0.08 2.7E-06 51.4 0.7 31 590-634 3-33 (207)
190 3umb_A Dehalogenase-like hydro 89.7 0.19 6.4E-06 50.2 3.5 16 590-605 3-18 (233)
191 2fdr_A Conserved hypothetical 89.6 0.1 3.6E-06 51.9 1.5 31 590-634 3-33 (229)
192 2fea_A 2-hydroxy-3-keto-5-meth 88.8 0.28 9.4E-06 49.8 4.1 73 766-853 149-230 (236)
193 3ed5_A YFNB; APC60080, bacillu 88.8 0.11 3.7E-06 52.1 0.9 32 589-634 5-36 (238)
194 3umg_A Haloacid dehalogenase; 88.6 0.11 3.7E-06 52.5 0.9 32 589-634 13-44 (254)
195 2hhl_A CTD small phosphatase-l 88.5 0.35 1.2E-05 48.3 4.5 72 588-661 25-105 (195)
196 3k1z_A Haloacid dehalogenase-l 88.3 0.25 8.6E-06 51.0 3.5 70 765-844 159-241 (263)
197 3nas_A Beta-PGM, beta-phosphog 88.3 0.11 3.9E-06 51.9 0.8 31 590-634 1-31 (233)
198 3l5k_A Protein GS1, haloacid d 87.7 0.14 4.8E-06 52.1 1.0 64 764-837 168-242 (250)
199 3l5k_A Protein GS1, haloacid d 87.7 0.061 2.1E-06 54.9 -1.8 32 589-634 28-59 (250)
200 2ght_A Carboxy-terminal domain 87.6 0.36 1.2E-05 47.5 3.9 71 589-661 13-92 (181)
201 3qnm_A Haloacid dehalogenase-l 87.6 0.14 4.7E-06 51.2 0.9 16 590-605 4-19 (240)
202 4eek_A Beta-phosphoglucomutase 86.7 0.17 5.7E-06 51.8 0.9 32 589-634 26-57 (259)
203 3smv_A S-(-)-azetidine-2-carbo 86.1 0.16 5.4E-06 50.7 0.3 17 589-605 4-20 (240)
204 2hdo_A Phosphoglycolate phosph 85.2 0.19 6.5E-06 49.4 0.4 16 590-605 3-18 (209)
205 3i28_A Epoxide hydrolase 2; ar 85.0 0.46 1.6E-05 53.7 3.5 34 622-656 100-139 (555)
206 1ltq_A Polynucleotide kinase; 84.7 1.1 3.7E-05 47.3 6.1 59 590-651 158-216 (301)
207 2fi1_A Hydrolase, haloacid deh 84.6 0.29 9.8E-06 47.2 1.3 31 590-634 5-35 (190)
208 2hoq_A Putative HAD-hydrolase 84.5 0.24 8.3E-06 50.0 0.8 32 591-636 2-33 (241)
209 3cnh_A Hydrolase family protei 84.3 0.53 1.8E-05 45.8 3.2 36 768-811 142-177 (200)
210 2w43_A Hypothetical 2-haloalka 84.1 0.71 2.4E-05 45.1 4.0 14 592-605 2-15 (201)
211 3sd7_A Putative phosphatase; s 83.3 0.28 9.5E-06 49.4 0.6 15 591-605 29-43 (240)
212 2hi0_A Putative phosphoglycola 82.1 0.33 1.1E-05 49.2 0.6 15 591-605 4-18 (240)
213 2gfh_A Haloacid dehalogenase-l 81.6 1.3 4.5E-05 45.6 5.1 63 769-842 178-253 (260)
214 1rku_A Homoserine kinase; phos 81.3 0.85 2.9E-05 44.6 3.3 14 591-604 2-15 (206)
215 2hsz_A Novel predicted phospha 81.2 0.39 1.3E-05 48.9 0.8 44 768-821 171-214 (243)
216 2p11_A Hypothetical protein; p 80.2 0.48 1.6E-05 47.7 1.1 65 767-841 146-225 (231)
217 2fea_A 2-hydroxy-3-keto-5-meth 79.8 2.7 9.4E-05 42.2 6.7 35 623-658 78-112 (236)
218 1psw_A ADP-heptose LPS heptosy 79.8 13 0.00045 39.4 12.5 97 363-483 181-280 (348)
219 1ygp_A Yeast glycogen phosphor 79.1 40 0.0014 40.6 17.0 148 362-518 599-767 (879)
220 2hsz_A Novel predicted phospha 78.7 0.57 1.9E-05 47.6 1.1 17 589-605 21-37 (243)
221 4gib_A Beta-phosphoglucomutase 78.5 1.6 5.5E-05 44.5 4.5 62 770-842 173-241 (250)
222 2i6x_A Hydrolase, haloacid deh 78.2 0.71 2.4E-05 45.2 1.6 16 590-605 4-19 (211)
223 2gfh_A Haloacid dehalogenase-l 78.1 0.69 2.4E-05 47.8 1.5 17 589-605 16-32 (260)
224 1q92_A 5(3)-deoxyribonucleotid 77.9 0.84 2.9E-05 44.9 2.0 51 788-839 130-192 (197)
225 2zg6_A Putative uncharacterize 77.4 0.8 2.7E-05 45.6 1.7 60 770-842 153-218 (220)
226 2nyv_A Pgpase, PGP, phosphogly 76.6 0.6 2.1E-05 46.6 0.5 15 591-605 3-17 (222)
227 3k1z_A Haloacid dehalogenase-l 76.5 0.72 2.5E-05 47.4 1.1 15 591-605 1-15 (263)
228 3ef0_A RNA polymerase II subun 75.5 3.3 0.00011 45.6 6.1 77 582-660 9-111 (372)
229 3cnh_A Hydrolase family protei 75.5 0.97 3.3E-05 43.9 1.7 16 590-605 3-18 (200)
230 3qle_A TIM50P; chaperone, mito 75.0 2 6.9E-05 43.1 3.9 64 589-660 32-95 (204)
231 4gib_A Beta-phosphoglucomutase 74.8 1.5 5.3E-05 44.6 3.1 17 589-605 24-40 (250)
232 4g9b_A Beta-PGM, beta-phosphog 74.5 1.2 3.9E-05 45.4 2.0 62 770-842 152-222 (243)
233 4gxt_A A conserved functionall 74.2 0.87 3E-05 50.5 1.1 41 621-662 220-260 (385)
234 2b0c_A Putative phosphatase; a 74.1 0.96 3.3E-05 44.0 1.3 17 589-605 5-21 (206)
235 3kbb_A Phosphorylated carbohyd 74.1 1.8 6.2E-05 42.5 3.3 15 591-605 1-15 (216)
236 3bwv_A Putative 5'(3')-deoxyri 73.8 1.2 4.1E-05 42.9 1.9 44 791-841 129-178 (180)
237 4ap9_A Phosphoserine phosphata 72.3 1.1 3.7E-05 43.1 1.1 39 622-662 79-117 (201)
238 4dcc_A Putative haloacid dehal 72.0 1.3 4.5E-05 44.2 1.7 16 590-605 27-42 (229)
239 3n28_A Phosphoserine phosphata 71.1 1.8 6E-05 46.5 2.6 40 622-662 178-217 (335)
240 4fe3_A Cytosolic 5'-nucleotida 70.8 4.2 0.00014 42.7 5.4 40 621-661 140-179 (297)
241 3shq_A UBLCP1; phosphatase, hy 67.9 4.7 0.00016 43.4 5.0 62 590-660 139-200 (320)
242 2g80_A Protein UTR4; YEL038W, 63.8 2.5 8.7E-05 43.6 1.9 42 770-822 190-232 (253)
243 3ib6_A Uncharacterized protein 62.1 4.7 0.00016 39.1 3.4 43 769-821 99-142 (189)
244 4fe3_A Cytosolic 5'-nucleotida 59.4 5.7 0.00019 41.7 3.7 50 766-821 210-259 (297)
245 1yns_A E-1 enzyme; hydrolase f 57.9 3.6 0.00012 42.4 1.8 15 590-604 9-23 (261)
246 2p11_A Hypothetical protein; p 56.8 1.2 4.2E-05 44.6 -2.0 17 589-605 9-25 (231)
247 3a1c_A Probable copper-exporti 55.3 3.9 0.00013 42.7 1.6 57 767-839 212-277 (287)
248 3ar4_A Sarcoplasmic/endoplasmi 52.0 14 0.00047 46.0 5.9 40 622-662 603-642 (995)
249 3nvb_A Uncharacterized protein 51.0 5.6 0.00019 43.9 2.0 39 765-811 309-347 (387)
250 2zxe_A Na, K-ATPase alpha subu 46.6 18 0.0006 45.2 5.7 41 621-662 598-638 (1028)
251 2pr7_A Haloacid dehalogenase/e 44.9 7.7 0.00026 34.6 1.6 44 769-822 76-119 (137)
252 3hbm_A UDP-sugar hydrolase; PS 44.8 21 0.00072 37.5 5.1 34 451-493 217-250 (282)
253 2yj3_A Copper-transporting ATP 50.2 4.7 0.00016 41.6 0.0 29 789-822 197-225 (263)
254 2zg6_A Putative uncharacterize 40.9 28 0.00095 34.0 5.1 16 590-605 2-17 (220)
255 2oda_A Hypothetical protein ps 39.7 21 0.00072 34.9 4.0 64 770-843 90-188 (196)
256 3kcn_A Adenylate cyclase homol 38.2 1.7E+02 0.0058 26.0 9.9 78 449-526 35-122 (151)
257 1qkk_A DCTD, C4-dicarboxylate 37.5 1.9E+02 0.0064 25.8 10.2 77 450-526 36-120 (155)
258 3tov_A Glycosyl transferase fa 37.4 2.1E+02 0.0072 30.3 11.9 36 442-482 244-279 (349)
259 2zxe_A Na, K-ATPase alpha subu 37.3 20 0.00069 44.7 4.1 41 767-822 701-741 (1028)
260 3jte_A Response regulator rece 36.9 1.2E+02 0.004 26.8 8.4 78 449-526 35-122 (143)
261 3hzh_A Chemotaxis response reg 36.7 1.6E+02 0.0055 26.5 9.6 77 450-526 70-156 (157)
262 4gxt_A A conserved functionall 33.8 18 0.0006 39.8 2.5 47 766-821 295-341 (385)
263 4g9b_A Beta-PGM, beta-phosphog 33.8 28 0.00097 34.8 3.9 17 589-605 3-19 (243)
264 2vch_A Hydroquinone glucosyltr 33.7 2.5E+02 0.0086 31.2 12.3 109 445-563 344-471 (480)
265 1mhs_A Proton pump, plasma mem 33.3 14 0.00047 45.5 1.6 69 582-662 501-574 (920)
266 1dbw_A Transcriptional regulat 31.9 1.6E+02 0.0055 25.1 8.3 79 449-527 35-121 (126)
267 3eul_A Possible nitrate/nitrit 31.7 1.4E+02 0.0047 26.7 8.1 68 460-527 62-135 (152)
268 1mhs_A Proton pump, plasma mem 31.7 51 0.0017 40.5 6.3 45 761-822 609-653 (920)
269 4e7p_A Response regulator; DNA 31.6 1.3E+02 0.0044 26.9 7.9 67 461-527 68-140 (150)
270 3b2n_A Uncharacterized protein 30.6 2.6E+02 0.0089 24.1 10.9 78 449-526 37-122 (133)
271 3n53_A Response regulator rece 30.4 1.3E+02 0.0045 26.3 7.6 78 449-526 34-121 (140)
272 2pl1_A Transcriptional regulat 30.2 1.5E+02 0.0052 24.9 7.8 78 449-526 32-117 (121)
273 3hv2_A Response regulator/HD d 29.5 85 0.0029 28.2 6.2 78 449-526 46-132 (153)
274 2qv0_A Protein MRKE; structura 29.4 1.4E+02 0.0049 26.1 7.7 78 449-526 43-126 (143)
275 2r25_B Osmosensing histidine p 29.1 2.8E+02 0.0096 24.0 10.0 79 449-527 35-127 (133)
276 3a10_A Response regulator; pho 28.6 1.3E+02 0.0046 25.1 7.1 77 449-525 33-115 (116)
277 1tmy_A CHEY protein, TMY; chem 28.6 1.4E+02 0.0048 25.1 7.3 76 450-525 36-119 (120)
278 4as2_A Phosphorylcholine phosp 28.2 24 0.00082 37.9 2.3 38 622-660 143-180 (327)
279 2pln_A HP1043, response regula 28.1 2.2E+02 0.0077 24.6 8.7 74 449-526 50-132 (137)
280 3eod_A Protein HNR; response r 27.9 1.3E+02 0.0044 25.9 6.9 78 449-526 39-125 (130)
281 3ef1_A RNA polymerase II subun 27.9 59 0.002 36.3 5.4 76 583-660 18-119 (442)
282 3kto_A Response regulator rece 27.7 1.2E+02 0.0042 26.5 6.8 67 460-526 51-125 (136)
283 3f6c_A Positive transcription 27.4 1.2E+02 0.0041 26.2 6.7 68 459-526 46-119 (134)
284 3cnb_A DNA-binding response re 26.8 1.9E+02 0.0065 25.1 8.0 79 449-527 42-130 (143)
285 3b8c_A ATPase 2, plasma membra 26.7 61 0.0021 39.7 5.7 72 579-662 443-527 (885)
286 3hdg_A Uncharacterized protein 26.6 1E+02 0.0035 26.8 6.1 78 449-526 39-124 (137)
287 3crn_A Response regulator rece 26.5 1.5E+02 0.0053 25.6 7.3 78 449-526 35-120 (132)
288 2zay_A Response regulator rece 26.4 2E+02 0.0068 25.2 8.2 78 449-526 40-127 (147)
289 4dad_A Putative pilus assembly 26.1 1E+02 0.0035 27.3 6.0 68 459-526 67-140 (146)
290 3hdv_A Response regulator; PSI 26.0 1.9E+02 0.0066 24.9 7.9 79 449-527 39-127 (136)
291 1qo0_D AMIR; binding protein, 25.8 3.6E+02 0.012 25.1 10.4 67 459-526 52-124 (196)
292 3kht_A Response regulator; PSI 25.7 1.6E+02 0.0055 25.8 7.3 78 449-526 39-127 (144)
293 1mvo_A PHOP response regulator 25.4 2.2E+02 0.0074 24.5 8.0 79 450-528 36-122 (136)
294 3cfy_A Putative LUXO repressor 25.1 1.8E+02 0.0062 25.5 7.5 78 449-526 36-121 (137)
295 3snk_A Response regulator CHEY 24.8 1.2E+02 0.004 26.5 6.1 67 460-526 60-132 (135)
296 1zgz_A Torcad operon transcrip 23.8 2.5E+02 0.0087 23.5 8.1 76 449-525 34-117 (122)
297 3cu5_A Two component transcrip 23.6 1.7E+02 0.0059 25.7 7.1 78 449-526 37-122 (141)
298 3ar4_A Sarcoplasmic/endoplasmi 23.5 63 0.0021 40.1 5.1 63 761-840 679-750 (995)
299 4as2_A Phosphorylcholine phosp 22.9 39 0.0013 36.1 2.7 47 766-823 239-287 (327)
300 1i3c_A Response regulator RCP1 22.8 3.9E+02 0.013 23.5 9.5 77 449-525 42-135 (149)
301 3nhm_A Response regulator; pro 22.7 2.4E+02 0.0081 24.1 7.7 78 449-526 35-121 (133)
302 2qsj_A DNA-binding response re 22.6 1.8E+02 0.006 25.9 7.0 79 449-527 37-124 (154)
303 3gl9_A Response regulator; bet 22.6 2.7E+02 0.0092 23.7 8.0 78 449-526 34-121 (122)
304 2rdm_A Response regulator rece 22.3 2.6E+02 0.0089 23.8 7.9 80 449-528 37-124 (132)
305 1srr_A SPO0F, sporulation resp 22.0 2.2E+02 0.0077 24.0 7.3 78 449-526 35-120 (124)
306 3gt7_A Sensor protein; structu 21.5 2.8E+02 0.0097 24.7 8.2 78 449-526 39-126 (154)
307 3h5i_A Response regulator/sens 21.5 3.3E+02 0.011 23.7 8.5 77 449-526 37-123 (140)
308 1zjj_A Hypothetical protein PH 21.1 25 0.00085 35.7 0.7 59 769-840 189-262 (263)
309 1xhf_A DYE resistance, aerobic 20.9 2.5E+02 0.0085 23.6 7.4 77 449-526 35-119 (123)
310 2qxy_A Response regulator; reg 20.8 1.7E+02 0.0057 25.6 6.3 79 449-527 36-121 (142)
311 3cz5_A Two-component response 20.8 1.7E+02 0.0057 26.1 6.4 79 449-527 39-125 (153)
312 3lte_A Response regulator; str 20.5 3E+02 0.01 23.4 7.9 79 449-527 38-125 (132)
313 3r0j_A Possible two component 20.4 2.6E+02 0.0088 27.6 8.3 67 460-526 68-140 (250)
314 2qzj_A Two-component response 20.3 1.1E+02 0.0039 26.8 5.0 77 449-526 36-120 (136)
315 3h1g_A Chemotaxis protein CHEY 20.2 3.5E+02 0.012 23.0 8.3 68 460-527 52-127 (129)
No 1
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=100.00 E-value=7e-103 Score=897.56 Aligned_cols=453 Identities=23% Similarity=0.320 Sum_probs=403.6
Q ss_pred CCcEEEEEcCCccceeec-CCCcE---EEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH----------h
Q 003029 93 RQRLLVVANRLPVSAIRR-GEDSW---SLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK----------A 158 (856)
Q Consensus 93 ~~~livvsnrlP~~~~~~-~~~~~---~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~----------~ 158 (856)
..+||||||||||.++++ ++|.| .++.++|||++||.++. +|+||||+|... +.....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~----~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSED----DRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHH----HHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCcc----chhhhhcccccccccccc
Confidence 468999999999999988 57887 67788999999999987 899999998531 1112211 2
Q ss_pred hcCceEEEEecChHhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhc--CCCCEE
Q 003029 159 LAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVV 235 (856)
Q Consensus 159 ~~~~~~~pV~l~~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~--~~~DvI 235 (856)
..+++|+||+|+++++++||+||||++|||+|||+.+.+. .+ ....|+ +.|++|++||++||++|.+.+ +++|+|
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~-~p-~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWT-QP-SFGSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSS-CC-CBCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCC-CC-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 4679999999999999999999999999999999843220 00 012344 569999999999999999999 589999
Q ss_pred EEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCc--ccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh-Cc
Q 003029 236 WCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL-GF 312 (856)
Q Consensus 236 wvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp--~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l-g~ 312 (856)
|||||||+++|.+||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||+++|++++ |.
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 87
Q ss_pred cc--CCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 313 EG--TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 313 ~~--~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
+. ...+++++|+.++|.++|+|||++.|.+... ++ .+.+|++++++++||+||||++.||+..+|+|| +|++
T Consensus 234 ~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 234 RIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp EEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 65 3457899999999999999999999987643 11 145778888999999999999999999999999 9999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~E 470 (856)
++|+++ +++|+|||.|+++++++|+++++++++++++||++||+. ||+| .+.++.+++.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f-~g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRI-DNDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEE-EECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEE-eCCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999875 7886 57899999999999999999999999
Q ss_pred CCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003029 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (856)
Q Consensus 471 G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 550 (856)
|||||++|||||+ +++||+|+|+++|++++++.+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+
T Consensus 383 GfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~ 461 (496)
T 3t5t_A 383 GQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEA 461 (496)
T ss_dssp SCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHH
T ss_pred cCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 9999999999996 457999999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHh
Q 003029 551 WAETFVSELNDTVVE 565 (856)
Q Consensus 551 W~~~fl~~l~~~~~~ 565 (856)
|+++||++|..+...
T Consensus 462 W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 462 WVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999887544
No 2
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=100.00 E-value=6.3e-90 Score=797.41 Aligned_cols=449 Identities=35% Similarity=0.622 Sum_probs=407.9
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (856)
+||||||||+|+.. ++ +.++|||++||.++ +..+++||||+|.. ++ +++........+++|+||||+++
T Consensus 2 ~~livvsnr~p~~~----~~----~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~~~ 71 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----EH----AASAGGLAVGILGALKAAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLSEQ 71 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCC----CC----CcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECCHH
Confidence 57999999999972 11 36899999999998 77899999999965 22 11111112346899999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
++++||+||||++|||+|||..... .|+ ..|.+|.++|+.||+++.+.++++|+|||||||++++|.++|+
T Consensus 72 ~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 72 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHH
Confidence 9999999999999999999985322 366 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeEEEEE
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAA 330 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~-~~v~~~g~~~~v~v 330 (856)
+.++++|+||+|+|||++++|+++|++++++++++++|+|+||++.|+++|+++|+++++.+... ..++++|+..+|.+
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~v 223 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 223 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886543 44778899999999
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~ 410 (856)
+|+|||++.|.+....+++.+ ...+|++++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|+++
T Consensus 224 ip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 224 YPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred EeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 999999999987665565555 6778888999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcC-CCCce
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~-~~~g~ 489 (856)
++++|+++++++++++++||.+||..+|.||+|+.|.++++++.++|++|||||+||++||||||++||||||. +++||
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999983 45689
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 490 lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
||+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|++++++++++|.+||+..|++.|++.|+++
T Consensus 383 vV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 383 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999 79999999999999999999999999999999999999999999999999999999887
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.96 E-value=1.2e-26 Score=262.13 Aligned_cols=313 Identities=18% Similarity=0.185 Sum_probs=237.0
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch---hhhh--------cCc
Q 003029 211 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 276 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~---~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~fr--------~lp 276 (856)
+..+....+.....+... -...|+|++|+++..+++.++++ ..++++.+++|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKK-YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHH-HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhh-ccCCCEEEEecccccccCchHHhCccccccccccc
Confidence 344444444444444444 34679999999999888888874 35789999999987531 1111 111
Q ss_pred ccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHH
Q 003029 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 356 (856)
Q Consensus 277 ~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l 356 (856)
........+..+|.|.+.+..+.+.... .++. ...++.++|+|||.+.|.+....+...+....+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~-----------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG-----------GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh-----------cCCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1123334456799999999877766322 1111 234688999999999998764333334455667
Q ss_pred HHHhc--CCceEEEeeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc
Q 003029 357 QETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (856)
Q Consensus 357 r~~~~--~~~iIl~V~Rld-~~KGi~~~L~Af~~~l~~~--P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~ 431 (856)
+++++ ++++|+++||+. +.||++.+++|++.+.+++ |+ +.|+++|.+ +. .+.+.+++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g-----~~--~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG-----DP--ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCC-----CH--HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCC-----Ch--hHHHHHHHHHhhcC-
Confidence 77763 448999999999 9999999999999998765 65 558877632 21 23456666665543
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-cCCeEEEC
Q 003029 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 510 (856)
Q Consensus 432 ~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g~~g~lVn 510 (856)
.++++.|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeC
Confidence 25667999999999999999999999999999999999999994 899999999999988 44899999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 511 P~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
|.|++++|++|.++++++++.+.++.++++++++.+++..+++.+++.++++.
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 99999999999999995566888888999999999999999999999888764
No 4
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.94 E-value=2.2e-25 Score=261.40 Aligned_cols=297 Identities=17% Similarity=0.206 Sum_probs=206.3
Q ss_pred CCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCC-----Cchhhh-hcCcc--------------------
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIH-RTLPS-------------------- 277 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f-r~lp~-------------------- 277 (856)
.++||+++||||..++|.+++... .+++++|++|..- |....- ..++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 356899999999999999998754 3789999999752 111100 01111
Q ss_pred cHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC--------Cch
Q 003029 278 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NPV 349 (856)
Q Consensus 278 ~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~--------~~~ 349 (856)
-.-+-.++..||.|..-++.|++..++. .+. ..++....+..++.+||||||.+.|.+.... ...
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISG----IAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTT----CCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcc----ccc---ccccccccccCCeEEEECCcchhhcCCCCccccccccchhhh
Confidence 1234567888999999999888765421 111 0111222345678999999999999864211 000
Q ss_pred ---H-HHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHH
Q 003029 350 ---Q-VHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420 (856)
Q Consensus 350 ---~-~~~~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~ 420 (856)
+ .....+++.+ ++.++|++|||+++.||++.+|+|+++++++++ .|+++|.+ +. .+ ..
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~~-~~---~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---KK-KF---EK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---CH-HH---HH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---Cc-hH---HH
Confidence 1 1122344444 367899999999999999999999999976543 35556532 22 22 23
Q ss_pred HHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh
Q 003029 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (856)
Q Consensus 421 ~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~ 500 (856)
.++.+...++. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||||+ .|+|+|+.+|+.+
T Consensus 372 ~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC----CCEEEcCCCCchh
Confidence 33344333322 2554 677899999999999999999999999999999999994 9999999999999
Q ss_pred hc--cCCeE----------EECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 501 SL--GAGAI----------LVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 501 ~l--g~~g~----------lVnP~d~~~lA~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
.+ |.+|+ +|+|.|++++|++|.++|. ..+ +++++.++.. .+.++|..=++++++-+.+.
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~-~~~~~~~~am--~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTP-AYEEMVRNCM--NQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSH-HHHHHHHHHH--HSCCSSHHHHHHHHHHHHTT
T ss_pred eeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcH-HHHHHHHHHH--HhcCCHHHHHHHHHHHHHHh
Confidence 88 56777 7888999999999999986 333 3333333322 24688888888888877654
No 5
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.93 E-value=4.2e-24 Score=246.42 Aligned_cols=300 Identities=19% Similarity=0.161 Sum_probs=212.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch----hhhhc--Cc-------------ccHHHHHHhhcCCEE
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADLV 291 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~fr~--lp-------------~~~~il~~ll~aDlI 291 (856)
..|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++ ........+..+|.|
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeE
Confidence 579999999998888888763456899999999875421 11111 01 011222335579999
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCee--EEEEEeecccChhhhhhhhcC-----------CchHHHHHHHHH
Q 003029 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 358 (856)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~--~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~ 358 (856)
...+....+.+... .+|... +.+ ...+. .++.++|+|||.+.|.+.... +........+++
T Consensus 209 i~~S~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 209 TAVSPTYAREITEP---QFAYGM--EGL-LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp EESSHHHHHHTTSH---HHHTTC--HHH-HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred EecCHHHHHHHhcc---ccCcch--HHH-HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 99988766554321 011000 000 00011 468899999999988754210 001112345666
Q ss_pred Hhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003029 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (856)
Q Consensus 359 ~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (856)
+++ ++++|++|||+.+.||++.+|+|++.+.+ ++ +.|+++|.+ +. .+.+++++++.+.+.
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~~-- 347 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAG-----DP--VLQEGFLAAAAEYPG-- 347 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEE-----CH--HHHHHHHHHHHHSTT--
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCC-----ch--HHHHHHHHHHHhCCC--
Confidence 663 56899999999999999999999999876 23 568888742 21 234566666655431
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c--------
Q 003029 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-------- 503 (856)
Q Consensus 434 g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g-------- 503 (856)
.|+++.|. +.+++..+|+.||++|+||.+||||++++||||| |.|+|+|+.+|..+.+ |
T Consensus 348 ------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~----G~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 348 ------QVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY----GTLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp ------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH----TCEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred ------cEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC----CCCEEECCCCCccceeccCcccccccc
Confidence 37656777 8888999999999999999999999999999999 4999999999999888 4
Q ss_pred -CCeEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003029 504 -AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (856)
Q Consensus 504 -~~g~lVnP~d~~~lA~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (856)
.+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.+++...++.+++-+++...
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC-
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhh
Confidence 68999999999999999999994 245566666666653 789999999999888877643
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.93 E-value=5.3e-25 Score=255.29 Aligned_cols=303 Identities=16% Similarity=0.082 Sum_probs=215.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhh-hhc--C--c---------ccHHH-HHHhhcCCEEEEeC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRT--L--P---------SRSDL-LRAVLAADLVGFHT 295 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-fr~--l--p---------~~~~i-l~~ll~aDlIgf~t 295 (856)
..|+||+|+++..+++.++.+. .++|+.+++|..++.... +.. . | .+..+ ...+..+|.|.+.+
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred CCCEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 5699999998766666655543 367889999986432110 000 0 0 00011 12345689998888
Q ss_pred HHHHHHHHHHHHHH--hC-cccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc--------CCc
Q 003029 296 YDYARHFVSACTRI--LG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--------GRK 364 (856)
Q Consensus 296 ~~~~~~Fl~~~~~~--lg-~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--------~~~ 364 (856)
....+.+.. . +| ... .....++.++|+|||.+.|.+... .+....++++++ +++
T Consensus 199 ~~~~~~~~~----~~~~g~~~~-------~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 199 SQERFGQYS----HDLYRGAVN-------VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHHHTTT----SGGGTTTCC-------TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHHHh----hhccccccc-------ccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCc
Confidence 755544321 1 11 100 002357889999999998865311 122234555543 678
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC----h---HHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD----V---PEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 365 iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~----~---~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+|++|||+.+.||+..+|+|+..+.+++|+. +.|+++|... +. . .+..++.+++++++.+++..
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----- 334 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----- 334 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-----
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-----
Confidence 9999999999999999999999998776652 3466665411 11 0 11223456677777665432
Q ss_pred cccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 511 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP 511 (856)
..|+| .|.++.+++..+|+.| |++|+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|
T Consensus 335 -~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~ 408 (499)
T 2r60_A 335 -GKVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDP 408 (499)
T ss_dssp -TTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECT
T ss_pred -ceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCC
Confidence 13664 8999999999999999 99999999999999999999994 899999999988888 447999999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHhHHh
Q 003029 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 512 ~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 565 (856)
.|++++|++|.+++++ ++.+.++.+++++++.+ +++...++.+++.++++...
T Consensus 409 ~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 409 EDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999985 45778888888998877 99999999999988877544
No 7
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.93 E-value=4e-24 Score=242.75 Aligned_cols=295 Identities=18% Similarity=0.180 Sum_probs=214.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhh-hhcC----cc-cHHHH-HHhhcCCEEEEeCHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----PS-RSDLL-RAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-fr~l----p~-~~~il-~~ll~aDlIgf~t~~~~~~Fl 303 (856)
..|+|++|++....++.++.+. .++++.+++|..++.... +... +. +..+. ..+-.+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 3799999987665555555443 368899999987532110 0000 00 11111 224468999999887666554
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~ 380 (856)
. .+|. ...++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||++.
T Consensus 201 ~----~~g~-----------~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDA-----------DPDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCC-----------CGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCC-----------ChhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 3 2232 1346889999999988865321 1122355555 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+|+|+..+.+++|+. ++.|+++|.+.. +++. .+++++++.+.+.. ..|. +.|.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELGVE------KRIR-FLDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEE-EECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcCCC------CcEE-EcCCCChHHHHHHHHhC
Confidence 999999999998842 366888875321 1222 33455555543321 1366 47999999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~ 538 (856)
|++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|++++|++|.+++++ ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHcC----CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 99999999999999999999994 899999999999988 4579999999999999999999995 4577788888
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 539 NFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 539 ~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+++++.++++...++.+++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 899998899999999999988877544
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.93 E-value=9.4e-24 Score=243.52 Aligned_cols=299 Identities=17% Similarity=0.194 Sum_probs=211.5
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCch----hhhhc--Ccc-------------cHHHHHHhhcCCE
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAADL 290 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~fr~--lp~-------------~~~il~~ll~aDl 290 (856)
..|+||+|+++..+++.+++.. ..++|+.+++|..++.. ..+.. ++. ....-..+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 5799999999888888887764 46789999999975421 11111 110 1122233557999
Q ss_pred EEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC-----------CchHHHHHHHHHH
Q 003029 291 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQET 359 (856)
Q Consensus 291 Igf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 359 (856)
|...+....+.+... .+|... .. .+.....++.++|+|||.+.|.+.... +...+....++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~--~~-~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGL--EG-VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTC--HH-HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcch--HH-HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 999888766654321 011000 00 000013468899999999988754211 0011123446666
Q ss_pred hc---C-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003029 360 FA---G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (856)
Q Consensus 360 ~~---~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (856)
++ + +++|++|||+.+.||++.+|+|+..+.+ ++ +.|+++|.+ +. .+++.+++++.+.+.
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~~---- 346 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGAG-----DV--ALEGALLAAASRHHG---- 346 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEECB-----CH--HHHHHHHHHHHHTTT----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeCC-----ch--HHHHHHHHHHHhCCC----
Confidence 53 2 6799999999999999999999999876 23 568888742 21 234566666665431
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c---------C
Q 003029 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---------A 504 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g---------~ 504 (856)
.|+++.|. +.+++..+|+.||++|+||.+||||++++|||||+ .|+|+|+.+|..+.+ | .
T Consensus 347 ----~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 347 ----RVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ----TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ----cEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCC
Confidence 37756777 88889999999999999999999999999999994 999999999999988 4 5
Q ss_pred CeEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 505 GAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 505 ~g~lVnP~d~~~lA~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.+++...++.+++-++++.
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 7999999999999999999994 245566666666654 78999999999988887654
No 9
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=99.92 E-value=1.1e-24 Score=229.41 Aligned_cols=219 Identities=12% Similarity=0.126 Sum_probs=161.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCce
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~ 670 (856)
+|||++|+||||++....| ....++++++++|++|++ .| .|+|+|||++..+.++++.+ +++|++||+
T Consensus 1 ikli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~-~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa 68 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE-RF-DTYIVTGRSPEEISRFLPLD-INMICYHGA 68 (239)
T ss_dssp -CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH-HS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGT
T ss_pred CeEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhc-CC-CEEEEeCCCHHHHHHHhccc-hheEEECCE
Confidence 4899999999999864322 245799999999999997 58 99999999999999999988 899999999
Q ss_pred EEEecCCeeee----cccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCC
Q 003029 671 FLRCTTGKWMT----TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (856)
Q Consensus 671 ~i~~~~~~w~~----~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~ 746 (856)
+|.. ++.+.. +....++ .+.+..+++... +.++.+++.++..+.++|+..++ +.....+.+.+.+ ...
T Consensus 69 ~i~~-~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~- 140 (239)
T 1u02_A 69 CSKI-NGQIVYNNGSDRFLGVF---DRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEI-ARI- 140 (239)
T ss_dssp EEEE-TTEEEECTTGGGGHHHH---HHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHH-HHH-
T ss_pred EEee-CCeeeecccccccchhh---HHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHH-hcc-
Confidence 9987 344321 1111111 234455555443 34677788888888888875432 1111123333333 211
Q ss_pred CCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--C
Q 003029 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--F 824 (856)
Q Consensus 747 ~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--~ 824 (856)
..+.+.++..++||+|+++|||.|+++|+++++ ++|||| +.||++| |+++.. +.+|.|+|. .
T Consensus 141 --~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-----------via~GD-~~ND~~M-l~~a~~-g~~vam~Na~~~ 204 (239)
T 1u02_A 141 --FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-----------AIIAGD-DATDEAA-FEANDD-ALTIKVGEGETH 204 (239)
T ss_dssp --HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-----------EEEEES-SHHHHHH-HHTTTT-SEEEEESSSCCC
T ss_pred --CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-----------eEEEeC-CCccHHH-HHHhhC-CcEEEECCCCCc
Confidence 135567788899999999999999999998752 899999 9999999 998754 889999885 2
Q ss_pred c-cccCC---HHHHHHHHHHHHHHH
Q 003029 825 L-HYLRM---KMCMRFLSQNYLMMA 845 (856)
Q Consensus 825 ~-~~l~~---~~~~~~~l~~~~~~~ 845 (856)
+ |.+.+ ...|.++|+.++...
T Consensus 205 A~~v~~~~~~~~gV~~~l~~~~~~~ 229 (239)
T 1u02_A 205 AKFHVADYIEMRKILKFIEMLGVQK 229 (239)
T ss_dssp CSEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCCHHHHHHHHHHHHHhc
Confidence 3 88888 888999999998543
No 10
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.92 E-value=1.3e-23 Score=234.18 Aligned_cols=281 Identities=18% Similarity=0.219 Sum_probs=210.0
Q ss_pred CCCEEEEeCccchh-HHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+||+|+...+. +...++. ....++.+.+|...+ .+...+..+.+.+. +..+|.|.+.+....+.+..
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 157 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS---- 157 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH----
T ss_pred CCCEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH----
Confidence 35999999876553 3334443 333458888896432 12222333333333 45789999999876665543
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc---CCceEEEeecccccCChHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAF 385 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~V~Rld~~KGi~~~L~Af 385 (856)
..+ ...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||++.+++|+
T Consensus 158 ~~~------------~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~ 220 (394)
T 3okp_A 158 AFG------------SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAM 220 (394)
T ss_dssp HHC------------SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHH
T ss_pred hcC------------CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHH
Confidence 212 234789999999999886521 123455666663 558999999999999999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 003029 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (856)
Q Consensus 386 ~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~ 465 (856)
+.+.+++|+++ |+++|. ++.. +.+++++..++. .|.+ .|.++.+++..+|+.||++|+
T Consensus 221 ~~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~~--------~v~~-~g~~~~~~~~~~~~~ad~~v~ 278 (394)
T 3okp_A 221 PQVIAARPDAQ----LLIVGS-----GRYE----STLRRLATDVSQ--------NVKF-LGRLEYQDMINTLAAADIFAM 278 (394)
T ss_dssp HHHHHHSTTCE----EEEECC-----CTTH----HHHHHHTGGGGG--------GEEE-EESCCHHHHHHHHHHCSEEEE
T ss_pred HHHHhhCCCeE----EEEEcC-----chHH----HHHHHHHhcccC--------eEEE-cCCCCHHHHHHHHHhCCEEEe
Confidence 99999988754 777763 2322 334444322221 3664 789999999999999999999
Q ss_pred CCCC-------cCCChhHHHHHhhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 466 TSLR-------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 466 ~S~~-------EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~-~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
||.. ||||++++|||||+ .|+|+|+.+|..+.+.. +|++++|.|++++|++|.+++++ ++.+.++.+
T Consensus 279 ps~~~~~~~~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~ 353 (394)
T 3okp_A 279 PARTRGGGLDVEGLGIVYLEAQACG----VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDD-PIRRAAMGA 353 (394)
T ss_dssp CCCCBGGGTBCCSSCHHHHHHHHTT----CCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHH
T ss_pred cCccccccccccccCcHHHHHHHcC----CCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 9999 99999999999994 89999999999998822 89999999999999999999985 557788888
Q ss_pred HHHHHHHh-cCHHHHHHHHHHHHHHhH
Q 003029 538 HNFTHVTT-HTAQEWAETFVSELNDTV 563 (856)
Q Consensus 538 ~~~~~v~~-~~~~~W~~~fl~~l~~~~ 563 (856)
++++++.+ +++..+++.+++.+++..
T Consensus 354 ~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 354 AGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 88888865 899999999999888754
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.92 E-value=2.9e-24 Score=260.82 Aligned_cols=311 Identities=12% Similarity=0.097 Sum_probs=214.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH-------------HHHhhcCCEEEEeCHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-------------LRAVLAADLVGFHTYD 297 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i-------------l~~ll~aDlIgf~t~~ 297 (856)
..|+||.|++...+++.++++.. ++|++++.|...+.........| +.+ ...+-.||.|...+..
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence 57999999877766766666554 78999999975322111111111 011 1146689999988876
Q ss_pred HHHHHHHHHHHHhCccc---CCC------ceeeCCeeEEEEEeecccChhhhhhhhcCCc----hHHHHHHH-------H
Q 003029 298 YARHFVSACTRILGFEG---TPE------GVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL-------Q 357 (856)
Q Consensus 298 ~~~~Fl~~~~~~lg~~~---~~~------~v~~~g~~~~v~viP~GID~~~f~~~~~~~~----~~~~~~~l-------r 357 (856)
..+.....+.. .+... .+. ++..... ++.++|+|||.+.|.+...... .......+ +
T Consensus 485 ~~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 485 EIAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp HHHCCSSSCCT-TGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred HHHHHHHHHHH-hhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 55431110000 00000 000 1111111 7899999999999986542211 00111111 1
Q ss_pred HH-----hcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC--CCChHHHHHHHHHHHHHHHHhh
Q 003029 358 ET-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTSQVHEIVGRIN 430 (856)
Q Consensus 358 ~~-----~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~--r~~~~~~~~l~~~l~~lv~~IN 430 (856)
+. ..++++|++|||+++.||+..+++||..+.+.+|++ .|+++|.+. .....+..+..+++.+++.+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg 637 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHHcC
Confidence 11 136789999999999999999999999998877764 588887543 1122334445667777777654
Q ss_pred cccCCCCcccEEEeCC----CCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c
Q 003029 431 GRFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 503 (856)
Q Consensus 431 ~~~g~~~~~pV~~~~g----~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g 503 (856)
.. ..|.| .| .++.+++..+|+ +||+||+||.+||||++++||||| |.|+|+|+.+|..+.+ |
T Consensus 638 L~------~~V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~----G~PVIasd~GG~~EiV~dg 706 (816)
T 3s28_A 638 LN------GQFRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC----GLPTFATCKGGPAEIIVHG 706 (816)
T ss_dssp CB------BBEEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT----TCCEEEESSBTHHHHCCBT
T ss_pred CC------CcEEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc----CCCEEEeCCCChHHHHccC
Confidence 32 13665 56 445699999998 689999999999999999999999 4999999999999998 6
Q ss_pred CCeEEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003029 504 AGAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 ~~g~lVnP~d~~~lA~ai~~aL----~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (856)
.+|++|+|.|++++|++|.+++ .++ +.+.++.+++++++ +.++|..+++++++-++..
T Consensus 707 ~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 707 KSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7899999999999999998877 555 57888888999998 7899999999999877654
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.92 E-value=8.4e-24 Score=238.85 Aligned_cols=280 Identities=21% Similarity=0.209 Sum_probs=201.4
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|+++...+..+++. ..++.+++|..++.... ...+.+.+.+..+|.+.+.+.++.+.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~--------- 189 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP--------- 189 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT---------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh---------
Confidence 469999999887766555443 27899999987653210 00111222234556655444332211
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~~ 387 (856)
.+ ...++.++|+|||+..|.+... .......+++++ .++++|+++||+.+.||++.+|+|+..
T Consensus 190 -------~~----~~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 190 -------EL----DRNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp -------TS----CTTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred -------hC----CccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 11 1135779999999877654211 122345566666 367899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC---CCCHHHHHHHHHHccEEE
Q 003029 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR---SLDFPALCALYAVTDVAL 464 (856)
Q Consensus 388 ~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g---~v~~~el~aly~~ADv~v 464 (856)
+.+++|+++ |+++|.+.. +.+++ .+.+++++.+.+.. ..|.+ .| .++.+++..+|+.||++|
T Consensus 256 l~~~~~~~~----l~i~G~g~~-~~~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v 320 (416)
T 2x6q_A 256 VKEKIPGVQ----LLLVGVMAH-DDPEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVIL 320 (416)
T ss_dssp HHHHCTTCE----EEEEECCCT-TCHHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEE
T ss_pred HHHhCCCeE----EEEEecCcc-cchhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEE
Confidence 999888754 887875432 11332 33445555554431 13665 55 456899999999999999
Q ss_pred ECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 465 ~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++ |++++|++|.+++++ ++.+.++.++++++
T Consensus 321 ~ps~~E~~~~~~lEAma~G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 321 QMSIREGFGLTVTEAMWKG----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKER 393 (416)
T ss_dssp ECCSSCSSCHHHHHHHHTT----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCCcCCCccHHHHHHHcC----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 9999999999999999994 899999999999888 56899997 999999999999985 45777788888888
Q ss_pred HH-hcCHHHHHHHHHHHHHHh
Q 003029 543 VT-THTAQEWAETFVSELNDT 562 (856)
Q Consensus 543 v~-~~~~~~W~~~fl~~l~~~ 562 (856)
+. .+++...++.+++.++++
T Consensus 394 ~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 394 VRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHHHHHh
Confidence 85 799999999998877653
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.91 E-value=3.8e-23 Score=233.09 Aligned_cols=283 Identities=14% Similarity=0.094 Sum_probs=203.9
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CC-CCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCC--EEEEeCHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NS-DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD--LVGFHTYDYARHFVSAC 306 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aD--lIgf~t~~~~~~Fl~~~ 306 (856)
..|+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+...+..+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 4599999955444433333322 22 3456666665443211 11222344577 888888765555432
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---c--CCceEEEeecccccCChHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---A--GRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~iIl~V~Rld~~KGi~~~ 381 (856)
++. ..++.++|+|||++.|.. .++++ . ++++|+++||+.+.||++.+
T Consensus 151 ---~~~------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YGC------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TTC------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cCC------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 222 247889999999987721 12223 2 57899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC-cccEEEeCCCCCHHHHHHHHHHc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-AVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~-~~pV~~~~g~v~~~el~aly~~A 460 (856)
|+||..+.+++|+++ |+++|.+..... ..+++.+++++.+.+..- ... +..|+++.|.++.+++..+|+.|
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~a 274 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNAC 274 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhC
Confidence 999999999999875 777875432211 124455666665544320 000 00156679999999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCC---------------eE--EECCCCHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVANAI 521 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~---------------g~--lVnP~d~~~lA~ai 521 (856)
|++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+ |+ +++|.|++++|++|
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i 350 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVLG----KPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTTT----CCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH
T ss_pred CEEEeCCCcCCCCcHHHHHHHcC----CCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH
Confidence 99999999999999999999994 899999999999888 344 88 99999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhHHh
Q 003029 522 ARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 522 ~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+++++ ++++.++.+++++++ +.++++.+++.+++.++++...
T Consensus 351 -~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 351 -TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp -HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99984 557788888899998 5789999999999999887543
No 14
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.91 E-value=3.8e-23 Score=231.74 Aligned_cols=279 Identities=18% Similarity=0.212 Sum_probs=201.3
Q ss_pred CCCEEEEeCccchhHHHHH-HhcC-CCCeEEEEEecCCCchhhhhcCcccHHHHH-HhhcCCEEEEeCHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCL-KEYN-SDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACT 307 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~l-r~~~-~~~~i~~flH~PfP~~e~fr~lp~~~~il~-~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (856)
..|+|++|......++.++ +... .+.|+.+++|...+ ..+..-+....+.+ .+-.+|.|...+....+.+..
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 3599999986654444443 3332 36899999997421 11111122223333 345799999988766655432
Q ss_pred HHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHH
Q 003029 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLA 384 (856)
Q Consensus 308 ~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~A 384 (856)
..+ ...++.++|+|||++.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 174 -~~~------------~~~~~~vi~ngv~~~~~~~~~--~------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LVK------------PNKDIQTVYNFIDERVYFKRD--M------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HTC------------CSSCEEECCCCCCTTTCCCCC--C------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hhC------------CcccEEEecCCccHHhcCCcc--h------HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 211 124688999999998886431 1 2344444 357899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
++.+.++ ++ +.|+++|. ++... ++++++.+.+.. ..|.+ .|. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~----~~l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~-~g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VD----AKLLLVGD-----GPEFC----TILQLVKNLHIE------DRVLF-LGK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SC----CEEEEECC-----CTTHH----HHHHHHHTTTCG------GGBCC-CBS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CC----CEEEEECC-----chHHH----HHHHHHHHcCCC------CeEEE-eCc--hhhHHHHHHhCCEEE
Confidence 9998776 33 45777763 23333 344444443311 12443 554 578999999999999
Q ss_pred ECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 465 ~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+++++ ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~G----~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACG----VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTT----CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhcC----CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 9999999999999999994 899999999999988 5689999999999999999999985 45777888888998
Q ss_pred H-HhcCHHHHHHHHHHHHHHhH
Q 003029 543 V-TTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~~ 563 (856)
+ ..+++...++.+++.++++.
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHH
Confidence 8 88999999999999888764
No 15
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.91 E-value=4.5e-23 Score=230.98 Aligned_cols=275 Identities=17% Similarity=0.100 Sum_probs=209.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.+....++..+.+. .+.++.+++|..+|....+..+-.. +-..+-.+|.|.+.+....+.+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4599999998877765555443 3688999999988765332211111 113456799999999766665543 12
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rl-d~~KGi~~~L~Af~~~l 389 (856)
+ ..++ ++|+|||.+.|.+...... + -.++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 2 1367 9999999998875432110 0 1256899999999 99999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~- 468 (856)
+++|+++ |+++|. ++. ..+ ++++.++. ..|. +.|.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~~----l~i~G~-----~~~-~~l----~~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDVE----ILIVGR-----GDE-DEL----REQAGDLA--------GHLR-FLGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTCE----EEEESC-----SCH-HHH----HHHTGGGG--------GGEE-ECCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCeE----EEEEcC-----CcH-HHH----HHHHHhcc--------CcEE-EEecCCHHHHHHHHHHCCEEEecCCC
Confidence 8888754 777763 232 333 33333321 1366 4899999999999999999999997
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
.||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAG----TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHHT----CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHcC----CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHhC
Confidence 999999999999994 899999999988888 4679999999999999999999985 457778888889998899
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 003029 547 TAQEWAETFVSELNDTVV 564 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (856)
++...++.+++.+++...
T Consensus 368 s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp BHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999998887653
No 16
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.90 E-value=8.1e-22 Score=230.06 Aligned_cols=313 Identities=12% Similarity=0.057 Sum_probs=205.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecC----C----CchhhhhcCc--------------ccHH-HHHHhhc
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----F----PSSEIHRTLP--------------SRSD-LLRAVLA 287 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~P----f----P~~e~fr~lp--------------~~~~-il~~ll~ 287 (856)
..||+|+||||..++|.+||+..++++.+|+.|.- + -..+++..+. ..-. .-.++..
T Consensus 181 ~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~ 260 (725)
T 3nb0_A 181 HAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHS 260 (725)
T ss_dssp EEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHh
Confidence 46999999999999999999999999999999975 1 1111121111 0111 2334668
Q ss_pred CCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCC----chHHHHHH-HHHHh--
Q 003029 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE-LQETF-- 360 (856)
Q Consensus 288 aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~-lr~~~-- 360 (856)
||.|..-++.|++.-. .+++.. ...+ ||||||++.|.+..... +.++.++. ++..+
T Consensus 261 AD~ITTVS~~yA~Ei~----~Ll~r~-----------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~ 323 (725)
T 3nb0_A 261 ADVFTTVSQITAFEAE----HLLKRK-----------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHG 323 (725)
T ss_dssp SSEEEESSHHHHHHHH----HHTSSC-----------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEECCHHHHHHHH----HHhcCC-----------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhccc
Confidence 9999999888776533 344321 1233 99999999987631100 11111211 22222
Q ss_pred -----cCCceEEE-eeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHH-----HHHHHHHHHHHH
Q 003029 361 -----AGRKVMLG-VDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPE-----YQRLTSQVHEIV 426 (856)
Q Consensus 361 -----~~~~iIl~-V~Rld-~~KGi~~~L~Af~~~l~~~--P~~~~~v~Lv~v~~p~r~~~~~-----~~~l~~~l~~lv 426 (856)
.+++++++ +||++ ..||++.+++|+.++...- ......|+-+ |..|+...... .+...+++++.+
T Consensus 324 ~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvaf-ii~p~~~~~~~~~~l~~~~~~~~l~~~~ 402 (725)
T 3nb0_A 324 CFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAF-IVMPAKNNSFTVEALKGQAEVRALENTV 402 (725)
T ss_dssp CCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEE-EECCCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEE-EEeCCCCCCCchhhhcchhHHHHHHHHH
Confidence 14566666 79999 5799999999999986431 1111223333 33455433321 111111111111
Q ss_pred H-----------------------------------------------------------------------------Hh
Q 003029 427 G-----------------------------------------------------------------------------RI 429 (856)
Q Consensus 427 ~-----------------------------------------------------------------------------~I 429 (856)
. ++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l 482 (725)
T 3nb0_A 403 HEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQV 482 (725)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhc
Confidence 1 11
Q ss_pred hcccCCCCcccEEEeCCCCCHH------HHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-
Q 003029 430 NGRFGTLTAVPIHHLDRSLDFP------ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (856)
Q Consensus 430 N~~~g~~~~~pV~~~~g~v~~~------el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l- 502 (856)
+-.=...+...|+|+.+.++.. ++..+|+.||+||+||++||||++++||||| |.|+|+|+.+|+.+.+
T Consensus 483 ~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~----G~PvI~s~~gG~~d~V~ 558 (725)
T 3nb0_A 483 QLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM----GVPSITTNVSGFGSYME 558 (725)
T ss_dssp TCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT----TCCEEEETTBHHHHHHH
T ss_pred CCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc----CCCEEEeCCCChhhhhh
Confidence 1000011234578888888876 5899999999999999999999999999999 4999999999998877
Q ss_pred -c-------CCeEEEC---CCCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 503 -G-------AGAILVN---PWNITEVANAIARAL----NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 503 -g-------~~g~lVn---P~d~~~lA~ai~~aL----~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+ .+|++|. |.|+++++++|.++| .+++.+|..+.++.++....++|..-++.+++.++.+...
T Consensus 559 dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 2 2588884 557776666666665 4677777777777777788999999999999988877543
No 17
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=99.88 E-value=1.7e-22 Score=213.63 Aligned_cols=217 Identities=13% Similarity=0.131 Sum_probs=149.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc-c---CceEE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLWLA 665 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l---~lgli 665 (856)
++|||++|+||||+++ ...++++++++|++|.+ +|+.|+|+|||++..+.+.++. + ..++|
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i 67 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPP--------------RLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVF 67 (246)
T ss_dssp CSEEEEECSBTTTBST--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CceEEEEeCcCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEE
Confidence 5799999999999987 45789999999999997 7999999999999998888874 1 25899
Q ss_pred eeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCcEEeeecceEEEEe--ecCCh----hhhHHH
Q 003029 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNY--KYADV----EFGRIQ 733 (856)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~ie~k~~si~~~y--~~~d~----e~~~~q 733 (856)
++||+++...++. |...++..++.++...+.+.++.+. ....+.|++.+...+.+.. +.... ++....
T Consensus 68 ~~NGa~i~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (246)
T 3f9r_A 68 AENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYD 147 (246)
T ss_dssp EGGGTEEEETTEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHH
T ss_pred ECCCcEEEECCEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEec
Confidence 9999999875432 4433211134444555555544332 1234567776655444321 11111 111111
Q ss_pred -----HHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC----ccc
Q 003029 734 -----ARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL----GKN 803 (856)
Q Consensus 734 -----a~el~~~L~~~~~~~~~v~-v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~----~nD 803 (856)
..++.+.| .+.+.+..+. +.+|..++||+|+|+|||.|+++|++ . +++++|||| + .||
T Consensus 148 ~~~~~~~~~~~~l-~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~--~--------~~ev~afGD-~~~~g~ND 215 (246)
T 3f9r_A 148 NEHRVRASLIAEL-ENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED--D--------FEEIHFFGD-KTQEGGND 215 (246)
T ss_dssp HHHCHHHHHHHHH-HHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT--T--------CSEEEEEES-CCSTTSTT
T ss_pred ccchHHHHHHHHH-HhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc--C--------cccEEEEeC-CCCCCCCC
Confidence 13344444 3223333365 45678999999999999999999987 3 689999999 8 999
Q ss_pred ccccccccccCcceEEeCCCCccccCCHHHHHHHHHHHHHH
Q 003029 804 CNLPLQFLMQTISTVRLDSSFLHYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 804 e~M~f~~~~~~~~~v~V~~~~~~~l~~~~~~~~~l~~~~~~ 844 (856)
++| |++++. .++. +.++.+..+.|++++.|
T Consensus 216 i~M-l~~a~~--~g~~--------v~n~~~~~~~~~~~~~~ 245 (246)
T 3f9r_A 216 YEI-YTDKRT--IGHK--------VTSYKDTIAEVEKIIAM 245 (246)
T ss_dssp HHH-HTCTTS--EEEE--------CSSHHHHHHHHHHHHHT
T ss_pred HHH-HhCCCc--cEEE--------eCCHHHHHHHHHHHhcC
Confidence 999 997632 2333 35899999999998854
No 18
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.88 E-value=6.7e-22 Score=212.82 Aligned_cols=219 Identities=16% Similarity=0.147 Sum_probs=147.8
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~- 661 (856)
-..|...++|+|+||+||||+++. ...++++++++|++|.+ .|+.|+++|||+...+..+++.++
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 13 ENLYFQGMIKLIATDIDGTLVKDG-------------SLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp ------CCCCEEEECCBTTTBSTT-------------CSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGG
T ss_pred hhhhhccCceEEEEeCcCCCCCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 357888999999999999999872 22689999999999986 699999999999999999999884
Q ss_pred -ceEEeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcC----------CCcEEeee---------------
Q 003029 662 -LWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT----------PRSHFEQR--------------- 714 (856)
Q Consensus 662 -lgliaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt----------~gs~ie~k--------------- 714 (856)
.++|+.||+.+...++. +. ..++. +.+.++++.+.+.. .+.+....
T Consensus 79 ~~~~I~~NGa~i~~~~~~i~~----~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (283)
T 3dao_A 79 KLLYITDGGTVVRTPKEILKT----YPMDE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFE 151 (283)
T ss_dssp GCEEEETTTTEEECSSCEEEE----CCCCH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCC
T ss_pred CcEEEECCCcEEEECCEEEEE----ecCCH---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCC
Confidence 58999999999864332 22 22343 33444444433221 11111100
Q ss_pred --------------cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHH
Q 003029 715 --------------ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAE 779 (856)
Q Consensus 715 --------------~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~ 779 (856)
-..+.+.. +++......+.+.+.+ . ..+.+ ..+..++||.|+++|||.|+++++++
T Consensus 152 ~~~~~~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~-~-----~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~ 222 (283)
T 3dao_A 152 MREVDDITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAW-N-----KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDR 222 (283)
T ss_dssp EEECSCGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHH-T-----TTEEEEEETTTEEEEEETTCCHHHHHHHHHHH
T ss_pred ceEcCCHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHh-c-----CCEEEEEecCceEEEeeCCCcHHHHHHHHHHH
Confidence 00000000 0110011112233333 1 23554 45788999999999999999999999
Q ss_pred hCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHH
Q 003029 780 IVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYL 842 (856)
Q Consensus 780 l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~ 842 (856)
+| +++++++|||| +.||++| |+++ +.+|.++|.. + |-..+.++ |.+.|+++|
T Consensus 223 lg------i~~~e~ia~GD-~~NDi~m-l~~a---g~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~l 283 (283)
T 3dao_A 223 FD------LLPDEVCCFGD-NLNDIEM-LQNA---GISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSFL 283 (283)
T ss_dssp TT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHTC
T ss_pred hC------CCHHHEEEECC-CHHHHHH-HHhC---CCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHhC
Confidence 99 67899999999 9999999 8877 5899998863 2 66666665 888887763
No 19
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.88 E-value=3.4e-21 Score=195.07 Aligned_cols=190 Identities=21% Similarity=0.220 Sum_probs=150.5
Q ss_pred eecccChhhhh--hhhcCCchHHHHHHHHHHhc--CCceEEEeeccc-ccCChHHHHHHHHHHH--HhCcCccCceEEEE
Q 003029 331 FPIGIDSERFI--RALEINPVQVHIKELQETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFL--EENSDWRGKVVLLQ 403 (856)
Q Consensus 331 iP~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~iIl~V~Rld-~~KGi~~~L~Af~~~l--~~~P~~~~~v~Lv~ 403 (856)
+|+|||++.|. +.. ....+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|+ +.|++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~----~~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC----eEEEE
Confidence 69999999997 532 112223455677764 677999999999 9999999999999997 77776 45877
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
+|.. + ....+++++++.+.+ .|+++.|.++.+++..+|+.||++|+||..||||++++|||||+
T Consensus 76 ~G~~-----~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGKG-----D--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECCB-----C--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECCC-----C--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 7642 2 012345555555433 26644899999999999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
.|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++|.++++.++.+++++++.+|
T Consensus 140 ----~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 ----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ----CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 899999999999988 77899999999999999999999967778888888888887654
No 20
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.87 E-value=1.8e-21 Score=213.93 Aligned_cols=239 Identities=14% Similarity=0.011 Sum_probs=182.4
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.++...+. .+..+.+ .+++|..++... .+|.|.+.+....+.+..
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 4699999997765432 3345778 889999876321 188888888655443321
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
..++.++|+|||++.|.+... ...++++|+++||+.+.||++.+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 135678999999988865321 123567899999999999999999999886
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC--
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-- 468 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-- 468 (856)
+ +.|+++|.+ +.. +.+++++.+++. .|+| .|.++.+++..+|+.||++|+||.
T Consensus 188 ---~----~~l~i~G~g-----~~~----~~l~~~~~~~~~--------~v~~-~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 ---G----RRLVLAGPA-----WEP----EYFDEITRRYGS--------TVEP-IGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp ---T----CCEEEESCC-----CCH----HHHHHHHHHHTT--------TEEE-CCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred ---C----cEEEEEeCc-----ccH----HHHHHHHHHhCC--------CEEE-eccCCHHHHHHHHHhCCEEEECCccc
Confidence 3 447777642 222 233444444331 3664 899999999999999999999999
Q ss_pred --------CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 469 --------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 469 --------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
.||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++| |++++|++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVSG----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHTT----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhcC----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 899999999999994 999999999999988 347999999 99999999999987 3
Q ss_pred HHHHHHH-HhcCHHHHHHHHHHHHHHhHH
Q 003029 537 WHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (856)
Q Consensus 537 ~~~~~~v-~~~~~~~W~~~fl~~l~~~~~ 564 (856)
+++++++ +.+++...++.+++.++++..
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3445555 788999999999988887654
No 21
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=99.86 E-value=9.6e-21 Score=205.93 Aligned_cols=218 Identities=13% Similarity=0.217 Sum_probs=152.9
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChh-HHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEE
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLA 665 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~-~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgli 665 (856)
..+|+|+||+||||++. ...++++ ++++|++|.+ +|+.|+++|||+...+.+++..++ .++|
T Consensus 35 M~iKli~fDlDGTLld~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i 99 (304)
T 3l7y_A 35 MSVKVIATDMDGTFLNS--------------KGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFV 99 (304)
T ss_dssp -CCSEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEE
T ss_pred eeeEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEE
Confidence 46899999999999987 3568888 8999999986 699999999999999999998874 6899
Q ss_pred eeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCC----------cEEeee---------------------
Q 003029 666 AENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR----------SHFEQR--------------------- 714 (856)
Q Consensus 666 aenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~g----------s~ie~k--------------------- 714 (856)
++||+.+...++.... ..++. +.+.++++.+.+..++ .++...
T Consensus 100 ~~nGa~i~~~~~~i~~---~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
T 3l7y_A 100 GENGANIISKNQSLIE---VFQQR---EDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNS 173 (304)
T ss_dssp EGGGTEEEETTEEEEE---CCCCH---HHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESC
T ss_pred eCCCcEEEECCEEEEE---ecCCH---HHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCC
Confidence 9999999754333211 12342 3445555544332111 111100
Q ss_pred ------cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCC
Q 003029 715 ------ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 787 (856)
Q Consensus 715 ------~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~ 787 (856)
.....+.... +++ ...++.+.+ ...+....+.++. +..++||.|+++|||.|++++++++|
T Consensus 174 l~~~~~~~~~ki~~~~-~~~----~~~~~~~~l-~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg------ 241 (304)
T 3l7y_A 174 FSPLPDERFFKLTLQV-KEE----ESAQIMKAI-ADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWN------ 241 (304)
T ss_dssp CSSCC-CCEEEEEEEC-CGG----GHHHHHHHH-HTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTT------
T ss_pred HHHcCcCCeEEEEEEc-CHH----HHHHHHHHH-HHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhC------
Confidence 0000000000 111 123455555 4333322366554 67899999999999999999999999
Q ss_pred CCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLMM 844 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~~ 844 (856)
+++++++|||| +.||++| |+.+ +++|.++|.. + |-..+.++ |.+.|++++..
T Consensus 242 i~~~e~i~~GD-s~NDi~m-~~~a---g~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 242 FTSDHLMAFGD-GGNDIEM-LKLA---KYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp CCGGGEEEEEC-SGGGHHH-HHHC---TEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred cCHHHEEEECC-CHHHHHH-HHhc---CCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence 67899999999 9999999 8876 5889998852 3 77777777 99999998754
No 22
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=1.8e-21 Score=209.63 Aligned_cols=222 Identities=15% Similarity=0.194 Sum_probs=143.6
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~- 661 (856)
-.+|+.+++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+|+|||+...+..+++.++
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~ 77 (285)
T 3pgv_A 13 ENLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGI 77 (285)
T ss_dssp --------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCS
T ss_pred ccccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCC
Confidence 36799999999999999999987 45789999999999985 799999999999999999998885
Q ss_pred -ceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCc----------EEeeecce-------------
Q 003029 662 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS----------HFEQRETS------------- 717 (856)
Q Consensus 662 -lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs----------~ie~k~~s------------- 717 (856)
.++|++||+.+...++... ....++ .+.+.++++.+.. ..+. +.......
T Consensus 78 ~~~~I~~nGa~i~~~~~~~l--~~~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T 3pgv_A 78 RSYMITSNGARVHDSDGQQI--FAHNLD---RDIAADLFEIVRN-DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYK 151 (285)
T ss_dssp CCEEEEGGGTEEECTTSCEE--EECCCC---HHHHHHHTTTTTT-CTTCEEEEEETTEEEESSCC-----CTTSCCCCEE
T ss_pred CccEEEcCCeEEECCCCCEE--EecCCC---HHHHHHHHHHHhh-cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccE
Confidence 4789999999985333321 112233 3445555552211 1111 11000000
Q ss_pred ------------EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCC
Q 003029 718 ------------LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSK 784 (856)
Q Consensus 718 ------------i~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~ 784 (856)
..+.+...+++......+.+.+.+ . ..+.++ .+..++||.|+++|||.|+++|++++|
T Consensus 152 ~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~-~-----~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg--- 222 (285)
T 3pgv_A 152 LYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARW-G-----DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLG--- 222 (285)
T ss_dssp ECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHH-G-----GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTT---
T ss_pred EecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHh-c-----CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhC---
Confidence 000011112221111112222222 1 135544 467899999999999999999999999
Q ss_pred cCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-c--ccCC--HHHHHHHHHHHH
Q 003029 785 KMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-H--YLRM--KMCMRFLSQNYL 842 (856)
Q Consensus 785 ~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~--~l~~--~~~~~~~l~~~~ 842 (856)
+++++++|||| +.||++| |+.+ +.+|.++|.. + | -..+ -.-|.+.|++++
T Consensus 223 ---i~~~~~ia~GD-~~NDi~m-l~~a---g~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 223 ---YTLSDCIAFGD-GMNDAEM-LSMA---GKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp ---CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred ---CCHHHEEEECC-cHhhHHH-HHhc---CCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 67899999999 9999999 8877 6899998862 2 3 2333 344888888875
No 23
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.86 E-value=5e-22 Score=219.92 Aligned_cols=228 Identities=14% Similarity=0.161 Sum_probs=177.3
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (856)
.+|.|.+.+....+.+.+ .+|. ...++.++|+|||.+.|.+....+ ....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~-----------~~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQT-----------EPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCC-----------CGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCC-----------ChhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCC
Confidence 589999998877666643 2232 234688999999999887653221 234466666 367
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~-~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (856)
++|+++||+.+.||+..+++|+..+.++ +|+ +.|+++|.+. + ..+ ++++.+.+.. ..|.
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~-----~-~~~----~~~~~~~~~~------~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK-----P-RKF----EALAEKLGVR------SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC-----C-HHH----HHHHHHHTCG------GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC-----H-HHH----HHHHHHcCCC------CcEE
Confidence 8999999999999999999999998776 455 4588776422 1 223 3344333211 1366
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEEC-CCCHHHHHH
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAN 519 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVn-P~d~~~lA~ 519 (856)
+ .|. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++ |.|++++|+
T Consensus 257 ~-~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 F-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp E-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred E-CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC----CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 5 554 4789999999999999999999999999999994 899999999999888 57899998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 520 ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
+|.+++++ ++.+.++.+++++++.++++..|++.+.+.++.
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999985 557888888899999999999999988887764
No 24
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.86 E-value=3e-20 Score=199.78 Aligned_cols=221 Identities=14% Similarity=0.226 Sum_probs=153.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+..++..++ .++|++
T Consensus 5 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~ 69 (290)
T 3dnp_A 5 SKQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITH 69 (290)
T ss_dssp -CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEG
T ss_pred cceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEc
Confidence 5799999999999987 45689999999999986 699999999999999999888885 389999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE-------------------------EEe
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV-------------------------WNY 722 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~-------------------------~~y 722 (856)
||+.+....+.+... ..++ .+.+.++++.+.+......+........ ..+
T Consensus 70 nGa~i~~~~~~~~~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (290)
T 3dnp_A 70 SGAYIAEKIDAPFFE--KRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFV 144 (290)
T ss_dssp GGTEEESSTTSCSEE--CCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEEC
T ss_pred CCeEEEcCCCCEEEe--cCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhcccccccccccccc
Confidence 999998522322111 1233 4566677766654321111111110000 000
Q ss_pred e------------------cCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcC
Q 003029 723 K------------------YADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHS 783 (856)
Q Consensus 723 ~------------------~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~ 783 (856)
. ..+++. ..++.+.+ .... ..+.++ .+..++||.|+++|||.|++++++++|
T Consensus 145 ~~~~~~~~~~~~~~~ki~~~~~~~~----~~~~~~~l-~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg-- 215 (290)
T 3dnp_A 145 ESLSDLLMDEPVSAPVIEVYTEHDI----QHDITETI-TKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELG-- 215 (290)
T ss_dssp SCHHHHHHHSCCCCSEEEEECCGGG----HHHHHHHH-HHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT--
T ss_pred CCHHHHHhcCCCCceEEEEeCCHHH----HHHHHHHH-HhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC--
Confidence 0 001111 12222332 1111 245544 468899999999999999999999999
Q ss_pred CcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHHHHHhc
Q 003029 784 KKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLMMARAF 848 (856)
Q Consensus 784 ~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~~~~~~ 848 (856)
+++++++|||| +.||++| |+++ +++|.++|.. + |-..+..+ |.+.|++++..-.+-
T Consensus 216 ----i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~~ 280 (290)
T 3dnp_A 216 ----LSMDDVVAIGH-QYDDLPM-IELA---GLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRK 280 (290)
T ss_dssp ----CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHHC
T ss_pred ----CCHHHEEEECC-chhhHHH-HHhc---CCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCcc
Confidence 67899999999 9999999 8876 6899998863 2 77777776 999999998765443
No 25
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.85 E-value=2.5e-20 Score=199.24 Aligned_cols=221 Identities=13% Similarity=0.110 Sum_probs=145.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-----ce
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LW 663 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-----lg 663 (856)
.++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+.+++..++ .+
T Consensus 3 M~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~ 67 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGF 67 (279)
T ss_dssp -CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCE
T ss_pred CcceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCE
Confidence 35799999999999987 45689999999999986 699999999999999999988875 47
Q ss_pred EEeeCceEEEec-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE----------------EEeecCC
Q 003029 664 LAAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV----------------WNYKYAD 726 (856)
Q Consensus 664 liaenG~~i~~~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~----------------~~y~~~d 726 (856)
+|++||+.+... ++.... ...++.+. +.++++.+.+..-...+...+.... ..+...+
T Consensus 68 ~i~~nGa~i~~~~~~~~~~--~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (279)
T 4dw8_A 68 ILSYNGGEIINWESKEMMY--ENVLPNEV---VPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETN 142 (279)
T ss_dssp EEEGGGTEEEETTTCCEEE--ECCCCGGG---HHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECS
T ss_pred EEEeCCeEEEECCCCeEEE--EecCCHHH---HHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHH
Confidence 999999999852 222111 12233333 3344443332211111111000000 0000000
Q ss_pred hhh---------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCc
Q 003029 727 VEF---------------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (856)
Q Consensus 727 ~e~---------------~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~ 790 (856)
++ ......++.+.+ .+.+. ..+.+ ..+..++||.|+++|||.|++++++++| +++
T Consensus 143 -~~~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~ 213 (279)
T 4dw8_A 143 -DFLTDITLPVAKCLIVGDAGKLIPVESEL-CIRLQ-GKINVFRSEPYFLELVPQGIDKALSLSVLLENIG------MTR 213 (279)
T ss_dssp -CHHHHSCSCCSCEEEESCHHHHHHHHHHH-HHHTT-TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCG
T ss_pred -HHHHhhcCCceEEEEeCCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcC------CCH
Confidence 00 011223333444 21111 13454 4568899999999999999999999999 678
Q ss_pred ceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHHHH
Q 003029 791 DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNYLM 843 (856)
Q Consensus 791 d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~~~ 843 (856)
++++|||| +.||++| |+.+ +++|.+++.. + |-..+.+ -|.+.|++++.
T Consensus 214 ~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 4dw8_A 214 EEVIAIGD-GYNDLSM-IKFA---GMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFN 270 (279)
T ss_dssp GGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC-
T ss_pred HHEEEECC-ChhhHHH-HHHc---CcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHh
Confidence 99999999 9999999 8876 5899998852 2 6565544 38888887763
No 26
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=99.84 E-value=9.3e-21 Score=199.67 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=128.7
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc-c---Cce
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLW 663 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l---~lg 663 (856)
.+++|||++|+||||+++ +..++++++++|++|++ + +.|+|+|||+...+.+.++. + ..+
T Consensus 3 ~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~ 66 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDY 66 (246)
T ss_dssp -CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSE
T ss_pred CCCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCE
Confidence 356899999999999987 45689999999999986 6 99999999999888877762 2 247
Q ss_pred EEeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCcEEeeecceEEEE-e-ecCCh----hhhH
Q 003029 664 LAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWN-Y-KYADV----EFGR 731 (856)
Q Consensus 664 liaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~ie~k~~si~~~-y-~~~d~----e~~~ 731 (856)
+|++||++|...++. |...++..++.+....+.+.++.+. ....+.+.+.+...+.+. + +.... .+..
T Consensus 67 ~I~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (246)
T 2amy_A 67 VFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYE 146 (246)
T ss_dssp EESGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHH
T ss_pred EEECCCcEEEeCCcEEEeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhhee
Confidence 999999999864332 3322100013233333333333221 112344544333222221 1 11111 1111
Q ss_pred H-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---Ccc
Q 003029 732 I-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGK 802 (856)
Q Consensus 732 ~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~n 802 (856)
. ...++.+.+ .+.+....+.+.. +..++||.|+++|||.|+++| ++ +++++++||||+ +.|
T Consensus 147 ~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~------i~~~~viafGD~~~~~~N 216 (246)
T 2amy_A 147 LDKKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---EN------DGYKTIYFFGDKTMPGGN 216 (246)
T ss_dssp HHHHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TT------SCCSEEEEEECSCC---C
T ss_pred ecCCHHHHHHHHHHH-HHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hC------CCHHHEEEECCCCCCCCC
Confidence 1 012233334 2222222466654 678999999999999999999 67 678999999995 689
Q ss_pred cccccccccccCcceEEeCC
Q 003029 803 NCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 803 De~M~f~~~~~~~~~v~V~~ 822 (856)
|++| |++++ ..++.|+|
T Consensus 217 D~~M-l~~a~--~ag~av~N 233 (246)
T 2amy_A 217 DHEI-FTDPR--TMGYSVTA 233 (246)
T ss_dssp CCHH-HHCTT--EEEEECSS
T ss_pred cHHH-HHhCC--cceEEeeC
Confidence 9999 98763 22677776
No 27
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=99.84 E-value=9.7e-21 Score=201.73 Aligned_cols=208 Identities=18% Similarity=0.231 Sum_probs=127.8
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc---
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--- 659 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--- 659 (856)
..+|+..++|||++|+||||+++ +..++++++++|++|++ + +.|+|+|||+...+.+.++.
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~ 68 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDE 68 (262)
T ss_dssp --------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTT
T ss_pred cccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhc
Confidence 45677888999999999999987 45689999999999975 6 99999999999999888875
Q ss_pred -c--CceEEeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHh--------cCCCcEEeeecceEEEE-e-ecC
Q 003029 660 -Y--NLWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE--------RTPRSHFEQRETSLVWN-Y-KYA 725 (856)
Q Consensus 660 -l--~lgliaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~--------rt~gs~ie~k~~si~~~-y-~~~ 725 (856)
+ ..++|++||+++..+++. |...++..++ .+.+.++++...+ ...+.+++.+...+.+. + +..
T Consensus 69 ~~~~~~~~I~~NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (262)
T 2fue_A 69 VIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSC 145 (262)
T ss_dssp HHHHCSEEEEGGGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTC
T ss_pred ccccCCeEEECCCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCC
Confidence 2 247999999999863321 2111000012 3444444443221 12334443322222221 1 111
Q ss_pred Chh----hhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 726 DVE----FGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 726 d~e----~~~~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
+.+ +... ...++.+.+ ...+....+.+.. +..++||.|+++|||.|+++| ++ +++++++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~g------i~~~~via 215 (262)
T 2fue_A 146 TLEERIEFSELDKKEKIREKFVEAL-KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQ------DSFDTIHF 215 (262)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHH-HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TT------SCCSEEEE
T ss_pred cccccccEEEEcCCHHHHHHHHHHH-HHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HC------CCHHHEEE
Confidence 111 1101 112233334 2222222466654 567899999999999999999 77 67899999
Q ss_pred EecC---CcccccccccccccCcceEEeCC
Q 003029 796 IGHF---LGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 796 ~GD~---~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
|||. +.||++| |+.++. .++.|+|
T Consensus 216 fGDs~~~~~NDi~M-l~~~~~--~g~av~N 242 (262)
T 2fue_A 216 FGNETSPGGNDFEI-FADPRT--VGHSVVS 242 (262)
T ss_dssp EESCCSTTSTTHHH-HHSTTS--EEEECSS
T ss_pred ECCCCCCCCCCHHH-HhcCcc--CcEEecC
Confidence 9994 5899999 987632 3566665
No 28
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=99.83 E-value=1.4e-19 Score=193.34 Aligned_cols=214 Identities=15% Similarity=0.169 Sum_probs=147.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEe
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lglia 666 (856)
++|+|++|+||||+++ ...+++++ +++|++|.+ +|+.|+|+|||+...+.++++.++ .++|+
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLND--------------AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVA 66 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEE
T ss_pred CccEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEE
Confidence 4689999999999987 35688885 999999986 799999999999999999888774 58999
Q ss_pred eCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcC---------CCcEEeeecc------------eEE-----
Q 003029 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRET------------SLV----- 719 (856)
Q Consensus 667 enG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~gs~ie~k~~------------si~----- 719 (856)
+||+.+...++. +.. .++ .+.+.++++.+.+.. .+.+...... .+.
T Consensus 67 ~NGa~i~~~~~~i~~~----~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (271)
T 1rlm_A 67 ENGALVYEHGKQLFHG----ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDY 139 (271)
T ss_dssp GGGTEEEETTEEEEEC----CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCG
T ss_pred CCccEEEECCeEEEEe----cCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCch
Confidence 999999864332 222 233 345566665554321 1122211000 000
Q ss_pred ---------EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC
Q 003029 720 ---------WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (856)
Q Consensus 720 ---------~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~ 789 (856)
+... .+++ ...++.+.+ ...+. ..+.++ .+..++||.+++++||.+++++++++| ++
T Consensus 140 ~~~~~~~~ki~i~-~~~~----~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~------i~ 206 (271)
T 1rlm_A 140 QEIDDVLFKFSLN-LPDE----QIPLVIDKL-HVALD-GIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LS 206 (271)
T ss_dssp GGCCSCEEEEEEE-CCGG----GHHHHHHHH-HHHTT-TSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CC
T ss_pred hhCCCceEEEEEE-cCHH----HHHHHHHHH-HHHcC-CcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC------CC
Confidence 0000 0111 123344444 21111 135554 467899999999999999999999999 67
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~ 843 (856)
++++++||| +.||++| ++.+ +.+|.+++.. + |-..+..+ |.+.|+.++.
T Consensus 207 ~~~~~~~GD-~~nD~~m-~~~a---g~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 207 PQNVVAIGD-SGNDAEM-LKMA---RYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp GGGEEEEEC-SGGGHHH-HHHC---SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred HHHEEEECC-cHHHHHH-HHHc---CCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 899999999 9999999 8876 5678888752 2 66767655 9999998875
No 29
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=99.83 E-value=1e-19 Score=195.89 Aligned_cols=220 Identities=13% Similarity=0.227 Sum_probs=146.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-----eEE
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 665 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----gli 665 (856)
+|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I 69 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 69 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEE
Confidence 689999999999987 45689999999999986 7999999999999999999888753 699
Q ss_pred eeCceEEEe--cCCe-eeecccccCChHHHHHHHHHHHHHHh----cCC-CcEEeeecc-----------eEEEEe---e
Q 003029 666 AENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE----RTP-RSHFEQRET-----------SLVWNY---K 723 (856)
Q Consensus 666 aenG~~i~~--~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~----rt~-gs~ie~k~~-----------si~~~y---~ 723 (856)
++||+++.. .++. +.. .++.++...+.+.++.+.- .+. +.+.+.+.. .+.... .
T Consensus 70 ~~NGa~i~~~~~~~~i~~~----~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (282)
T 1rkq_A 70 TYNGALVQKAADGSTVAQT----ALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAE 145 (282)
T ss_dssp EGGGTEEEETTTCCEEEEC----CBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGG
T ss_pred EeCCeEEEECCCCeEEEEe----cCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchh
Confidence 999999986 3332 332 3454454545444443210 011 122221100 000000 0
Q ss_pred cC--Chhh-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE
Q 003029 724 YA--DVEF-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (856)
Q Consensus 724 ~~--d~e~-------~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v 793 (856)
.. +.+. ......++.+.+ ...+. ..+.++ ++..++||.|++++||.|+++++++++ ++++++
T Consensus 146 ~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~ 217 (282)
T 1rkq_A 146 KMDPNTQFLKVMMIDEPAILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKPEEI 217 (282)
T ss_dssp GSCTTCCBCEEEEECCHHHHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCGGGE
T ss_pred HhcccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhC------CCHHHE
Confidence 00 0000 001122333332 11000 135554 577899999999999999999999999 678999
Q ss_pred EEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHH
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYL 842 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~ 842 (856)
++||| +.||++| ++.+ +.+|.+++.. + |.+.+..+ |.+.|++++
T Consensus 218 ~~~GD-~~nD~~m-~~~a---g~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~ 270 (282)
T 1rkq_A 218 MAIGD-QENDIAM-IEYA---GVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 270 (282)
T ss_dssp EEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred EEECC-cHHHHHH-HHHC---CcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 99999 9999999 8876 4688887742 2 66766554 888888875
No 30
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.83 E-value=6.1e-20 Score=196.27 Aligned_cols=216 Identities=12% Similarity=0.181 Sum_probs=124.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----gl 664 (856)
++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+.+++..+++ ++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYA 68 (279)
T ss_dssp -CCEEEECC-------------------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEE
T ss_pred ceEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEE
Confidence 5799999999999987 45689999999999986 6999999999999999999988753 69
Q ss_pred EeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE-------------------------
Q 003029 665 AAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV------------------------- 719 (856)
Q Consensus 665 iaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~------------------------- 719 (856)
|++||+.+....+.+... ...+ .+.+.++++.+.+..-...+...+....
T Consensus 69 i~~nGai~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 3mpo_A 69 ITFNGSVAQTISGKVLTN--HSLT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREV 143 (279)
T ss_dssp EEGGGTEEEETTSCEEEE--CCCC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCG
T ss_pred EEcCcEEEECCCCCEEEe--cCCC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCH
Confidence 999999443333332211 1233 3445555555443311111111110000
Q ss_pred -----------EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCC
Q 003029 720 -----------WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 787 (856)
Q Consensus 720 -----------~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~ 787 (856)
+.+. .++ ....++.+.+ ...+. ..+.++ .+..++||.|+++|||.|++++++++|
T Consensus 144 ~~~~~~~~~~ki~~~-~~~----~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------ 210 (279)
T 3mpo_A 144 SETPRDLTISKAMFV-DYP----QVIEQVKANM-PQDFK-DRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLG------ 210 (279)
T ss_dssp GGSCTTCCCCEEEEE-CCH----HHHHHHHHHC-CHHHH-HHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTT------
T ss_pred HHhhccCCcEEEEEc-CCH----HHHHHHHHHH-HHHhC-CCEEEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 0000 011 1122233333 11001 125544 467899999999999999999999999
Q ss_pred CCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~ 843 (856)
+++++++|||| +.||++| |+++ +++|.++|.. + |-..+..+ |.+.|++++.
T Consensus 211 i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 3mpo_A 211 LTADDVMTLGD-QGNDLTM-IKYA---GLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL 270 (279)
T ss_dssp CCGGGEEEC---CCTTHHH-HHHS---TEECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred CCHHHEEEECC-chhhHHH-HHhc---CceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence 67899999999 9999999 8877 5777777642 2 54544433 7777777653
No 31
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=99.82 E-value=3.1e-19 Score=194.17 Aligned_cols=221 Identities=13% Similarity=0.169 Sum_probs=145.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh--cccC-----
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF--QEYN----- 661 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~--~~l~----- 661 (856)
..+|||++|+||||++.. +..++++++++|++|.+ .|+.|+|+|||++..+..++ ..++
T Consensus 25 M~ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~ 90 (301)
T 2b30_A 25 ADIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFY 90 (301)
T ss_dssp CCCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCC
T ss_pred ccccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccC
Confidence 357999999999999861 24589999999999986 69999999999999999988 7655
Q ss_pred -ceEEeeCceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC---------C-CcEEeee-cce--------EE
Q 003029 662 -LWLAAENGMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT---------P-RSHFEQR-ETS--------LV 719 (856)
Q Consensus 662 -lgliaenG~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~-gs~ie~k-~~s--------i~ 719 (856)
.++|++||+++.. .++. +.. .++. +.+.++++...+.. . +.+.+.. ... ..
T Consensus 91 ~~~~I~~NGa~i~~~~~~~i~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 163 (301)
T 2b30_A 91 GMPGVYINGTIVYDQIGYTLLDE----TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSEN 163 (301)
T ss_dssp SCSEEEGGGTEEECTTCCEEEEC----CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCC
T ss_pred CCeEEEcCCeEEEeCCCCEEEEc----cCCH---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccC
Confidence 3699999999986 3332 222 2343 33444444332211 1 1111110 000 00
Q ss_pred EEeecCChhhh-------------HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCc
Q 003029 720 WNYKYADVEFG-------------RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKK 785 (856)
Q Consensus 720 ~~y~~~d~e~~-------------~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~ 785 (856)
++++..+.++. .....++.+.+ ...+. ..+.++. +..++||.|++++||.|++.+++++|
T Consensus 164 ~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~---- 237 (301)
T 2b30_A 164 RSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNL-KQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN---- 237 (301)
T ss_dssp CCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHH-HHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTT----
T ss_pred CceeecchhhhccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcC----
Confidence 00110000000 00122333333 21111 2466655 56889999999999999999999999
Q ss_pred CCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccC-CH--HHHHHHHHHHHH
Q 003029 786 MKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLR-MK--MCMRFLSQNYLM 843 (856)
Q Consensus 786 ~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~-~~--~~~~~~l~~~~~ 843 (856)
++++++++||| +.||++| |+.+ +++|.+++.. + |.+. +. .-|.+.|++++.
T Consensus 238 --~~~~~~~~~GD-~~nD~~m-~~~a---g~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~ 298 (301)
T 2b30_A 238 --ISNDQVLVVGD-AENDIAM-LSNF---KYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 298 (301)
T ss_dssp --CCGGGEEEEEC-SGGGHHH-HHSC---SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred --CCHHHEEEECC-CHHHHHH-HHHc---CCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHh
Confidence 67899999999 9999999 8876 5688888752 2 6666 54 358999988864
No 32
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=99.82 E-value=2.3e-19 Score=192.48 Aligned_cols=192 Identities=16% Similarity=0.158 Sum_probs=130.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc---eEE
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLA 665 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---gli 665 (856)
.++|||++|+||||++. ...++++++++|++|.+ +|+.|+|+|||+...+..++..+++ ++|
T Consensus 7 m~~~li~~DlDGTLl~~--------------~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I 71 (275)
T 1xvi_A 7 QQPLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLI 71 (275)
T ss_dssp CCCEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEE
T ss_pred cCceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEE
Confidence 35799999999999986 23466789999999986 7999999999999999999988753 699
Q ss_pred eeCceEEE-ecCCe-------eeecccccCChHHHHHHHHHHHHHHhcCCCcEEee------------------------
Q 003029 666 AENGMFLR-CTTGK-------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ------------------------ 713 (856)
Q Consensus 666 aenG~~i~-~~~~~-------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~------------------------ 713 (856)
++||+++. ..++. +... ++. +.+.++++.+.......+...
T Consensus 72 ~~NGa~i~~~~~~~~~~~~~~~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (275)
T 1xvi_A 72 AENGAVIQLAEQWQEIDGFPRIISG----ISH---GEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQL 144 (275)
T ss_dssp EGGGTEEECCTTCTTSTTTTEEECS----SCH---HHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHC
T ss_pred EeCCCeEEecCcccccCceEEEecC----CCH---HHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHh
Confidence 99999997 32111 3322 332 334444443322111111000
Q ss_pred ecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhC-cCCcCCCCcce
Q 003029 714 RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV-HSKKMKTAIDY 792 (856)
Q Consensus 714 k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~-~~~~~~~~~d~ 792 (856)
+.....+.+. .+++ ...++.+.+ .. ..+.++.+..++||.|++++||.|+++++++++ ++ +++
T Consensus 145 ~~~~~~~~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~------~~~ 208 (275)
T 1xvi_A 145 HEASVTLIWR-DSDE----RMAQFTARL-NE----LGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS------GKR 208 (275)
T ss_dssp CSSCEEEEEC-SCHH----HHHHHHHHH-HH----TTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH------SSC
T ss_pred hccCceeEec-CCHH----HHHHHHHHH-Hh----hCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcc------ccc
Confidence 0011111221 1111 122334444 22 246777777889999999999999999999988 53 567
Q ss_pred --EEEEecCCcccccccccccccCcceEEeCCC
Q 003029 793 --VLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 793 --vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
+++||| +.||++| |+.+ +.+|.|++.
T Consensus 209 ~~~~~~GD-~~nD~~m-~~~a---g~~va~~n~ 236 (275)
T 1xvi_A 209 PTTLGLGD-GPNDAPL-LEVM---DYAVIVKGL 236 (275)
T ss_dssp CEEEEEES-SGGGHHH-HHTS---SEEEECCCC
T ss_pred CcEEEECC-ChhhHHH-HHhC---CceEEecCC
Confidence 999999 9999999 8876 567888774
No 33
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.82 E-value=2.8e-19 Score=190.10 Aligned_cols=205 Identities=15% Similarity=0.183 Sum_probs=141.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-ceEEeeCc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAENG 669 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-lgliaenG 669 (856)
+|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+.+++..++ .++|++||
T Consensus 5 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nG 69 (274)
T 3fzq_A 5 YKLLILDIDGTLRDE--------------VYGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGG 69 (274)
T ss_dssp CCEEEECSBTTTBBT--------------TTBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTT
T ss_pred ceEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCc
Confidence 699999999999987 34689999999999986 799999999999999999888885 36899999
Q ss_pred eEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecc--------------------------------
Q 003029 670 MFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET-------------------------------- 716 (856)
Q Consensus 670 ~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~-------------------------------- 716 (856)
+++...++. +.. ..+. +.+.++++.+.+..-...+.....
T Consensus 70 a~i~~~~~~~~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (274)
T 3fzq_A 70 NYIQYHGELLYNQ----SFNQ---RLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEK 142 (274)
T ss_dssp TEEEETTEEEEEC----CCCH---HHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSS
T ss_pred cEEEECCEEEEEc----CCCH---HHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhh
Confidence 999864332 222 2333 344444444433211111111100
Q ss_pred ----------------eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcC--cEEEEEeCCCCHHHHHHHHH
Q 003029 717 ----------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGS--KSVEVRAVGVTKGAAIDRIL 777 (856)
Q Consensus 717 ----------------si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v-~~g~--~~vEV~p~gvnKG~av~~ll 777 (856)
.+.+. .++ .....+.+.+ .. .+.+ ..+. .++||.|++++||.|+++++
T Consensus 143 ~~~~~~~~~~~~~~~~ki~~~---~~~----~~~~~~~~~l-~~-----~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 209 (274)
T 3fzq_A 143 ITYENNIEEYKSQDIHKICLW---SNE----KVFDEVKDIL-QD-----KMELAQRDISSQYYEIIQKDFHKGKAIKRLQ 209 (274)
T ss_dssp SCCCCCGGGCSSCCCCEEEEE---CCH----HHHHHHHHHH-GG-----GEEEEEEEGGGTEEEEEETTCSHHHHHHHHH
T ss_pred cccccchhhhcccCeEEEEEE---cCH----HHHHHHHHHh-hc-----ceEEEeccCCCceEEEeeCCCCHHHHHHHHH
Confidence 00000 111 1233445555 22 1343 3445 89999999999999999999
Q ss_pred HHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHH
Q 003029 778 AEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNY 841 (856)
Q Consensus 778 ~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~ 841 (856)
+++| +++++++|||| +.||++| ++++ +++|.+++.. + |-..+.. -|.+.|+++
T Consensus 210 ~~lg------i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 210 ERLG------VTQKETICFGD-GQNDIVM-FQAS---DVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHT------CCSTTEEEECC-SGGGHHH-HHTC---SEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHcC------CCHHHEEEECC-ChhHHHH-HHhc---CceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 9999 67899999999 9999999 8877 4888888752 2 5555544 366666654
No 34
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=99.82 E-value=2e-19 Score=192.07 Aligned_cols=217 Identities=13% Similarity=0.120 Sum_probs=141.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc---eEEee
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAAE 667 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---gliae 667 (856)
+|+|++|+||||+++ ...++++++++|++ . +.|+.|+|+|||+...+.+++..+++ ++|++
T Consensus 2 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~-~-~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~ 65 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEK-L-SRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (268)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHH-H-TTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred ccEEEEeCCCcCCCC--------------CCccCHHHHHHHHH-H-hCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEe
Confidence 589999999999987 45689999999999 6 47999999999999999999988854 69999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CCCcEEeeec---------ceEEEE-eecCChhh
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRE---------TSLVWN-YKYADVEF 729 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~ie~k~---------~si~~~-y~~~d~e~ 729 (856)
||+.+...++.. +....++.+ .+.++++.+.+. ..+.+.+.+. ..+... +... .++
T Consensus 66 NGa~i~~~~~~~--i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 139 (268)
T 1nf2_A 66 NGAIVYLPEEGV--ILNEKIPPE---VAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNL-SEL 139 (268)
T ss_dssp GGTEEEETTTEE--EEECCBCHH---HHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTH-HHH
T ss_pred CCeEEECCCCCE--EEecCCCHH---HHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCH-HHh
Confidence 999998622232 111223433 344444444322 1112221110 000000 0000 000
Q ss_pred h-------------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 730 G-------------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 730 ~-------------~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
. .....++.+.+ ...+. ..+.++ .+..++||.|++++||.+++.++++++ ++++++++
T Consensus 140 ~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~ 211 (268)
T 1nf2_A 140 VSKMGTTKLLLIDTPERLDELKEIL-SERFK-DVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVV 211 (268)
T ss_dssp HHHHCBSEEEEECCHHHHHHHHHHH-HHHHT-TTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEecCceEEEeCCCCChHHHHHHHHHHcC------CCHHHeEE
Confidence 0 01122333333 11111 235554 567899999999999999999999999 67899999
Q ss_pred EecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHHH
Q 003029 796 IGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNYL 842 (856)
Q Consensus 796 ~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~~ 842 (856)
||| +.||++| ++.+ +.+|.+++.. + |.+.+.. -|.++|+.++
T Consensus 212 ~GD-~~nD~~~-~~~a---g~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 212 FGD-NENDLFM-FEEA---GLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp EEC-SHHHHHH-HTTC---SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred EcC-chhhHHH-HHHc---CCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 999 9999999 8866 5688888742 2 6665543 4777776654
No 35
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.81 E-value=3.8e-19 Score=188.91 Aligned_cols=214 Identities=12% Similarity=0.080 Sum_probs=139.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-ceEEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-lgliaen 668 (856)
.+|+|+||+||||++.. ...++++++++|++|.+ .|+.|+++|||+...+ +.+..++ .++|++|
T Consensus 11 miKli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~n 75 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFE-------------THKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALN 75 (268)
T ss_dssp CCCEEEECSBTTTBCTT-------------TCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGG
T ss_pred ceEEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeC
Confidence 47999999999999842 35689999999999997 6999999999999887 4566664 4789999
Q ss_pred ceEE-EecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHH---------------
Q 003029 669 GMFL-RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI--------------- 732 (856)
Q Consensus 669 G~~i-~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~--------------- 732 (856)
|+.+ ...++.. ....++ .+.+.++++.+.+..-...+...+... .....+.+...
T Consensus 76 Ga~i~~~~~~~~---~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (268)
T 3r4c_A 76 GAECVLRDGSVI---RKVAIP---AQDFRKSMELAREFDFAVALELNEGVF---VNRLTPTVEQIAGIVEHPVPPVVDIE 146 (268)
T ss_dssp GTEEEETTSCEE---EECCCC---HHHHHHHHHHHHHTTCEEEEEETTEEE---ESCCCHHHHHHHHHHTCCCCCBCCHH
T ss_pred CcEEEEcCCeEE---EEecCC---HHHHHHHHHHHHHcCcEEEEEECCEEE---EeCCcHHHHHHHHHcCCCCCcccchH
Confidence 9999 7543321 112234 344555555543321111122111110 00001110000
Q ss_pred -H-------------HHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 733 -Q-------------ARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 733 -q-------------a~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
. ..+....+... + ..+.+ ..+..++||.|+++|||.|++++++++| ++++++++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~G 217 (268)
T 3r4c_A 147 EMFERKECCQLCFYFDEEAEQKVMPL-L--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYR------VKVSEIMACG 217 (268)
T ss_dssp HHHHHSCCCCEEEECCHHHHHHHGGG-C--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT------CCGGGEEEEE
T ss_pred HHhccCceEEEEEecChHHHHHHHHh-C--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0 00111122111 1 23443 4567899999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNY 841 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~ 841 (856)
| +.||++| |+.+ +++|.++|.. + |-..+..+ |.+.|++|
T Consensus 218 D-~~NDi~m-~~~a---g~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 218 D-GGNDIPM-LKAA---GIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp C-SGGGHHH-HHHS---SEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred C-cHHhHHH-HHhC---CCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 9 9999999 8876 6889998852 3 55555433 77777665
No 36
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.81 E-value=4.4e-19 Score=174.19 Aligned_cols=162 Identities=14% Similarity=0.078 Sum_probs=123.9
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003029 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (856)
Q Consensus 363 ~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (856)
+.+|+++||+.+.||+..+++|+..+ +++|+ +.|+++|. ++....+ ++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~----~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKI----KLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHH----HHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHH----HHHHHHcCC--------eEE
Confidence 46899999999999999999999987 44454 55887763 2333333 344433322 244
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCc-eEEEeC-CCCchhhccCCeEEECCCCHHHHHHH
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSE-FAGAAQSLGAGAILVNPWNITEVANA 520 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g-~lVlSe-~aG~~~~lg~~g~lVnP~d~~~lA~a 520 (856)
+ |.++.+++..+|+.||++++||..||||++++||||| |. |+|+|. .+|..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~----G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV----GIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT----TCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc----CCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 9999999999999999999999999999999999999 46 777744 55555665566779999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 521 i~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
|.++++. ++.+.++.++++++++.+++..+++
T Consensus 134 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999995 5577888888888898888877664
No 37
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.81 E-value=2.3e-19 Score=187.17 Aligned_cols=208 Identities=15% Similarity=0.126 Sum_probs=140.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliae 667 (856)
.+|+|++|+||||++. ...++++++++|++|++ .|+.|+|+|||+...+..++..+++ ++|++
T Consensus 4 m~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~ 68 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGE 68 (227)
T ss_dssp CCCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred ceEEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEe
Confidence 3689999999999986 35689999999999986 7999999999999999999988754 59999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcC--CCcEEee-ecceEEEEeecCChhhhHHHHHHHHHHHhcC
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--PRSHFEQ-RETSLVWNYKYADVEFGRIQARDMLQHLWTG 744 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt--~gs~ie~-k~~si~~~y~~~d~e~~~~qa~el~~~L~~~ 744 (856)
||+++...++.... ....+ +.+.++ +...+.. ...+... +-..+.......++ +..+.+.+.
T Consensus 69 NGa~i~~~~~~~i~-~~~~l-----~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 133 (227)
T 1l6r_A 69 NGGIMFDNDGSIKK-FFSNE-----GTNKFL-EEMSKRTSMRSILTNRWREASTGFDIDPEDV--------DYVRKEAES 133 (227)
T ss_dssp GGTEEECTTSCEEE-SSCSH-----HHHHHH-HHHTTTSSCBCCGGGGGCSSSEEEBCCGGGH--------HHHHHHHHT
T ss_pred CCcEEEeCCCCEEE-EeccH-----HHHHHH-HHHHHHhcCCccccccceecccceEEecCCH--------HHHHHHHHh
Confidence 99999852233210 11111 444444 4332200 0000000 00000000000011 112222133
Q ss_pred CCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 745 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 745 ~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
+ .+.++++..++||.|++++||.++++++++++ ++++++++||| +.||++| |+.+ +.+|.+++..
T Consensus 134 -~---~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~------~~~~~~~~iGD-~~nD~~m-~~~a---g~~va~~n~~ 198 (227)
T 1l6r_A 134 -R---GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPM-FQLP---VRKACPANAT 198 (227)
T ss_dssp -T---TEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHH-HTSS---SEEEECTTSC
T ss_pred -c---CEEEEecCcEEEEecCCCCHHHHHHHHHHHhC------cCHHHEEEECC-cHHhHHH-HHHc---CceEEecCch
Confidence 2 46666788999999999999999999999998 66889999999 9999999 8876 5678887652
Q ss_pred -------ccccCCH--HHHHHHHHHHH
Q 003029 825 -------LHYLRMK--MCMRFLSQNYL 842 (856)
Q Consensus 825 -------~~~l~~~--~~~~~~l~~~~ 842 (856)
.|-+.+. .-|.++|+.++
T Consensus 199 ~~~k~~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 199 DNIKAVSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp HHHHHHCSEECSCCTTHHHHHHHHHTT
T ss_pred HHHHHhCCEEecCCCCcHHHHHHHHHh
Confidence 2666554 45888887765
No 38
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.81 E-value=7.7e-19 Score=185.81 Aligned_cols=211 Identities=11% Similarity=0.147 Sum_probs=139.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-eEEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-WLAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-gliaen 668 (856)
++|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..+++ ++|+.|
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~n 66 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDE--------------QKQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFN 66 (258)
T ss_dssp CCCEEEECTBTTTBCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGG
T ss_pred CceEEEEeCCCCCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECC
Confidence 3689999999999987 34689999999999986 7999999999999999888887743 589999
Q ss_pred ceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEE-----------------eecCChhh-
Q 003029 669 GMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWN-----------------YKYADVEF- 729 (856)
Q Consensus 669 G~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~-----------------y~~~d~e~- 729 (856)
|+++...++. +.. ..+ .+.+.++++.+.+..-...+..... +... +......+
T Consensus 67 Ga~i~~~~~~i~~~----~~~---~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (258)
T 2pq0_A 67 GQYVVFEGNVLYKQ----PLR---REKVRALTEEAHKNGHPLVFMDAEK-MRASIGDHPHIHVSMASLKFAHPPVDPLYY 138 (258)
T ss_dssp GTEEEETTEEEEEC----CCC---HHHHHHHHHHHHHTTCCEEEECSSC-EEESSSSCHHHHHHHHHTTCCCCCBCTTGG
T ss_pred CCEEEECCEEEEEe----cCC---HHHHHHHHHHHHhCCCeEEEEeCCc-EEEecCCcHHHHHHHHhhcCCccccccchh
Confidence 9999864332 222 223 3555666665543211111110000 0000 00000000
Q ss_pred -----------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEE
Q 003029 730 -----------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (856)
Q Consensus 730 -----------~-~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~ 796 (856)
+ ......+.+.+ ..+.+. ++..++||.|+++|||.|++++++++| +++++++||
T Consensus 139 ~~~~~~k~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~ 205 (258)
T 2pq0_A 139 ENKDIYQALLFCRAEEEEPYVRNY-------PEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLG------IDKKDVYAF 205 (258)
T ss_dssp GGSCCCEEEECSCHHHHHHHHHHC-------TTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHT------CCGGGEEEE
T ss_pred hccCceEEEEECCHHHHHHHHHhC-------CCeEEEEeCCceEEEEECCCChHHHHHHHHHHhC------CCHHHEEEE
Confidence 0 00111111111 134443 467899999999999999999999999 678999999
Q ss_pred ecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHH
Q 003029 797 GHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNY 841 (856)
Q Consensus 797 GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~ 841 (856)
|| +.||++| |+.+ +.+|.++|.. + |-..+.. -|.+.|+++
T Consensus 206 GD-s~NDi~m-l~~a---g~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~ 254 (258)
T 2pq0_A 206 GD-GLNDIEM-LSFV---GTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQL 254 (258)
T ss_dssp CC-SGGGHHH-HHHS---SEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHT
T ss_pred CC-cHHhHHH-HHhC---CcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHh
Confidence 99 9999999 8866 5688888742 2 5444443 377777665
No 39
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=99.81 E-value=2.3e-18 Score=185.70 Aligned_cols=214 Identities=11% Similarity=0.156 Sum_probs=142.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliaen 668 (856)
.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..+++ .+|++|
T Consensus 4 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 68 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 68 (288)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred eEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcC
Confidence 689999999999987 45689999999999986 7999999999999999999988753 699999
Q ss_pred ceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC--------CCcEEeeec------c---e------------
Q 003029 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRE------T---S------------ 717 (856)
Q Consensus 669 G~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~ie~k~------~---s------------ 717 (856)
|+.+.. .++. +.. ..+ .+.+.++++...+.. .+.+.+... . .
T Consensus 69 Ga~i~~~~~~~~~~~----~~~---~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (288)
T 1nrw_A 69 GAVIHDPEGRLYHHE----TID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVL 141 (288)
T ss_dssp GTEEECTTCCEEEEC----CCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred CeEEEcCCCcEEEEe----eCC---HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHH
Confidence 999986 3222 222 223 345555555443221 111111000 0 0
Q ss_pred ----------EEEEeecCChhh-----------------hHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCH
Q 003029 718 ----------LVWNYKYADVEF-----------------GRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTK 769 (856)
Q Consensus 718 ----------i~~~y~~~d~e~-----------------~~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnK 769 (856)
..+.+...-.++ ......++.+.+ .. . ..+.++. +..++||.|++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l-~~-~--~~~~~~~s~~~~lei~~~~~~K 217 (288)
T 1nrw_A 142 KQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRY-EH-A--EDLTLVSSAEHNFELSSRKASK 217 (288)
T ss_dssp HHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHH-TT-C--TTEEEECSSTTEEEEEETTCSH
T ss_pred HhhhhhhhhcCCceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHH-hh-C--CCEEEEeeCCCcEEEecCCCCh
Confidence 001110000000 012233445555 33 1 2466654 56899999999999
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~ 840 (856)
|.|++.+++++| ++++++++||| +.||++| ++.+ +++|.|++.. + |-+.+..+ |.+.|++
T Consensus 218 ~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~m-~~~a---g~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 218 GQALKRLAKQLN------IPLEETAAVGD-SLNDKSM-LEAA---GKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp HHHHHHHHHHTT------CCGGGEEEEES-SGGGHHH-HHHS---SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHH-HHHc---CcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 999999999999 67899999999 9999999 8876 5688887642 2 55555443 6666665
Q ss_pred H
Q 003029 841 Y 841 (856)
Q Consensus 841 ~ 841 (856)
+
T Consensus 287 ~ 287 (288)
T 1nrw_A 287 L 287 (288)
T ss_dssp T
T ss_pred h
Confidence 4
No 40
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=99.80 E-value=1.4e-19 Score=190.74 Aligned_cols=190 Identities=15% Similarity=0.195 Sum_probs=128.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----ceEEee
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAAE 667 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----lgliae 667 (856)
+||++|+||||+++ +..+ ++++++|+++. .|+.|+|+|||++..+.++++.++ .++|++
T Consensus 4 ~li~~DlDGTLl~~--------------~~~~-~~~~~~l~~~~--~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~ 66 (244)
T 1s2o_A 4 LLLISDLDNTWVGD--------------QQAL-EHLQEYLGDRR--GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTA 66 (244)
T ss_dssp EEEEECTBTTTBSC--------------HHHH-HHHHHHHHTTG--GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEET
T ss_pred eEEEEeCCCCCcCC--------------HHHH-HHHHHHHHHhc--CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEEC
Confidence 59999999999986 2223 68899999965 379999999999999999988853 479999
Q ss_pred CceEEEecC---CeeeecccccCChHH-HHHHHHHHHHHHhcCCCcEE----eeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 668 NGMFLRCTT---GKWMTTMPEHLNMEW-VDSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 668 nG~~i~~~~---~~w~~~~~~~~~~~w-~~~v~~i~~~~~~rt~gs~i----e~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
||+++.... ..|...+ +..| .+.+..++..+ ++... +.+...+.+++..... .....++.+
T Consensus 67 NGa~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ki~~~~~~~~~---~~~~~~l~~ 135 (244)
T 1s2o_A 67 VGSEIYHPEGLDQHWADYL----SEHWQRDILQAIADGF----EALKPQSPLEQNPWKISYHLDPQAC---PTVIDQLTE 135 (244)
T ss_dssp TTTEEEETTEECHHHHHHH----HTTCCHHHHHHHHHTC----TTEEECCGGGCBTTBEEEEECTTSC---THHHHHHHH
T ss_pred CCcEEEeCCCcChHHHHHH----hccccHHHHHHHHHhc----cCccccCcccCCCeEEEEEeChhhH---HHHHHHHHH
Confidence 999998531 1122111 1112 22233333222 22111 1233445555432211 112234444
Q ss_pred HHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE
Q 003029 740 HLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV 818 (856)
Q Consensus 740 ~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v 818 (856)
.+ ... ...+.++ ++..++||.|++++||.|+++++++++ ++++++++||| +.||++| |+.+ +.+|
T Consensus 136 ~~-~~~--~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~~~GD-~~nD~~m-~~~~---g~~v 201 (244)
T 1s2o_A 136 ML-KET--GIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGL-FETS---ARGV 201 (244)
T ss_dssp HH-HTS--SCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHH-HTSS---SEEE
T ss_pred HH-Hhc--CCCeEEEEecCceEEeccCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHH-Hhcc---CcEE
Confidence 45 332 2256664 467899999999999999999999998 67899999999 9999999 8854 5688
Q ss_pred EeCCC
Q 003029 819 RLDSS 823 (856)
Q Consensus 819 ~V~~~ 823 (856)
.+++.
T Consensus 202 a~~na 206 (244)
T 1s2o_A 202 IVRNA 206 (244)
T ss_dssp ECTTC
T ss_pred EEcCC
Confidence 88764
No 41
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.80 E-value=7.2e-19 Score=199.74 Aligned_cols=161 Identities=9% Similarity=0.036 Sum_probs=125.6
Q ss_pred EEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 003029 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (856)
Q Consensus 327 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rl-d~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~ 405 (856)
++.++|+|+|.+.|.+... ...+++.|+++||+ .+.||++.+|+||+.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 5788999999887753210 12356789999996 68999999999999998888862 125588787
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
.+.. . .+ .+.. ..|+ |.|.++.+++.++|+.||+||+||.+||||++++|||||+
T Consensus 284 ~~~~-~---------------~~----l~~~--~~v~-f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHK-D---------------IA----LGKG--IHLN-SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCC-C---------------EE----EETT--EEEE-EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCch-h---------------hh----cCCc--CcEE-EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 4321 0 01 1111 1355 5899999999999999999999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCH
Q 003029 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
.|||++ .+|..+.+ |.+|++|+|.|++++|++|.++++++.
T Consensus 339 --~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 339 --LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp --CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred --CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 788875 45777766 568999999999999999999998654
No 42
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=99.80 E-value=4.3e-19 Score=187.51 Aligned_cols=185 Identities=16% Similarity=0.116 Sum_probs=123.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+|++|+||||+ . ...++ +++++|++|.+ +|+.|+|+|||+...+..++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl-~--------------~~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~N 64 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P--------------GYEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (249)
T ss_dssp EEEEEECCSTTTC-T--------------TSCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred ccEEEEeCCCCcc-C--------------CCCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeC
Confidence 4899999999999 5 22344 49999999986 799999999999999999998875 4899999
Q ss_pred ceEEEecC-------------CeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEe-----------------------
Q 003029 669 GMFLRCTT-------------GKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE----------------------- 712 (856)
Q Consensus 669 G~~i~~~~-------------~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie----------------------- 712 (856)
|++|...+ +.+... ..++. +.+.++++.+.+.. +....
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~i~~--~~l~~---~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (249)
T 2zos_A 65 GSAIFIPKGYFPFDVKGKEVGNYIVIE--LGIRV---EKIREELKKLENIY-GLKYYGNSTKEEIEKFTGMPPELVPLAM 138 (249)
T ss_dssp TTEEECCTTCCC------CCCCCCEEE--CSCCH---HHHHHHHHHHHHHH-TCEEGGGSCHHHHHHHHCCCTTTHHHHH
T ss_pred CeEEEccCCcccccccccccCceEEEe--cCCCH---HHHHHHHHHHHhhc-CEEEecCCCHHHHHHHhCCChhHhhhhh
Confidence 99998532 222111 12332 33344443332210 00000
Q ss_pred eecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCC-Ccc
Q 003029 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT-AID 791 (856)
Q Consensus 713 ~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~-~~d 791 (856)
.+.....+.+.. +++. .+.+ .. ..+.++.+..++||.| ++|||.|+++|+++++ + +++
T Consensus 139 ~~~~~~~~~~~~-~~~~--------~~~l-~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~------~~~~~ 197 (249)
T 2zos_A 139 EREYSETIFEWS-RDGW--------EEVL-VE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYK------RLGQI 197 (249)
T ss_dssp CCSSCEEEEECS-SSCH--------HHHH-HH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHH------TTSCE
T ss_pred hhhhcCceEecC-CHHH--------HHHH-Hh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhc------cCCCc
Confidence 000000011111 1111 1222 11 1456666667899999 9999999999999988 5 579
Q ss_pred eEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 792 YVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 792 ~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
+++|||| +.||++| |+.+ +.+|.+++..
T Consensus 198 ~viafGD-~~NDi~M-l~~a---g~~va~gna~ 225 (249)
T 2zos_A 198 ESYAVGD-SYNDFPM-FEVV---DKVFIVGSLK 225 (249)
T ss_dssp EEEEEEC-SGGGHHH-HTTS---SEEEEESSCC
T ss_pred eEEEECC-CcccHHH-HHhC---CcEEEeCCCC
Confidence 9999999 9999999 9876 5688888753
No 43
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.79 E-value=4.2e-18 Score=177.70 Aligned_cols=209 Identities=13% Similarity=0.140 Sum_probs=146.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ ..+|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (231)
T 1wr8_A 3 IKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAED 67 (231)
T ss_dssp CCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eeEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeC
Confidence 689999999999987 35689999999999986 799999999999999998888774 3599999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEee-ec---ceEEEEeecCChhhhHHHHHHHHHHHhcC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ-RE---TSLVWNYKYADVEFGRIQARDMLQHLWTG 744 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~-k~---~si~~~y~~~d~e~~~~qa~el~~~L~~~ 744 (856)
|+.+...+ ... ....+ +.+.++++.+.+..||..++. +. ..+.+.....+++ ...++.+.+ .
T Consensus 68 Ga~i~~~~-~~~--~~~~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~- 133 (231)
T 1wr8_A 68 GGAISYKK-KRI--FLASM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL-N- 133 (231)
T ss_dssp GTEEEETT-EEE--ESCCC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT-T-
T ss_pred CcEEEeCC-EEE--EeccH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHH----HHHHHHHhc-C-
Confidence 99987632 221 11112 344555555442334433210 00 0111111011221 223344433 1
Q ss_pred CCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-
Q 003029 745 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS- 823 (856)
Q Consensus 745 ~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~- 823 (856)
..+.++.+..++||.|++.+|+.+++++++++| ++++++++||| +.||++| ++.+ +++|.|++.
T Consensus 134 ----~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD-~~nD~~~-~~~a---g~~v~~~~~~ 198 (231)
T 1wr8_A 134 ----LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDA-FKVV---GYKVAVAQAP 198 (231)
T ss_dssp ----CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSC
T ss_pred ----CcEEEEecCcEEEEecCCCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHc---CCeEEecCCC
Confidence 245656777899999999999999999999999 56899999999 9999999 8766 566778764
Q ss_pred -----Cc-cccCCHHH--HHHHHHHHHH
Q 003029 824 -----FL-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 824 -----~~-~~l~~~~~--~~~~l~~~~~ 843 (856)
.+ |-+.+..+ |.++|+.++.
T Consensus 199 ~~~~~~a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 199 KILKENADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp HHHHTTCSEECSSCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCEEecCCCcchHHHHHHHHHH
Confidence 22 77777665 9999988873
No 44
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.77 E-value=1.2e-18 Score=184.83 Aligned_cols=213 Identities=15% Similarity=0.189 Sum_probs=139.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccC-CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----c-eEE
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELK-LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----L-WLA 665 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~-~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l-gli 665 (856)
|+|+||+||||++. +.. ++++++++|++|++ .|+.|+++|||+ ..+.+++..++ + ++|
T Consensus 3 kli~~DlDGTLl~~--------------~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i 66 (261)
T 2rbk_A 3 KALFFDIDGTLVSF--------------ETHRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYI 66 (261)
T ss_dssp CEEEECSBTTTBCT--------------TTSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEE
T ss_pred cEEEEeCCCCCcCC--------------CCCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEE
Confidence 89999999999987 344 89999999999986 799999999999 88877766554 3 689
Q ss_pred eeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhc-CC-------CcEEeeecceEE-EEeecC--------Ch
Q 003029 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER-TP-------RSHFEQRETSLV-WNYKYA--------DV 727 (856)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r-t~-------gs~ie~k~~si~-~~y~~~--------d~ 727 (856)
++||+++...++. +.. .++. +.+.++++...+. .+ +.+.+.....+. .++... .+
T Consensus 67 ~~nGa~i~~~~~~i~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (261)
T 2rbk_A 67 TMNGAYCFVGEEVIYKS----AIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSF 139 (261)
T ss_dssp EGGGTEEEETTEEEEEC----CCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCH
T ss_pred EeCCEEEEECCEEEEec----CCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCcccc
Confidence 9999999863322 222 2343 3344444433322 11 112211000000 000000 00
Q ss_pred hhhH---------HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 728 EFGR---------IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 728 e~~~---------~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
++.. ....+....+ ...+. .+.++. +..++||.|++++||.+++++++++| ++++++++||
T Consensus 140 ~~~~~~~~~k~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iG 210 (261)
T 2rbk_A 140 EEASNKEVIQMTPFITEEEEKEV-LPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFG 210 (261)
T ss_dssp HHHHTSCCSEEEECCCHHHHHHH-GGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEE
T ss_pred chhccCceeEEEEEeCHHHHHHH-HHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0000 0000111123 22222 355554 56799999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC-------ccccCCHHH--HHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF-------LHYLRMKMC--MRFLSQNY 841 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~-------~~~l~~~~~--~~~~l~~~ 841 (856)
| +.||++| ++.+ +.+|.+++.. .|.+.+..+ |.++|+++
T Consensus 211 D-~~nD~~~-~~~a---g~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 211 D-GGNDISM-LRHA---AIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp C-SGGGHHH-HHHS---SEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred C-CHHHHHH-HHHc---CceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 9 9999999 8876 5678887642 288889999 99998876
No 45
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.76 E-value=8.5e-18 Score=187.17 Aligned_cols=279 Identities=13% Similarity=0.127 Sum_probs=176.1
Q ss_pred HhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh-h-cCCEEEEeCHHHHHHHHH
Q 003029 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-L-AADLVGFHTYDYARHFVS 304 (856)
Q Consensus 227 ~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l-l-~aDlIgf~t~~~~~~Fl~ 304 (856)
+..+ .|+|++|+.....++..+..+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+.|..
T Consensus 83 ~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 158 (384)
T 1vgv_A 83 AEFK-PDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQNLLR 158 (384)
T ss_dssp HHHC-CSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhC-CCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHHHHHH
Confidence 3334 59999997533333333333345788877666432 111111 1122233332 2 389998888766665532
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHhc----CC-ceEEEeeccccc-CC
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA----GR-KVMLGVDRLDMI-KG 377 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~iIl~V~Rld~~-KG 377 (856)
.|.. ..++.++|+|+ |...+.+.. .+........++++++ ++ .+++++||+.+. ||
T Consensus 159 -----~g~~-----------~~~i~vi~n~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg 221 (384)
T 1vgv_A 159 -----ENVA-----------DSRIFITGNTVIDALLWVRDQ-VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRG 221 (384)
T ss_dssp -----TTCC-----------GGGEEECCCHHHHHHHHHHHH-TTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHH
T ss_pred -----cCCC-----------hhhEEEeCChHHHHHHhhhhc-cccchhhhHHHHHhccccCCCCCEEEEEeCCccccchH
Confidence 2321 23577899995 543332210 0000011124455432 33 477899999987 99
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
+..+++|+..+.+++|++ .|++++++ ++ .++++++++++. ...|.+ .+.++.+++..+|
T Consensus 222 ~~~li~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~-~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 222 FEEICHALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH---------VKNVIL-IDPQEYLPFVWLM 280 (384)
T ss_dssp HHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc---------CCCEEE-eCCCCHHHHHHHH
Confidence 999999999999888875 35544322 22 234455554321 013664 6788889999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-CCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~ 534 (856)
+.||+||+|| |.+++|||||+ .|+|+|.. +|..+.+ | +|++|+| |++++|++|.++|+++ +.+.+
T Consensus 281 ~~ad~~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~-~~~~~ 348 (384)
T 1vgv_A 281 NHAWLILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDE-NEYQA 348 (384)
T ss_dssp HHCSEEEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCH-HHHHH
T ss_pred HhCcEEEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhCh-HHHhh
Confidence 9999999999 44589999994 89999987 7777666 5 8999988 9999999999999854 46666
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 535 RHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 535 r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
+.++.+++...+++...++.+++.+
T Consensus 349 ~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 349 MSRAHNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp HHSSCCTTCCSCHHHHHHHHHHHTC
T ss_pred hhhccCCCcCCCHHHHHHHHHHHHH
Confidence 6666666555566666555554433
No 46
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.76 E-value=7.1e-18 Score=186.98 Aligned_cols=269 Identities=14% Similarity=0.125 Sum_probs=174.2
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHHHHHHHH
Q 003029 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 232 ~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
.|+|++|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.+..
T Consensus 96 pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----- 167 (375)
T 3beo_A 96 PDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK----- 167 (375)
T ss_dssp CSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH-----
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH-----
Confidence 5999998753333332222223467787655542 2211111 22234444433 389998888766655532
Q ss_pred hCcccCCCceeeCCeeEEEEEeecc-cChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeeccccc-CChHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMI-KGIPQKLLAFE 386 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~-KGi~~~L~Af~ 386 (856)
.|. ...++.++|+| +|...+.+..... ..+++++.+ +.+++++||+.+. ||+..+++|+.
T Consensus 168 ~g~-----------~~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~~ 230 (375)
T 3beo_A 168 ENK-----------DESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAIK 230 (375)
T ss_dssp TTC-----------CGGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHHH
T ss_pred cCC-----------CcccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHHHH
Confidence 232 12367899999 8987765321111 123344433 4467789999986 99999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~ 466 (856)
.+.+++|+++ ++ ++.. ++ ..++++++++++. ...|++ .|.++..++..+|+.||++|+|
T Consensus 231 ~l~~~~~~~~----~i-~~~g-----~~-~~~~~~~~~~~~~---------~~~v~~-~g~~~~~~~~~~~~~ad~~v~~ 289 (375)
T 3beo_A 231 RLVDKHEDVQ----VV-YPVH-----MN-PVVRETANDILGD---------YGRIHL-IEPLDVIDFHNVAARSYLMLTD 289 (375)
T ss_dssp HHHHHCTTEE----EE-EECC-----SC-HHHHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHHHTCSEEEEC
T ss_pred HHHhhCCCeE----EE-EeCC-----CC-HHHHHHHHHHhhc---------cCCEEE-eCCCCHHHHHHHHHhCcEEEEC
Confidence 9988888753 44 3321 11 1344555554321 013664 7889999999999999999999
Q ss_pred CCCcCCChhHHHHHhhcCCCCceEEEeC-CCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 467 SLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 467 S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
| |.+++|||||+ .|+|+|. ++|..+.+ ..+|++|+| |++++|++|.++++++ +.+.++.++.+++..
T Consensus 290 s-----g~~~lEA~a~G----~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~ 358 (375)
T 3beo_A 290 S-----GGVQEEAPSLG----VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDK-EAHDKMSKASNPYGD 358 (375)
T ss_dssp C-----HHHHHHHHHHT----CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHCCCCCTTCC
T ss_pred C-----CChHHHHHhcC----CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhCh-HhHhhhhhcCCCCCC
Confidence 9 67799999994 8999996 47777766 228999987 9999999999999854 466666555566555
Q ss_pred hcCHHHHHHHHHH
Q 003029 545 THTAQEWAETFVS 557 (856)
Q Consensus 545 ~~~~~~W~~~fl~ 557 (856)
.+++...++.+.+
T Consensus 359 ~~~~~~i~~~~~~ 371 (375)
T 3beo_A 359 GRASERIVEAILK 371 (375)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 5665555555443
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.76 E-value=1.9e-18 Score=195.81 Aligned_cols=240 Identities=9% Similarity=-0.037 Sum_probs=159.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH-HHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i-l~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
..|+|+.++.-...+..+.+.. +.++.+++|....- ..+...+....+ ...+..+|.|...+....+.
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------- 192 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAE-------- 192 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGG--------
T ss_pred CCCEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHH--------
Confidence 4588885443222222333433 45667778864321 111111222222 23345677777665432211
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
+.-.+ ++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.+.
T Consensus 193 ---------~~~~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~ 242 (406)
T 2hy7_A 193 ---------VVSRD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVAS 242 (406)
T ss_dssp ---------CSCST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHH
T ss_pred ---------HHhcC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHH
Confidence 11112 78899999999988754221 11244899999999999999 45556
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~ 469 (856)
+..|++ .|+++|. ++ +.+ .+.. ..|+| .|.++.+++.++|+.||+||+||..
T Consensus 243 ~~~~~~----~l~ivG~-----g~------------~~~----~~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 243 KAFPQV----TFHVIGS-----GM------------GRH----PGYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp HHCTTE----EEEEESC-----SS------------CCC----TTCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred HhCCCe----EEEEEeC-----ch------------HHh----cCCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECCCc
Confidence 667764 4887763 22 111 1111 13665 7999999999999999999999999
Q ss_pred cCCChhHHHHH-------hhcCCCCceEEEeCCCCchhhc-cCCeEE-ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 470 DGMNLVSYEFV-------ACQDLKKGVLILSEFAGAAQSL-GAGAIL-VNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 470 EG~~Lv~lEam-------a~~~~~~g~lVlSe~aG~~~~l-g~~g~l-VnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
||||++++||| ||+ .|+|+|+. .. +.+|++ |+|.|++++|++|.++++++. +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G----~PVIas~~-----v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~ 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFG----LPAVCPNA-----VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------V 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHT----CCEEEEGG-----GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------C
T ss_pred ccCchHHHHHHHHHHHHhhCC----CcEEEehh-----cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------h
Confidence 99999999999 994 89999987 22 567999 999999999999999999875 1
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSE 558 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~ 558 (856)
...+.++|...++++++.
T Consensus 356 ~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 356 RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp CCSCCCBHHHHHHHHHCG
T ss_pred hhhhcCCHHHHHHHHHHh
Confidence 334668888888777654
No 48
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=99.74 E-value=1.9e-17 Score=175.60 Aligned_cols=209 Identities=13% Similarity=0.099 Sum_probs=135.4
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEE
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i 672 (856)
||+||+||||+++ . .++++++++|++|.+ +|+.|+++|||+...+. .++ +..++|++||+.+
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~~~~~i~~nGa~i 63 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-LEPPFIVENGGGL 63 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-CCSSEEEGGGTEE
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-CCCcEEEECCcEE
Confidence 7999999999987 4 688999999999986 79999999999999998 332 2457999999999
Q ss_pred EecCCe----e-----eecccccCChHHHHHHHHHHHHHHh-c-CC-CcEEee---------------------ecceEE
Q 003029 673 RCTTGK----W-----MTTMPEHLNMEWVDSLKHVFEYFTE-R-TP-RSHFEQ---------------------RETSLV 719 (856)
Q Consensus 673 ~~~~~~----w-----~~~~~~~~~~~w~~~v~~i~~~~~~-r-t~-gs~ie~---------------------k~~si~ 719 (856)
...+.. | ..+.....+ .+.+.++++.+.+ . .. ..+... ......
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (259)
T 3zx4_A 64 YLPRDWPVRAGRPKGGYRVVSLAWP---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDET 140 (259)
T ss_dssp EEETTCSSCCSEEETTEEEEECSCC---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEE
T ss_pred EeCCCCcccccccCCceEEEEcCCC---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhcccccee
Confidence 864332 0 011111233 2333444433321 0 00 000000 000000
Q ss_pred EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCc--ceEEEEe
Q 003029 720 WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIG 797 (856)
Q Consensus 720 ~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~--d~vla~G 797 (856)
+.+ .++ ....+.+.+ .. ..+.++.+..++||.|+ ++||.|+++++++++ +++ +++++||
T Consensus 141 ~~~--~~~-----~~~~~~~~l-~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~------i~~~~~~~~~~G 201 (259)
T 3zx4_A 141 LVL--CPE-----EVEAVLEAL-EA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALWP------DPEEARFAVGLG 201 (259)
T ss_dssp BCC--CTT-----THHHHHHHH-HH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTCS------SHHHHTSEEEEE
T ss_pred EEe--CcH-----HHHHHHHHH-HH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHhC------CCCCCceEEEEe
Confidence 000 011 122334444 21 24677777677899999 999999999999999 556 8999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC---c-ccc--CCHHHHHHHHHHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF---L-HYL--RMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~---~-~~l--~~~~~~~~~l~~~~~~~~ 846 (856)
| +.||++| |+++ +++|.++|.. + |.. .+..-|+++++.++...|
T Consensus 202 D-~~nD~~m-~~~a---g~~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~~~ 251 (259)
T 3zx4_A 202 D-SLNDLPL-FRAV---DLAVYVGRGDPPEGVLATPAPGPEGFRYAVERYLLPRL 251 (259)
T ss_dssp S-SGGGHHH-HHTS---SEEEECSSSCCCTTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred C-CHHHHHH-HHhC---CCeEEeCChhhcCCcEEeCCCCchHHHHHHHHHHHhCc
Confidence 9 9999999 8876 5778887643 2 332 234568889988886544
No 49
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.71 E-value=5.4e-17 Score=161.96 Aligned_cols=142 Identities=18% Similarity=0.155 Sum_probs=113.7
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 361 ~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
.++++|+++||+.+.||+..+++|+..+ |++ .|+++|.+. ....+++.+.++ ..+. . ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~-----~~~~l~~~~~~~--~~~l--~----~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFS-----KGDHAERYARKI--MKIA--P----DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCC-----TTSTHHHHHHHH--HHHS--C----TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCc-----cHHHHHHHHHhh--hccc--C----Cc
Confidence 3678999999999999999999999886 554 477777432 112233333311 1111 0 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
|.+ .|.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|+++ |.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 664 799999999999999999999999999999999999994 899999998888887 5689999 99999999
Q ss_pred HHHHHHHcCCH
Q 003029 519 NAIARALNMSP 529 (856)
Q Consensus 519 ~ai~~aL~~~~ 529 (856)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998876
No 50
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.68 E-value=2.4e-16 Score=169.52 Aligned_cols=222 Identities=13% Similarity=0.158 Sum_probs=146.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHH-------HhhcCCCCeEEEEcCCCHhhHHHHhcccC-
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN-------ALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~-------~L~~d~g~~V~I~SGR~~~~l~~~~~~l~- 661 (856)
.+|+|+||+||||+++ . +++++..+|. +++.++|+.++++|||+...+..++..++
T Consensus 21 ~~kliifDlDGTLlds--------------~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPH--------------T--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF 84 (289)
T ss_dssp CSEEEEEETBTTTBCS--------------S--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEECCCCCcCC--------------C--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhcc
Confidence 5799999999999986 2 5566666665 34456899999999999999998887764
Q ss_pred ----ceEEeeCceEEEe---cCC-----eeeecccccCChHHHHHHHHHHHHHHhc-C----CCcEEeeecceEEEEeec
Q 003029 662 ----LWLAAENGMFLRC---TTG-----KWMTTMPEHLNMEWVDSLKHVFEYFTER-T----PRSHFEQRETSLVWNYKY 724 (856)
Q Consensus 662 ----lgliaenG~~i~~---~~~-----~w~~~~~~~~~~~w~~~v~~i~~~~~~r-t----~gs~ie~k~~si~~~y~~ 724 (856)
..+++.+|..+.. .+. .|...+... ...+.+.++++.+.++ . ..+..+.+...+.++|+.
T Consensus 85 ~~~~~~~i~~~g~~i~~~~~ng~~~~~~~~~~~~~~~---~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~ 161 (289)
T 3gyg_A 85 RYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEG---FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQE 161 (289)
T ss_dssp CBCCSEEEETTTTEEEECCSSSTTEECHHHHHHHHTT---CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEEC
T ss_pred CCCCCeEeecCCceEEEEcCCCcEeecCchhhhhccc---CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEec
Confidence 3477777776654 111 122211111 1245677777766543 1 111223344456778876
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEc---------CcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQG---------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g---------~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
.++.........+...+ ... .....+... ..++|+.+.+.+|+.++.++++++| ++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~l-~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~------~~~~~~~~ 232 (289)
T 3gyg_A 162 QDEINDKKNLLAIEKIC-EEY--GVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYN------LNTERAIA 232 (289)
T ss_dssp CCHHHHHHHHHHHHHHH-HHH--TEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccccchHHHHHHHHHH-HHc--CCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcC------CChhhEEE
Confidence 65432111112222222 110 112223332 2689999999999999999999999 67899999
Q ss_pred EecCCcccccccccccccCcceEEeCCCC-------ccccCCHHH--HHHHHHHHHHH
Q 003029 796 IGHFLGKNCNLPLQFLMQTISTVRLDSSF-------LHYLRMKMC--MRFLSQNYLMM 844 (856)
Q Consensus 796 ~GD~~~nDe~M~f~~~~~~~~~v~V~~~~-------~~~l~~~~~--~~~~l~~~~~~ 844 (856)
||| +.||++| ++.+ +++|.+++.. .|-+.++.+ +.+.|++++.-
T Consensus 233 ~GD-s~~D~~~-~~~a---g~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 233 FGD-SGNDVRM-LQTV---GNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp EEC-SGGGHHH-HTTS---SEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred EcC-CHHHHHH-HHhC---CcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 999 9999999 8876 4888888752 277777776 88888887753
No 51
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.65 E-value=9.6e-16 Score=180.18 Aligned_cols=199 Identities=13% Similarity=0.025 Sum_probs=149.3
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
.++.++|+++++....+..... .+|+++ ++.++++++||+.+ ||++.+|+||.++++++|+++ |++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEE
Confidence 5788999966543221110000 123334 34567889999999 999999999999999998754 777
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
+|. +++... ++++++.+.+.. ...|+ |.|.++.+++..+|+.|||||+||.+ |||++++|||||+
T Consensus 412 ~G~----~g~~~~----~l~~~~~~~~l~-----~~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEADA----RLRAFAHAQGVD-----AQRLV-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTHHH----HHHHHHHHTTCC-----GGGEE-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHHHH----HHHHHHHHcCCC-----hhHEE-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 762 334333 444444443211 01366 48999999999999999999999999 9999999999994
Q ss_pred CCCCceEEE-------eCCC-------CchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH---Hhc
Q 003029 484 DLKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTH 546 (856)
Q Consensus 484 ~~~~g~lVl-------Se~a-------G~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v---~~~ 546 (856)
.|+|+ |+.+ |..+.+ .+ |+++++++|.++++++ +.+.++.+++++.+ ..+
T Consensus 477 ----~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 ----CPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ----CCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTT
T ss_pred ----CCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCC
Confidence 89999 9988 888776 22 8999999999999864 47777788888888 679
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 003029 547 TAQEWAETFVSELNDTVV 564 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (856)
++...++.+++.+++...
T Consensus 544 ~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 544 HMDGFADDFGALLQALAR 561 (568)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999888877654
No 52
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.63 E-value=2.6e-15 Score=166.88 Aligned_cols=252 Identities=15% Similarity=0.128 Sum_probs=157.0
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh--hcCCEEEEeCHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l--l~aDlIgf~t~~~~~~F 302 (856)
+.+..+ .|+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.+ ..+|.+...+....+.+
T Consensus 86 ~l~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~l 161 (376)
T 1v4v_A 86 ALKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANL 161 (376)
T ss_dssp HHHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHcC-CCEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHHHH
Confidence 334444 5999999875554543333334467775 4554443222111 1222233332 24788888877665554
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEeecc-cChhhhhhhhcCCchHHHHHHHHHHhc-CCceEEEeecccccCChHH
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V~Rld~~KGi~~ 380 (856)
.. .|. ...++.++|++ +|...+.... ..++++++ ++.+++++||+...||+..
T Consensus 162 ~~-----~g~-----------~~~ki~vi~n~~~d~~~~~~~~---------~~~~~~~~~~~~vl~~~gr~~~~k~~~~ 216 (376)
T 1v4v_A 162 LK-----EGK-----------REEGILVTGQTGVDAVLLAAKL---------GRLPEGLPEGPYVTVTMHRRENWPLLSD 216 (376)
T ss_dssp HT-----TTC-----------CGGGEEECCCHHHHHHHHHHHH---------CCCCTTCCSSCEEEECCCCGGGGGGHHH
T ss_pred HH-----cCC-----------CcceEEEECCchHHHHhhhhhh---------hHHHHhcCCCCEEEEEeCcccchHHHHH
Confidence 32 122 12457788885 4543332110 01222233 3456678999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+++|++.+.+++|+++ |++++++ ++ .++++++++++. ...|++ .+.++..++..+|+.|
T Consensus 217 ll~a~~~l~~~~~~~~----lv~~~g~----~~---~~~~~l~~~~~~---------~~~v~~-~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 217 LAQALKRVAEAFPHLT----FVYPVHL----NP---VVREAVFPVLKG---------VRNFVL-LDPLEYGSMAALMRAS 275 (376)
T ss_dssp HHHHHHHHHHHCTTSE----EEEECCS----CH---HHHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHHHTE
T ss_pred HHHHHHHHHhhCCCeE----EEEECCC----CH---HHHHHHHHHhcc---------CCCEEE-ECCCCHHHHHHHHHhC
Confidence 9999999988888753 5544322 22 234455555421 014664 6788888999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-CCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
|+||.|| +|+ .+|||||+ .|+|++. .+|..+.+ +.+|++|+ .|++++|++|.++|+++ +.++++.+
T Consensus 276 d~~v~~S--~g~---~lEA~a~G----~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~-~~~~~~~~ 343 (376)
T 1v4v_A 276 LLLVTDS--GGL---QEEGAALG----VPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP-EELSRMRK 343 (376)
T ss_dssp EEEEESC--HHH---HHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH-HHHHHHHH
T ss_pred cEEEECC--cCH---HHHHHHcC----CCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh-Hhhhhhcc
Confidence 9999999 543 88999994 8888874 56666655 34688885 59999999999999854 35555443
No 53
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.60 E-value=8.4e-15 Score=161.66 Aligned_cols=250 Identities=13% Similarity=0.002 Sum_probs=161.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.....+...++. +..++|+.+..|..+|..- ...+ ...+|.+...+..
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~-~~~~~p~v~~~~~~~~~~~--------~~~~--~~~~d~v~~~~~~------------- 151 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAA-WSLGIPVVLHEQNGIAGLT--------NKWL--AKIATKVMQAFPG------------- 151 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHH-HHTTCCEEEEECSSSCCHH--------HHHH--TTTCSEEEESSTT-------------
T ss_pred CCCEEEEeCCcCchHHHHHH-HHcCCCEEEEecCCCCcHH--------HHHH--HHhCCEEEecChh-------------
Confidence 35999999754333222332 3346788888887664310 1111 1135655432211
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCc-eEEEeecccccCChHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRK-VMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
. +. ++.++|+|||.+.|.+. .. ...+ .. .+++ +++++||+.+.||++.+++|++.+
T Consensus 152 -------~--~~----~~~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l 209 (364)
T 1f0k_A 152 -------A--FP----NAEVVGNPVRTDVLALP----LP---QQRL--AGREGPVRVLVVGGSQGARILNQTMPQVAAKL 209 (364)
T ss_dssp -------S--SS----SCEECCCCCCHHHHTSC----CH---HHHH--TTCCSSEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred -------h--cC----CceEeCCccchhhcccc----hh---hhhc--ccCCCCcEEEEEcCchHhHHHHHHHHHHHHHh
Confidence 0 11 35689999998876431 11 1111 11 2445 555667999999999999999987
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+ ++.++.++++ ++ +.++ ++++.+.+. ..|.+ .|.+ +++..+|+.||++|+||
T Consensus 210 ~~-------~~~~l~i~G~----~~-~~~l----~~~~~~~~~-------~~v~~-~g~~--~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 210 GD-------SVTIWHQSGK----GS-QQSV----EQAYAEAGQ-------PQHKV-TEFI--DDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp GG-------GEEEEEECCT----TC-HHHH----HHHHHHTTC-------TTSEE-ESCC--SCHHHHHHHCSEEEECC-
T ss_pred cC-------CcEEEEEcCC----ch-HHHH----HHHHhhcCC-------CceEE-ecch--hhHHHHHHhCCEEEECC-
Confidence 43 2444334322 22 2333 334433221 13554 6777 78999999999999999
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCCch-------hhc--cCCeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~-------~~l--g~~g~lVnP~d--~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
| |++++|||||+ .|+|+|..+|.. +.+ +..|++++|.| ++++|++|.++ +++.+.++.+
T Consensus 263 --g-~~~~~EAma~G----~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~ 332 (364)
T 1f0k_A 263 --G-ALTVSEIAAAG----LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAE 332 (364)
T ss_dssp --C-HHHHHHHHHHT----CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHH
T ss_pred --c-hHHHHHHHHhC----CCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 99999999994 899999998763 233 33599999988 99999999988 4667778888
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 538 HNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
++++++..+++..-++.+++.+++..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 333 RARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred HHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 88888877877777777766665543
No 54
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.60 E-value=1.1e-14 Score=163.00 Aligned_cols=249 Identities=12% Similarity=-0.004 Sum_probs=159.3
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl 303 (856)
+++..+| |+|+++.++++. .++..... |+.+..+. +.. +. +.+. +-.+|.|.+++....+.|.
T Consensus 106 ~l~~~~p-Div~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~l~ 169 (374)
T 2xci_A 106 FEELSKP-KALIVVEREFWP--SLIIFTKV--PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEKFK 169 (374)
T ss_dssp HHHHHCC-SEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHHHH
T ss_pred HHHHhCC-CEEEEECccCcH--HHHHHHhC--CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHHHH
Confidence 3444455 899888777663 33332221 55443332 211 11 2222 3468999999988776654
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
. +| .. ++.++|+|. |..... + ++.+ .+++++++++. .||+..+|+
T Consensus 170 ~-----~g------------~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~~--~k~~~~ll~ 214 (374)
T 2xci_A 170 T-----FG------------AK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSIH--TGEVEIILK 214 (374)
T ss_dssp T-----TT------------CC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEEC--GGGHHHHHH
T ss_pred H-----cC------------CC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeCC--CchHHHHHH
Confidence 2 12 12 677888872 221110 0 0011 23677888763 589999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcccCC--CCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGRFGT--LTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~-~~l~~~l~~lv~~IN~~~g~--~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
||.++.+++|+++ |+++|. +++. .++ ++++.+.+-.+.. .+...|. +.+. .+++..+|+.|
T Consensus 215 A~~~l~~~~p~~~----lvivG~-----g~~~~~~l----~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~a 278 (374)
T 2xci_A 215 AFKEIKKTYSSLK----LILVPR-----HIENAKIF----EKKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVG 278 (374)
T ss_dssp HHHHHHTTCTTCE----EEEEES-----SGGGHHHH----HHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGE
T ss_pred HHHHHHhhCCCcE----EEEECC-----CHHHHHHH----HHHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhC
Confidence 9999988888865 777762 3432 234 4444443322100 0001344 4553 37899999999
Q ss_pred cEEEECCC-CcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 461 DVALVTSL-RDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 461 Dv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
|++++||. .|++|++++|||||+ .|+|++ +.+|+.+.+ +.+|.++.|.|++++|++|.++|++ +.|.++
T Consensus 279 Dv~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~m 352 (374)
T 2xci_A 279 KIAIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKV 352 (374)
T ss_dssp EEEEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCH
T ss_pred CEEEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHH
Confidence 99888764 577899999999994 788876 567777654 2578889999999999999999985 577788
Q ss_pred HHHHHHHHHhc
Q 003029 536 HWHNFTHVTTH 546 (856)
Q Consensus 536 ~~~~~~~v~~~ 546 (856)
+++++++++++
T Consensus 353 g~~ar~~~~~~ 363 (374)
T 2xci_A 353 EEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888887653
No 55
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.41 E-value=4.6e-12 Score=142.90 Aligned_cols=258 Identities=15% Similarity=0.154 Sum_probs=160.8
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh--hcCCEEEEeCHHHHHHHH
Q 003029 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFV 303 (856)
Q Consensus 226 ~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l--l~aDlIgf~t~~~~~~Fl 303 (856)
.+..+ +|+|++|+.-...++..+..+..++|+++ +|.+..+...+. |+..++.+-+ ..+|++...+....++|.
T Consensus 107 l~~~k-PDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l~ 182 (396)
T 3dzc_A 107 LSSEQ-PDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANLL 182 (396)
T ss_dssp HHHHC-CSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHHH
T ss_pred HHhcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHH
Confidence 33445 49999998666656655555566788764 333332222221 3445555554 357999888888777765
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeec-ccChhhhhhhhc-CCchHHHHHHHHHHhc----CCce-EEEeeccc-cc
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALE-INPVQVHIKELQETFA----GRKV-MLGVDRLD-MI 375 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~-GID~~~f~~~~~-~~~~~~~~~~lr~~~~----~~~i-Il~V~Rld-~~ 375 (856)
+ .|.. ..+|.++++ ++|...+.+... .. .....+++++++ ++++ ++..+|.. ..
T Consensus 183 ~-----~G~~-----------~~ki~vvGn~~~d~~~~~~~~~~~~--~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~ 244 (396)
T 3dzc_A 183 Q-----ENYN-----------AENIFVTGNTVIDALLAVREKIHTD--MDLQATLESQFPMLDASKKLILVTGHRRESFG 244 (396)
T ss_dssp H-----TTCC-----------GGGEEECCCHHHHHHHHHHHHHHHC--HHHHHHHHHTCTTCCTTSEEEEEECSCBCCCT
T ss_pred H-----cCCC-----------cCcEEEECCcHHHHHHHhhhhcccc--hhhHHHHHHHhCccCCCCCEEEEEECCcccch
Confidence 3 2332 235667765 566443322100 00 011245666653 3454 44566755 34
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHH
Q 003029 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (856)
Q Consensus 376 KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~a 455 (856)
|++..+++|+..+.+++|+++ ++..+.+ .+. +++.++++. +. ...|++ .+++++.++..
T Consensus 245 ~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~~---~~~~l~~~~---~~------~~~v~~-~~~lg~~~~~~ 303 (396)
T 3dzc_A 245 GGFERICQALITTAEQHPECQ----ILYPVHL----NPN---VREPVNKLL---KG------VSNIVL-IEPQQYLPFVY 303 (396)
T ss_dssp THHHHHHHHHHHHHHHCTTEE----EEEECCB----CHH---HHHHHHHHT---TT------CTTEEE-ECCCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCce----EEEEeCC----ChH---HHHHHHHHH---cC------CCCEEE-eCCCCHHHHHH
Confidence 889999999999999888753 5544322 132 344444432 11 124664 67889899999
Q ss_pred HHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhcc-CCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 456 ly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~lg-~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
+|+.||++|.+| | |++ +||++|+ .|+|++ +.++..+.+. ..+++|++ |+++++++|.++|+++ +.+.
T Consensus 304 l~~~ad~vv~~S---G-g~~-~EA~a~G----~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~-~~~~ 372 (396)
T 3dzc_A 304 LMDRAHIILTDS---G-GIQ-EEAPSLG----KPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDP-QAYQ 372 (396)
T ss_dssp HHHHCSEEEESC---S-GGG-TTGGGGT----CCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCH-HHHH
T ss_pred HHHhcCEEEECC---c-cHH-HHHHHcC----CCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999 6 665 9999994 889988 5666555552 24677755 8999999999999864 3444
Q ss_pred HHHH
Q 003029 534 KRHW 537 (856)
Q Consensus 534 ~r~~ 537 (856)
++.+
T Consensus 373 ~m~~ 376 (396)
T 3dzc_A 373 AMSQ 376 (396)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 4433
No 56
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.33 E-value=2.4e-11 Score=137.32 Aligned_cols=253 Identities=15% Similarity=0.146 Sum_probs=156.6
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHH
Q 003029 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFV 303 (856)
Q Consensus 226 ~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl 303 (856)
.+..+ +|+|++|+.-...++..+..+..++|+++ ++.+..+...++ |+.+++.+.++ .+|++...+..+.++|.
T Consensus 110 l~~~k-PD~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l~ 185 (403)
T 3ot5_A 110 IAAEN-PDIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENLL 185 (403)
T ss_dssp HHHHC-CSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred HHHcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHH
Confidence 34445 49999998655555544444455788753 333332222222 33345555433 37888888888887776
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeec-ccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccc-cCChHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDM-IKGIPQ 380 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~-~KGi~~ 380 (856)
+ .|.. ..+|.++++ ++|...+........ .+++++.+ +.+++.++|... .|++..
T Consensus 186 ~-----~Gi~-----------~~~i~vvGn~~~D~~~~~~~~~~~~------~~~~~l~~~~~vlv~~~r~~~~~~~l~~ 243 (403)
T 3ot5_A 186 A-----EGKD-----------PATIFVTGNTAIDALKTTVQKDYHH------PILENLGDNRLILMTAHRRENLGEPMQG 243 (403)
T ss_dssp H-----TTCC-----------GGGEEECCCHHHHHHHHHSCTTCCC------HHHHSCTTCEEEEECCCCHHHHTTHHHH
T ss_pred H-----cCCC-----------cccEEEeCCchHHHHHhhhhhhcch------HHHHhccCCCEEEEEeCcccccCcHHHH
Confidence 4 2331 235666765 567654432110000 12222333 345667888754 478999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+++|+..+.+++|+++ ++.++.| .+ .+++.+++..+ . +..|+ +.++++..++..+|+.|
T Consensus 244 ll~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~~---~------~~~v~-l~~~l~~~~~~~l~~~a 302 (403)
T 3ot5_A 244 MFEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAILG---G------HERIH-LIEPLDAIDFHNFLRKS 302 (403)
T ss_dssp HHHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHHT---T------CTTEE-EECCCCHHHHHHHHHHE
T ss_pred HHHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHhC---C------CCCEE-EeCCCCHHHHHHHHHhc
Confidence 9999999999998753 5544332 12 23344444321 1 12465 47888999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
|++|.+| |-+.+||++|+ .|+|++ ..++..+.+ ..++++|.+ |+++++++|.++|+++ +.+.++.
T Consensus 303 d~vv~~S-----Gg~~~EA~a~g----~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~ 369 (403)
T 3ot5_A 303 YLVFTDS-----GGVQEEAPGMG----VPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMA 369 (403)
T ss_dssp EEEEECC-----HHHHHHGGGTT----CCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHH
T ss_pred CEEEECC-----ccHHHHHHHhC----CCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHH
Confidence 9999888 33449999994 888888 555555555 236888876 9999999999999864 3444443
No 57
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.09 E-value=7.5e-11 Score=124.72 Aligned_cols=187 Identities=8% Similarity=0.070 Sum_probs=105.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++. ..++++++++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 5 ~~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~ 68 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPATE 68 (266)
T ss_dssp CCSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH
Confidence 4899999999999975 2356789999999997 7999999988 777888787777654
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
++++.||+.+.. ......... .... ..+.+.++.+ |..+........+........+ ....+...
T Consensus 69 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 136 (266)
T 3pdw_A 69 EQVFTTSMATAQHIAQQKKDASVY-VIGE----EGIRQAIEEN-----GLTFGGENADFVVVGIDRSITY--EKFAVGCL 136 (266)
T ss_dssp GGEEEHHHHHHHHHHHHCTTCEEE-EESC----HHHHHHHHHT-----TCEECCTTCSEEEECCCTTCCH--HHHHHHHH
T ss_pred HHccCHHHHHHHHHHhhCCCCEEE-EEeC----hhHHHHHHHc-----CCccCCCCCCEEEEeCCCCCCH--HHHHHHHH
Confidence 356666654421 000000011 0001 2233333322 1111111111111111111111 11112222
Q ss_pred HHhcC---CCCCCCeEE------EEc----------CcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 740 HLWTG---PISNASVEV------VQG----------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 740 ~L~~~---~~~~~~v~v------~~g----------~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
.+... +..+..... ..+ ....|+...+..|+.+++.+++++| ++++++++||| +
T Consensus 137 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~ 209 (266)
T 3pdw_A 137 AIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLG------TDVSETLMVGD-N 209 (266)
T ss_dssp HHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHT------CCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcC------CChhhEEEECC-C
Confidence 22111 001111100 111 0135677889999999999999999 67899999999 9
Q ss_pred -cccccccccccc
Q 003029 801 -GKNCNLPLQFLM 812 (856)
Q Consensus 801 -~nDe~M~f~~~~ 812 (856)
.||++| ++.++
T Consensus 210 ~~~Di~~-~~~aG 221 (266)
T 3pdw_A 210 YATDIMA-GINAG 221 (266)
T ss_dssp TTTHHHH-HHHHT
T ss_pred cHHHHHH-HHHCC
Confidence 799999 88775
No 58
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.05 E-value=1.9e-10 Score=121.70 Aligned_cols=208 Identities=11% Similarity=0.068 Sum_probs=120.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc---
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL--- 662 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l--- 662 (856)
.+.+.|+||+||||++. ..+++.++++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 15 ~~~~~v~~DlDGTLl~~---------------~~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~ 78 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLD---------------DSLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 78 (271)
T ss_dssp GGCCEEEECCBTTTEET---------------TEECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred cCCCEEEEcCcCcEEeC---------------CEECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 45789999999999986 2366889999999986 799999999 9999999998888753
Q ss_pred --eEEeeCceEEEec-----CCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHH
Q 003029 663 --WLAAENGMFLRCT-----TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (856)
Q Consensus 663 --gliaenG~~i~~~-----~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~ 735 (856)
.++++||+.+... +...... .. ..+.+.++.+ |..+........+........+ ....
T Consensus 79 ~~~ii~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~ 143 (271)
T 1vjr_A 79 DDAVVTSGEITAEHMLKRFGRCRIFLL----GT----PQLKKVFEAY-----GHVIDEENPDFVVLGFDKTLTY--ERLK 143 (271)
T ss_dssp GGGEEEHHHHHHHHHHHHHCSCEEEEE----SC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHH
T ss_pred hhhEEcHHHHHHHHHHHhCCCCeEEEE----cC----HHHHHHHHHc-----CCccCCCCCCEEEEeCCCCcCH--HHHH
Confidence 3677777654310 1111000 01 1222222221 1111110011111111111111 1122
Q ss_pred HHHHHHhcCC----CCCCCeEE------EEc----------CcEEEE-EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEE
Q 003029 736 DMLQHLWTGP----ISNASVEV------VQG----------SKSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (856)
Q Consensus 736 el~~~L~~~~----~~~~~v~v------~~g----------~~~vEV-~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vl 794 (856)
+.+..+ ..- +.+..... ... ....|. .+.+.+|+.+++.+++++| +++++++
T Consensus 144 ~~l~~l-~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~~e~i 216 (271)
T 1vjr_A 144 KACILL-RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG------VPKERMA 216 (271)
T ss_dssp HHHHHH-TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT------CCGGGEE
T ss_pred HHHHHH-HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhC------CCCceEE
Confidence 333333 210 01110000 000 012355 7889999999999999999 6789999
Q ss_pred EEecCC-cccccccccccccCcceEEeCCC-------------CccccCCHHHHHHHH
Q 003029 795 CIGHFL-GKNCNLPLQFLMQTISTVRLDSS-------------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 795 a~GD~~-~nDe~M~f~~~~~~~~~v~V~~~-------------~~~~l~~~~~~~~~l 838 (856)
+||| + .||++| .+.++- .+|.|... +.|.+.+..++.++|
T Consensus 217 ~iGD-~~~nDi~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 217 MVGD-RLYTDVKL-GKNAGI--VSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp EEES-CHHHHHHH-HHHHTC--EEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred EECC-CcHHHHHH-HHHcCC--eEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999 9 599999 887743 24555321 226677777776654
No 59
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.04 E-value=1.2e-10 Score=123.27 Aligned_cols=212 Identities=12% Similarity=0.083 Sum_probs=116.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++.. .+.++++++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 7 ~~kli~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~ 70 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKSV---------------TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLEVGE 70 (268)
T ss_dssp CCSEEEEECBTTTEETT---------------EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEcCcCcEECCC---------------EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH
Confidence 58999999999999862 256789999999986 7999999999 788888888877654
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEE-eeecceEEEEeecCChhhhHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDML 738 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-e~k~~si~~~y~~~d~e~~~~qa~el~ 738 (856)
.+++.||+.... ......... .... ..+...+... |..+ ........+.-......+. ...+..
T Consensus 71 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~l~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 138 (268)
T 3qgm_A 71 DEILVATYATARFIAREKPNAKVF-TTGE----EGLIEELRLA-----GLEIVDYDEAEYLVVGSNRKINFE--LMTKAL 138 (268)
T ss_dssp GGEEEHHHHHHHHHHHHSTTCEEE-ECCC----HHHHHHHHHT-----TCEECCTTTCSEEEECCCTTCBHH--HHHHHH
T ss_pred HHeeCHHHHHHHHHHhhCCCCeEE-EEcC----HHHHHHHHHc-----CCeecCCCCCCEEEEecCCCCCHH--HHHHHH
Confidence 477777764321 000000000 0001 1222222221 1111 1111111111000011111 011111
Q ss_pred HHHhcC---CCCCCCeEE------EEcC----------cEEEE-EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 739 QHLWTG---PISNASVEV------VQGS----------KSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 739 ~~L~~~---~~~~~~v~v------~~g~----------~~vEV-~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
..+... +..+..... ..+. ...|+ ...+-.|+.+++.+++++| ++++++++|||
T Consensus 139 ~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~------~~~~~~~~vGD 212 (268)
T 3qgm_A 139 RACLRGIRYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILG------LDAKDVAVVGD 212 (268)
T ss_dssp HHHHHTCEEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHT------CCGGGEEEEES
T ss_pred HHHhCCCcEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhC------CCchhEEEECC
Confidence 222011 111111110 1111 12355 6778899999999999999 67899999999
Q ss_pred CC-cccccccccccccCcceEEeC--CC---------------CccccCCHHHHHHHHH
Q 003029 799 FL-GKNCNLPLQFLMQTISTVRLD--SS---------------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 799 ~~-~nDe~M~f~~~~~~~~~v~V~--~~---------------~~~~l~~~~~~~~~l~ 839 (856)
+ .||++| .+.++-. +|.|. +. +.|.+.+..++.++|+
T Consensus 213 -~~~~Di~~-~~~~g~~--~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 213 -QIDVDVAA-GKAIGAE--TVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp -CTTTHHHH-HHHHTCE--EEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred -CchHHHHH-HHHCCCc--EEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 9 699999 7776533 45553 21 1266777777766553
No 60
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.04 E-value=5.2e-11 Score=124.90 Aligned_cols=209 Identities=12% Similarity=0.039 Sum_probs=114.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (856)
.+|+|+||+||||+++.. ....+++.+.++++.|.+ .|+.++++| ||+...+.+.+..+++
T Consensus 11 ~~k~i~fDlDGTLl~s~~-----------~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~ 78 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGA-----------GGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQRLGFDISE 78 (271)
T ss_dssp TCCEEEECCBTTTEECCT-----------TTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCCCeEEecCC-----------CCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHHCCCCCCH
Confidence 479999999999998520 012366788999999986 799999999 9999988888877543
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
.+++.+|+.+.. ....+..... .+.+.++++..... ...+.+ +...+..+......+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~l~ 141 (271)
T 2x4d_A 79 QEVTAPAPAACQILKERGLRPYLLI-------HDGVRSEFDQIDTS---------NPNCVV-IADAGESFSYQNMNNAFQ 141 (271)
T ss_dssp GGEECHHHHHHHHHHHHTCCEEEEC-------CGGGGGGGTTSCCS---------SCSEEE-ECCCGGGCCHHHHHHHHH
T ss_pred HHeecHHHHHHHHHHHcCCEEEEEe-------CHHHHHHHHHcCCC---------CCCEEE-EecCCCCcCHHHHHHHHH
Confidence 355555543211 0000000000 00011111111000 000000 000000000001111222
Q ss_pred HHhcCCCCCCCeEEEE------------------------cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 740 HLWTGPISNASVEVVQ------------------------GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 740 ~L~~~~~~~~~v~v~~------------------------g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
.+.... ...+ +.. +....|+.+.+.+|+.+++.+++++| ++++++++
T Consensus 142 ~l~~~~--~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~ 212 (271)
T 2x4d_A 142 VLMELE--KPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIG------VEAHQAVM 212 (271)
T ss_dssp HHHHCS--SCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHT------CCGGGEEE
T ss_pred HHHhcC--CCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhC------CCcceEEE
Confidence 221100 0001 000 01123667788899999999999999 67899999
Q ss_pred EecCCc-ccccccccccccCcceEEeCCC-------------CccccCCHHHHHHHHHH
Q 003029 796 IGHFLG-KNCNLPLQFLMQTISTVRLDSS-------------FLHYLRMKMCMRFLSQN 840 (856)
Q Consensus 796 ~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-------------~~~~l~~~~~~~~~l~~ 840 (856)
||| +. ||++| ++.++-. ++.|... +.+.+.+..++..+|.+
T Consensus 213 iGD-~~~nDi~~-a~~aG~~--~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 213 IGD-DIVGDVGG-AQRCGMR--ALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp EES-CTTTTHHH-HHHTTCE--EEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred ECC-CcHHHHHH-HHHCCCc--EEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 999 98 99999 8877532 3344221 12677888888776654
No 61
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.98 E-value=2.4e-08 Score=110.07 Aligned_cols=244 Identities=13% Similarity=0.040 Sum_probs=151.6
Q ss_pred HHHHhcCCCCEEEEeCccch--hH-HHHHHhc-CCCCeEEEEEecCCCchhhhhcCcccHHH-HHHhhcCCEEEEeCHHH
Q 003029 224 VVNKHYKDGDVVWCHDYHLM--FL-PKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDY 298 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl~--ll-p~~lr~~-~~~~~i~~flH~PfP~~e~fr~lp~~~~i-l~~ll~aDlIgf~t~~~ 298 (856)
.+....+++|+|+++-..+. .+ ..+++.. ..++++.+.+|--||-.- ..-+..... ...+-.||.|..+++..
T Consensus 67 ~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 67 GIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 35556788999999876642 22 2333332 238999999998765221 000011111 22355799999999876
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCC
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KG 377 (856)
.+.+.+ .|.. ..++. +.++ |.. .+ .+. ....++++|+++||+....+
T Consensus 145 ~~~l~~-----~G~~-----------~~ki~--~~~~~~~~--~~---~~~---------~~~~~~~~i~yaG~l~k~~~ 192 (339)
T 3rhz_A 145 IDKLRD-----FGMN-----------VSKTV--VQGMWDHP--TQ---APM---------FPAGLKREIHFPGNPERFSF 192 (339)
T ss_dssp HHHHHH-----TTCC-----------CSEEE--ECCSCCCC--CC---CCC---------CCCEEEEEEEECSCTTTCGG
T ss_pred HHHHHH-----cCCC-----------cCcee--ecCCCCcc--Cc---ccc---------cccCCCcEEEEeCCcchhhH
Confidence 655542 1321 12443 3333 211 00 000 01134678999999985322
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
+.. + .|++ .|+++|.+. +. + .. .|+| .|.++.++++.+|
T Consensus 193 L~~-------l---~~~~----~f~ivG~G~-----~~------------~-------l~--nV~f-~G~~~~~el~~~l 231 (339)
T 3rhz_A 193 VKE-------W---KYDI----PLKVYTWQN-----VE------------L-------PQ--NVHK-INYRPDEQLLMEM 231 (339)
T ss_dssp GGG-------C---CCSS----CEEEEESCC-----CC------------C-------CT--TEEE-EECCCHHHHHHHH
T ss_pred HHh-------C---CCCC----eEEEEeCCc-----cc------------C-------cC--CEEE-eCCCCHHHHHHHH
Confidence 211 1 3554 488887532 10 0 01 3775 7999999999999
Q ss_pred HHccEEEECCCCcC---------CChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 458 AVTDVALVTSLRDG---------MNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 458 ~~ADv~v~~S~~EG---------~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
+.||+.++. .++ ++..+.|||||+ .|+|++..++.++.+ +..|+.++ +.++++++|..+
T Consensus 232 ~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l-- 301 (339)
T 3rhz_A 232 SQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV-- 301 (339)
T ss_dssp HTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC--
T ss_pred HhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh--
Confidence 999999987 233 477899999994 899999999988888 45689887 578888888764
Q ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 527 MSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 527 ~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
.++++.++.+++++..+......-.+
T Consensus 302 -~~~~~~~m~~na~~~a~~~~~~~f~k 327 (339)
T 3rhz_A 302 -NEDEYIELVKNVRSFNPILRKGFFTR 327 (339)
T ss_dssp -CHHHHHHHHHHHHHHTHHHHTTHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 46678777777777655543333333
No 62
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=98.95 E-value=1.4e-09 Score=115.15 Aligned_cols=195 Identities=8% Similarity=0.051 Sum_probs=109.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++. +..+ +.++++|++|.+ .|+.|+++| ||+...+.+.+..+++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG--------------KSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp CCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred CCCEEEEeCCCceEeC--------------CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 5799999999999987 3456 799999999986 799999999 8999999888887754
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
.+++.||+.+.. ......... .... +.+.+.++.+ |..+........+........+ ....+...
T Consensus 68 ~~ii~~~~~~~~~l~~~~~~~~~~-~~~~----~~l~~~l~~~-----g~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~ 135 (264)
T 3epr_A 68 ETIYTATMATVDYMNDMNRGKTAY-VIGE----EGLKKAIADA-----GYVEDTKNPAYVVVGLDWNVTY--DKLATATL 135 (264)
T ss_dssp GGEEEHHHHHHHHHHHHTCCSEEE-EESC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHHHHHH
T ss_pred hheecHHHHHHHHHHHhCCCCeEE-EECC----HHHHHHHHHc-----CCcccCCcCCEEEEeCCCCCCH--HHHHHHHH
Confidence 367777765431 100111111 0011 2233333322 2112111111111111111111 11112222
Q ss_pred HHhcC---CCCCCCeEEEEcC----------------cEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 740 HLWTG---PISNASVEVVQGS----------------KSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 740 ~L~~~---~~~~~~v~v~~g~----------------~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
.+... +..+......... ...|....+-.|+.+++.++++++ ++++++++||| +
T Consensus 136 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~ 208 (264)
T 3epr_A 136 AIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILN------IPRNQAVMVGD-N 208 (264)
T ss_dssp HHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHT------SCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhC------cCcccEEEECC-C
Confidence 22111 0111111100000 013445566778888999999999 67899999999 9
Q ss_pred -cccccccccccccCcceEEeCC
Q 003029 801 -GKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 801 -~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
.||++| .+.++- -+|.|..
T Consensus 209 ~~~Di~~-a~~aG~--~~~~v~~ 228 (264)
T 3epr_A 209 YLTDIMA-GINNDI--DTLLVTT 228 (264)
T ss_dssp TTTHHHH-HHHHTC--EEEEETT
T ss_pred cHHHHHH-HHHCCC--eEEEECC
Confidence 799999 776642 3666643
No 63
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.95 E-value=4.3e-09 Score=104.96 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=100.6
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
..+|+|+||+||||++....- ....+....++++..++|++|.+ .|+.++|+|||+...+...+..+++.-.. +
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~-~ 79 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHY----DANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFF-L 79 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEE-E
T ss_pred hCCeEEEEeCCCCcCCCCeee----ccCcceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHHcCCceee-c
Confidence 357999999999999862100 00000122467789999999986 69999999999999988888776542110 0
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
|
T Consensus 80 ~------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 80 G------------------------------------------------------------------------------- 80 (180)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---- 824 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---- 824 (856)
..+|+.+++.++++++ ++++.+++||| +.||.+| ++.+ ++++.+++..
T Consensus 81 -----------------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-~~~a---g~~~~~~~~~~~~~ 132 (180)
T 1k1e_A 81 -----------------KLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPA-FAAC---GTSFAVADAPIYVK 132 (180)
T ss_dssp -----------------CSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHH
T ss_pred -----------------CCCcHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHc---CCeEEeCCccHHHH
Confidence 0579999999999998 66899999999 9999999 6655 6677776531
Q ss_pred --c-cccCCHH---HHHHHHHHHHH
Q 003029 825 --L-HYLRMKM---CMRFLSQNYLM 843 (856)
Q Consensus 825 --~-~~l~~~~---~~~~~l~~~~~ 843 (856)
+ |-+.++. .++.+++.++.
T Consensus 133 ~~ad~v~~~~~~~g~~~~~~~~~l~ 157 (180)
T 1k1e_A 133 NAVDHVLSTHGGKGAFREMSDMILQ 157 (180)
T ss_dssp TTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred hhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2 6666542 23366666654
No 64
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=98.88 E-value=3.7e-10 Score=116.38 Aligned_cols=46 Identities=11% Similarity=-0.065 Sum_probs=41.2
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccc
Q 003029 759 SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLM 812 (856)
Q Consensus 759 ~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~ 812 (856)
..|+.+.+.+|+.+++++++++| ++++++++||| + .||++| ++.++
T Consensus 168 ~~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~nDi~~-~~~aG 214 (250)
T 2c4n_A 168 GRKPFYVGKPSPWIIRAALNKMQ------AHSEETVIVGD-NLRTDILA-GFQAG 214 (250)
T ss_dssp CCCCEECSTTSTHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHH-HHHTT
T ss_pred CCCceEeCCCCHHHHHHHHHHcC------CCcceEEEECC-CchhHHHH-HHHcC
Confidence 35778899999999999999999 67899999999 9 799999 88774
No 65
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.82 E-value=1.7e-11 Score=134.80 Aligned_cols=210 Identities=8% Similarity=-0.020 Sum_probs=115.1
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH---hhHH---HHh-
Q 003029 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLD---KNF- 657 (856)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~---~~~- 657 (856)
.+.....|+|+||+||||++.. . .++|.++.. .|+.|+++|||+. ..+. .++
T Consensus 15 ~~~~~~~kli~fDlDGTLld~~--------------~------~~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~ 73 (332)
T 1y8a_A 15 ENLYFQGHMFFTDWEGPWILTD--------------F------ALELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEA 73 (332)
T ss_dssp -----CCCEEEECSBTTTBCCC--------------H------HHHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCT
T ss_pred hhhCCCceEEEEECcCCCcCcc--------------H------HHHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeec
Confidence 3444567999999999999862 1 167777775 5789999999998 6665 555
Q ss_pred -cccC--ceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEE-eeec----------ceE--EEE
Q 003029 658 -QEYN--LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRE----------TSL--VWN 721 (856)
Q Consensus 658 -~~l~--lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-e~k~----------~si--~~~ 721 (856)
..++ ..+++.||+++...++.+.... . .++.+.++++...+ .-...+ ..+. ..+ .+.
T Consensus 74 ~~~l~~~~~~i~~nGa~i~~~~~~~~~~~---~---~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~ 146 (332)
T 1y8a_A 74 GYTLKLLTPFLAAAGVKNRDVERIAELSA---K---FVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH 146 (332)
T ss_dssp TTHHHHHHHHHHHTTCCHHHHHHHHHHHC---C---BCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE
T ss_pred hhhcCCcCeEEEcCCcEEEECCeEeeccC---C---CHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc
Confidence 4443 3578899998763211111100 1 13445555555543 111111 1110 000 000
Q ss_pred eecCChh-------hhH-------HHH-----HHHHHHHhcCCCCCCCeEEEEc--CcEEE--EEeCCCCHHHHHHHHHH
Q 003029 722 YKYADVE-------FGR-------IQA-----RDMLQHLWTGPISNASVEVVQG--SKSVE--VRAVGVTKGAAIDRILA 778 (856)
Q Consensus 722 y~~~d~e-------~~~-------~qa-----~el~~~L~~~~~~~~~v~v~~g--~~~vE--V~p~gvnKG~av~~ll~ 778 (856)
....+.+ ... ... +++ +.+ .+ + +... ..++| +.+++++||.|++.+
T Consensus 147 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l-~~~-~~------~-~~~s~~~~~~e~ii~~~g~~K~~al~gi-- 215 (332)
T 1y8a_A 147 GTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF-RKL-DE------L-FSRSEVRKIVESVKAVGAGEKAKIMRGY-- 215 (332)
T ss_dssp EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH-HHH-HH------H-HHSHHHHHHHHTCBCCCHHHHHHHHHHH--
T ss_pred ccccchhhhccccccceeEEecCHHHHhhhhHHHH-HHH-HH------H-HhhcCCCceeeEEecCCCCCHHHHHhcc--
Confidence 0000000 000 000 111 222 10 1 2212 12344 889999999999832
Q ss_pred HhCcCCcCCCCcce----EEEEecCCccccccccccccc-CcceEEeCCC------Cc-cccCC--HHHHHHHHHHHHHH
Q 003029 779 EIVHSKKMKTAIDY----VLCIGHFLGKNCNLPLQFLMQ-TISTVRLDSS------FL-HYLRM--KMCMRFLSQNYLMM 844 (856)
Q Consensus 779 ~l~~~~~~~~~~d~----vla~GD~~~nDe~M~f~~~~~-~~~~v~V~~~------~~-~~l~~--~~~~~~~l~~~~~~ 844 (856)
+++. |++||| +.||++| |+.+.. .+++|.| +. .+ |-+.+ ...|.++|+.++..
T Consensus 216 ----------~~~~~~~~via~GD-s~NDi~m-l~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~ 282 (332)
T 1y8a_A 216 ----------CESKGIDFPVVVGD-SISDYKM-FEAARGLGGVAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFMER 282 (332)
T ss_dssp ----------HHHHTCSSCEEEEC-SGGGHHH-HHHHHHTTCEEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHH
T ss_pred ----------ChhhcCceEEEEeC-cHhHHHH-HHHHhhcCCeEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHc
Confidence 2456 999999 9999999 998721 2456777 53 23 66655 66788999988754
Q ss_pred HH
Q 003029 845 AR 846 (856)
Q Consensus 845 ~~ 846 (856)
-|
T Consensus 283 ~~ 284 (332)
T 1y8a_A 283 KE 284 (332)
T ss_dssp GG
T ss_pred CC
Confidence 44
No 66
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.77 E-value=4.3e-07 Score=101.81 Aligned_cols=244 Identities=10% Similarity=0.061 Sum_probs=142.9
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHF 302 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~F 302 (856)
+.+..+ +|+|.+|+.-...++ .+.....++|+++ ++.+..+.+ + +..+++.+-+. .+|++...+....++|
T Consensus 89 ~l~~~k-PD~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~~l 161 (385)
T 4hwg_A 89 VLEKEK-PDAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARRYL 161 (385)
T ss_dssp HHHHHC-CSEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHhcC-CcEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHHHH
Confidence 334445 499999985444444 3444445788754 343332211 1 22234444432 4788877888777777
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEeec-ccChhhhhhhhcCCchHHHHHHHHHHhc---CCceEEEeeccc---cc
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLD---MI 375 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~V~Rld---~~ 375 (856)
.+ .|.. ..+|.++++ ++|.-.+.... .....++++++ ++.+++..+|.. ..
T Consensus 162 ~~-----~G~~-----------~~~I~vtGnp~~D~~~~~~~~------~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~ 219 (385)
T 4hwg_A 162 IA-----EGLP-----------AELTFKSGSHMPEVLDRFMPK------ILKSDILDKLSLTPKQYFLISSHREENVDVK 219 (385)
T ss_dssp HH-----TTCC-----------GGGEEECCCSHHHHHHHHHHH------HHHCCHHHHTTCCTTSEEEEEECCC-----C
T ss_pred HH-----cCCC-----------cCcEEEECCchHHHHHHhhhh------cchhHHHHHcCCCcCCEEEEEeCCchhcCcH
Confidence 54 2332 234555554 56643332100 01123455553 344566677854 44
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh-hcccCCCCcccEEEeCCCCCHHHHH
Q 003029 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI-NGRFGTLTAVPIHHLDRSLDFPALC 454 (856)
Q Consensus 376 KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~I-N~~~g~~~~~pV~~~~g~v~~~el~ 454 (856)
|++..+++|+..+.+++ ++ .+|... .|. +++.++ +. +. .+ ....|+ +.+.++..++.
T Consensus 220 ~~l~~ll~al~~l~~~~-~~----~vv~p~------~p~---~~~~l~----~~~~~-~~--~~~~v~-l~~~lg~~~~~ 277 (385)
T 4hwg_A 220 NNLKELLNSLQMLIKEY-NF----LIIFST------HPR---TKKRLE----DLEGF-KE--LGDKIR-FLPAFSFTDYV 277 (385)
T ss_dssp HHHHHHHHHHHHHHHHH-CC----EEEEEE------CHH---HHHHHH----TSGGG-GG--TGGGEE-ECCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-Ce----EEEEEC------ChH---HHHHHH----HHHHH-hc--CCCCEE-EEcCCCHHHHH
Confidence 78999999999987765 43 233322 132 233332 22 10 00 112465 47888999999
Q ss_pred HHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-chhhc-cCCeEEECCCCHHHHHHHHHHHHcCCH
Q 003029 455 ALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 455 aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
.+|+.||+++..| |.+..||++++ .|+|+....+ -.+.+ ..++++|.+ |.+++++++.++|+++.
T Consensus 278 ~l~~~adlvvt~S-----Ggv~~EA~alG----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 278 KLQMNAFCILSDS-----GTITEEASILN----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHHHCSEEEECC-----TTHHHHHHHTT----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTCB
T ss_pred HHHHhCcEEEECC-----ccHHHHHHHcC----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhChH
Confidence 9999999999887 45679999994 7777765433 33444 225677754 99999999999998753
No 67
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.76 E-value=2.7e-08 Score=96.91 Aligned_cols=142 Identities=14% Similarity=0.050 Sum_probs=99.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
...|+|+||+||||++..... .........+++.+.++|++|.+ .|+.++|+||++...+...+..+++.-.
T Consensus 7 ~~~k~v~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~--- 78 (162)
T 2p9j_A 7 KKLKLLIMDIDGVLTDGKLYY----TEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKELGVEEI--- 78 (162)
T ss_dssp HHCCEEEECCTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHTTCCEE---
T ss_pred cceeEEEEecCcceECCceee----cCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCHhh---
Confidence 347999999999999752100 00001123456788999999986 6999999999999888888877653210
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
+ +
T Consensus 79 --------------~----~------------------------------------------------------------ 80 (162)
T 2p9j_A 79 --------------Y----T------------------------------------------------------------ 80 (162)
T ss_dssp --------------E----E------------------------------------------------------------
T ss_pred --------------c----c------------------------------------------------------------
Confidence 0 0
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----- 823 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----- 823 (856)
.+..|..++++++++++ ++++.+++||| +.+|..| .+.+ ++.+.+.+.
T Consensus 81 ----------------~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~a---g~~~~~~~~~~~~~ 133 (162)
T 2p9j_A 81 ----------------GSYKKLEIYEKIKEKYS------LKDEEIGFIGD-DVVDIEV-MKKV---GFPVAVRNAVEEVR 133 (162)
T ss_dssp ----------------CC--CHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEEecCccHHHH
Confidence 03468899999999998 56899999999 9999999 6544 566666543
Q ss_pred --CccccCCHHH---HHHHHHHHHH
Q 003029 824 --FLHYLRMKMC---MRFLSQNYLM 843 (856)
Q Consensus 824 --~~~~l~~~~~---~~~~l~~~~~ 843 (856)
+.|.+.+..+ ++.+++.++.
T Consensus 134 ~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 134 KVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred hhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2276777655 6677777764
No 68
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.67 E-value=1.1e-07 Score=95.46 Aligned_cols=147 Identities=13% Similarity=0.112 Sum_probs=100.1
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEE
Q 003029 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (856)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgli 665 (856)
++....|+|+||+||||++....- ....+...........+|++|.+ .|+.++|+||++...++..+..+++.-.
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~----~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~lgl~~~ 95 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYM----GNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATLGITHL 95 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEE----ETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHHTCCEE
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEe----cCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHcCCcee
Confidence 345678999999999999742100 00000011122333457888885 6999999999999888877776653211
Q ss_pred eeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCC
Q 003029 666 AENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP 745 (856)
Q Consensus 666 aenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~ 745 (856)
+
T Consensus 96 -----------------~-------------------------------------------------------------- 96 (188)
T 2r8e_A 96 -----------------Y-------------------------------------------------------------- 96 (188)
T ss_dssp -----------------E--------------------------------------------------------------
T ss_pred -----------------e--------------------------------------------------------------
Confidence 0
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC-
Q 003029 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF- 824 (856)
Q Consensus 746 ~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~- 824 (856)
+.+..|+.++++++++++ ++++++++||| +.||++| ++.+ ++++.+++..
T Consensus 97 ------------------~~~kpk~~~~~~~~~~~g------~~~~~~~~iGD-~~~Di~~-a~~a---g~~~~~~~~~~ 147 (188)
T 2r8e_A 97 ------------------QGQSNKLIAFSDLLEKLA------IAPENVAYVGD-DLIDWPV-MEKV---GLSVAVADAHP 147 (188)
T ss_dssp ------------------CSCSCSHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHH-HTTS---SEEEECTTSCT
T ss_pred ------------------cCCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCEEEecCcCH
Confidence 013578999999999998 56889999999 9999999 6655 6667775431
Q ss_pred -----c-cccCCH---HHHHHHHHHHHHHH
Q 003029 825 -----L-HYLRMK---MCMRFLSQNYLMMA 845 (856)
Q Consensus 825 -----~-~~l~~~---~~~~~~l~~~~~~~ 845 (856)
+ |.+.++ ..++++++.++..-
T Consensus 148 ~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~ 177 (188)
T 2r8e_A 148 LLIPRADYVTRIAGGRGAVREVCDLLLLAQ 177 (188)
T ss_dssp TTGGGSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHhcCCEEEeCCCCCcHHHHHHHHHHHhc
Confidence 2 677765 45667777777653
No 69
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.63 E-value=7.2e-08 Score=95.84 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC-------ccccCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF-------LHYLRM 830 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~-------~~~l~~ 830 (856)
.+|+.++++++++++ ++++.+++||| +.||.+| ++.+ +++|.+++.. .|.+.+
T Consensus 85 ~~k~~~l~~~~~~~~------~~~~~~~~vGD-~~nD~~~-~~~a---g~~v~~~~~~~~~~~~ad~v~~~ 144 (176)
T 3mmz_A 85 DRKDLALKQWCEEQG------IAPERVLYVGN-DVNDLPC-FALV---GWPVAVASAHDVVRGAARAVTTV 144 (176)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTCCHHHHHHSSEECSS
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHH-HHHC---CCeEECCChhHHHHHhCCEEecC
Confidence 679999999999999 67899999999 9999999 7765 5778886642 266666
No 70
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=98.62 E-value=1.8e-07 Score=91.21 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=94.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCce-EEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW-LAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lg-liaen 668 (856)
+.|+|+||+||||++....-..... ...........+|+.|.+ .|..++|+||++...++..+..+++. +...
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~- 76 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGN----EWKKFNTSDSAGIFWAHN-KGIPVGILTGEKTEIVRRRAEKLKVDYLFQG- 76 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSC----EEEEEEGGGHHHHHHHHH-TTCCEEEECSSCCHHHHHHHHHTTCSEEECS-
T ss_pred cceEEEEcCCCceEcCcEEEcCCCc----EEEEecCChHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEeecc-
Confidence 5789999999999985210000000 011122222336888876 69999999999988888888776531 1100
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
T Consensus 77 -------------------------------------------------------------------------------- 76 (164)
T 3e8m_A 77 -------------------------------------------------------------------------------- 76 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---- 824 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---- 824 (856)
.-.|..+++.++++++ ++++++++||| +.||.+| .+.+ ++++.+++..
T Consensus 77 -----------------~kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-~~~a---g~~~~~~~~~~~~~ 128 (164)
T 3e8m_A 77 -----------------VVDKLSAAEELCNELG------INLEQVAYIGD-DLNDAKL-LKRV---GIAGVPASAPFYIR 128 (164)
T ss_dssp -----------------CSCHHHHHHHHHHHHT------CCGGGEEEECC-SGGGHHH-HTTS---SEEECCTTSCHHHH
T ss_pred -----------------cCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEEcCChHHHHH
Confidence 1579999999999998 67899999999 9999999 6554 6677776542
Q ss_pred --c-cccCCHH---HHHHHHHHHH
Q 003029 825 --L-HYLRMKM---CMRFLSQNYL 842 (856)
Q Consensus 825 --~-~~l~~~~---~~~~~l~~~~ 842 (856)
+ |.+.+.. .++++++.++
T Consensus 129 ~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 129 RLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp TTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HhCcEEeccCCCCcHHHHHHHHHH
Confidence 2 6666643 3777777765
No 71
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=98.58 E-value=5.6e-07 Score=93.72 Aligned_cols=67 Identities=10% Similarity=-0.090 Sum_probs=50.8
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC-------------CccccC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS-------------FLHYLR 829 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-------------~~~~l~ 829 (856)
..+-.|+.+++.+++++| ++++++++||| +. ||+.| .+.++- .+|.|... +.|.+.
T Consensus 176 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~~~~~ 245 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDAD------CAPEEAVMIGD-DCRDDVDG-AQNIGM--LGILVKTGKYKAADEEKINPPPYLTCE 245 (259)
T ss_dssp ECSTTSHHHHHHHGGGGT------CCGGGEEEEES-CTTTTHHH-HHHTTC--EEEEESSTTCCTTGGGGSSSCCSEEES
T ss_pred EecCCCHHHHHHHHHHcC------CChHHEEEECC-CcHHHHHH-HHHCCC--cEEEECCCCCCcccccccCCCCCEEEC
Confidence 446678999999999999 67899999999 98 99999 777643 34555321 126788
Q ss_pred CHHHHHHHHHH
Q 003029 830 MKMCMRFLSQN 840 (856)
Q Consensus 830 ~~~~~~~~l~~ 840 (856)
+..++..+|.+
T Consensus 246 ~l~~l~~~l~~ 256 (259)
T 2ho4_A 246 SFPHAVDHILQ 256 (259)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 88888777654
No 72
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.57 E-value=7.9e-08 Score=92.17 Aligned_cols=69 Identities=16% Similarity=0.112 Sum_probs=52.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---HhhHHHHhcccCc--eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQEYNL--WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~~l~l--gl 664 (856)
+.|+||+|+||||++..... ...+.+.++++|++|.+ .|+.|+|+|||+ ...+..|+...++ .+
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~----------i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~ 70 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPR----------IGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYA 70 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTS----------CCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSE
T ss_pred CCeEEEEECcCCCCCCCCcc----------ccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEE
Confidence 47899999999999863110 12355789999999986 799999999998 5667778877653 56
Q ss_pred EeeCc
Q 003029 665 AAENG 669 (856)
Q Consensus 665 iaenG 669 (856)
++.|+
T Consensus 71 I~~n~ 75 (142)
T 2obb_A 71 ANKDY 75 (142)
T ss_dssp ESSSS
T ss_pred EEcCC
Confidence 77774
No 73
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=98.55 E-value=1.5e-07 Score=101.62 Aligned_cols=192 Identities=14% Similarity=0.089 Sum_probs=107.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++.. .+.+.+.++|++|.+ .|+.|+++| ||+...+...+..+++
T Consensus 20 ~~k~i~~D~DGTL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~ 83 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNGE---------------RAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFARLGFGGLR 83 (306)
T ss_dssp HCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTCCSCC
T ss_pred hCCEEEECCCCcEecCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHhcCCCcCC
Confidence 47899999999999752 355789999999986 799999999 6888888888777643
Q ss_pred --eEEeeCceEEEe--c--------CCeeeecccccCChHHHHHHHHHHHHHHhc-CCC---cEEeeecceEEEEeecCC
Q 003029 663 --WLAAENGMFLRC--T--------TGKWMTTMPEHLNMEWVDSLKHVFEYFTER-TPR---SHFEQRETSLVWNYKYAD 726 (856)
Q Consensus 663 --gliaenG~~i~~--~--------~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r-t~g---s~ie~k~~si~~~y~~~d 726 (856)
.+++.||+.+.. . +.. .... . ...+...++...-. ... .+.........+...+.
T Consensus 84 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~-v~~~----g---~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~- 154 (306)
T 2oyc_A 84 AEQLFSSALCAARLLRQRLPGPPDAPGA-VFVL----G---GEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDE- 154 (306)
T ss_dssp GGGEEEHHHHHHHHHHHHCCSCSSSCCE-EEEE----S---CHHHHHHHHHTTCEETTSCCCC---CCCEEEEEECCCT-
T ss_pred hhhEEcHHHHHHHHHHhhCCccccCCCe-EEEE----C---CHHHHHHHHHCCCEeecccccccccCCCCCEEEEeCCC-
Confidence 366666554321 0 110 0000 0 01222223221100 000 01111111222221111
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcC-c------------------------EEEEEeCCCCHHHHHHHHHHHhC
Q 003029 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGS-K------------------------SVEVRAVGVTKGAAIDRILAEIV 781 (856)
Q Consensus 727 ~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~-~------------------------~vEV~p~gvnKG~av~~ll~~l~ 781 (856)
.+......++++.| ... .. +-++.+. . ..|....+..|+.+++.+++++|
T Consensus 155 -~~~~~~~~~~l~~l-~~~--g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg 229 (306)
T 2oyc_A 155 -HFSFAKLREACAHL-RDP--EC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFS 229 (306)
T ss_dssp -TCCHHHHHHHHHHH-TST--TS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSC
T ss_pred -CCCHHHHHHHHHHH-HcC--CC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcC
Confidence 11112234555555 321 11 1122111 1 11334567889999999999999
Q ss_pred cCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeC
Q 003029 782 HSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 782 ~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~ 821 (856)
++++++++||| +. ||+.| .+.++- -+|.|.
T Consensus 230 ------i~~~e~l~vGD-~~~~Di~~-a~~aG~--~~i~v~ 260 (306)
T 2oyc_A 230 ------IDPARTLMVGD-RLETDILF-GHRCGM--TTVLTL 260 (306)
T ss_dssp ------CCGGGEEEEES-CTTTHHHH-HHHHTC--EEEEES
T ss_pred ------CChHHEEEECC-CchHHHHH-HHHCCC--eEEEEC
Confidence 67899999999 95 99999 776642 345553
No 74
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=98.52 E-value=1.9e-07 Score=94.21 Aligned_cols=46 Identities=20% Similarity=0.107 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
-+|+.+++.++++++ ++++.+++||| +.||++| ++.+ ++++.+++.
T Consensus 93 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-~~~a---g~~~~~~~~ 138 (191)
T 3n1u_A 93 VDKRSAYQHLKKTLG------LNDDEFAYIGD-DLPDLPL-IQQV---GLGVAVSNA 138 (191)
T ss_dssp SSCHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTC
T ss_pred CChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHH-HHHC---CCEEEeCCc
Confidence 478999999999998 67899999999 9999999 6655 677778764
No 75
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.49 E-value=6.9e-07 Score=88.32 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH---HHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM---CMRFL 837 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~---~~~~~ 837 (856)
+|+.+++.++++++ ++++++++||| +.||.+| ++.+ ++++.+++.. + |-+.+.. .++++
T Consensus 83 ~K~~~l~~~~~~~g------i~~~~~~~vGD-~~nDi~~-~~~a---g~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~ 151 (168)
T 3ewi_A 83 DKLATVDEWRKEMG------LCWKEVAYLGN-EVSDEEC-LKRV---GLSAVPADACSGAQKAVGYICKCSGGRGAIREF 151 (168)
T ss_dssp CHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHH-HHHS---SEEEECTTCCHHHHTTCSEECSSCTTTTHHHHH
T ss_pred ChHHHHHHHHHHcC------cChHHEEEEeC-CHhHHHH-HHHC---CCEEEeCChhHHHHHhCCEEeCCCCCccHHHHH
Confidence 59999999999998 67899999999 9999999 7655 6788887642 2 5555432 36667
Q ss_pred HHHHHHH
Q 003029 838 SQNYLMM 844 (856)
Q Consensus 838 l~~~~~~ 844 (856)
.+.++..
T Consensus 152 ~~~il~~ 158 (168)
T 3ewi_A 152 AEHIFLL 158 (168)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7766643
No 76
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=98.48 E-value=1.5e-06 Score=87.91 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=95.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
.+.|+|+||+||||++....- ....+............|+.|.+ .|..++|+||++...++..+..+++.-
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~----~~~~~~~~~~~~~d~~~l~~L~~-~G~~~~ivT~~~~~~~~~~l~~lgi~~---- 93 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYM----GNQGEELKTFHTRDGYGVKALMN-AGIEIAIITGRRSQIVENRMKALGISL---- 93 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEE----CTTSCEECCCCTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHTTCCE----
T ss_pred hCCCEEEEcCCCCcCCCcEEE----ccCchhhheeecccHHHHHHHHH-CCCEEEEEECcCHHHHHHHHHHcCCcE----
Confidence 468999999999999842100 00000112233334456888886 699999999998777766666554210
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
. |.
T Consensus 94 -------------~---------------------------------------~~------------------------- 96 (195)
T 3n07_A 94 -------------I---------------------------------------YQ------------------------- 96 (195)
T ss_dssp -------------E---------------------------------------EC-------------------------
T ss_pred -------------E---------------------------------------ee-------------------------
Confidence 0 00
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---- 824 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---- 824 (856)
+ .-+|+.+++.++++++ ++++++++||| +.||++| ++.+ +++|.+++..
T Consensus 97 -------~---------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~nDi~~-~~~a---g~~va~~na~~~~~ 149 (195)
T 3n07_A 97 -------G---------QDDKVQAYYDICQKLA------IAPEQTGYIGD-DLIDWPV-MEKV---ALRVCVADGHPLLA 149 (195)
T ss_dssp -------S---------CSSHHHHHHHHHHHHC------CCGGGEEEEES-SGGGHHH-HTTS---SEEEECTTSCHHHH
T ss_pred -------C---------CCCcHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHH-HHHC---CCEEEECChHHHHH
Confidence 0 0379999999999999 67899999999 9999999 7765 6788887652
Q ss_pred --c-cccCCHH---HHHHHHHHHHHH
Q 003029 825 --L-HYLRMKM---CMRFLSQNYLMM 844 (856)
Q Consensus 825 --~-~~l~~~~---~~~~~l~~~~~~ 844 (856)
+ |-+.+.. .++++.+.++..
T Consensus 150 ~~ad~v~~~~~~~G~~~~~~~~il~~ 175 (195)
T 3n07_A 150 QRANYVTHIKGGHGAVREVCDLILQA 175 (195)
T ss_dssp HHCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred HhCCEEEcCCCCCCHHHHHHHHHHHh
Confidence 2 5555432 356666666554
No 77
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.47 E-value=3.5e-06 Score=94.08 Aligned_cols=158 Identities=14% Similarity=0.048 Sum_probs=103.9
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
...+++++|++. .|+...+..+++.+.+ .+ +.++.++++.. ... ++++ + ...|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-~~-----~~~~~~~g~~~-~~~-------~l~~----~--------~~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAG-LD-----ADVLVASGPSL-DVS-------GLGE----V--------PANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHT-SS-----SEEEEECCSSC-CCT-------TCCC----C--------CTTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHc-CC-----CEEEEEECCCC-Chh-------hhcc----C--------CCcE
Confidence 345778899996 6676666666665533 22 23444443221 000 1110 0 0135
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--C
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 513 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~--d 513 (856)
.+ .++++ +..+|+.||+||.+|- ..+++|||+|+ .|+|+....+ .++.+ +..|++++|. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~g----~~t~~Ea~a~G----~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHGG----SGTTLGALGAG----VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESCC----HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECCc----hHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 67774 7788999999998762 36899999994 8888865554 55555 3579999887 9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 514 ~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
+++++++|.++|+++ +.+.++.+..++....+++..-++.+.+-+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999864 466666666677777777777666554443
No 78
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=98.42 E-value=8.8e-07 Score=88.97 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
.+|+.+++.+++++| ++++.+++||| +.||++| ++.+ ++++.+++.
T Consensus 93 ~~K~~~~~~~~~~~g------~~~~~~~~vGD-~~nDi~~-~~~a---g~~~~~~~~ 138 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQ------LGYEQVAYLGD-DLPDLPV-IRRV---GLGMAVANA 138 (189)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTS
T ss_pred CChHHHHHHHHHHcC------CChhHEEEECC-CHHHHHH-HHHC---CCeEEeCCc
Confidence 689999999999999 67899999999 9999999 6655 677888664
No 79
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.40 E-value=2e-05 Score=94.31 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=105.5
Q ss_pred CCceEEEeecccccCChHHH-HHHHHHHH--HhCcCccC-ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQK-LLAFEKFL--EENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~-L~Af~~~l--~~~P~~~~-~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|.|++..||.... +..+++++ ..+|+..- .+++|..|.+..++ ...+.+-+.+.+++..+|..=...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56889999999999999998 88888875 35664311 35677666544333 3334566678888888875311112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh----cc-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----LG-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~----lg-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|..-|+.-+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 22477755 4466777788999999999999 99999999999986 56666666676533 34 4789997
Q ss_pred CCCHHHHHHHH
Q 003029 511 PWNITEVANAI 521 (856)
Q Consensus 511 P~d~~~lA~ai 521 (856)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 65 6666 444
No 80
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.40 E-value=4e-07 Score=91.10 Aligned_cols=46 Identities=9% Similarity=0.122 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
.+.+|+.++..+++++| ++++++++||| +.||++| ++.+ +++|.++
T Consensus 140 ~~~~K~~~l~~~~~~lg------i~~~~~~~iGD-~~~Di~~-~~~a---g~~~~~~ 185 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISM-FKKA---GLKIAFC 185 (211)
T ss_dssp STTHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHC---SEEEEES
T ss_pred CCccHHHHHHHHHHHcC------CCHHHEEEEec-ChhHHHH-HHHC---CCEEEEC
Confidence 47799999999999999 67899999999 9999999 7766 4556665
No 81
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.37 E-value=2e-05 Score=94.02 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=107.7
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l~--~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|.|++..||... ++..+.++++ .+|+.. ..+++|..|.+..++ ...+.+-+.+..++.-||..=...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688999999999999999 8888888765 455421 247777666544333 3334556677888887776211111
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 604 ~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 22477644 4577777888999999999999 99999999999986 556668877777654 5 5899997
Q ss_pred CCCHHHHHH
Q 003029 511 PWNITEVAN 519 (856)
Q Consensus 511 P~d~~~lA~ 519 (856)
. +.+++.+
T Consensus 678 ~-~~~ev~~ 685 (796)
T 1l5w_A 678 H-TVEQVKA 685 (796)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 7 7777763
No 82
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.36 E-value=1.2e-05 Score=95.91 Aligned_cols=150 Identities=13% Similarity=0.164 Sum_probs=107.1
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l~--~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|.|++..||... ++..+.++++ .+|+.. ..+++|..|.+..++ ...+.+-+.+..++.-||..=...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688999999999999999 8999988875 566421 246777666544333 3334556677888887776211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 22477755 4466777788999999999999 99999999999986 555667777777654 5 5899997
Q ss_pred C--CCHHHHH
Q 003029 511 P--WNITEVA 518 (856)
Q Consensus 511 P--~d~~~lA 518 (856)
. .++.++-
T Consensus 668 ~~~~ev~~l~ 677 (796)
T 2c4m_A 668 ARVEELPALR 677 (796)
T ss_dssp CCTTTHHHHH
T ss_pred CchhhHHHHH
Confidence 6 5665544
No 83
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.35 E-value=1.3e-06 Score=87.49 Aligned_cols=73 Identities=10% Similarity=-0.098 Sum_probs=55.5
Q ss_pred CcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------Cccc
Q 003029 757 SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHY 827 (856)
Q Consensus 757 ~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~ 827 (856)
....++.+.+.+|+.+++.+.+.++ ++++++++||| +.||++| ++ ++-..+.|.++.. +.|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~vGD-~~~Di~~-~~-~G~~~~~v~~~~~~~~~~~~~~ad~v 207 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKG------LIDGEVIAIGD-GYTDYQL-YE-KGYATKFIAYMEHIEREKVINLSKYV 207 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGG------GCCSEEEEEES-SHHHHHH-HH-HTSCSEEEEECSSCCCHHHHHHCSEE
T ss_pred CceeccCCCCCCcccHHHHHHHHhC------CCCCCEEEEEC-CHhHHHH-Hh-CCCCcEEEeccCccccHHHHhhccee
Confidence 3456788889999999999999888 56899999999 9999999 85 4333455555432 2288
Q ss_pred cCCHHHHHHHH
Q 003029 828 LRMKMCMRFLS 838 (856)
Q Consensus 828 l~~~~~~~~~l 838 (856)
+++..++..+|
T Consensus 208 ~~~~~el~~~l 218 (219)
T 3kd3_A 208 ARNVAELASLI 218 (219)
T ss_dssp ESSHHHHHHHH
T ss_pred eCCHHHHHHhh
Confidence 88888877654
No 84
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=98.34 E-value=1.5e-06 Score=89.03 Aligned_cols=67 Identities=18% Similarity=0.124 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH---HHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM---CMRF 836 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~---~~~~ 836 (856)
-+|+.+++.++++++ ++++.+++||| +.||++| ++.+ ++++.+++.. + |-+.++. .+++
T Consensus 123 k~K~~~l~~~~~~lg------~~~~~~~~vGD-s~nDi~~-~~~a---g~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e 191 (211)
T 3ij5_A 123 SDKLVAYHELLATLQ------CQPEQVAYIGD-DLIDWPV-MAQV---GLSVAVADAHPLLLPKAHYVTRIKGGRGAVRE 191 (211)
T ss_dssp SSHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HTTS---SEEEECTTSCTTTGGGSSEECSSCTTTTHHHH
T ss_pred CChHHHHHHHHHHcC------cCcceEEEEcC-CHHHHHH-HHHC---CCEEEeCCccHHHHhhCCEEEeCCCCCcHHHH
Confidence 469999999999999 67899999999 9999999 7655 6777776531 2 6665552 4677
Q ss_pred HHHHHHHH
Q 003029 837 LSQNYLMM 844 (856)
Q Consensus 837 ~l~~~~~~ 844 (856)
+++.++.+
T Consensus 192 ~~~~ll~~ 199 (211)
T 3ij5_A 192 VCDLILLA 199 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766653
No 85
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=98.28 E-value=2.6e-06 Score=86.90 Aligned_cols=199 Identities=10% Similarity=0.040 Sum_probs=110.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
+.|+|+||+||||++. ...+.+.. .++++++.. +...+...+|++....-..+..... ....
T Consensus 24 ~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~~g~-~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~ 86 (231)
T 3kzx_A 24 QPTAVIFDWYNTLIDT--------------SINIDRTTFYQVLDQMGY-KNIDLDSIPNSTIPKYLITLLGKRW--KEAT 86 (231)
T ss_dssp CCSEEEECTBTTTEET--------------TSSCCHHHHHHHHHHTTC-CCCCCTTSCTTTHHHHHHHHHGGGH--HHHH
T ss_pred CCCEEEECCCCCCcCC--------------chhHHHHHHHHHHHHcCC-CHHHHHHHhCccHHHHHHHHhCchH--HHHH
Confidence 5799999999999986 34567788 899999875 5677777888876543222211000 0000
Q ss_pred ceEEEe-c-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCC
Q 003029 669 GMFLRC-T-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (856)
Q Consensus 669 G~~i~~-~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~ 746 (856)
..+... . ....... ...+.+.++++...++ |. .+.+- .+.... .....++.+ . +.
T Consensus 87 ~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~--g~-------~~~i~-T~~~~~----~~~~~l~~~-g-l~ 143 (231)
T 3kzx_A 87 ILYENSLEKSQKSDNF-------MLNDGAIELLDTLKEN--NI-------TMAIV-SNKNGE----RLRSEIHHK-N-LT 143 (231)
T ss_dssp HHHHHHHHHCCSCCCC-------EECTTHHHHHHHHHHT--TC-------EEEEE-EEEEHH----HHHHHHHHT-T-CG
T ss_pred HHHHHHHhhhcccccc-------eECcCHHHHHHHHHHC--CC-------eEEEE-ECCCHH----HHHHHHHHC-C-ch
Confidence 000000 0 0000000 0112344455544432 21 11111 111111 122333333 1 11
Q ss_pred CCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcc-eEEEEecCCcccccccccccccCcceEEeCCCC-
Q 003029 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID-YVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF- 824 (856)
Q Consensus 747 ~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d-~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~- 824 (856)
..... ++.+.. ...+-.|+.+++.+++++| ++++ ++++||| +.||++| .+.++ -.+|.|++..
T Consensus 144 ~~f~~-i~~~~~----~~~~Kp~~~~~~~~~~~lg------i~~~~~~v~vGD-~~~Di~~-a~~aG--~~~v~~~~~~~ 208 (231)
T 3kzx_A 144 HYFDS-IIGSGD----TGTIKPSPEPVLAALTNIN------IEPSKEVFFIGD-SISDIQS-AIEAG--CLPIKYGSTNI 208 (231)
T ss_dssp GGCSE-EEEETS----SSCCTTSSHHHHHHHHHHT------CCCSTTEEEEES-SHHHHHH-HHHTT--CEEEEECC---
T ss_pred hheee-EEcccc----cCCCCCChHHHHHHHHHcC------CCcccCEEEEcC-CHHHHHH-HHHCC--CeEEEECCCCC
Confidence 11121 222221 2345667899999999999 6677 8999999 9999999 77664 2477776642
Q ss_pred ---ccccCCHHHHHHHHHHHHH
Q 003029 825 ---LHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 825 ---~~~l~~~~~~~~~l~~~~~ 843 (856)
.+.+.+..++..+|++++.
T Consensus 209 ~~~~~~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 209 IKDILSFKNFYDIRNFICQLIN 230 (231)
T ss_dssp --CCEEESSHHHHHHHHHHHHC
T ss_pred CCCceeeCCHHHHHHHHHHHhc
Confidence 2899999999999998864
No 86
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.26 E-value=5.6e-06 Score=91.91 Aligned_cols=155 Identities=11% Similarity=0.049 Sum_probs=102.4
Q ss_pred CCceEEEeecccccCCh-HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi-~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...+++++|++...|+. ..+++++... ++.|+++ +++++.+ +....+ . .+ ...
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l----~----~~--------~~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALL----T----DL--------PDN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGC----T----TC--------CTT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhc----c----cC--------CCC
Confidence 34677788999886666 8888888877 7777643 5555432 111111 1 00 013
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC----CCchhhc--cCCeEEECC---
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNP--- 511 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~----aG~~~~l--g~~g~lVnP--- 511 (856)
|. +.++++..++ +..||++|.. |-..+.+|||+|+ .|+|+... .+.++.+ +..|++++|
T Consensus 272 v~-~~~~~~~~~l---l~~ad~~v~~----~G~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 339 (391)
T 3tsa_A 272 AR-IAESVPLNLF---LRTCELVICA----GGSGTAFTATRLG----IPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA 339 (391)
T ss_dssp EE-ECCSCCGGGT---GGGCSEEEEC----CCHHHHHHHHHTT----CCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH
T ss_pred EE-EeccCCHHHH---HhhCCEEEeC----CCHHHHHHHHHhC----CCEEecCCcccHHHHHHHHHHcCCEEecCcccc
Confidence 55 4778877654 4999999954 4456889999994 78888443 3344444 346899998
Q ss_pred -CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003029 512 -WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (856)
Q Consensus 512 -~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (856)
.|+++++++|.++|+++. .+.++.+...+......+...++.+
T Consensus 340 ~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 340 QSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 799999999999999764 4555555555555666666655544
No 87
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=98.25 E-value=4.4e-06 Score=83.35 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=49.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccc-----------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-HhhHHHH
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQI-----------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKN 656 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~-----------~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~ 656 (856)
+..|+|+||+||||++..... ..+... ......+.|.+.++|++|.+ .|+.++|+||++ ...++..
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~~~~~~~~~~ 102 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRTSEIEGANQL 102 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECCSCHHHHHHH
T ss_pred hccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCCCChHHHHHH
Confidence 457899999999998542100 000000 01234678899999999986 699999999998 6777777
Q ss_pred hcccC
Q 003029 657 FQEYN 661 (856)
Q Consensus 657 ~~~l~ 661 (856)
+..++
T Consensus 103 l~~~g 107 (187)
T 2wm8_A 103 LELFD 107 (187)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76654
No 88
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=98.25 E-value=2.3e-06 Score=84.32 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=40.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
+|++|||+||||+.....- .. .....++.|.+.++|++|.+ .|..++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~---~~--~~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAF---VK--SPDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTC---CC--SGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCcc---CC--CHHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 4799999999999763210 00 01244678899999999986 6999999999873
No 89
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.21 E-value=1e-05 Score=90.19 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=66.0
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC----CCchhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~----aG~~~~l--g~~g~lVnP~-- 512 (856)
|.+ .++++ ...++..||++|. .|-+.++.|||+|+ .|+|+... .+.++.+ ...|+++++.
T Consensus 286 v~~-~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VLA-AGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG----VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EEE-ESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EEE-eCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 554 67776 4567778999995 44467899999994 88888544 3555555 3468999887
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
|.++++++|.++|+++. .|.++.+..++......+...++
T Consensus 354 ~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 354 GVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp ---CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 78999999999999764 45555455555555565555443
No 90
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=98.18 E-value=5.9e-07 Score=93.34 Aligned_cols=70 Identities=9% Similarity=-0.083 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCC---------------CCcc-ccCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDS---------------SFLH-YLRM 830 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~---------------~~~~-~l~~ 830 (856)
.++.++..+++++| ++++++++||| +. ||+.| .+.++- .+|.|.. .+.+ .+.+
T Consensus 163 p~~~~~~~~~~~l~------~~~~~~i~iGD-~~~~Di~~-a~~aG~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~ 232 (251)
T 2pke_A 163 KDPQTYARVLSEFD------LPAERFVMIGN-SLRSDVEP-VLAIGG--WGIYTPYAVTWAHEQDHGVAADEPRLREVPD 232 (251)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHH-HHHTTC--EEEECCCC-------------CCTTEEECSS
T ss_pred CCHHHHHHHHHHhC------cCchhEEEECC-CchhhHHH-HHHCCC--EEEEECCCCccccccccccccCCCCeeeeCC
Confidence 46899999999999 67899999999 98 99999 776643 2344421 1225 7999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 003029 831 KMCMRFLSQNYLMMARA 847 (856)
Q Consensus 831 ~~~~~~~l~~~~~~~~~ 847 (856)
..++..+|+++...|..
T Consensus 233 ~~el~~~l~~~~~~~~~ 249 (251)
T 2pke_A 233 PSGWPAAVRALDAQAGR 249 (251)
T ss_dssp GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChhhcc
Confidence 99999999988765543
No 91
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=98.17 E-value=1.9e-06 Score=80.87 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=41.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.|+|+||+||||++....+ . ....+++.+.++|++|.+ +|+.++|+|||+...
T Consensus 1 ik~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 4799999999999863210 0 012577899999999986 699999999998743
No 92
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.16 E-value=2.7e-05 Score=91.07 Aligned_cols=172 Identities=9% Similarity=-0.040 Sum_probs=109.9
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE-EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 363 ~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~-v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
..++.+..|+ .|..+..++++.+++++.|+. +.++. ++. . .+... .+.+++.+. .|.. .|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~-~--~g~~~-~~~~~~~~~--GI~~--------Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ-S--NGITH-PYVERFIKS--YLGD--------SA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS-C--CGGGH-HHHHHHHHH--HHGG--------GE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC-C--chhhH-HHHHHHHHc--CCCc--------cE
Confidence 3456667775 699999999999999999973 22222 331 1 22222 222222221 2221 35
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--------cCCeEEECCCC
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--------GAGAILVNPWN 513 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--------g~~g~lVnP~d 513 (856)
. |.+.++.++..++|+.|||||.|+.+.| |++++|||+|| .|||.....+.+.-+ |-...+| ..|
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG----VPVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG----LVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT----CCEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC----CCEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 5 4789999999999999999999998877 99999999993 677765544444332 3333223 247
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHhH
Q 003029 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTV 563 (856)
Q Consensus 514 ~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~~ 563 (856)
.++.+++..++.++++ .+.+..+++++...+ ++ .|.+.|-+.++++.
T Consensus 575 ~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 8999999999988754 566655555554322 22 45555555555443
No 93
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.11 E-value=3e-06 Score=85.07 Aligned_cols=64 Identities=9% Similarity=-0.067 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCCC-------ccccCCHHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSSF-------LHYLRMKMCMRFL 837 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~~-------~~~l~~~~~~~~~ 837 (856)
+-.|+.+++.+++++| ++++++++||| +.||++| .+.+ |+ +|.|++.. .|.+.+..++...
T Consensus 126 ~kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~Di~~-a~~a---G~~~i~v~~~~~~~~~~ad~v~~~~~el~~~ 194 (205)
T 3m9l_A 126 PKPHPGGLLKLAEAWD------VSPSRMVMVGD-YRFDLDC-GRAA---GTRTVLVNLPDNPWPELTDWHARDCAQLRDL 194 (205)
T ss_dssp CTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHH---TCEEEECSSSSCSCGGGCSEECSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHc---CCEEEEEeCCCCcccccCCEEeCCHHHHHHH
Confidence 4457889999999999 67899999999 9999999 6655 54 88886642 2888999988887
Q ss_pred HHH
Q 003029 838 SQN 840 (856)
Q Consensus 838 l~~ 840 (856)
|++
T Consensus 195 ~~~ 197 (205)
T 3m9l_A 195 LSA 197 (205)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 94
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=98.10 E-value=2.7e-06 Score=86.78 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=41.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
++|+++||+||||+....-. .. .....+.+.+.++|++|.+ .|+.++|+|+++..
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~----~~--~~~~~~~pg~~e~L~~L~~-~G~~~~ivTn~~~~ 78 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSGI 78 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTHH
T ss_pred cCCEEEEcCCCCeECCCCcc----cC--cccCcCCcCHHHHHHHHHH-CCCeEEEEECcCCc
Confidence 46899999999999763111 00 1234677899999999986 69999999999864
No 95
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=98.09 E-value=7.1e-07 Score=90.92 Aligned_cols=69 Identities=9% Similarity=-0.076 Sum_probs=52.7
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC-------CccccCCHHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS-------FLHYLRMKMCMRFL 837 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-------~~~~l~~~~~~~~~ 837 (856)
+-.|+.+++.+++++| ++++++++||| +. ||++| .+.++-..+.|.-++. +.|.+.+..++..+
T Consensus 154 ~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~-a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~ 225 (234)
T 3u26_A 154 FKPHPRIFELALKKAG------VKGEEAVYVGD-NPVKDCGG-SKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKI 225 (234)
T ss_dssp CTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHH-HHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHH
T ss_pred CCcCHHHHHHHHHHcC------CCchhEEEEcC-CcHHHHHH-HHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHH
Confidence 4567888999999999 67899999999 97 99999 8777533233332332 22889999999999
Q ss_pred HHHHH
Q 003029 838 SQNYL 842 (856)
Q Consensus 838 l~~~~ 842 (856)
|+++.
T Consensus 226 l~~~~ 230 (234)
T 3u26_A 226 VDELN 230 (234)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 88764
No 96
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.09 E-value=1.3e-06 Score=88.70 Aligned_cols=70 Identities=10% Similarity=-0.148 Sum_probs=54.2
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHH
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMC 833 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~ 833 (856)
.+.+..|+.+++.+++++| ++++++++||| +.||++| .+.++-..+.|.-++. +.|.+.+..+
T Consensus 138 ~~~~kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~-a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~e 209 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLN------IKSDDAIMIGD-REYDVIG-ALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDE 209 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHH
T ss_pred CCCCCCCHHHHHHHHHHhC------cCcccEEEECC-CHHHHHH-HHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHH
Confidence 3667899999999999999 67889999999 9999999 8877543333333332 1288889988
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 210 l~~~~~~ 216 (226)
T 3mc1_A 210 LHKKILE 216 (226)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8888764
No 97
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.09 E-value=9.7e-06 Score=81.61 Aligned_cols=47 Identities=9% Similarity=0.151 Sum_probs=39.8
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| ++.+ |+++.+.
T Consensus 138 ~~~k~k~~~~~~~~~~~g------~~~~~~i~vGD-s~~Di~~-a~~a---G~~~~~~ 184 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLN------ISKTNTLVVGD-GANDLSM-FKHA---HIKIAFN 184 (217)
T ss_dssp CSTTHHHHHHHHHHHHHT------CCSTTEEEEEC-SGGGHHH-HTTC---SEEEEES
T ss_pred CCCCChHHHHHHHHHHcC------CCHhHEEEEeC-CHHHHHH-HHHC---CCeEEEC
Confidence 467899999999999999 67899999999 9999999 6655 5666663
No 98
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.08 E-value=3.2e-06 Score=86.41 Aligned_cols=70 Identities=9% Similarity=-0.089 Sum_probs=54.9
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHH
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMC 833 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~ 833 (856)
.+.+..|+.+++.+++++| ++++++++||| +.||++| .+.++-..+.|.-++. +.|.+.+..+
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~-a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~e 227 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLG------IPPERCVVIGD-GVPDAEM-GRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPA 227 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHH
T ss_pred CCCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH-HHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHH
Confidence 3567889999999999999 67899999999 9999999 8877543334433432 2288999999
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 228 l~~~l~~ 234 (237)
T 4ex6_A 228 AVTAVLD 234 (237)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9888875
No 99
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=98.06 E-value=3e-07 Score=93.79 Aligned_cols=208 Identities=10% Similarity=0.034 Sum_probs=106.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh-hcCCCCeEEEEcCCCHhh-HHHHhcccCce----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL-CHDPKTTIVVLSGSDRNV-LDKNFQEYNLW---- 663 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L-~~d~g~~V~I~SGR~~~~-l~~~~~~l~lg---- 663 (856)
.+|+|+||+||||++.. ....+...++++++ .......+..++||+... +..++..+++.
T Consensus 3 ~~k~iifDlDGTL~d~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 68 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVE--------------SMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEI 68 (234)
T ss_dssp CCEEEEECCBTTTEEEC--------------THHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHH
T ss_pred cceEEEEcCCCCcccCc--------------cchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccc
Confidence 46899999999999862 23456677778773 322223577889999877 66666654431
Q ss_pred ---EEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHH
Q 003029 664 ---LAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (856)
Q Consensus 664 ---liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~ 740 (856)
+...+|.+...-...+.. . .....+.+.++++...++ +|. .+.+- -+...+. ....++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~l~~l~~~-~g~-------~~~i~-t~~~~~~----~~~~l~~ 130 (234)
T 2hcf_A 69 ADKFDKAKETYIALFRERARR---E--DITLLEGVRELLDALSSR-SDV-------LLGLL-TGNFEAS----GRHKLKL 130 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHCCG---G--GEEECTTHHHHHHHHHTC-TTE-------EEEEE-CSSCHHH----HHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHhcc---C--CCCcCCCHHHHHHHHHhC-CCc-------eEEEE-cCCcHHH----HHHHHHH
Confidence 222233322110000000 0 000012344455544322 121 11111 1112111 1122222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEe
Q 003029 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 741 L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V 820 (856)
+ .+...... ++.+.. +.+++-.+..+++++++++|.. ++++++++||| +.||++| .+.++-. +|.|
T Consensus 131 ~--~l~~~f~~-~~~~~~---~~~~~k~~~~~~~~~~~~lg~~----~~~~~~i~iGD-~~~Di~~-a~~aG~~--~i~v 196 (234)
T 2hcf_A 131 P--GIDHYFPF-GAFADD---ALDRNELPHIALERARRMTGAN----YSPSQIVIIGD-TEHDIRC-ARELDAR--SIAV 196 (234)
T ss_dssp T--TCSTTCSC-EECTTT---CSSGGGHHHHHHHHHHHHHCCC----CCGGGEEEEES-SHHHHHH-HHTTTCE--EEEE
T ss_pred C--CchhhcCc-ceecCC---CcCccchHHHHHHHHHHHhCCC----CCcccEEEECC-CHHHHHH-HHHCCCc--EEEE
Confidence 2 11111111 222321 1122224567889999998710 24789999999 9999999 7766422 3555
Q ss_pred CCC-----------CccccCCHHHHHHHHHHHHH
Q 003029 821 DSS-----------FLHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 821 ~~~-----------~~~~l~~~~~~~~~l~~~~~ 843 (856)
... +.|.+.+..++..+|++++.
T Consensus 197 ~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 197 ATGNFTMEELARHKPGTLFKNFAETDEVLASILT 230 (234)
T ss_dssp CCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC
T ss_pred cCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHHhc
Confidence 432 23778899999999988763
No 100
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=98.03 E-value=8.6e-06 Score=85.37 Aligned_cols=67 Identities=7% Similarity=0.119 Sum_probs=50.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc----cCc---
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE----YNL--- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~----l~l--- 662 (856)
..|+|+||+||||++.. ..+ +.+.++|+.|.+ .|..++++|||+......+... +++
T Consensus 4 ~~k~v~fDlDGTL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~ 67 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK--------------EPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 67 (264)
T ss_dssp SCCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHHHHSCCCCC
T ss_pred cCCEEEEeCCCeEEeCC--------------EEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Confidence 47899999999999862 224 688899999986 6999999999988776665543 332
Q ss_pred --eEEeeCceEE
Q 003029 663 --WLAAENGMFL 672 (856)
Q Consensus 663 --gliaenG~~i 672 (856)
.+++.+|+.+
T Consensus 68 ~~~~~~~~~~~~ 79 (264)
T 1yv9_A 68 ASLVYTATLATI 79 (264)
T ss_dssp GGGEEEHHHHHH
T ss_pred hhhEEcHHHHHH
Confidence 3666666543
No 101
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=98.00 E-value=6e-06 Score=84.87 Aligned_cols=66 Identities=9% Similarity=-0.085 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC---------CC-ccccCCHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---------SF-LHYLRMKMCMRF 836 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---------~~-~~~l~~~~~~~~ 836 (856)
-.|..++..+++++| ++++++++||| +.||+.| .+.++- .++.|.. .+ .|.+.+..++..
T Consensus 161 Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~ 230 (240)
T 2no4_A 161 KPDPRIYQFACDRLG------VNPNEVCFVSS-NAWDLGG-AGKFGF--NTVRINRQGNPPEYEFAPLKHQVNSLSELWP 230 (240)
T ss_dssp TTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHHTC--EEEEECTTCCCCCCTTSCCSEEESSGGGHHH
T ss_pred CCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHH-HHHCCC--EEEEECCCCCCCcccCCCCceeeCCHHHHHH
Confidence 357788999999999 67899999999 9999999 776642 2344421 13 467888999988
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
+|++++
T Consensus 231 ~l~~~~ 236 (240)
T 2no4_A 231 LLAKNV 236 (240)
T ss_dssp HHCC--
T ss_pred HHHHhh
Confidence 887766
No 102
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.97 E-value=1.1e-07 Score=95.84 Aligned_cols=70 Identities=9% Similarity=-0.033 Sum_probs=47.5
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.++..+++++| ++++.+++||| +.||++| ++.++- .++.|.+. +.|.+.+..
T Consensus 142 ~~~k~~~~~~~~~~~~~~------~~~~~~i~iGD-~~nDi~~-~~~aG~--~~~~~~~~~~~~~~l~~~~ad~v~~~~~ 211 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLK------ACPEEVLYIGD-STVDAGT-AAAAGV--SFTGVTSGMTTAQEFQAYPYDRIISTLG 211 (225)
T ss_dssp SSCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEETTSSCCTTGGGGSCCSEEESSGG
T ss_pred CCCCCChHHHHHHHHHhC------CChHHeEEEcC-CHHHHHH-HHHCCC--eEEEECCCCCChHHHhhcCCCEEECCHH
Confidence 445677899999999999 67899999999 9999999 876632 24454321 127788888
Q ss_pred HHHHHHHHHHH
Q 003029 833 CMRFLSQNYLM 843 (856)
Q Consensus 833 ~~~~~l~~~~~ 843 (856)
++..+|+++..
T Consensus 212 el~~~l~~~~~ 222 (225)
T 3d6j_A 212 QLISVPEDKSG 222 (225)
T ss_dssp GGC--------
T ss_pred HHHHhhhhhcC
Confidence 88888877653
No 103
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=97.95 E-value=2.9e-07 Score=93.68 Aligned_cols=67 Identities=7% Similarity=-0.034 Sum_probs=51.6
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC---------CccccCCHHHH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMCM 834 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~~ 834 (856)
.+-.|+.+++.+++++| ++++++++||| +. ||+.| .+.++- .++.|... +.|.+.+..++
T Consensus 153 ~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~-a~~aG~--~~~~v~~~~~~~~~~~~~~~~~~~l~el 222 (230)
T 3vay_A 153 IGKPDPAPFLEALRRAK------VDASAAVHVGD-HPSDDIAG-AQQAGM--RAIWYNPQGKAWDADRLPDAEIHNLSQL 222 (230)
T ss_dssp CCTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHH-HHHTTC--EEEEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred CCCcCHHHHHHHHHHhC------CCchheEEEeC-ChHHHHHH-HHHCCC--EEEEEcCCCCCCcccCCCCeeECCHHHH
Confidence 45567999999999999 67899999999 97 99999 766532 24555321 12899999999
Q ss_pred HHHHHHH
Q 003029 835 RFLSQNY 841 (856)
Q Consensus 835 ~~~l~~~ 841 (856)
..+|+++
T Consensus 223 ~~~l~~~ 229 (230)
T 3vay_A 223 PEVLARW 229 (230)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9888754
No 104
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=97.92 E-value=0.0003 Score=77.90 Aligned_cols=146 Identities=13% Similarity=0.034 Sum_probs=86.5
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
.+++..|++...+.-..+++|++.+... .++.++.+++. ..++.+.+... ..+. ++.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGR-----QHAEITAERYR----TVAV--------EADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCT-----TTHHHHHHHHH----HTTC--------CCEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCc-----cccccccceec----cccc--------cccc
Confidence 3455567877766666666776655322 12334444322 12233333332 2221 1222
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCch--------hhc-c-CCeEEECCC-
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--------QSL-G-AGAILVNPW- 512 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~--------~~l-g-~~g~lVnP~- 512 (856)
.+++ +++..+|+.||++|.-| | +.++.|+++|+ .|.|+..+.++. +.+ . ..|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 3444 46899999999998644 5 67888999994 788887665442 223 2 247888655
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 513 -NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 513 -d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
+++.++++|.++|++++ .+++|.+++++..
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLA 339 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcC
Confidence 58999999999999874 5566666665543
No 105
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=5.9e-06 Score=83.47 Aligned_cols=62 Identities=15% Similarity=0.007 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeC------CC-------C-ccccCCH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLD------SS-------F-LHYLRMK 831 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~------~~-------~-~~~l~~~ 831 (856)
-.|+.+++.+++++| ++++++++||| +. ||++| .+.++- .+|.|. +. . .|.+.+.
T Consensus 157 kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~~Di~~-a~~aG~--~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l 226 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQ------IAPSELLMVGN-SFKSDIQP-VLSLGG--YGVHIPFEVMWKHEVTETFAHERLKQVKRL 226 (234)
T ss_dssp CCSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHH-HHHHTC--EEEECCCCTTCCCC---CCCCTTEEECSSG
T ss_pred CCCHHHHHHHHHHhC------CCcceEEEECC-CcHHHhHH-HHHCCC--eEEEecCCcccccCCcccccCCCceecccH
Confidence 369999999999999 67899999999 96 99999 776642 244441 11 1 2667787
Q ss_pred HHHHHHH
Q 003029 832 MCMRFLS 838 (856)
Q Consensus 832 ~~~~~~l 838 (856)
.++..+|
T Consensus 227 ~el~~~l 233 (234)
T 3ddh_A 227 DDLLSLL 233 (234)
T ss_dssp GGHHHHC
T ss_pred HHHHHhc
Confidence 7776654
No 106
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.90 E-value=1.5e-06 Score=89.32 Aligned_cols=72 Identities=7% Similarity=-0.180 Sum_probs=58.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..
T Consensus 162 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~-a~~aG~--~~i~v~~~~~~~~~l~~~~ad~v~~~~~ 231 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGG------FKPNEALVIEN-APLGVQA-GVAAGI--FTIAVNTGPLHDNVLLNEGANLLFHSMP 231 (247)
T ss_dssp SSCTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHH-HHHTTS--EEEEECCSSSCHHHHHTTTCSEEESSHH
T ss_pred CCCCCCCHHHHHHHHHcC------CChhheEEEeC-CHHHHHH-HHHCCC--eEEEEcCCCCCHHHHHhcCCCEEECCHH
Confidence 567788999999999999 67899999999 9999999 776642 35666542 228899999
Q ss_pred HHHHHHHHHHHHH
Q 003029 833 CMRFLSQNYLMMA 845 (856)
Q Consensus 833 ~~~~~l~~~~~~~ 845 (856)
++..+|++++.+.
T Consensus 232 el~~~l~~~~~~~ 244 (247)
T 3dv9_A 232 DFNKNWETLQSAL 244 (247)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987643
No 107
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.88 E-value=8.7e-07 Score=90.05 Aligned_cols=64 Identities=8% Similarity=-0.010 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcce-EEe--CCC-------CccccCCHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTIST-VRL--DSS-------FLHYLRMKMCMR 835 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~-v~V--~~~-------~~~~l~~~~~~~ 835 (856)
-.|..++..+++++| ++++++++||| +. ||++| .+.+ |+. +.| ++. +.|.+.+..++.
T Consensus 158 kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~nDi~~-a~~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 226 (235)
T 2om6_A 158 KPRKEMFEKVLNSFE------VKPEESLHIGD-TYAEDYQG-ARKV---GMWAVWINQEGDKVRKLEERGFEIPSIANLK 226 (235)
T ss_dssp TTCHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHH-HHHT---TSEEEEECTTCCSCEEEETTEEEESSGGGHH
T ss_pred CCCHHHHHHHHHHcC------CCccceEEECC-ChHHHHHH-HHHC---CCEEEEECCCCCCcccCCCCcchHhhHHHHH
Confidence 357899999999999 67899999999 98 99999 7765 333 333 321 127889999998
Q ss_pred HHHHHH
Q 003029 836 FLSQNY 841 (856)
Q Consensus 836 ~~l~~~ 841 (856)
.+|+++
T Consensus 227 ~~l~~~ 232 (235)
T 2om6_A 227 DVIELI 232 (235)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888765
No 108
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=97.88 E-value=3.3e-06 Score=87.15 Aligned_cols=69 Identities=4% Similarity=-0.205 Sum_probs=53.3
Q ss_pred EEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC---------------CCCc
Q 003029 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD---------------SSFL 825 (856)
Q Consensus 761 EV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~---------------~~~~ 825 (856)
|..+.+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .++.|. ...+
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~g~~~~~~l~~~~~a 236 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLD------LPPQEVMLCAA-HNYDLKA-ARALGL--KTAFIARPLEYGPGQSQDLAAEQDW 236 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHTTC--EEEEECCTTTTCTTCCSSSSCSSCC
T ss_pred cccccCCCCHHHHHHHHHHcC------CChHHEEEEcC-chHhHHH-HHHCCC--eEEEEecCCccCCCCCcccccCCCC
Confidence 445678899999999999999 67899999999 9999999 776642 234443 0112
Q ss_pred -cccCCHHHHHHHHH
Q 003029 826 -HYLRMKMCMRFLSQ 839 (856)
Q Consensus 826 -~~l~~~~~~~~~l~ 839 (856)
|.+.+..++..+|.
T Consensus 237 d~v~~~l~el~~~l~ 251 (254)
T 3umc_A 237 DLIASDLLDLHRQLA 251 (254)
T ss_dssp SEEESSHHHHHHHHH
T ss_pred cEEECCHHHHHHHhc
Confidence 78888888887764
No 109
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=97.84 E-value=6.7e-05 Score=84.34 Aligned_cols=103 Identities=13% Similarity=-0.032 Sum_probs=72.8
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
|.+ .+++++. .+|+.||+||..| |. .+.+|||+|+ .|+|++...| .++.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 352 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA----TPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-C
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC----CCEEECCCccchHHHHHHHHHcCCEEEcCCCCC
Confidence 554 6788865 6899999999865 33 6899999994 8899887755 23334 3468899877
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (856)
|+++++++|.++|+++ +.++++.+..++....+++...++.+.
T Consensus 353 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 353 TADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp CHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 8999999999999854 355554455555555555555555443
No 110
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=97.81 E-value=4.3e-06 Score=85.53 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=41.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
..|++++|+||||+....-. . ......+.+.+.++|++|.+ .|..++|+|+++..
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~----~--~~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~~ 84 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP----S--DPAEIVLRPQMLPAIATANR-AGIPVVVVTNQSGI 84 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT----T--CGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHHH
T ss_pred cCCEEEEeCCCCcCCCCccc----C--CcccCeECcCHHHHHHHHHH-CCCEEEEEcCcCCC
Confidence 47899999999999762111 0 01235678899999999986 69999999999764
No 111
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.80 E-value=1.9e-06 Score=88.85 Aligned_cols=68 Identities=7% Similarity=-0.150 Sum_probs=55.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..
T Consensus 163 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~-a~~aG~--~~i~v~~~~~~~~~l~~~~ad~v~~s~~ 232 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGG------LKADEAVVIEN-APLGVEA-GHKAGI--FTIAVNTGPLDGQVLLDAGADLLFPSMQ 232 (243)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCGGGEEEEEC-SHHHHHH-HHHTTC--EEEEECCSSSCHHHHHHTTCSEEESCHH
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHH-HHHCCC--EEEEEeCCCCCHHHHHhcCCCEEECCHH
Confidence 456788999999999999 67899999999 9999999 776632 25666432 228899999
Q ss_pred HHHHHHHHH
Q 003029 833 CMRFLSQNY 841 (856)
Q Consensus 833 ~~~~~l~~~ 841 (856)
++..+|+++
T Consensus 233 el~~~l~~l 241 (243)
T 3qxg_A 233 TLCDSWDTI 241 (243)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999887
No 112
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.75 E-value=8.6e-07 Score=93.96 Aligned_cols=68 Identities=15% Similarity=0.022 Sum_probs=51.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCc-ceEEEEecCCcccccccccccccCcceEEeCCC----------Cc-cccCCH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FL-HYLRMK 831 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~-d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~-~~l~~~ 831 (856)
..+-.|+.+++++++++| +++ +.+++||| +.||+.| .+.++ .+..+.+... .+ |.+.+.
T Consensus 201 ~~~Kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~-a~~aG-~~~~~~~~~~~~~~~~~~~~~ad~vi~sl 271 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKESG------LARYENAYFIDD-SGKNIET-GIKLG-MKTCIHLVENEVNEILGQTPEGAIVISDI 271 (282)
T ss_dssp CCCTTSHHHHHHHHHHHT------CCCGGGEEEEES-CHHHHHH-HHHHT-CSEEEEECSCCC----CCCCTTCEEESSG
T ss_pred cCCCcCHHHHHHHHHHcC------CCCcccEEEEcC-CHHHHHH-HHHCC-CeEEEEEcCCccccccccCCCCCEEeCCH
Confidence 445689999999999999 667 99999999 9999999 77663 3334455332 12 778888
Q ss_pred HHHHHHHHH
Q 003029 832 MCMRFLSQN 840 (856)
Q Consensus 832 ~~~~~~l~~ 840 (856)
.++..+|.+
T Consensus 272 ~el~~~l~~ 280 (282)
T 3nuq_A 272 LELPHVVSD 280 (282)
T ss_dssp GGGGGTSGG
T ss_pred HHHHHHhhh
Confidence 887776654
No 113
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.75 E-value=4.4e-05 Score=75.83 Aligned_cols=61 Identities=8% Similarity=-0.148 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--------CccccCCHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--------FLHYLRMKMCMRF 836 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--------~~~~l~~~~~~~~ 836 (856)
+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..++..
T Consensus 144 ~kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 144 SKPNPEIYLTALKQLN------VQASRALIIED-SEKGIAA-GVAADV--EVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp CTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHH-HHHTTC--EEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred CCCChHHHHHHHHHcC------CChHHeEEEec-cHhhHHH-HHHCCC--EEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 3457888999999999 67899999999 9999999 766642 35555432 1277777666544
No 114
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=97.75 E-value=9.1e-05 Score=77.61 Aligned_cols=57 Identities=7% Similarity=-0.004 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-ccc--CCHHHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYL--RMKMCMRFLS 838 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l--~~~~~~~~~l 838 (856)
+|+.+++.+.+.+ .+++||| +.||.+| ++.+ +++|.+++.. + +-+ .+..++.++|
T Consensus 194 ~k~~~~k~~~~~~-----------~~~~vGD-~~nDi~~-~~~A---g~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 194 EKAEKVKEVQQKY-----------VTAMVGD-GVNDAPA-LAQA---DVGIAIGAGTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp GHHHHHHHHHTTS-----------CEEEEEC-TTTTHHH-HHHS---SEEEECSCCSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred HHHHHHHHHHhcC-----------CEEEEeC-CchhHHH-HHhC---CceEEecCCcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 4888888776542 5799999 9999999 7766 4677776631 2 444 8888888877
Q ss_pred HH
Q 003029 839 QN 840 (856)
Q Consensus 839 ~~ 840 (856)
+.
T Consensus 258 ~~ 259 (280)
T 3skx_A 258 EL 259 (280)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 115
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.73 E-value=0.00026 Score=72.04 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHhC---cCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIV---HSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~---~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..|..+++.++++++ . +++.+++||| +.||.+| ++.+ +..|.|.++
T Consensus 158 ~~K~~~~~~~~~~~~~~~~------~~~~~~~vGD-s~~D~~~-~~~a---g~~~~~~~~ 206 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALG------DFAESYFYSD-SVNDVPL-LEAV---TRPIAANPS 206 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGG------GSSEEEEEEC-CGGGHHH-HHHS---SEEEEESCC
T ss_pred hHHHHHHHHHHHHcCCCcC------chhheEEEeC-CHhhHHH-HHhC---CCeEEECcC
Confidence 356777777777766 3 4789999999 9999999 7665 566777554
No 116
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.69 E-value=0.00012 Score=71.36 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=84.4
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003029 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (856)
Q Consensus 362 ~~~iIl~V~Rld---~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (856)
...+++++|++. +.|++..+++|+..+ + + .++.++++.. .+ .+ .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~---~~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNK---PD-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSC---CT-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcC---cc-------------cC----C----
Confidence 356888999995 777888888887542 2 2 2444443221 00 01 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC
Q 003029 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW 512 (856)
Q Consensus 439 ~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~ 512 (856)
..|. +.+++++.++.++ ..||++|.. |-+.++.|||+|+ .|+|+....+ .++.+ ...|+++++.
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G----~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHG----IPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcC----CCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 1355 4788998776654 999999974 3358999999994 8888887742 23334 2468888876
Q ss_pred --CHHHHHHHHHHHHcCC
Q 003029 513 --NITEVANAIARALNMS 528 (856)
Q Consensus 513 --d~~~lA~ai~~aL~~~ 528 (856)
+.++++++|.++|+++
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999754
No 117
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=97.67 E-value=3.4e-05 Score=77.46 Aligned_cols=37 Identities=3% Similarity=-0.215 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM 812 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~ 812 (856)
.|+.+++++++++| ++++++++||| +.||++| ++.++
T Consensus 151 p~~~~~~~~~~~~~------i~~~~~i~iGD-~~nDi~~-a~~aG 187 (226)
T 1te2_A 151 PHPQVYLDCAAKLG------VDPLTCVALED-SVNGMIA-SKAAR 187 (226)
T ss_dssp TSTHHHHHHHHHHT------SCGGGEEEEES-SHHHHHH-HHHTT
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHH-HHHcC
Confidence 44999999999999 67899999999 9999999 77663
No 118
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.60 E-value=6.8e-06 Score=82.63 Aligned_cols=67 Identities=6% Similarity=-0.037 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----CccccCCHHH--HHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----FLHYLRMKMC--MRFLSQ 839 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----~~~~l~~~~~--~~~~l~ 839 (856)
-.|+.+++.+++++| ++++++++||| +.||++| ++.++- ..+.+... +.|.+.+..+ +..+++
T Consensus 145 Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~nDi~~-a~~aG~--~~~~~~~~~~~~~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 145 KPAPDIFIAAAHAVG------VAPSESIGLED-SQAGIQA-IKDSGA--LPIGVGRPEDLGDDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp TTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEESCHHHHCSSSEEESSGGGCCHHHHHH
T ss_pred CCChHHHHHHHHHcC------CChhHeEEEeC-CHHHHHH-HHHCCC--EEEEECCHHHhccccchhcCHHhCCHHHHHH
Confidence 345569999999999 67899999999 9999999 776632 12333321 2266677666 355555
Q ss_pred HHHH
Q 003029 840 NYLM 843 (856)
Q Consensus 840 ~~~~ 843 (856)
.++.
T Consensus 215 ~~~~ 218 (221)
T 2wf7_A 215 VWLQ 218 (221)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 5553
No 119
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.53 E-value=6.2e-05 Score=76.57 Aligned_cols=70 Identities=6% Similarity=-0.112 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCM 834 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~ 834 (856)
.+-.|..+++.+++++| ++++++++||| +.||+.| .+.++- .++.|... +.|.+.+..++
T Consensus 149 ~~Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el 218 (232)
T 1zrn_A 149 VYKPDNRVYELAEQALG------LDRSAILFVAS-NAWDATG-ARYFGF--PTCWINRTGNVFEEMGQTPDWEVTSLRAV 218 (232)
T ss_dssp CCTTSHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHH-HHHHTC--CEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHH-HHHcCC--EEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence 45567889999999999 67899999999 9999999 776642 23444221 12788999999
Q ss_pred HHHHHHHHHH
Q 003029 835 RFLSQNYLMM 844 (856)
Q Consensus 835 ~~~l~~~~~~ 844 (856)
..+|+++...
T Consensus 219 ~~~l~~~~~~ 228 (232)
T 1zrn_A 219 VELFETAAGK 228 (232)
T ss_dssp HTTC------
T ss_pred HHHHHhhccc
Confidence 8888776543
No 120
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.52 E-value=0.00024 Score=73.60 Aligned_cols=70 Identities=10% Similarity=-0.109 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC----------------------
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---------------------- 822 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---------------------- 822 (856)
.+-.|..++..+++++| ++++++++||| +.||+.| .+.++- .++.|..
T Consensus 145 ~~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 214 (253)
T 1qq5_A 145 VFKPHPDSYALVEEVLG------VTPAEVLFVSS-NGFDVGG-AKNFGF--SVARVARLSQEALARELVSGTIAPLTMFK 214 (253)
T ss_dssp CCTTSHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHH-HHHHTC--EEEEECCSCHHHHHHHTTSSSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEEeC-ChhhHHH-HHHCCC--EEEEECCcccchhhhhccccccccccccc
Confidence 34567889999999999 67899999999 9999999 776642 2344433
Q ss_pred -----C------CccccCCHHHHHHHHHHHHHH
Q 003029 823 -----S------FLHYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 823 -----~------~~~~l~~~~~~~~~l~~~~~~ 844 (856)
. +.|.+.+..++..+|+++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 247 (253)
T 1qq5_A 215 ALRMREETYAEAPDFVVPALGDLPRLVRGMAGA 247 (253)
T ss_dssp HHHSSCCTTSCCCSEEESSGGGHHHHHHHHC--
T ss_pred ccccccCCCCCCCCeeeCCHHHHHHHHHHhccc
Confidence 1 228889999999999877543
No 121
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=97.50 E-value=0.0013 Score=72.53 Aligned_cols=137 Identities=10% Similarity=0.052 Sum_probs=87.3
Q ss_pred CceEEEeeccccc-------CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003029 363 RKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (856)
Q Consensus 363 ~~iIl~V~Rld~~-------KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (856)
..+++++|++... +.+..+++|++.+ + +.++.+++ .++.. ++.. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~----~~~~~~~g-----~~~~~----~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----D----VELIVAAP-----DTVAE----ALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----T----CEEEEECC-----HHHHH----HHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----C----cEEEEEeC-----CCCHH----hhCC----CCC----
Confidence 4588899999875 5677788887542 2 23444432 12221 2221 111
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEE
Q 003029 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILV 509 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lV 509 (856)
.|. + +++++. .+|..||+||..+ | ..+++|||+|+ .|+|+....+ .++.+ ...|+++
T Consensus 265 ----~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 265 ----QAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG----VPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ----TSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ----ceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC----CCEEEccCcccchHHHHHHHHCCCeEec
Confidence 244 4 777764 4679999999863 3 45789999994 8888887743 34434 2358888
Q ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 510 NPW--NITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 510 nP~--d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
++. +.++++++|.++|+++ +.++++++..+.+.
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD--TYARRAQDLSREIS 362 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHH
Confidence 875 7999999999999864 33344444444443
No 122
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.45 E-value=0.00038 Score=70.53 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC---------ccccCCHHHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---------LHYLRMKMCMRFLS 838 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---------~~~l~~~~~~~~~l 838 (856)
.|..++.++++++| . +.+++||| +.+|..| .+.+ +++|.++... .|.+.+..++..+|
T Consensus 157 ~Kp~~~~~~~~~~~------~--~~~~~vGD-s~~Di~~-a~~a---g~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 157 GKGKVIKLLKEKFH------F--KKIIMIGD-GATDMEA-CPPA---DAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHHHHHHHC------C--SCEEEEES-SHHHHTT-TTTS---SEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred chHHHHHHHHHHcC------C--CcEEEEeC-cHHhHHH-HHhC---CeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 58889999999987 3 68999999 9999998 5554 4577776431 26666666665544
No 123
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=97.41 E-value=5.2e-05 Score=79.70 Aligned_cols=67 Identities=7% Similarity=0.091 Sum_probs=50.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc---cCc-----
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE---YNL----- 662 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~---l~l----- 662 (856)
.|+|+||+||||++.. ..+ +.++++|++|.+ .|+.|+++|||+......+... +++
T Consensus 1 ik~i~~D~DGtL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~ 64 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRGN--------------RAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSS 64 (263)
T ss_dssp CEEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGG
T ss_pred CeEEEEeCcCceEeCC--------------EeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh
Confidence 4799999999999752 223 689999999986 6999999999997665554443 343
Q ss_pred eEEeeCceEEE
Q 003029 663 WLAAENGMFLR 673 (856)
Q Consensus 663 gliaenG~~i~ 673 (856)
++++.||+.+.
T Consensus 65 ~i~~~~~~~~~ 75 (263)
T 1zjj_A 65 IIITSGLATRL 75 (263)
T ss_dssp GEEEHHHHHHH
T ss_pred hEEecHHHHHH
Confidence 57888887653
No 124
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=97.40 E-value=9.2e-06 Score=85.94 Aligned_cols=41 Identities=5% Similarity=-0.177 Sum_probs=36.1
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCC-------CcceEEEEecCCcccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKT-------AIDYVLCIGHFLGKNCNLPLQFLM 812 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~-------~~d~vla~GD~~~nDe~M~f~~~~ 812 (856)
..+..|+.++..+++++| + +++++++||| +.||++| ++.++
T Consensus 167 ~~~kp~~~~~~~~~~~lg------i~~~~~~~~~~~~i~~GD-s~nDi~~-a~~AG 214 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLG------FPINEQDPSKSKVVVFED-APAGIAA-GKAAG 214 (275)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCCCSSCGGGSCEEEEES-SHHHHHH-HHHTT
T ss_pred CCCCCChHHHHHHHHHcC------CCccccCCCcceEEEEeC-CHHHHHH-HHHcC
Confidence 556789999999999999 5 6899999999 9999999 87764
No 125
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=97.40 E-value=5.9e-05 Score=79.65 Aligned_cols=72 Identities=14% Similarity=0.127 Sum_probs=47.0
Q ss_pred cCCeEEEEecCCccCCCCCCC-------CCCCcc----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH---hhHH
Q 003029 589 SNNRLLILGFNATLTEPVDTP-------GRRGDQ----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLD 654 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p-------~~~~~~----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~ 654 (856)
.++++|+||+||||++....- ...... .......+.|.++++|+.|.+ .|+.|+|+|||+. ..+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHHH
Confidence 457899999999999862000 000000 000014577899999999986 7999999999994 4455
Q ss_pred HHhcccC
Q 003029 655 KNFQEYN 661 (856)
Q Consensus 655 ~~~~~l~ 661 (856)
..+..++
T Consensus 136 ~~L~~~G 142 (258)
T 2i33_A 136 KNLERVG 142 (258)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 5555544
No 126
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.24 E-value=0.00096 Score=72.45 Aligned_cols=44 Identities=11% Similarity=0.196 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
.|..++..++++++ ++++.+++||| +.||+.| .+.+ +++|.++.
T Consensus 246 pkp~~~~~~~~~lg------v~~~~~i~VGD-s~~Di~a-a~~A---G~~va~~~ 289 (317)
T 4eze_A 246 NKKQTLVDLAARLN------IATENIIACGD-GANDLPM-LEHA---GTGIAWKA 289 (317)
T ss_dssp HHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEESC
T ss_pred CCHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHH-HHHC---CCeEEeCC
Confidence 57888999999998 67899999999 9999999 6655 56777743
No 127
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.19 E-value=0.00031 Score=70.71 Aligned_cols=65 Identities=9% Similarity=-0.112 Sum_probs=48.1
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--C---------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--S---------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--~---------~~~~l~~~~ 832 (856)
..+-.|..++.++++++| ++++++++||| +.||+.| .+.++-. +|.|.. . +.|.+.+..
T Consensus 134 ~~~Kp~p~~~~~~~~~lg------~~p~~~~~vgD-s~~Di~~-a~~aG~~--~i~v~~~~~~~~~l~~~~a~~v~~~~~ 203 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLG-ARETGIQ--KLAITWGFGEQADLLNYQPDYIAHKPL 203 (210)
T ss_dssp SSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTCE--EEEESSSSSCHHHHHTTCCSEEESSTT
T ss_pred CCCCCChHHHHHHHHHcC------CCcccEEEECC-CHHHHHH-HHHCCCc--EEEEcCCCCCHHHHHhCCCCEEECCHH
Confidence 556789999999999999 67899999999 9999999 7766432 445532 1 126677777
Q ss_pred HHHHHH
Q 003029 833 CMRFLS 838 (856)
Q Consensus 833 ~~~~~l 838 (856)
++..+|
T Consensus 204 el~~~l 209 (210)
T 2ah5_A 204 EVLAYF 209 (210)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 766543
No 128
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=97.11 E-value=0.0012 Score=70.25 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 580 ~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
......|.....++|++|+|+++..... ....+.|.+.++|+.|.+ .|+.++|+||++...+...+..
T Consensus 132 ~~~~~~~~~~g~~~i~~~~d~~~~~~~~-----------~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 199 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRE 199 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------eccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 3455667767789999999999875310 134577899999999986 6999999999999888887776
Q ss_pred cCc
Q 003029 660 YNL 662 (856)
Q Consensus 660 l~l 662 (856)
+++
T Consensus 200 ~gl 202 (287)
T 3a1c_A 200 LNL 202 (287)
T ss_dssp HTC
T ss_pred hCC
Confidence 553
No 129
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=97.09 E-value=0.0074 Score=65.59 Aligned_cols=67 Identities=9% Similarity=-0.021 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----Cc---cccCCHHHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----FL---HYLRMKMCMRFLS 838 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----~~---~~l~~~~~~~~~l 838 (856)
-.|+.++++++++++ ++++.+++||| +.||++| ++.+ +++|.+... .+ ....+-..+..+|
T Consensus 244 kpk~~~~~~~~~~lg------i~~~~~v~vGD-s~nDi~~-a~~a---G~~va~~~~~~~~~~a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 244 QTKADILLTLAQQYD------VEIHNTVAVGD-GANDLVM-MAAA---GLGVAYHAKPKVEAKAQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEESCCHHHHTTSSEEESSSCTHHHHHHH
T ss_pred hhhHHHHHHHHHHcC------CChhhEEEEeC-CHHHHHH-HHHC---CCeEEeCCCHHHHhhCCEEEecCCHHHHHHHH
Confidence 479999999999999 67899999999 9999999 7765 556666322 12 5667778888888
Q ss_pred HHHHHH
Q 003029 839 QNYLMM 844 (856)
Q Consensus 839 ~~~~~~ 844 (856)
+..+..
T Consensus 313 ~~~l~~ 318 (335)
T 3n28_A 313 SAALVA 318 (335)
T ss_dssp HHHHHH
T ss_pred HhHHHH
Confidence 877643
No 130
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=97.02 E-value=0.00028 Score=65.35 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=43.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.|+|+||+||||... ..+.|.+.++|++|.+ .|..++|+|+++...++..+..+
T Consensus 2 ~k~i~~D~DgtL~~~---------------~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 2 MRGLIVDYAGVLDGT---------------DEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp CCEEEECSTTTTSSC---------------HHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHHHH
T ss_pred CcEEEEeccceecCC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHC
Confidence 578999999999432 3466889999999986 69999999999887766655543
No 131
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.01 E-value=0.0045 Score=69.80 Aligned_cols=148 Identities=12% Similarity=0.008 Sum_probs=87.1
Q ss_pred CceEEEeeccccc-----CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 363 RKVMLGVDRLDMI-----KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 363 ~~iIl~V~Rld~~-----KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
..++++.|++... |.+..+++|+..+ + +.++.++++. +.. .+. . ..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~----~~~v~~~g~~-----~~~----~l~----~----~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----D----AEIIATFDAQ-----QLE----GVA----N----IP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----S----SEEEECCCTT-----TTS----SCS----S----CC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----C----CEEEEEECCc-----chh----hhc----c----CC---
Confidence 3578889999864 8888889888643 2 2344333211 100 000 0 00
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP 511 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP 511 (856)
..|. +.+++++.+ +|..||++|.. -| ..++.|+++|+ .|+|+..+.+ .++.+ ...|+++++
T Consensus 319 -~~v~-~~~~~~~~~---ll~~ad~~V~~---~G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMHA---LLPTCAATVHH---GG-PGSWHTAAIHG----VPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHHH---HGGGCSEEEEC---CC-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHHH---HHhhCCEEEEC---CC-HHHHHHHHHhC----CCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1355 478888754 57999999973 34 56899999994 8899887743 33334 246888887
Q ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 512 W--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 512 ~--d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
. ++++++++|.++|+++ +.+.++.+...+.........-++
T Consensus 386 ~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP-AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 5 8999999999999864 344333333333334444444333
No 132
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=96.92 E-value=0.00058 Score=72.28 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=47.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL 662 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l 662 (856)
.++|+|+||+||||++.. .+.+.+.++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 12 ~~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~lg~ 72 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHKLGL 72 (284)
T ss_dssp GGCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTC
T ss_pred hcCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHHCCc
Confidence 358999999999999762 245789999999986 7999999995 888888887777643
No 133
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=96.88 E-value=0.0016 Score=77.67 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=56.0
Q ss_pred hHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
.....+.+.....+.+++.+||+++.... ...++.+++.++|++|.+ .|++++++||++.........
T Consensus 425 ~~~~~~~~~~~g~~~l~va~~~~~~G~i~-----------~~D~l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~ 492 (645)
T 3j08_A 425 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 492 (645)
T ss_dssp HHHHHHHHHTTTCCCEEEEETTEEEEEEE-----------EECCCTTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEE-----------ecCCchhHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence 34445566667788899999999874321 234578899999999986 799999999999999888877
Q ss_pred ccCc
Q 003029 659 EYNL 662 (856)
Q Consensus 659 ~l~l 662 (856)
.+++
T Consensus 493 ~lgi 496 (645)
T 3j08_A 493 ELNL 496 (645)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
No 134
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.87 E-value=0.0015 Score=73.52 Aligned_cols=45 Identities=9% Similarity=0.158 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
-.|..+++.+++++| ++++.+++||| +.||+.| .+.+ +++|.+..
T Consensus 322 kpk~~~~~~~~~~~g------i~~~~~i~vGD-~~~Di~~-a~~a---G~~va~~~ 366 (415)
T 3p96_A 322 AGKATALREFAQRAG------VPMAQTVAVGD-GANDIDM-LAAA---GLGIAFNA 366 (415)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEESC
T ss_pred cchHHHHHHHHHHcC------cChhhEEEEEC-CHHHHHH-HHHC---CCeEEECC
Confidence 368899999999999 67899999999 9999999 6655 56777743
No 135
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=96.86 E-value=0.0038 Score=68.80 Aligned_cols=106 Identities=16% Similarity=0.116 Sum_probs=68.7
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-----CCchhhc--cCCeEEECCC-
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSL--GAGAILVNPW- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-----aG~~~~l--g~~g~lVnP~- 512 (856)
|. +.+++++. .++..||++|..| |. .+.+|+++++ .|+|+.-. .+.+..+ ...|+.+++.
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAG----VPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTT----CCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred EE-EecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhC----CCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 55 46788776 8899999999776 32 5679999994 78885543 2344444 3458888876
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 513 -d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
++++++++|.++|+++ +.+.++.+...+....+.+..-++.+.+.+
T Consensus 351 ~~~~~l~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 LEPASIREAVERLAADS-AVRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp CSHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 8999999999999864 233333333333334444455554444333
No 136
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=96.77 E-value=0.001 Score=66.88 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=45.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+.+|+||||+||||++...... ...........+-|.+.++|+.|.+ .|..++|+||.+...+.+..
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~-~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRD-QGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHH-HTCCEEEECCSCHHHHHHHH
T ss_pred CcCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHH-CCCEEEEEcCChHHHHHHhc
Confidence 4578999999999997421110 0000001123567889999999986 69999999999887764433
No 137
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=96.69 E-value=0.0027 Score=62.96 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=48.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH---hhHHHHhcccCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYNL 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~~~~~~l~l 662 (856)
..|+|+||+||||+......-.......-....+.+.+.++|++|.+ .|..++|+|+.+. ..+...+..+++
T Consensus 2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~l~~~gl 76 (189)
T 3ib6_A 2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQ-LGFKQAILSNTATSDTEVIKRVLTNFGI 76 (189)
T ss_dssp -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHHTTC
T ss_pred CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHH-CCCEEEEEECCCccchHHHHHHHHhcCc
Confidence 46899999999998742210000000000134678899999999987 6999999999876 677777776653
No 138
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=96.61 E-value=0.015 Score=64.66 Aligned_cols=105 Identities=10% Similarity=-0.047 Sum_probs=68.0
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
|.+ .+++++. .++..||++|..+ |. .+..|+++++ .|+|+--..+ .+..+ ...|+.+++.
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG----RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC----CCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 554 6788865 7888999999775 33 4679999994 7888744332 34444 2357888775
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
++++++++|.++|+++ +.+..+.+...+......+...++.+.+.
T Consensus 367 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADP-ALLARVEAMRGHVRRAGGAARAADAVEAY 411 (415)
T ss_dssp CHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 8999999999999864 34433333333344445555555544433
No 139
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=96.61 E-value=0.0071 Score=67.02 Aligned_cols=150 Identities=9% Similarity=0.001 Sum_probs=88.2
Q ss_pred CCceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld~~-KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...+++++|++... |+...+..+++.+.+ . + +.+++++++. +.. .+. .+ ...
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~----~~~v~~~g~~--~~~-------~l~----~~--------~~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-D----ADFVLALGDL--DIS-------PLG----TL--------PRN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-S----SEEEEECTTS--CCG-------GGC----SC--------CTT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-C----CEEEEEECCc--Chh-------hhc----cC--------CCc
Confidence 35678889999655 355544444444432 2 2 3355555332 100 111 00 013
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEE----eCCCCch--hhc--cCCeEEECCC
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL----SEFAGAA--QSL--GAGAILVNPW 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVl----Se~aG~~--~~l--g~~g~lVnP~ 512 (856)
|.+ .++++.. .++..||+||.. |-..+..|||+|+ .|+|+ .+-.+.+ +.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G----~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRA-VGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAG----IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHT----CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEE-EccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhC----CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 554 6777654 567789999953 4446889999994 78888 5556666 666 3468888876
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003029 513 --NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (856)
Q Consensus 513 --d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (856)
+.+.++ ++|++ ++.|.++.+...+......+...++.+
T Consensus 353 ~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 353 KVDADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp GCCHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CCCHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 555555 77775 335555555555555666666655544
No 140
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=96.47 E-value=0.0095 Score=71.89 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=56.7
Q ss_pred hHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
.....+.+.....+.+++.+||+++.... ...++.+++.++|++|.+ .|+.++++||+..........
T Consensus 503 ~~~~~~~~~~~g~~~~~va~~~~~~G~i~-----------i~D~~~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~a~~ia~ 570 (723)
T 3j09_A 503 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 570 (723)
T ss_dssp HHHHHHHHHTTTCEEEEEEETTEEEEEEE-----------EECCSCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEe-----------ecCCcchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
Confidence 44455667777889999999999875321 234578899999999986 799999999999998888777
Q ss_pred ccCc
Q 003029 659 EYNL 662 (856)
Q Consensus 659 ~l~l 662 (856)
.+++
T Consensus 571 ~lgi 574 (723)
T 3j09_A 571 ELNL 574 (723)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
No 141
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=96.39 E-value=0.003 Score=76.21 Aligned_cols=71 Identities=8% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 580 ~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
....+.|.....+.+++.+||+++..-. ...++.++++++|++|.+ .|++|+++|||...........
T Consensus 523 ~~~~~~~~~~G~~vl~va~d~~~~G~i~-----------i~D~i~~~~~~aI~~L~~-~Gi~v~mlTGd~~~~a~~ia~~ 590 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAVDGKTVALLV-----------VEDPIKSSTPETILELQQ-SGIEIVMLTGDSKRTAEAVAGT 590 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCSSHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEE-----------eeccchhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHH
Confidence 3445667777899999999999875311 133578899999999986 6999999999999999888877
Q ss_pred cCc
Q 003029 660 YNL 662 (856)
Q Consensus 660 l~l 662 (856)
+++
T Consensus 591 lgi 593 (736)
T 3rfu_A 591 LGI 593 (736)
T ss_dssp HTC
T ss_pred cCC
Confidence 764
No 142
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=96.31 E-value=0.0014 Score=65.92 Aligned_cols=74 Identities=7% Similarity=-0.109 Sum_probs=56.0
Q ss_pred eCC--CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--C-------------Ccc
Q 003029 764 AVG--VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--S-------------FLH 826 (856)
Q Consensus 764 p~g--vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--~-------------~~~ 826 (856)
+.+ .+|+.+++++++++| ++++++++||| +.||++| ++.++- .+|.+.+ . +.|
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~~~~~~~~~~~~~~~l~~~~ad~ 207 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFG------VSPDRVVVVED-SVHGIHG-ARAAGM--RVIGFTGASHTYPSHADRLTDAGAET 207 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHTTC--EEEEECCSTTCCTTHHHHHHHHTCSE
T ss_pred ccCCCCcCHHHHHHHHHHcC------CChhHeEEEcC-CHHHHHH-HHHCCC--EEEEEecCCccchhhhHHHhhcCCce
Confidence 667 899999999999999 67899999999 9999999 776632 1366643 2 238
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 003029 827 YLRMKMCMRFLSQNYLMMARA 847 (856)
Q Consensus 827 ~l~~~~~~~~~l~~~~~~~~~ 847 (856)
.+.+..++..+|+++..-..|
T Consensus 208 v~~~~~el~~~l~~~~~~~~~ 228 (229)
T 2fdr_A 208 VISRMQDLPAVIAAMAEWEGA 228 (229)
T ss_dssp EESCGGGHHHHHHHHTC----
T ss_pred eecCHHHHHHHHHHhhhhhcc
Confidence 888999998888877443333
No 143
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=96.27 E-value=0.0043 Score=61.02 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=48.7
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC---------------CHh
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---------------DRN 651 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR---------------~~~ 651 (856)
..+..|+++||.||||+...... .. .......++.|.+.++|++|.+ .|..++|+|+. ...
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~--~~-~~~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~ 85 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSD--FQ-VDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQDGLGTQSFPQADFDGPHN 85 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--C--CC-CCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECTTTTBTTBCHHHHHHHHH
T ss_pred cCCcCcEEEEeCCCCeEcCCCCC--cC-cCCHHHCcCCccHHHHHHHHHH-CCCEEEEEECCccccccccchHhhhhhHH
Confidence 34789999999999999763100 00 0011245678899999999986 69999999998 455
Q ss_pred hHHHHhcccCc
Q 003029 652 VLDKNFQEYNL 662 (856)
Q Consensus 652 ~l~~~~~~l~l 662 (856)
.+...+..+++
T Consensus 86 ~~~~~l~~~gl 96 (176)
T 2fpr_A 86 LMMQIFTSQGV 96 (176)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 56666666554
No 144
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=96.16 E-value=0.0033 Score=69.78 Aligned_cols=81 Identities=20% Similarity=0.170 Sum_probs=57.1
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCCC-CCCCCccccccc--cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVDT-PGRRGDQIREME--LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~-p~~~~~~~~~~~--~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (856)
.+..+..+.+..++|+|++|+||||++-.-. -|...-.+.... ..+.+.+.+.|+.|.+ .|+.++|+|+++...++
T Consensus 209 ~~~~~~~~l~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~-~Gi~laI~Snn~~~~v~ 287 (387)
T 3nvb_A 209 RTIDIIAAIQGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKN-RGIIIAVCSKNNEGKAK 287 (387)
T ss_dssp HHHHHHHHHTTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHH-TTCEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHH
Confidence 3456777788889999999999999984200 000000000000 2345789999999997 79999999999999998
Q ss_pred HHhcc
Q 003029 655 KNFQE 659 (856)
Q Consensus 655 ~~~~~ 659 (856)
..++.
T Consensus 288 ~~l~~ 292 (387)
T 3nvb_A 288 EPFER 292 (387)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88866
No 145
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=95.90 E-value=0.0033 Score=65.09 Aligned_cols=71 Identities=10% Similarity=-0.093 Sum_probs=54.1
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCc-ceEEEEecCCcccccccccccccCcceEEeCCC------------------
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------------------ 823 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~-d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------------------ 823 (856)
.+.+.+|+.++..+++++| +++ +++++||| +.||++| ++.++-..+.|.-++.
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~iGD-~~nDi~~-a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELG------VYPMNHMIKVGD-TVSDMKE-GRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 227 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHT------CCSGGGEEEEES-SHHHHHH-HHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHH
T ss_pred cCCCCCCHHHHHHHHHHhC------CCCCcCEEEEeC-CHHHHHH-HHHCCCEEEEEcCCCCccCccHHHHhhchhhhhh
Confidence 3567889999999999999 567 89999999 9999999 8877532233332322
Q ss_pred --------------CccccCCHHHHHHHHHHH
Q 003029 824 --------------FLHYLRMKMCMRFLSQNY 841 (856)
Q Consensus 824 --------------~~~~l~~~~~~~~~l~~~ 841 (856)
+.|.+.+..++..+|+.+
T Consensus 228 ~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 259 (267)
T 1swv_A 228 EKIEVVRNRFVENGAHFTIETMQELESVMEHI 259 (267)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred hhhhhHHHHHHhcCCceeccCHHHHHHHHHHH
Confidence 227888999988888665
No 146
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=95.89 E-value=0.0021 Score=65.42 Aligned_cols=60 Identities=8% Similarity=-0.004 Sum_probs=36.3
Q ss_pred CCeEEEEecCCccCCCCCCC--------CCCCccc-c-----------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 590 NNRLLILGFNATLTEPVDTP--------GRRGDQI-R-----------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p--------~~~~~~~-~-----------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
..|+|+||+||||++..... ....... . .....+.+.+.+.|+.|.+ .|+.++|+|+++
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~-~G~~l~ivTn~~ 114 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR-RGDAIFFVTGRS 114 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-HTCEEEEEECSC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-CCCEEEEEcCCc
Confidence 57999999999999852100 0000000 0 0001234577888888875 588888888886
Q ss_pred H
Q 003029 650 R 650 (856)
Q Consensus 650 ~ 650 (856)
.
T Consensus 115 ~ 115 (211)
T 2b82_A 115 P 115 (211)
T ss_dssp C
T ss_pred H
Confidence 4
No 147
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=95.88 E-value=0.27 Score=54.57 Aligned_cols=136 Identities=11% Similarity=0.042 Sum_probs=81.8
Q ss_pred CCceEEEeeccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld-~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...|+++.|++. +.+.+...++|++.+ +++ ++.++++.... ..+ . ...
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~----------------~~~----~--~~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG----------------RID----E--GDD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC----------------CSS----C--CTT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc----------------ccc----C--CCC
Confidence 456778899998 666677777777653 222 33333221100 000 0 113
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc----hhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~----~~~l--g~~g~lVnP~-- 512 (856)
|.+ .+++++.+ ++..||++|..+ |. .+..|+++++ .|+|+--+.|- +..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~G----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAG----APQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcC----CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 554 57888755 557899999655 33 5678999994 78887765442 1112 1347777653
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
+.++++++|.++|+ + +.++++++..+.+
T Consensus 338 ~~~~l~~ai~~ll~--~-~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 338 TVESLSAALATALT--P-GIRARAAAVAGTI 365 (404)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHH
Confidence 78999999999997 3 3344444443333
No 148
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.86 E-value=0.003 Score=66.32 Aligned_cols=73 Identities=7% Similarity=0.081 Sum_probs=49.0
Q ss_pred cCCeEEEEecCCccCCCCCCC-------CCCCc-----cccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh----h
Q 003029 589 SNNRLLILGFNATLTEPVDTP-------GRRGD-----QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN----V 652 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p-------~~~~~-----~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~----~ 652 (856)
.++.+|+||+||||++....- ..+.. -.......+-|.+++.|+.|.+ .|+.|+|+|||+.. .
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHH
Confidence 455799999999999873100 00000 0011234567789999999986 69999999999754 6
Q ss_pred HHHHhcccCc
Q 003029 653 LDKNFQEYNL 662 (856)
Q Consensus 653 l~~~~~~l~l 662 (856)
...++..+++
T Consensus 135 T~~~L~~lGi 144 (260)
T 3pct_A 135 TVDDMKRLGF 144 (260)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCc
Confidence 6777777654
No 149
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=95.62 E-value=0.0045 Score=65.13 Aligned_cols=73 Identities=5% Similarity=0.064 Sum_probs=49.8
Q ss_pred cCCeEEEEecCCccCCCCCC-------CCCCCc-----cccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH----hh
Q 003029 589 SNNRLLILGFNATLTEPVDT-------PGRRGD-----QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----NV 652 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~-------p~~~~~-----~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~----~~ 652 (856)
.++.+|+||+||||++...- ...+.. -.......+-|.+++.|+.|.+ .|+.|+|+|||+. ..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHHH
Confidence 45679999999999987410 000000 0011234566789999999986 6999999999976 46
Q ss_pred HHHHhcccCc
Q 003029 653 LDKNFQEYNL 662 (856)
Q Consensus 653 l~~~~~~l~l 662 (856)
...++..+++
T Consensus 135 T~~~L~~lGi 144 (262)
T 3ocu_A 135 TIDDMKRLGF 144 (262)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCc
Confidence 6677777664
No 150
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.53 E-value=0.3 Score=58.85 Aligned_cols=173 Identities=14% Similarity=0.107 Sum_probs=110.8
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
.++.+.-++ .|=-+..+..+.++|++.|+-+ |++...+. ..-..+ .+.+.+ +|- +-..|+|
T Consensus 524 v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l----~~~~~~----~gi-~~~r~~f 584 (723)
T 4gyw_A 524 IVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNI----QQYAQN----MGL-PQNRIIF 584 (723)
T ss_dssp EEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHH----HHHHHH----TTC-CGGGEEE
T ss_pred EEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHH----HHHHHh----cCC-CcCeEEE
Confidence 334445454 4557899999999999999854 66665432 111223 333332 232 1124665
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-chh-----hc---cCCeEEECCCCH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ-----SL---GAGAILVNPWNI 514 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-~~~-----~l---g~~g~lVnP~d~ 514 (856)
.+..+.++..+.|+.+||+|-|--+-| +.+..||+.+ |++|+|--+. .+. .+ |-.-++ -.|.
T Consensus 585 -~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a~~~ 655 (723)
T 4gyw_A 585 -SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELI--AKNR 655 (723)
T ss_dssp -EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--CSSH
T ss_pred -CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCcccc--cCCH
Confidence 667899999999999999999999877 7889999999 5666663321 111 11 222222 2567
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHhHHh
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~~~~ 565 (856)
++..+.-.++-+++ +.+....+++++...+ +|...|++.|-..+.+.+..
T Consensus 656 ~~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 656 QEYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 77666656665654 3555555556665544 68899999998888887754
No 151
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=95.31 E-value=0.0061 Score=60.49 Aligned_cols=31 Identities=6% Similarity=0.058 Sum_probs=20.7
Q ss_pred CCChhHHHHHHHhhcCC-CCeEEEEcCCCHhhH
Q 003029 622 KLHPDLKQPLNALCHDP-KTTIVVLSGSDRNVL 653 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~-g~~V~I~SGR~~~~l 653 (856)
.+.|.+.++|++|.+ . |..++|+|+++...+
T Consensus 73 ~~~~g~~e~L~~L~~-~~g~~~~ivT~~~~~~~ 104 (193)
T 2i7d_A 73 EPIPGALDAVREMND-LPDTQVFICTSPLLKYH 104 (193)
T ss_dssp CBCTTHHHHHHHHHT-STTEEEEEEECCCSSCT
T ss_pred ccCcCHHHHHHHHHh-CCCCeEEEEeCCChhhH
Confidence 455677777777764 4 677777777765433
No 152
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=95.26 E-value=0.0056 Score=60.35 Aligned_cols=69 Identities=9% Similarity=-0.077 Sum_probs=54.5
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE--EeCCC---------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV--RLDSS---------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v--~V~~~---------~~~~l~~~~ 832 (856)
..+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+| .|... +.|.+.+..
T Consensus 137 ~~~kp~~~~~~~~~~~~~------~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~~~v~~~~~~~~~~~~a~~~~~~~~ 206 (216)
T 2pib_A 137 KNGKPDPEIYLLVLERLN------VVPEKVVVFED-SKSGVEA-AKSAGI--ERIYGVVHSLNDGKALLEAGAVALVKPE 206 (216)
T ss_dssp SSCTTSTHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHH-HHHTTC--CEEEEECCSSSCCHHHHHTTCSEEECGG
T ss_pred CCCCcCcHHHHHHHHHcC------CCCceEEEEeC-cHHHHHH-HHHcCC--cEEehccCCCCCchhhcchhheeeCCHH
Confidence 456678999999999999 67899999999 9999999 776642 244 55332 238899999
Q ss_pred HHHHHHHHHH
Q 003029 833 CMRFLSQNYL 842 (856)
Q Consensus 833 ~~~~~l~~~~ 842 (856)
++..+|++++
T Consensus 207 el~~~l~~ll 216 (216)
T 2pib_A 207 EILNVLKEVL 216 (216)
T ss_dssp GHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999998864
No 153
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=95.20 E-value=0.11 Score=57.94 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=77.9
Q ss_pred CCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rl-d~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...++++.|++ ++.|.+..+++|++.+ + .+ ++.+.++. + .+ . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~-------~----~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV-------L----PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC-------C----SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc-------c----cCCC--------CC
Confidence 35688889999 6888888888888754 2 22 33332211 1 00 0 0000 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
+. +.+++++.++ +..||+||..+ |. .++.||++++ .|+|+....+ .+..+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~~---l~~~d~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQVL---FGRVAAVIHHG---GA-GTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHHH---GGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHHH---HhhCCEEEeCC---Ch-hHHHHHHHcC----CCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 54 4788988654 69999999753 44 6899999994 7888876654 33333 2357888764
Q ss_pred CHHHHHHHHHHHHcC
Q 003029 513 NITEVANAIARALNM 527 (856)
Q Consensus 513 d~~~lA~ai~~aL~~ 527 (856)
+.++++++|.++ ++
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 889999999999 65
No 154
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=95.09 E-value=0.012 Score=60.91 Aligned_cols=72 Identities=7% Similarity=-0.164 Sum_probs=57.3
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCc-ceEEEEecCCcccccccccccccCcceEEeCCC------------------
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------------------ 823 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~-d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------------------ 823 (856)
.+.+..|+.+++.+++++| +++ +++++||| +.||++| .+.++-. +|.|...
T Consensus 164 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~-a~~aG~~--~v~v~~g~~~~~~~~~~~~~~~~~~ 233 (277)
T 3iru_A 164 VVRGRPFPDMALKVALELE------VGHVNGCIKVDD-TLPGIEE-GLRAGMW--TVGVSCSGNEVGLDREDWQALSSDE 233 (277)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CSCGGGEEEEES-SHHHHHH-HHHTTCE--EEEECSSSTTTCCCHHHHHHSCHHH
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCccEEEEcC-CHHHHHH-HHHCCCe--EEEEecCCcccccchhhhhhcchhh
Confidence 4667889999999999999 678 99999999 9999999 7776432 4455322
Q ss_pred ----------------CccccCCHHHHHHHHHHHHHH
Q 003029 824 ----------------FLHYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 824 ----------------~~~~l~~~~~~~~~l~~~~~~ 844 (856)
+.|-+.+..++..+|+++-..
T Consensus 234 ~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~ 270 (277)
T 3iru_A 234 QQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNRR 270 (277)
T ss_dssp HHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHHH
T ss_pred hhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHHH
Confidence 238899999999999887653
No 155
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=95.04 E-value=0.06 Score=67.54 Aligned_cols=40 Identities=3% Similarity=-0.021 Sum_probs=35.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.++.++++++|++|.+ .|+.|+++|||...........++
T Consensus 603 Dp~r~~~~~aI~~l~~-aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRT-AGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred CCCchhHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcC
Confidence 3578899999999986 799999999999999988887765
No 156
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=94.90 E-value=0.015 Score=65.46 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=39.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
...|+++||+||||+...... ..... ...-..+.+.+.++|+.|.+ .|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~-~~~~~-~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK-VFPTS-PSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS-SSCSS-TTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCc-cCCCC-HHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 357899999999998652100 00000 00112367899999999986 699999999976
No 157
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=94.85 E-value=0.013 Score=59.40 Aligned_cols=68 Identities=6% Similarity=-0.231 Sum_probs=52.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC---------------C-Cccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---------------S-FLHY 827 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---------------~-~~~~ 827 (856)
..+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- -++.|.. . +.|.
T Consensus 166 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 235 (254)
T 3umg_A 166 RKYKPDPQAYLRTAQVLG------LHPGEVMLAAA-HNGDLEA-AHATGL--ATAFILRPVEHGPHQTDDLAPTGSWDIS 235 (254)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CHHHHHH-HHHTTC--EEEEECCTTTTCTTCCSCSSCSSCCSEE
T ss_pred CCCCCCHHHHHHHHHHcC------CChHHEEEEeC-ChHhHHH-HHHCCC--EEEEEecCCcCCCCccccccccCCCceE
Confidence 456678999999999999 67899999999 9999999 776642 2344431 1 1288
Q ss_pred cCCHHHHHHHHHHH
Q 003029 828 LRMKMCMRFLSQNY 841 (856)
Q Consensus 828 l~~~~~~~~~l~~~ 841 (856)
+.+..++..+|...
T Consensus 236 ~~~~~el~~~l~~~ 249 (254)
T 3umg_A 236 ATDITDLAAQLRAG 249 (254)
T ss_dssp ESSHHHHHHHHHHC
T ss_pred ECCHHHHHHHhcCC
Confidence 89999988887653
No 158
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=94.79 E-value=0.034 Score=55.56 Aligned_cols=66 Identities=3% Similarity=-0.127 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMRF 836 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~~ 836 (856)
-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .++.|... +.|.+.+..++..
T Consensus 152 kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (230)
T 3um9_A 152 KPHQKVYELAMDTLH------LGESEILFVSC-NSWDATG-AKYFGY--PVCWINRSNGVFDQLGVVPDIVVSDVGVLAS 221 (230)
T ss_dssp TTCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHHTC--CEEEECTTSCCCCCSSCCCSEEESSHHHHHH
T ss_pred CCChHHHHHHHHHhC------CCcccEEEEeC-CHHHHHH-HHHCCC--EEEEEeCCCCccccccCCCcEEeCCHHHHHH
Confidence 356788899999999 67899999999 9999999 776642 24444211 1288999998888
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
+|+++-
T Consensus 222 ~l~~~~ 227 (230)
T 3um9_A 222 RFSPVD 227 (230)
T ss_dssp TCCC--
T ss_pred HHHHhh
Confidence 776553
No 159
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=94.68 E-value=0.012 Score=57.27 Aligned_cols=63 Identities=16% Similarity=0.027 Sum_probs=49.1
Q ss_pred CCCH--HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC--Cc-cccCCHHHHHHHHH
Q 003029 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS--FL-HYLRMKMCMRFLSQ 839 (856)
Q Consensus 766 gvnK--G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~--~~-~~l~~~~~~~~~l~ 839 (856)
+..| ..+++.+++++| ++++.+++||| +.||++| ++.+ |+ +|.|++. .+ |.+.+..++..+|+
T Consensus 137 ~~~Kp~~~~~~~~~~~~~------i~~~~~~~iGD-~~nDi~~-~~~a---G~~~i~~~~~~~~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEF-AQNS---GIQSINFLESTYEGNHRIQALADISRIFE 205 (207)
T ss_dssp CCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHH---TCEEEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred CCCCCCcHHHHHHHHHhC------CCcccEEEECC-CHHHHHH-HHHC---CCeEEEEecCCCCCCEEeCCHHHHHHHHh
Confidence 3455 899999999999 67899999999 9999999 7766 44 4677653 23 88888888776653
No 160
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=94.51 E-value=0.054 Score=53.11 Aligned_cols=41 Identities=12% Similarity=0.289 Sum_probs=34.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
..+.+.+.+.|+.|.+ .|..++|+|+.+...++..+..+++
T Consensus 83 ~~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~~ 123 (216)
T 2pib_A 83 LKENPGVREALEFVKS-KRIKLALATSTPQREALERLRRLDL 123 (216)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCcCcCHHHHHHHHHH-CCCCEEEEeCCcHHhHHHHHHhcCh
Confidence 4566788899999986 6899999999999988888887653
No 161
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=94.51 E-value=0.031 Score=56.07 Aligned_cols=63 Identities=10% Similarity=-0.114 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC---CC-------CccccCCHHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD---SS-------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~---~~-------~~~~l~~~~~~~~~l 838 (856)
|..++..+++++| ++++++++||| +.||+.| .+.++- .++.|. +. +.|.+.+..++..+|
T Consensus 157 ~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~~G~--~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 157 APAAYALAPRAFG------VPAAQILFVSS-NGWDACG-ATWHGF--TTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp SHHHHTHHHHHHT------SCGGGEEEEES-CHHHHHH-HHHHTC--EEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHhC------CCcccEEEEeC-CHHHHHH-HHHcCC--EEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 4667788999998 67899999999 9999999 776532 244442 11 228899999998888
Q ss_pred HHH
Q 003029 839 QNY 841 (856)
Q Consensus 839 ~~~ 841 (856)
++.
T Consensus 227 ~~~ 229 (233)
T 3umb_A 227 QAR 229 (233)
T ss_dssp HC-
T ss_pred HHh
Confidence 753
No 162
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=94.48 E-value=0.58 Score=51.84 Aligned_cols=94 Identities=5% Similarity=-0.036 Sum_probs=63.4
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
|. +.+++++. .+|..||+||..+ | ..+.+||++++ .|+|+....+ .+..+ ...|+.+++.
T Consensus 307 v~-~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 374 (424)
T 2iya_A 307 VE-VHQWVPQL---DILTKASAFITHA---G-MGSTMEALSNA----VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374 (424)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGC
T ss_pred eE-EecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHcC----CCEEEecCccchHHHHHHHHHCCCEEEcCcCCC
Confidence 55 36788865 5789999988643 4 36899999994 7888887643 12223 2357888765
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~ 548 (856)
+.++++++|.++|+++ +.+++.++..+.+...+.
T Consensus 375 ~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~ 408 (424)
T 2iya_A 375 TAEKLREAVLAVASDP--GVAERLAAVRQEIREAGG 408 (424)
T ss_dssp CHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCH
T ss_pred CHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCc
Confidence 8999999999999864 334444554444544333
No 163
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=94.43 E-value=0.029 Score=61.65 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=40.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---HhhHHHHhc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQ 658 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~ 658 (856)
++++.++||+||||.... .+-|.+.++|+.|.+ .|..++++|+.+ .....+.+.
T Consensus 11 ~~~~~~l~D~DGvl~~g~---------------~~~p~a~~~l~~l~~-~g~~~~~vTNn~~~~~~~~~~~l~ 67 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRGK---------------KPIAGASDALKLLNR-NKIPYILLTNGGGFSERARTEFIS 67 (352)
T ss_dssp -CCEEEEECCBTTTEETT---------------EECTTHHHHHHHHHH-TTCCEEEECSCCSSCHHHHHHHHH
T ss_pred ccCCEEEEECCCeeEcCC---------------eeCcCHHHHHHHHHH-CCCEEEEEeCCCCCCchHHHHHHH
Confidence 378999999999999752 244678999999986 699999999654 455444444
No 164
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=94.23 E-value=0.032 Score=54.38 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=50.0
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--Cc-cccCCHHHHHHHH
Q 003029 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--FL-HYLRMKMCMRFLS 838 (856)
Q Consensus 762 V~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--~~-~~l~~~~~~~~~l 838 (856)
..|...+|+.+++.+ . ++.+++||| +.||++| ++.+ +++|.+++. .+ |.+.+..++.++|
T Consensus 134 ~~~~~~~k~~~l~~l----~--------~~~~i~iGD-~~~Di~~-~~~a---g~~v~~~~~~~~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF----R--------DGFILAMGD-GYADAKM-FERA---DMGIAVGREIPGADLLVKDLKELVDFI 196 (201)
T ss_dssp EECCSSCHHHHHGGG----T--------TSCEEEEEC-TTCCHHH-HHHC---SEEEEESSCCTTCSEEESSHHHHHHHH
T ss_pred CcCCccCHHHHHHhc----C--------cCcEEEEeC-CHHHHHH-HHhC---CceEEECCCCccccEEEccHHHHHHHH
Confidence 455667899999876 2 578999999 9999999 7665 557888765 23 8999999998888
Q ss_pred HHH
Q 003029 839 QNY 841 (856)
Q Consensus 839 ~~~ 841 (856)
+++
T Consensus 197 ~~l 199 (201)
T 4ap9_A 197 KNL 199 (201)
T ss_dssp HTC
T ss_pred HHh
Confidence 765
No 165
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=94.06 E-value=0.017 Score=58.82 Aligned_cols=79 Identities=10% Similarity=-0.069 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC------------CccccCCH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS------------FLHYLRMK 831 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~------------~~~~l~~~ 831 (856)
.+-.|..++.++++++| ++++++++||| +. ||++| .+.++-. +|.|... +.|.+.+.
T Consensus 148 ~~Kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~~Di~~-a~~aG~~--~~~v~~g~~~~~~~~~~~~~~~~i~~~ 217 (241)
T 2hoq_A 148 VKKPHPKIFKKALKAFN------VKPEEALMVGD-RLYSDIYG-AKRVGMK--TVWFRYGKHSERELEYRKYADYEIDNL 217 (241)
T ss_dssp CCTTCHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHH-HHHTTCE--EEEECCSCCCHHHHTTGGGCSEEESST
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHH-HHHCCCE--EEEECCCCCCcccccccCCCCEEECCH
Confidence 45567799999999999 67899999999 97 99999 7766432 3444221 12778899
Q ss_pred HHHHHHHHHHHHHHHhcCCCccc
Q 003029 832 MCMRFLSQNYLMMARAFQEPDQQ 854 (856)
Q Consensus 832 ~~~~~~l~~~~~~~~~~~~~~~~ 854 (856)
.++..+|++.-.. -..++|-||
T Consensus 218 ~el~~~l~~~~~~-~~~~~~~~~ 239 (241)
T 2hoq_A 218 ESLLEVLARESSS-NKKVHPPRQ 239 (241)
T ss_dssp THHHHHHHHCCSC-SSCSCCC--
T ss_pred HHHHHHHHHHhhc-cCCCCCccc
Confidence 9998888764333 234455554
No 166
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=94.03 E-value=0.014 Score=58.39 Aligned_cols=68 Identities=16% Similarity=-0.010 Sum_probs=52.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--C---------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--S---------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--~---------~~~~l~~~~ 832 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|.. . +.|-+.+..
T Consensus 144 ~~~kp~~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~v~~g~~~~~~l~~~~ad~v~~~~~ 213 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIG------APIDECLVIGD-AIWDMLA-ARRCKA--TGVGLLSGGYDIGELERAGALRVYEDPL 213 (233)
T ss_dssp SCCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHTTC--EEEEEGGGSCCHHHHHHTTCSEEESSHH
T ss_pred CCCCCChHHHHHHHHHhC------CCHHHEEEEeC-CHHhHHH-HHHCCC--EEEEEeCCCCchHhHHhcCCCEEECCHH
Confidence 457788999999999999 67899999999 9999999 776643 2555532 1 227788888
Q ss_pred HHHHHHHHH
Q 003029 833 CMRFLSQNY 841 (856)
Q Consensus 833 ~~~~~l~~~ 841 (856)
++..+|++.
T Consensus 214 el~~~l~~~ 222 (233)
T 3s6j_A 214 DLLNHLDEI 222 (233)
T ss_dssp HHHHTGGGT
T ss_pred HHHHHHHHH
Confidence 888777543
No 167
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=93.67 E-value=0.037 Score=56.83 Aligned_cols=67 Identities=7% Similarity=-0.158 Sum_probs=53.4
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------------CccccC
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------------FLHYLR 829 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------------~~~~l~ 829 (856)
.+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.
T Consensus 166 ~~Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~ad~vi~ 235 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLG------ILPERCVVIED-SVTGGAA-GLAAGA--TLWGLLVPGHPHPDGAAALSRLGAARVLT 235 (259)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEECCTTSCCSSCHHHHHHHTCSEEEC
T ss_pred CCCCChHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHH-HHHCCC--EEEEEccCCCcccccHHHHHhcCcchhhC
Confidence 45667999999999999 67899999999 9999999 776642 24667432 228999
Q ss_pred CHHHHHHHHHHH
Q 003029 830 MKMCMRFLSQNY 841 (856)
Q Consensus 830 ~~~~~~~~l~~~ 841 (856)
+..++.++|++.
T Consensus 236 ~l~el~~~l~~~ 247 (259)
T 4eek_A 236 SHAELRAALAEA 247 (259)
T ss_dssp SHHHHHHHHHHT
T ss_pred CHHHHHHHHHhc
Confidence 999999998864
No 168
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=93.49 E-value=0.092 Score=53.98 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+.+.+.+.|+.|.+ .|..++|+|+.+...+...+..+
T Consensus 111 ~~~~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~~~ 148 (277)
T 3iru_A 111 QLIPGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALIAA 148 (277)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHhc
Confidence 456778889999986 68999999999998887777665
No 169
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=93.32 E-value=0.035 Score=54.73 Aligned_cols=61 Identities=5% Similarity=-0.158 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~~~l 838 (856)
|+.++..+++++| ++++++||| +.||+.| .+.++- .++.|... +.|.+.+..++..+|
T Consensus 130 ~~~~~~~~~~~~~--------~~~~~~vGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 130 SPKVYKYFLDSIG--------AKEAFLVSS-NAFDVIG-AKNAGM--RSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp CHHHHHHHHHHHT--------CSCCEEEES-CHHHHHH-HHHTTC--EEEEECSSSCCCCTTSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHhcC--------CCcEEEEeC-CHHHhHH-HHHCCC--EEEEECCCCCCccccCCCCCEEECCHHHHHHHH
Confidence 4667778888875 578999999 9999999 665532 23454321 227888999988887
Q ss_pred HHH
Q 003029 839 QNY 841 (856)
Q Consensus 839 ~~~ 841 (856)
+++
T Consensus 198 ~~~ 200 (201)
T 2w43_A 198 LRY 200 (201)
T ss_dssp HHH
T ss_pred Hhc
Confidence 654
No 170
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=93.14 E-value=0.027 Score=56.33 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=14.7
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+++|+|+||+||||++.
T Consensus 3 ~~~k~i~fDlDGTL~d~ 19 (230)
T 3um9_A 3 HAIKAVVFDLYGTLYDV 19 (230)
T ss_dssp SSCCEEEECSBTTTBCG
T ss_pred CCceEEEEcCCCCcCcc
Confidence 35789999999999976
No 171
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=93.04 E-value=0.03 Score=55.13 Aligned_cols=41 Identities=7% Similarity=-0.048 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
.++..+++++| ++++.+++||| +.+|+.| .+.+ |+ ++.|..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~-a~~a---G~~~~~~~~ 193 (206)
T 2b0c_A 152 RIYQHVLQAEG------FSPSDTVFFDD-NADNIEG-ANQL---GITSILVKD 193 (206)
T ss_dssp HHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHTT---TCEEEECCS
T ss_pred HHHHHHHHHcC------CCHHHeEEeCC-CHHHHHH-HHHc---CCeEEEecC
Confidence 56778899998 67899999999 9999888 5544 43 444443
No 172
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=92.83 E-value=0.09 Score=52.42 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+.+.+.+.|+.|.+ .|..++|+|+.+...+...+..++
T Consensus 91 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 129 (233)
T 3s6j_A 91 IALPGAVELLETLDK-ENLKWCIATSGGIDTATINLKALK 129 (233)
T ss_dssp EECTTHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHTTT
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchhhHHHHHHhcc
Confidence 456778899999986 689999999999998888887764
No 173
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=92.83 E-value=0.049 Score=55.15 Aligned_cols=66 Identities=11% Similarity=-0.004 Sum_probs=49.4
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCC-cceEEEEecCCcccccccccccccCcceEEeC--CC---------CccccCC
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD--SS---------FLHYLRM 830 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~-~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~--~~---------~~~~l~~ 830 (856)
.+.+..|+.+++.+++++| ++ ++++++||| +.||++| .+.++-. +|.|. +. +.|.+.+
T Consensus 162 ~~~~kp~~~~~~~~~~~~g------~~~~~~~i~vGD-~~~Di~~-a~~aG~~--~i~v~~g~~~~~~~~~~~ad~v~~~ 231 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLCN------VKDKDKVIMVGD-RKYDIIG-AKKIGID--SIGVLYGYGSFEEISESEPTYIVEN 231 (240)
T ss_dssp TSCCCCHHHHHHHHHHHHT------CCCGGGEEEEES-SHHHHHH-HHHHTCE--EEEESSSSCCHHHHHHHCCSEEESS
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCCcEEEECC-CHHHHHH-HHHCCCC--EEEEeCCCCCHHHHhhcCCCEEECC
Confidence 3567789999999999999 67 899999999 9999999 7776433 45553 21 1266777
Q ss_pred HHHHHHHH
Q 003029 831 KMCMRFLS 838 (856)
Q Consensus 831 ~~~~~~~l 838 (856)
..++.++|
T Consensus 232 ~~el~~~l 239 (240)
T 3sd7_A 232 VESIKDIL 239 (240)
T ss_dssp STTHHHHH
T ss_pred HHHHHHHh
Confidence 66666554
No 174
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=92.55 E-value=0.18 Score=49.99 Aligned_cols=60 Identities=8% Similarity=-0.094 Sum_probs=42.8
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eE-EeCCC----------CccccCCHHHHHHHHH
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TV-RLDSS----------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v-~V~~~----------~~~~l~~~~~~~~~l~ 839 (856)
....+++++| ++++++++||| +.+|+.+ +...|+ +| .|... .++.+.++.++...|+
T Consensus 145 ~~~~a~~~lg------~~p~e~l~VgD-s~~Di~a----A~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERLN------VVPEKVVVFED-SKSGVEA----AKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHT------CCGGGEEEEEC-SHHHHHH----HHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHH
T ss_pred HHHHHHHhhC------CCccceEEEec-CHHHHHH----HHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHH
Confidence 4566778888 67899999999 8888666 555554 44 34322 1266778899999998
Q ss_pred HHH
Q 003029 840 NYL 842 (856)
Q Consensus 840 ~~~ 842 (856)
+||
T Consensus 214 eLL 216 (216)
T 3kbb_A 214 EVL 216 (216)
T ss_dssp HHC
T ss_pred HHC
Confidence 875
No 175
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=92.30 E-value=0.075 Score=53.19 Aligned_cols=66 Identities=9% Similarity=-0.084 Sum_probs=50.6
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC--------CccccCCHHHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS--------FLHYLRMKMCM 834 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~--------~~~~l~~~~~~ 834 (856)
..+..|+.+++.+++++| ++++++++||| +. ||++| .+.++- .++.+... +.|.+.+..++
T Consensus 159 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~d~vi~sl~e~ 228 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQ------SELRESLMIGD-SWEADITG-AHGVGM--HQAFYNVTERTVFPFQPTYHIHSLKEL 228 (240)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHH-HHHTTC--EEEEECCSCCCCCSSCCSEEESSTHHH
T ss_pred CCCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHH-HHHcCC--eEEEEcCCCCCCcCCCCceEECCHHHH
Confidence 456778999999999999 67899999999 95 99999 766632 24444322 22889999988
Q ss_pred HHHHH
Q 003029 835 RFLSQ 839 (856)
Q Consensus 835 ~~~l~ 839 (856)
..+++
T Consensus 229 ~~~~~ 233 (240)
T 3qnm_A 229 MNLLE 233 (240)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 88765
No 176
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=92.24 E-value=0.074 Score=53.14 Aligned_cols=70 Identities=11% Similarity=-0.122 Sum_probs=50.5
Q ss_pred EEeCCCCHH---HHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCC---------------
Q 003029 762 VRAVGVTKG---AAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDS--------------- 822 (856)
Q Consensus 762 V~p~gvnKG---~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~--------------- 822 (856)
+.....++. .+++. ++++| ++++++++||| +. ||++| .+.++- .++.|..
T Consensus 148 ~~~~KP~~~~~~~~l~~-~~~lg------i~~~~~~~vGD-~~~~Di~~-a~~aG~--~~~~~~~~~~~~g~g~~~~~~~ 216 (240)
T 3smv_A 148 VGSYKPNPNNFTYMIDA-LAKAG------IEKKDILHTAE-SLYHDHIP-ANDAGL--VSAWIYRRHGKEGYGATHVPSR 216 (240)
T ss_dssp HTSCTTSHHHHHHHHHH-HHHTT------CCGGGEEEEES-CTTTTHHH-HHHHTC--EEEEECTTCC-------CCCSS
T ss_pred cCCCCCCHHHHHHHHHH-HHhcC------CCchhEEEECC-CchhhhHH-HHHcCC--eEEEEcCCCcccCCCCCCCCcC
Confidence 334455666 56666 88888 67899999999 95 99999 776642 2334321
Q ss_pred -CC-ccccCCHHHHHHHHHHHH
Q 003029 823 -SF-LHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 823 -~~-~~~l~~~~~~~~~l~~~~ 842 (856)
.. .|.+.+..++.++|++++
T Consensus 217 ~~~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 217 MPNVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCCCCEEeCCHHHHHHHHHHHh
Confidence 11 289999999999998875
No 177
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=92.03 E-value=0.065 Score=53.76 Aligned_cols=73 Identities=11% Similarity=-0.077 Sum_probs=47.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----CccccCCHHHHH-HH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----FLHYLRMKMCMR-FL 837 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----~~~~l~~~~~~~-~~ 837 (856)
..+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..++. ..
T Consensus 143 ~~~Kp~~~~~~~~~~~lg------i~~~~~i~vGD-s~~Di~~-a~~aG~--~~~~~~~~~~~~~ad~v~~s~~el~~~~ 212 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLD------VSPADCAAIED-AEAGISA-IKSAGM--FAVGVGQGQPMLGADLVVRQTSDLTLEL 212 (233)
T ss_dssp ------CCHHHHHHHHHT------SCGGGEEEEEC-SHHHHHH-HHHTTC--EEEECC-------CSEECSSGGGCCHHH
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHEEEEeC-CHHHHHH-HHHcCC--EEEEECCccccccCCEEeCChHhCCHHH
Confidence 445567789999999999 67899999999 9999999 776642 34444332 237788877764 34
Q ss_pred HHHHHHHHH
Q 003029 838 SQNYLMMAR 846 (856)
Q Consensus 838 l~~~~~~~~ 846 (856)
+.+++..++
T Consensus 213 ~~~~~~~~~ 221 (233)
T 3nas_A 213 LHEEWEQYR 221 (233)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 178
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=91.75 E-value=0.56 Score=51.93 Aligned_cols=122 Identities=8% Similarity=-0.030 Sum_probs=76.2
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003029 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (856)
Q Consensus 362 ~~~iIl~V~Rld---~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (856)
...++++.|++. ..|.+..+++|++.+ + .+ ++.+.++. +.. . .. ..
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~~~--------~----~~----~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-RR----VILSRGWT--ELV--------L----PD----DR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-CC----EEEECTTT--TCC--------C----SC----CC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC----C-Ce----EEEEeCCc--ccc--------c----cC----CC----
Confidence 356778899984 567777777777653 1 22 33332221 100 0 00 00
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECC-
Q 003029 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP- 511 (856)
Q Consensus 439 ~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP- 511 (856)
..+. +.+++++.+ +|..||+||. .-|. .++.|+++|+ .|+|+-...+ .+..+ ...|+.+++
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~ 353 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGP 353 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSS
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcC----CCEEEccCCCCcHHHHHHHHHCCCccCCCCC
Confidence 1244 467888655 5699999997 3454 4999999994 7888765533 23333 235777765
Q ss_pred -CCHHHHHHHHHHHHcC
Q 003029 512 -WNITEVANAIARALNM 527 (856)
Q Consensus 512 -~d~~~lA~ai~~aL~~ 527 (856)
.+.++++++|.++ ++
T Consensus 354 ~~~~~~l~~~i~~l-~~ 369 (416)
T 1rrv_A 354 TPTFESLSAALTTV-LA 369 (416)
T ss_dssp CCCHHHHHHHHHHH-TS
T ss_pred CCCHHHHHHHHHHh-hC
Confidence 5889999999999 64
No 179
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=91.64 E-value=0.029 Score=55.52 Aligned_cols=62 Identities=15% Similarity=-0.026 Sum_probs=45.0
Q ss_pred CCCH--HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC--CC-------CccccCCHHHH
Q 003029 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD--SS-------FLHYLRMKMCM 834 (856)
Q Consensus 766 gvnK--G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~--~~-------~~~~l~~~~~~ 834 (856)
+.+| +.+++++++++| ++++++++||| +.||++| .+.++- .++.|. .. +.|.+.+..++
T Consensus 135 ~~~KP~~~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~a~~~~~~~~el 204 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQT-AQAANV--DFGLAVWGMDPNADHQKVAHRFQKPLDI 204 (209)
T ss_dssp SCCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred CCCCCCcHHHHHHHHHcC------CCcccEEEECC-ChhhHHH-HHHcCC--eEEEEcCCCCChhhhccCCEEeCCHHHH
Confidence 6789 999999999999 67899999999 9999999 776632 233332 11 22666666665
Q ss_pred HHH
Q 003029 835 RFL 837 (856)
Q Consensus 835 ~~~ 837 (856)
..+
T Consensus 205 ~~~ 207 (209)
T 2hdo_A 205 LEL 207 (209)
T ss_dssp GGG
T ss_pred HHh
Confidence 544
No 180
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=91.26 E-value=0.22 Score=54.50 Aligned_cols=88 Identities=11% Similarity=0.022 Sum_probs=55.6
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc-c-CCeEEECCCCHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNPWNITEV 517 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l-g-~~g~lVnP~d~~~l 517 (856)
+.+.+++.+ +|..||+||.- -|+| +..|+++|+ .|+|+--+.+ .+..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~h---~G~~-s~~Eal~~G----vP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~ 358 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIHH---GGSG-TLLTALAAG----VPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLG 358 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEEC---CCHH-HHHHHHHHT----CCEEECCC---CHHHHHHHHHHTSEEECCTT--TCS
T ss_pred EEeecCHHH---Hhhhhhheecc---CCcc-HHHHHHHhC----CCEEEecCcccHHHHHHHHHHCCCEEEcCCC--Cch
Confidence 467788665 56889998853 4555 678999994 7888755443 23333 1 236666654 457
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 518 ANAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 518 A~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
+++|.++|+++ +.+++.+++.+.+...
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 89999999864 3444555555555544
No 181
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=91.15 E-value=0.096 Score=53.26 Aligned_cols=65 Identities=5% Similarity=-0.103 Sum_probs=49.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.++..+++++| ++++++++||| +.||+.| .+.++-. +|.|... +.|.+.+..
T Consensus 162 ~~~Kp~p~~~~~~~~~l~------~~~~~~~~vGD-s~~Di~~-a~~aG~~--~v~v~~~~~~~~~~~~~~a~~~~~~~~ 231 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLG------VPRDKCVYIGD-SEIDIQT-ARNSEMD--EIAVNWGFRSVPFLQKHGATVIVDTAE 231 (240)
T ss_dssp SCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHTTCE--EEEESSSSSCHHHHHHTTCCCEECSHH
T ss_pred CCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH-HHHCCCe--EEEECCCCCchhHHHhcCCCEEECCHH
Confidence 467789999999999999 67899999999 9999999 7666422 4555321 126778887
Q ss_pred HHHHHH
Q 003029 833 CMRFLS 838 (856)
Q Consensus 833 ~~~~~l 838 (856)
++..+|
T Consensus 232 el~~~l 237 (240)
T 2hi0_A 232 KLEEAI 237 (240)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776655
No 182
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=90.94 E-value=0.11 Score=51.86 Aligned_cols=66 Identities=11% Similarity=-0.013 Sum_probs=50.6
Q ss_pred CCCCHHHHHHHHHHHhC-cCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC---------CccccCCHHH
Q 003029 765 VGVTKGAAIDRILAEIV-HSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMC 833 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~-~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~ 833 (856)
.+-.|+.+++++++++| . +++++++||| +. ||++| .+.++- .+|.|... +.|.+.+..+
T Consensus 156 ~~kp~~~~~~~~~~~~g~~------~~~~~i~vGD-~~~~Di~~-a~~aG~--~~i~~~~~~~~~~~~~~ad~v~~~~~e 225 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERIPQF------SAEHTLIIGD-SLTADIKG-GQLAGL--DTCWMNPDMKPNVPEIIPTYEIRKLEE 225 (238)
T ss_dssp SCTTCHHHHHHHHHTSTTC------CGGGEEEEES-CTTTTHHH-HHHTTC--EEEEECTTCCCCTTCCCCSEEESSGGG
T ss_pred CCCCChHHHHHHHHHcCCC------ChhHeEEECC-CcHHHHHH-HHHCCC--EEEEECCCCCCCcccCCCCeEECCHHH
Confidence 45677999999999987 4 5799999999 97 99999 776632 25566442 2288999999
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 226 l~~~l~~ 232 (238)
T 3ed5_A 226 LYHILNI 232 (238)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 8887754
No 183
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=90.93 E-value=0.18 Score=49.59 Aligned_cols=34 Identities=15% Similarity=0.022 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
..+++.+++++| ++++++++||| +.||++| .+.+
T Consensus 153 ~~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~-a~~a 186 (211)
T 2i6x_A 153 EDIFLEMIADSG------MKPEETLFIDD-GPANVAT-AERL 186 (211)
T ss_dssp HHHHHHHHHHHC------CCGGGEEEECS-CHHHHHH-HHHT
T ss_pred HHHHHHHHHHhC------CChHHeEEeCC-CHHHHHH-HHHc
Confidence 345668889998 67899999999 9999999 6554
No 184
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=90.51 E-value=0.29 Score=48.15 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=44.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC------Cc-c-ccCCHHHHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------FL-H-YLRMKMCMR 835 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------~~-~-~l~~~~~~~ 835 (856)
|+...|..+++++.. .++.+++||| +.||..| .+.+ |+.+.+.+. +. + .+.+..++.
T Consensus 129 p~p~~~~~~l~~l~~----------~~~~~~~iGD-~~~Di~~-a~~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (206)
T 1rku_A 129 RQKDPKRQSVIAFKS----------LYYRVIAAGD-SYNDTTM-LSEA---HAGILFHAPENVIREFPQFPAVHTYEDLK 193 (206)
T ss_dssp CSSSHHHHHHHHHHH----------TTCEEEEEEC-SSTTHHH-HHHS---SEEEEESCCHHHHHHCTTSCEECSHHHHH
T ss_pred CCCchHHHHHHHHHh----------cCCEEEEEeC-ChhhHHH-HHhc---CccEEECCcHHHHHHHhhhccccchHHHH
Confidence 444567777766532 3578999999 9999999 6655 455555433 12 3 378899998
Q ss_pred HHHHHHH
Q 003029 836 FLSQNYL 842 (856)
Q Consensus 836 ~~l~~~~ 842 (856)
.+|++++
T Consensus 194 ~~l~~~~ 200 (206)
T 1rku_A 194 REFLKAS 200 (206)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8887764
No 185
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=90.09 E-value=0.072 Score=51.53 Aligned_cols=38 Identities=11% Similarity=-0.085 Sum_probs=32.6
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
..+..|+.+++.+++++| ++ ++++||| +.||++| .+.+
T Consensus 134 ~~~kp~~~~~~~~~~~~~------~~--~~~~iGD-~~~Di~~-a~~a 171 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQ------IS--SGLVIGD-RPIDIEA-GQAA 171 (190)
T ss_dssp CCCTTSCHHHHHHHHHTT------CS--SEEEEES-SHHHHHH-HHHT
T ss_pred CCCCCCHHHHHHHHHHcC------CC--eEEEEcC-CHHHHHH-HHHc
Confidence 446678999999999998 55 8999999 9999999 7665
No 186
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=89.85 E-value=0.1 Score=52.52 Aligned_cols=64 Identities=11% Similarity=-0.083 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--------CccccCCHHHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--------~~~~l~~~~~~~~~l 838 (856)
-.|+.++..+++++| ++++.+++||| +.||+.| .+.++- .+|.|... +.|.+.+..++..+|
T Consensus 139 Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 139 KPSPTPVLKTLEILG------EEPEKALIVGD-TDADIEA-GKRAGT--KTALALWGYVKLNSQIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp CCTTHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEETTSSCSCCCCCCSEEESSTTHHHHHH
T ss_pred CCChHHHHHHHHHhC------CCchhEEEECC-CHHHHHH-HHHCCC--eEEEEcCCCCCccccCCCEEECCHHHHHHHH
Confidence 378999999999999 67899999999 9999999 765532 23555421 227888888887776
Q ss_pred HH
Q 003029 839 QN 840 (856)
Q Consensus 839 ~~ 840 (856)
++
T Consensus 209 ~~ 210 (222)
T 2nyv_A 209 DN 210 (222)
T ss_dssp HT
T ss_pred HH
Confidence 53
No 187
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=89.82 E-value=0.14 Score=52.63 Aligned_cols=30 Identities=7% Similarity=0.000 Sum_probs=22.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCcccccccc-CCChhHHHHHHH
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNA 633 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~-~~s~~~~~~L~~ 633 (856)
++|+|+||+||||++.. . .+.+.+.+++++
T Consensus 5 ~ik~i~fDlDGTLld~~--------------~~~~~~~~~~~l~~ 35 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDYG--------------CFAPLEVFMEIFHK 35 (267)
T ss_dssp CCCEEEECSBTTTBSTT--------------CCTTHHHHHHHHHT
T ss_pred CceEEEEecCCCEEeCC--------------CccHHHHHHHHHHH
Confidence 47899999999999862 2 345666666665
No 188
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=89.72 E-value=0.45 Score=47.63 Aligned_cols=42 Identities=14% Similarity=0.063 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
..+++.+++++| ++++++++||| +.+|++| .+.+ |+ +|.|..
T Consensus 176 ~~~~~~~~~~~g------~~~~~~~~vGD-~~~Di~~-a~~a---G~~~i~v~~ 218 (229)
T 4dcc_A 176 PEIFKAVTEDAG------IDPKETFFIDD-SEINCKV-AQEL---GISTYTPKA 218 (229)
T ss_dssp HHHHHHHHHHHT------CCGGGEEEECS-CHHHHHH-HHHT---TCEEECCCT
T ss_pred HHHHHHHHHHcC------CCHHHeEEECC-CHHHHHH-HHHc---CCEEEEECC
Confidence 356788899998 67899999999 9999999 5544 54 344443
No 189
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=89.69 E-value=0.08 Score=51.36 Aligned_cols=31 Identities=10% Similarity=0.252 Sum_probs=23.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
..|+|+||+||||++. ...+++.+.++++++
T Consensus 3 ~~k~i~fDlDGTL~~~--------------~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDS--------------YEAILSGIEETFAQF 33 (207)
T ss_dssp -CCEEEECTBTTTEEC--------------HHHHHHHHHHHHHHH
T ss_pred cccEEEEeCCCccccc--------------HHHHHHHHHHHHHHc
Confidence 3689999999999986 233556677777775
No 190
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=89.67 E-value=0.19 Score=50.21 Aligned_cols=16 Identities=19% Similarity=0.223 Sum_probs=14.1
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 3 ~~k~i~FDlDGTL~d~ 18 (233)
T 3umb_A 3 SIRAVVFDAYGTLFDV 18 (233)
T ss_dssp CCCEEEECSBTTTEET
T ss_pred CceEEEEeCCCccccc
Confidence 5789999999999975
No 191
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=89.58 E-value=0.1 Score=51.87 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=22.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
.+|+|+||+||||++. .....+...++++++
T Consensus 3 ~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 33 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDS--------------EIIAAQVESRLLTEA 33 (229)
T ss_dssp CCSEEEECSBTTTBCC--------------HHHHHHHHHHHHHHT
T ss_pred CccEEEEcCCCCcCcc--------------HHHHHHHHHHHHHHh
Confidence 4689999999999987 223445566666664
No 192
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=88.85 E-value=0.28 Score=49.83 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC-------CC--CccccCCHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD-------SS--FLHYLRMKMCMRF 836 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~-------~~--~~~~l~~~~~~~~ 836 (856)
+..|..++++ ++ .+++.+++||| +.+|..| .+.+ ++.+... .. +.+.+.+..++..
T Consensus 149 ~~~K~~~~~~----~~------~~~~~~~~vGD-s~~Di~~-a~~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 213 (236)
T 2fea_A 149 GCCKPSVIHE----LS------EPNQYIIMIGD-SVTDVEA-AKLS---DLCFARDYLLNECREQNLNHLPYQDFYEIRK 213 (236)
T ss_dssp SSCHHHHHHH----HC------CTTCEEEEEEC-CGGGHHH-HHTC---SEEEECHHHHHHHHHTTCCEECCSSHHHHHH
T ss_pred CCcHHHHHHH----Hh------ccCCeEEEEeC-ChHHHHH-HHhC---CeeeechHHHHHHHHCCCCeeecCCHHHHHH
Confidence 6789877764 45 46789999999 9999998 6654 4333211 11 2378899999999
Q ss_pred HHHHHHHHHHhcCCCcc
Q 003029 837 LSQNYLMMARAFQEPDQ 853 (856)
Q Consensus 837 ~l~~~~~~~~~~~~~~~ 853 (856)
+|++++.....++++.+
T Consensus 214 ~l~~~~~~~~~~~~~~~ 230 (236)
T 2fea_A 214 EIENVKEVQEWLQNKNA 230 (236)
T ss_dssp HHHTSHHHHHHHTCC--
T ss_pred HHHHhHHHHHhhhCccc
Confidence 99988777666666543
No 193
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=88.77 E-value=0.11 Score=52.05 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=23.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+++|+|+||+||||++. ...+.+...++++++
T Consensus 5 m~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 36 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDF--------------QAAEALALRLLFEDQ 36 (238)
T ss_dssp CCCCEEEECCBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred ccCCEEEEcCcCcCcCC--------------chhHHHHHHHHHHHc
Confidence 35799999999999986 233445666666664
No 194
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=88.64 E-value=0.11 Score=52.50 Aligned_cols=32 Identities=9% Similarity=0.042 Sum_probs=24.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+++|+|+||+||||++. ...+.+.+.++++++
T Consensus 13 ~~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDW--------------RTGIATAVADYAARH 44 (254)
T ss_dssp SBCCEEEECCBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCceecC--------------chHHHHHHHHHHHHh
Confidence 35799999999999986 233556677777765
No 195
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=88.46 E-value=0.35 Score=48.32 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=50.7
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCcc---------ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQ---------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~---------~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
..++++++||+||||+.....|....+. .......+-|-+.+.|+.|++ ...++|+|..+...++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 3578899999999999764333110000 000112345789999999986 39999999999999999888
Q ss_pred ccC
Q 003029 659 EYN 661 (856)
Q Consensus 659 ~l~ 661 (856)
.++
T Consensus 103 ~ld 105 (195)
T 2hhl_A 103 LLD 105 (195)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
No 196
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=88.34 E-value=0.25 Score=51.00 Aligned_cols=70 Identities=6% Similarity=-0.212 Sum_probs=54.3
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC-----------Cc-cccCCH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS-----------FL-HYLRMK 831 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-----------~~-~~l~~~ 831 (856)
.+-.|..++..+++++| ++++.+++||| +. ||+.| .+.++- .+|.|... .+ |.+.+.
T Consensus 159 ~~Kp~~~~~~~~~~~~g------~~~~~~~~vGD-~~~~Di~~-a~~aG~--~~i~~~~~~~~~~~~~~~~~ad~v~~~l 228 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLAH------MEPVVAAHVGD-NYLCDYQG-PRAVGM--HSFLVVGPQALDPVVRDSVPKEHILPSL 228 (263)
T ss_dssp SCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHTHH-HHTTTC--EEEEECCSSCCCHHHHHHSCGGGEESSG
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CcHHHHHH-HHHCCC--EEEEEcCCCCCchhhcccCCCceEeCCH
Confidence 34566789999999999 67899999999 96 99999 666532 34555321 13 899999
Q ss_pred HHHHHHHHHHHHH
Q 003029 832 MCMRFLSQNYLMM 844 (856)
Q Consensus 832 ~~~~~~l~~~~~~ 844 (856)
.++..+|+++..+
T Consensus 229 ~el~~~l~~~~~~ 241 (263)
T 3k1z_A 229 AHLLPALDCLEGS 241 (263)
T ss_dssp GGHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998765
No 197
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=88.28 E-value=0.11 Score=51.91 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=21.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+.|+|+||+||||++. ...+.+...++++++
T Consensus 1 ~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 31 (233)
T 3nas_A 1 SLKAVIFDLDGVITDT--------------AEYHFLAWKHIAEQI 31 (233)
T ss_dssp -CCEEEECSBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCCcCCC--------------HHHHHHHHHHHHHHc
Confidence 3689999999999986 233445666666554
No 198
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=87.73 E-value=0.14 Score=52.08 Aligned_cols=64 Identities=6% Similarity=-0.130 Sum_probs=46.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCc--ceEEEEecCCcccccccccccccCcceEEeCCC--------Cc-cccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--------FL-HYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~--d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--------~~-~~l~~~~ 832 (856)
..+-.|..+++.+++++| +++ +++++||| +.||++| .+.++- .+|.|... .+ |.+.+..
T Consensus 168 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~v~~~~~~~~~~~~ad~v~~sl~ 237 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFS------PPPAMEKCLVFED-APNGVEA-ALAAGM--QVVMVPDGNLSRDLTTKATLVLNSLQ 237 (250)
T ss_dssp CSCTTSTHHHHHHHHTSS------SCCCGGGEEEEES-SHHHHHH-HHHTTC--EEEECCCTTSCGGGSTTSSEECSCGG
T ss_pred cCCCCChHHHHHHHHHcC------CCCCcceEEEEeC-CHHHHHH-HHHcCC--EEEEEcCCCCchhhcccccEeecCHH
Confidence 445667889999999999 556 99999999 9999999 776642 24555321 12 7777776
Q ss_pred HHHHH
Q 003029 833 CMRFL 837 (856)
Q Consensus 833 ~~~~~ 837 (856)
++...
T Consensus 238 el~~~ 242 (250)
T 3l5k_A 238 DFQPE 242 (250)
T ss_dssp GCCGG
T ss_pred HhhHH
Confidence 65443
No 199
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=87.72 E-value=0.061 Score=54.86 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=23.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+.+|+|+||+||||++. ...+.+...++++++
T Consensus 28 ~~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 59 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDT--------------ERLYSVVFQEICNRY 59 (250)
T ss_dssp CCCSEEEEETBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred cCCcEEEEcCCCCcCCC--------------HHHHHHHHHHHHHHh
Confidence 45899999999999986 233455666666664
No 200
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=87.62 E-value=0.36 Score=47.54 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=50.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccc---------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~---------~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
.+++++++|+|+||+.....|....+.. ......+-|-+.+.|++|.+ ...++|.|..+...++..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHHH
Confidence 4678999999999997643331101100 00112345789999999986 499999999999999988887
Q ss_pred cC
Q 003029 660 YN 661 (856)
Q Consensus 660 l~ 661 (856)
++
T Consensus 91 ld 92 (181)
T 2ght_A 91 LD 92 (181)
T ss_dssp HC
T ss_pred HC
Confidence 74
No 201
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=87.59 E-value=0.14 Score=51.19 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=14.6
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
++|+|+||+||||++.
T Consensus 4 ~~k~i~fDlDGTL~d~ 19 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWAF 19 (240)
T ss_dssp CCSEEEECCBTTTBCH
T ss_pred CceEEEEcCCCCCcCc
Confidence 5799999999999986
No 202
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=86.74 E-value=0.17 Score=51.83 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=23.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
..+|+|+||+||||++. ...+.+...++++++
T Consensus 26 ~~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 57 (259)
T 4eek_A 26 APFDAVLFDLDGVLVES--------------EGIIAQVWQSVLAER 57 (259)
T ss_dssp CCCSEEEEESBTTTEEC--------------HHHHHHHHHHHHHHT
T ss_pred cCCCEEEECCCCCcccC--------------HHHHHHHHHHHHHHh
Confidence 36899999999999976 233445566666664
No 203
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=86.13 E-value=0.16 Score=50.68 Aligned_cols=17 Identities=18% Similarity=0.188 Sum_probs=14.9
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
++.|+|+||+||||++.
T Consensus 4 ~~~k~i~fD~DGTL~d~ 20 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDW 20 (240)
T ss_dssp GGCSEEEECCBTTTBCH
T ss_pred ccceEEEEeCCCcCcCC
Confidence 35799999999999986
No 204
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=85.20 E-value=0.19 Score=49.44 Aligned_cols=16 Identities=25% Similarity=0.459 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
..|+|+||+||||++.
T Consensus 3 ~~k~iifDlDGTL~d~ 18 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNS 18 (209)
T ss_dssp CCSEEEECSBTTTEEC
T ss_pred cccEEEEcCCCCCcCC
Confidence 4689999999999986
No 205
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=85.02 E-value=0.46 Score=53.66 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=26.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCC------CHhhHHHH
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGS------DRNVLDKN 656 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR------~~~~l~~~ 656 (856)
.+.+.+.++|+.|.+ .|.+++|+|+. ....+...
T Consensus 100 ~~~~~~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 100 KINRPMLQAALMLRK-KGFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEECCCCCCSTTHHHHHHH
T ss_pred CcChhHHHHHHHHHH-CCCEEEEEeCCCccccchhhHHHHH
Confidence 456778899999986 69999999997 55555544
No 206
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=84.72 E-value=1.1 Score=47.27 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=40.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
..+.+++|+|||+......-. ..-..-....+-|.+.++|+.|.+ .|+.++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~--~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGP--YDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCT--TCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCc--hhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 347889999999987532110 000011234567899999999986 79999999999743
No 207
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=84.59 E-value=0.29 Score=47.18 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=22.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+.|+|+||+||||++. ...+++...++++++
T Consensus 5 ~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 35 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDN--------------YETSTAAFVETLALY 35 (190)
T ss_dssp CCSEEEECTBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred cccEEEEeCCCCcCCC--------------HHHHHHHHHHHHHHh
Confidence 4689999999999986 233455666666664
No 208
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=84.47 E-value=0.24 Score=50.02 Aligned_cols=32 Identities=9% Similarity=0.225 Sum_probs=23.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCH 636 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~ 636 (856)
.|+|+||+||||++. .....+...++++++..
T Consensus 2 ~k~iiFDlDGTL~d~--------------~~~~~~~~~~~~~~~~~ 33 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDT--------------SKLAEIARKNAIENMIR 33 (241)
T ss_dssp CCEEEECSBTTTBCH--------------HHHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCCCCCC--------------hhhHHHHHHHHHHHHHH
Confidence 579999999999986 23344567777777653
No 209
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=84.34 E-value=0.53 Score=45.80 Aligned_cols=36 Identities=8% Similarity=-0.069 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
.+..+++.++++++ ++++++++||| +.||+.| .+.+
T Consensus 142 p~~~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~-a~~a 177 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQ------VRPEEAVMVDD-RLQNVQA-ARAV 177 (200)
T ss_dssp TCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHT
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEeCC-CHHHHHH-HHHC
Confidence 45678999999999 67899999999 9999999 6655
No 210
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=84.14 E-value=0.71 Score=45.06 Aligned_cols=14 Identities=14% Similarity=0.237 Sum_probs=12.9
Q ss_pred eEEEEecCCccCCC
Q 003029 592 RLLILGFNATLTEP 605 (856)
Q Consensus 592 rLI~lD~DGTL~~~ 605 (856)
|+|+||+||||++.
T Consensus 2 k~iiFDlDGTL~d~ 15 (201)
T 2w43_A 2 IILAFDIFGTVLDT 15 (201)
T ss_dssp CEEEECCBTTTEEG
T ss_pred cEEEEeCCCceecc
Confidence 78999999999986
No 211
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=83.25 E-value=0.28 Score=49.42 Aligned_cols=15 Identities=27% Similarity=0.722 Sum_probs=13.8
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
+|+|+||+||||++.
T Consensus 29 ik~iifDlDGTL~d~ 43 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDP 43 (240)
T ss_dssp CSEEEECSBTTTEEC
T ss_pred ccEEEEecCCcCccC
Confidence 599999999999986
No 212
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=82.10 E-value=0.33 Score=49.24 Aligned_cols=15 Identities=13% Similarity=0.359 Sum_probs=13.8
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|+|+||+||||++.
T Consensus 4 ~k~viFDlDGTL~ds 18 (240)
T 2hi0_A 4 YKAAIFDMDGTILDT 18 (240)
T ss_dssp CSEEEECSBTTTEEC
T ss_pred ccEEEEecCCCCccC
Confidence 689999999999987
No 213
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=81.56 E-value=1.3 Score=45.60 Aligned_cols=63 Identities=10% Similarity=-0.065 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccccCcc--eEEeCCC----------CccccCCHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLMQTIS--TVRLDSS----------FLHYLRMKMCMR 835 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~~~~~--~v~V~~~----------~~~~l~~~~~~~ 835 (856)
+...+..+++++| ++++.+++||| + .+|+.+ - ...|+ +|.|... +.|.+.+..++.
T Consensus 178 ~p~~~~~~~~~~~------~~~~~~~~vGD-s~~~Di~~-A---~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~ 246 (260)
T 2gfh_A 178 APSIFYHCCDLLG------VQPGDCVMVGD-TLETDIQG-G---LNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP 246 (260)
T ss_dssp CHHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHH-H---HHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-CchhhHHH-H---HHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHH
Confidence 3678899999998 67899999999 8 899888 4 44455 6777431 127888999998
Q ss_pred HHHHHHH
Q 003029 836 FLSQNYL 842 (856)
Q Consensus 836 ~~l~~~~ 842 (856)
.+|+++.
T Consensus 247 ~~l~~~~ 253 (260)
T 2gfh_A 247 ALLQSID 253 (260)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8887653
No 214
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=81.25 E-value=0.85 Score=44.65 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=12.8
Q ss_pred CeEEEEecCCccCC
Q 003029 591 NRLLILGFNATLTE 604 (856)
Q Consensus 591 ~rLI~lD~DGTL~~ 604 (856)
.|+++||+||||++
T Consensus 2 ~k~viFD~DGTL~d 15 (206)
T 1rku_A 2 MEIACLDLEGVLVP 15 (206)
T ss_dssp CEEEEEESBTTTBC
T ss_pred CcEEEEccCCcchh
Confidence 58999999999996
No 215
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=81.19 E-value=0.39 Score=48.89 Aligned_cols=44 Identities=11% Similarity=-0.000 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
.|+.++.++++++| ++++++++||| +.||++| .+.++-. +|.|.
T Consensus 171 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~aG~~--~i~v~ 214 (243)
T 2hsz_A 171 PHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFA-AHSAGCA--VVGLT 214 (243)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHHTCE--EEEES
T ss_pred cCHHHHHHHHHHhC------cChhhEEEEcC-CHHHHHH-HHHCCCe--EEEEc
Confidence 36889999999999 67899999999 9999999 7766422 35553
No 216
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=80.24 E-value=0.48 Score=47.72 Aligned_cols=65 Identities=6% Similarity=-0.058 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC--------------CccccCCH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS--------------FLHYLRMK 831 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~--------------~~~~l~~~ 831 (856)
..|...++.+++ + .+++++++||| +.+|+.+ ++++...|+ +|.|... +.|.+.+.
T Consensus 146 ~~K~~~~~~~~~--~------~~~~~~~~vgD-s~~d~~d-i~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~ 215 (231)
T 2p11_A 146 IHKELMLDQVME--C------YPARHYVMVDD-KLRILAA-MKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERI 215 (231)
T ss_dssp SSGGGCHHHHHH--H------SCCSEEEEECS-CHHHHHH-HHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSG
T ss_pred CChHHHHHHHHh--c------CCCceEEEEcC-ccchhhh-hHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCH
Confidence 456666776666 4 45889999999 9997777 777777664 4666432 22667777
Q ss_pred HHHHHHHHHH
Q 003029 832 MCMRFLSQNY 841 (856)
Q Consensus 832 ~~~~~~l~~~ 841 (856)
.++..+|+++
T Consensus 216 ~el~~~l~~~ 225 (231)
T 2p11_A 216 GDLVEMDAEW 225 (231)
T ss_dssp GGGGGCGGGG
T ss_pred HHHHHHHHHH
Confidence 7776666554
No 217
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=79.77 E-value=2.7 Score=42.24 Aligned_cols=35 Identities=9% Similarity=0.134 Sum_probs=20.4
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
+.|.+.+.|+.|.+ .|..++|+|+.+...++.++.
T Consensus 78 ~~pg~~~~l~~L~~-~g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 78 IREGFREFVAFINE-HEIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp BCTTHHHHHHHHHH-HTCCEEEEEEEEHHHHHHHHT
T ss_pred CCccHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHh
Confidence 34456666666654 466666666666655555554
No 218
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=79.75 E-value=13 Score=39.43 Aligned_cols=97 Identities=10% Similarity=0.077 Sum_probs=55.4
Q ss_pred CceEEEeec-ccccCChH--HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 363 RKVMLGVDR-LDMIKGIP--QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 363 ~~iIl~V~R-ld~~KGi~--~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
+.+++..|- ..+.|..+ ...+..+.+.++ ++ .++++|+|. + .+ .++++.+.++... -.
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~----~vvl~g~~~-----e-~~---~~~~i~~~~~~~~----~~ 241 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GY----QVVLFGSAK-----D-HE---AGNEILAALNTEQ----QA 241 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TC----EEEECCCGG-----G-HH---HHHHHHTTSCHHH----HT
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CC----eEEEEeChh-----h-HH---HHHHHHHhhhhcc----cc
Confidence 346666665 66777765 566666665543 33 344455432 1 11 2222222211000 01
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
++..+.|..+..++.++++.||++|-+.. -+...|.|++
T Consensus 242 ~~~~l~g~~sl~e~~ali~~a~l~I~~Ds-----g~~HlAaa~g 280 (348)
T 1psw_A 242 WCRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALN 280 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTT
T ss_pred ceEeccCcCCHHHHHHHHHhCCEEEecCC-----HHHHHHHHcC
Confidence 35556889999999999999999998752 2344488874
No 219
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=79.14 E-value=40 Score=40.63 Aligned_cols=148 Identities=12% Similarity=0.124 Sum_probs=100.1
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hC------cC-----ccCceEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--EN------SD-----WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG 427 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l~--~~------P~-----~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~ 427 (856)
+..++++|-|++.-|-... +|.-..++.+ .+ |+ ++ .+++|..|-...++. .-+.+-+.|..++.
T Consensus 599 ~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~-P~~~IFaGKAaP~y~-~aK~iIklI~~va~ 676 (879)
T 1ygp_A 599 DTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYP-RKVSIFGGKSAPGYY-MAKLIIKLINCVAD 676 (879)
T ss_dssp GCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSC-CEEEEEECCCCTTCH-HHHHHHHHHHHHHH
T ss_pred CeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCC-CeEEEEeccCCCCcH-HHHHHHHHHHHHHH
Confidence 4578889999999998877 6776665532 34 54 22 366665554433443 23456677788877
Q ss_pred HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc---
Q 003029 428 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--- 502 (856)
Q Consensus 428 ~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--- 502 (856)
-||..=...+.-.|+|+. ..+-.--..++.+|||-..+|+ .|.=|..-+=||.- |++.+|..-|+.-++
T Consensus 677 ~iN~Dp~v~~~LKVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnMKfalN-----GaLtlgtlDGanvEi~e~ 750 (879)
T 1ygp_A 677 IVNNDESIEHLLKVVFVA-DYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMN-----GGLIIGTVDGANVEITRE 750 (879)
T ss_dssp HHTTCGGGTTSEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTT-----TCEEEEESCTHHHHHHHH
T ss_pred HhccChhhCCceEEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHc-----CCeeeecccchhHHHHHH
Confidence 777631111233588765 4466666778999999999998 49889988888874 788999888877655
Q ss_pred -c-CCeEEECCCCHHHHH
Q 003029 503 -G-AGAILVNPWNITEVA 518 (856)
Q Consensus 503 -g-~~g~lVnP~d~~~lA 518 (856)
| ++++++-. +.+++.
T Consensus 751 vG~eN~fiFG~-~~~ev~ 767 (879)
T 1ygp_A 751 IGEDNVFLFGN-LSENVE 767 (879)
T ss_dssp HCGGGSEEESC-CHHHHH
T ss_pred cCcccEEEccC-CHHHHH
Confidence 4 48888853 444443
No 220
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=78.73 E-value=0.57 Score=47.62 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=14.9
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+..|+|+||+||||++.
T Consensus 21 ~~~k~iiFDlDGTL~d~ 37 (243)
T 2hsz_A 21 TQFKLIGFDLDGTLVNS 37 (243)
T ss_dssp SSCSEEEECSBTTTEEC
T ss_pred ccCCEEEEcCCCcCCCC
Confidence 45789999999999986
No 221
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=78.50 E-value=1.6 Score=44.49 Aligned_cols=62 Identities=5% Similarity=-0.144 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCCC-----CccccCCHHHH-HHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSS-----FLHYLRMKMCM-RFLSQNYL 842 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~-----~~~~l~~~~~~-~~~l~~~~ 842 (856)
-.....+++++| ++++++++||| +.+|+.+ +...| .+|.|++. +.|.+.+..++ .+.|+++.
T Consensus 173 p~~~~~a~~~lg------~~p~e~l~VGD-s~~Di~a----A~~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~ 241 (250)
T 4gib_A 173 PEIFLMSAKGLN------VNPQNCIGIED-ASAGIDA----INSANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKY 241 (250)
T ss_dssp SHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH----HHHTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHhC------CChHHeEEECC-CHHHHHH----HHHcCCEEEEECChhHhccCCEEECChHhCCHHHHHHHH
Confidence 457788899998 67899999999 8888666 55555 47888653 22888888776 35555543
No 222
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=78.17 E-value=0.71 Score=45.19 Aligned_cols=16 Identities=13% Similarity=0.191 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
..|+|+||+||||++.
T Consensus 4 m~k~iiFDlDGTL~d~ 19 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHL 19 (211)
T ss_dssp CCSEEEECSBTTTEEE
T ss_pred cceEEEEeCCCeeEec
Confidence 4689999999999976
No 223
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=78.09 E-value=0.69 Score=47.79 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=15.0
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
...|+|+||+||||++.
T Consensus 16 ~~~k~viFDlDGTLvds 32 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLIDT 32 (260)
T ss_dssp CCCCEEEECCBTTTBCH
T ss_pred ccceEEEEcCCCCCCCC
Confidence 45789999999999986
No 224
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=77.86 E-value=0.84 Score=44.88 Aligned_cols=51 Identities=8% Similarity=-0.130 Sum_probs=31.5
Q ss_pred CCcceEEEEecCCcccccccccccc-cCc-ceEEeCCC-----C---c-cccCCH-HHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLM-QTI-STVRLDSS-----F---L-HYLRMK-MCMRFLSQ 839 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~-~~~-~~v~V~~~-----~---~-~~l~~~-~~~~~~l~ 839 (856)
++++.++++|| +.+|-.++.+.+. ..| .+|.|... . . +++.++ .++..+|.
T Consensus 130 ~~~~~~~~vgD-s~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~ 192 (197)
T 1q92_A 130 LTRDKTVVSAD-LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD 192 (197)
T ss_dssp ECSCSTTSCCS-EEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred cCCccEEEECc-ccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhc
Confidence 45788999999 8887322134455 554 45666432 1 2 368888 47776665
No 225
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=77.39 E-value=0.8 Score=45.59 Aligned_cols=60 Identities=8% Similarity=-0.065 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcc-cccccccccccCcceEEeCCCC-----ccccCCHHHHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK-NCNLPLQFLMQTISTVRLDSSF-----LHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~n-De~M~f~~~~~~~~~v~V~~~~-----~~~l~~~~~~~~~l~~~~ 842 (856)
......+++++| .++ ++||| +.+ |+.+ -+.++ -.+|.|.... .+.+.+..++..+|++++
T Consensus 153 ~~~~~~~~~~~~------~~~---~~vgD-~~~~Di~~-a~~aG--~~~i~v~~~~~~~~~~~~i~~l~el~~~l~~~~ 218 (220)
T 2zg6_A 153 PKIFGFALAKVG------YPA---VHVGD-IYELDYIG-AKRSY--VDPILLDRYDFYPDVRDRVKNLREALQKIEEMN 218 (220)
T ss_dssp CCHHHHHHHHHC------SSE---EEEES-SCCCCCCC-SSSCS--EEEEEBCTTSCCTTCCSCBSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcC------CCe---EEEcC-CchHhHHH-HHHCC--CeEEEECCCCCCCCcceEECCHHHHHHHHHHhc
Confidence 357888899988 344 99999 998 9888 44432 1356664321 267888888888887653
No 226
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=76.58 E-value=0.6 Score=46.65 Aligned_cols=15 Identities=20% Similarity=0.554 Sum_probs=13.5
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|+|+||+||||++.
T Consensus 3 ~k~viFDlDGTL~d~ 17 (222)
T 2nyv_A 3 LRVILFDLDGTLIDS 17 (222)
T ss_dssp ECEEEECTBTTTEEC
T ss_pred CCEEEECCCCcCCCC
Confidence 578999999999976
No 227
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=76.53 E-value=0.72 Score=47.45 Aligned_cols=15 Identities=33% Similarity=0.295 Sum_probs=13.4
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|+|+||+||||++.
T Consensus 1 ik~iiFDlDGTL~d~ 15 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRL 15 (263)
T ss_dssp CCEEEECCBTTTEEE
T ss_pred CcEEEEcCCCceeCC
Confidence 478999999999986
No 228
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=75.52 E-value=3.3 Score=45.55 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=53.9
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCC-----CC-------------ccc--------cccccCCChhHHHHHHHhh
Q 003029 582 SIERYLRSNNRLLILGFNATLTEPVDTPGR-----RG-------------DQI--------REMELKLHPDLKQPLNALC 635 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~-----~~-------------~~~--------~~~~~~~s~~~~~~L~~L~ 635 (856)
-.++....+++.++||+||||+....+|.. .+ -++ ....-..-|-+.+.|+.++
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~ 88 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS 88 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh
Confidence 355667788999999999999987433310 00 000 0011223567899999998
Q ss_pred cCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 636 HDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 636 ~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+ +..|+|.|.-.....+..+..+
T Consensus 89 ~--~yeivI~Tas~~~yA~~vl~~L 111 (372)
T 3ef0_A 89 E--LYELHIYTMGTKAYAKEVAKII 111 (372)
T ss_dssp T--TEEEEEECSSCHHHHHHHHHHH
T ss_pred c--CcEEEEEeCCcHHHHHHHHHHh
Confidence 4 8999999999999988888776
No 229
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=75.47 E-value=0.97 Score=43.86 Aligned_cols=16 Identities=13% Similarity=0.152 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 3 ~~k~viFDlDGTL~d~ 18 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTN 18 (200)
T ss_dssp CCCEEEECCBTTTBCC
T ss_pred CceEEEEeCCCeeECC
Confidence 4689999999999986
No 230
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=75.03 E-value=2 Score=43.14 Aligned_cols=64 Identities=16% Similarity=0.078 Sum_probs=47.9
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+++.+++|+|+||+.....+. ....-..-|-+.+.|+.+++ +..|+|.|.-....++..+..+
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~~------~~~~v~~RPgl~eFL~~l~~--~yeivI~Tas~~~ya~~vl~~L 95 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQK------HGWRTAKRPGADYFLGYLSQ--YYEIVLFSSNYMMYSDKIAEKL 95 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEETT------TEEEEEECTTHHHHHHHHTT--TEEEEEECSSCHHHHHHHHHHT
T ss_pred CCCeEEEEeccccEEeeecccc------CceeEEeCCCHHHHHHHHHh--CCEEEEEcCCcHHHHHHHHHHh
Confidence 3567899999999997632210 00112345679999999974 8999999999999999888877
No 231
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=74.77 E-value=1.5 Score=44.63 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=14.6
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
.-.|.|+||+||||++.
T Consensus 24 ~MIKaViFDlDGTLvDs 40 (250)
T 4gib_A 24 AMIEAFIFDLDGVITDT 40 (250)
T ss_dssp CCCCEEEECTBTTTBCC
T ss_pred chhheeeecCCCcccCC
Confidence 34789999999999975
No 232
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=74.47 E-value=1.2 Score=45.44 Aligned_cols=62 Identities=10% Similarity=-0.038 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCCCC--c-cccCC-----HHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSSF--L-HYLRM-----KMCMRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~~--~-~~l~~-----~~~~~~~l~~ 840 (856)
-......++++| ++++++++||| +.+|+.+ ++..| .+|.|.... + .-+++ ...+.++.+.
T Consensus 152 p~~~~~a~~~lg------~~p~e~l~VgD-s~~di~a----A~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~ 220 (243)
T 4g9b_A 152 PEIFLAACAGLG------VPPQACIGIED-AQAGIDA----INASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQN 220 (243)
T ss_dssp THHHHHHHHHHT------SCGGGEEEEES-SHHHHHH----HHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH----HHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHH
Confidence 356788899999 67899999999 8888666 44444 578886542 2 33343 3455555554
Q ss_pred HH
Q 003029 841 YL 842 (856)
Q Consensus 841 ~~ 842 (856)
+.
T Consensus 221 l~ 222 (243)
T 4g9b_A 221 VA 222 (243)
T ss_dssp HS
T ss_pred HH
Confidence 43
No 233
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=74.25 E-value=0.87 Score=50.46 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=35.7
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
-++.|.++++++.|.+ .|+.|+||||-....++.+...+++
T Consensus 220 ir~~p~~~eLi~~L~~-~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEE-NGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 3578999999999987 6999999999999999999888753
No 234
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=74.11 E-value=0.96 Score=43.96 Aligned_cols=17 Identities=12% Similarity=0.278 Sum_probs=14.5
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+..|+|+||+||||++.
T Consensus 5 ~~~k~viFDlDGTL~d~ 21 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDI 21 (206)
T ss_dssp -CCCEEEECCBTTTEEE
T ss_pred ccccEEEEcCCCeeecC
Confidence 45789999999999976
No 235
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=74.07 E-value=1.8 Score=42.49 Aligned_cols=15 Identities=13% Similarity=0.344 Sum_probs=13.0
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|.|+||+||||++.
T Consensus 1 IkAViFD~DGTL~ds 15 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDT 15 (216)
T ss_dssp CCEEEEESBTTTBCC
T ss_pred CeEEEECCCCcccCC
Confidence 477999999999976
No 236
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=73.81 E-value=1.2 Score=42.92 Aligned_cols=44 Identities=9% Similarity=-0.075 Sum_probs=31.0
Q ss_pred ceEEEEecCCcccccccccccccCcceEEeCCC------CccccCCHHHHHHHHHHH
Q 003029 791 DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------FLHYLRMKMCMRFLSQNY 841 (856)
Q Consensus 791 d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------~~~~l~~~~~~~~~l~~~ 841 (856)
+.+++||| +.+|... ++ |.+|.|... ..+++.++.++..+|+++
T Consensus 129 ~~~l~ieD-s~~~i~~---aa---G~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 129 LADYLIDD-NPKQLEI---FE---GKSIMFTASHNVYEHRFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp CCSEEEES-CHHHHHH---CS---SEEEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred cccEEecC-CcchHHH---hC---CCeEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence 45799999 8888543 23 266777532 228999999998888654
No 237
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=72.34 E-value=1.1 Score=43.14 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=30.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.+.+.+.|+.|.+ .|..++|+|+.+...++.. ..+++
T Consensus 79 ~~~~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~-~~~~~ 117 (201)
T 4ap9_A 79 NVSPEARELVETLRE-KGFKVVLISGSFEEVLEPF-KELGD 117 (201)
T ss_dssp CCCHHHHHHHHHHHH-TTCEEEEEEEEETTTSGGG-TTTSS
T ss_pred CCChhHHHHHHHHHH-CCCeEEEEeCCcHHHHHHH-HHcCc
Confidence 567788888999886 6889999998887777666 65554
No 238
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=72.01 E-value=1.3 Score=44.16 Aligned_cols=16 Identities=13% Similarity=0.250 Sum_probs=14.4
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
++|+|+||+||||++.
T Consensus 27 ~ik~viFD~DGTL~d~ 42 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINL 42 (229)
T ss_dssp CCCEEEECSBTTTBCB
T ss_pred CCCEEEEeCCCeEEeC
Confidence 4799999999999986
No 239
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=71.10 E-value=1.8 Score=46.53 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=33.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.+.+.+.|+.|.+ .|.+++|+||.....++.....+++
T Consensus 178 ~~~pg~~~~l~~L~~-~g~~~~ivS~~~~~~~~~~~~~lgl 217 (335)
T 3n28_A 178 PLMPELPELVATLHA-FGWKVAIASGGFTYFSDYLKEQLSL 217 (335)
T ss_dssp CCCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHcCC
Confidence 466788899999986 6999999999998888888877764
No 240
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=70.78 E-value=4.2 Score=42.72 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=33.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
..+.|.+.++++.|.+ .|+.|+|+||--...++.....++
T Consensus 140 i~l~~g~~e~i~~l~~-~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQ-HGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp CCBCBTHHHHHHHHHH-TTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHHHH-cCCeEEEEeCCcHHHHHHHHHHcC
Confidence 3567889999999886 699999999988888888887764
No 241
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=67.93 E-value=4.7 Score=43.36 Aligned_cols=62 Identities=18% Similarity=0.257 Sum_probs=47.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+++++||+||||+.....+. . ..-..-|-+.+.|+.+.+ ...|+|-|......++..+..+
T Consensus 139 ~k~tLVLDLDeTLvh~~~~~~----~---~~~~~RP~l~eFL~~l~~--~yeivIfTas~~~ya~~vld~L 200 (320)
T 3shq_A 139 GKKLLVLDIDYTLFDHRSPAE----T---GTELMRPYLHEFLTSAYE--DYDIVIWSATSMRWIEEKMRLL 200 (320)
T ss_dssp TCEEEEECCBTTTBCSSSCCS----S---HHHHBCTTHHHHHHHHHH--HEEEEEECSSCHHHHHHHHHHT
T ss_pred CCcEEEEeccccEEcccccCC----C---cceEeCCCHHHHHHHHHh--CCEEEEEcCCcHHHHHHHHHHh
Confidence 579999999999998743210 0 011234578899999885 7999999999999999888876
No 242
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=63.80 E-value=2.5 Score=43.64 Aligned_cols=42 Identities=14% Similarity=0.009 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCC
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDS 822 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~ 822 (856)
-.....+++++| .+++++++||| +.+|+.. +...| .+|.|..
T Consensus 190 p~~~~~a~~~lg------~~p~~~l~vgD-s~~di~a----A~~aG~~~i~v~~ 232 (253)
T 2g80_A 190 TQSYANILRDIG------AKASEVLFLSD-NPLELDA----AAGVGIATGLASR 232 (253)
T ss_dssp HHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH----HHTTTCEEEEECC
T ss_pred HHHHHHHHHHcC------CCcccEEEEcC-CHHHHHH----HHHcCCEEEEEcC
Confidence 567788899999 67899999999 8887555 55555 4566643
No 243
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=62.07 E-value=4.7 Score=39.12 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccccCcceEEeC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~~~~~~v~V~ 821 (856)
+....+.++++++ ++++.+++||| + .+|+.+ -+.++ -.+|.|.
T Consensus 99 ~p~~~~~~~~~~~------~~~~~~l~VGD-~~~~Di~~-A~~aG--~~~i~v~ 142 (189)
T 3ib6_A 99 DKTIFDFTLNALQ------IDKTEAVMVGN-TFESDIIG-ANRAG--IHAIWLQ 142 (189)
T ss_dssp SHHHHHHHHHHHT------CCGGGEEEEES-BTTTTHHH-HHHTT--CEEEEEC
T ss_pred CHHHHHHHHHHcC------CCcccEEEECC-CcHHHHHH-HHHCC--CeEEEEC
Confidence 4578899999998 57899999999 9 699887 44332 2466664
No 244
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=59.37 E-value=5.7 Score=41.69 Aligned_cols=50 Identities=4% Similarity=-0.002 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
..+|.....+.......- ...+.|+++|| +.||.+| .+.+....+++++|
T Consensus 210 ~~~k~~~~~k~~~~~~~~----~~~~~v~~vGD-GiNDa~m-~k~l~~advgiaiG 259 (297)
T 4fe3_A 210 VFNKHDGALKNTDYFSQL----KDNSNIILLGD-SQGDLRM-ADGVANVEHILKIG 259 (297)
T ss_dssp TTCHHHHHHTCHHHHHHT----TTCCEEEEEES-SGGGGGT-TTTCSCCSEEEEEE
T ss_pred hhhcccHHHHHHHHHHhh----ccCCEEEEEeC-cHHHHHH-HhCccccCeEEEEE
Confidence 357877766544333210 23568999999 9999999 88776666666665
No 245
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=57.90 E-value=3.6 Score=42.40 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=0.0
Q ss_pred CCeEEEEecCCccCC
Q 003029 590 NNRLLILGFNATLTE 604 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~ 604 (856)
..|.|+||+||||++
T Consensus 9 ~ikaviFDlDGTL~d 23 (261)
T 1yns_A 9 EVTVILLDIEGTTTP 23 (261)
T ss_dssp TCCEEEECCBTTTBC
T ss_pred CCCEEEEecCCCccc
No 246
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=56.77 E-value=1.2 Score=44.59 Aligned_cols=17 Identities=12% Similarity=0.358 Sum_probs=14.6
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+..|+|+||+||||++.
T Consensus 9 ~~~k~viFDlDGTL~ds 25 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDN 25 (231)
T ss_dssp CCSEEEEECCBTTTBCH
T ss_pred CCCeEEEEcCCCCCEec
Confidence 35789999999999986
No 247
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=55.31 E-value=3.9 Score=42.70 Aligned_cols=57 Identities=12% Similarity=-0.025 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-ccc--CCHHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYL--RMKMCMRFL 837 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l--~~~~~~~~~ 837 (856)
-+|..++++ ++ .+ +.+++||| +.||..| .+.+ +++|.+++.. + +-+ .+..++..+
T Consensus 212 ~~K~~~~~~----l~------~~-~~~~~vGD-s~~Di~~-a~~a---g~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~ 275 (287)
T 3a1c_A 212 HQKSEEVKK----LQ------AK-EVVAFVGD-GINDAPA-LAQA---DLGIAVGSGSDVAVESGDIVLIRDDLRDVVAA 275 (287)
T ss_dssp TCHHHHHHH----HT------TT-CCEEEEEC-TTTCHHH-HHHS---SEEEEECCCSCCSSCCSSEEESSSCTHHHHHH
T ss_pred HHHHHHHHH----Hh------cC-CeEEEEEC-CHHHHHH-HHHC---CeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHH
Confidence 378666554 45 34 78999999 9999999 6655 4557776431 2 677 777777665
Q ss_pred HH
Q 003029 838 SQ 839 (856)
Q Consensus 838 l~ 839 (856)
|+
T Consensus 276 l~ 277 (287)
T 3a1c_A 276 IQ 277 (287)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 248
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=51.96 E-value=14 Score=46.02 Aligned_cols=40 Identities=3% Similarity=0.143 Sum_probs=34.8
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
++.+++.++|+.|.+ .|++|+++||+..........++++
T Consensus 603 ~lr~~~~~~I~~l~~-~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred CCchhHHHHHHHHHH-cCCEEEEECCCCHHHHHHHHHHcCc
Confidence 466789999999986 7999999999999999888887754
No 249
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=51.01 E-value=5.6 Score=43.86 Aligned_cols=39 Identities=13% Similarity=0.052 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
..-.|..++.++++++| ++++++++||| +.+|.++ .+.+
T Consensus 309 ~~KPKp~~l~~al~~Lg------l~pee~v~VGD-s~~Di~a-araa 347 (387)
T 3nvb_A 309 NWENKADNIRTIQRTLN------IGFDSMVFLDD-NPFERNM-VREH 347 (387)
T ss_dssp ESSCHHHHHHHHHHHHT------CCGGGEEEECS-CHHHHHH-HHHH
T ss_pred CCCCcHHHHHHHHHHhC------cCcccEEEECC-CHHHHHH-HHhc
Confidence 34579999999999999 67899999999 9999888 6544
No 250
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=46.61 E-value=18 Score=45.23 Aligned_cols=41 Identities=2% Similarity=0.037 Sum_probs=36.1
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.++.+++.++|++|.+ .|++|+++||+...........+++
T Consensus 598 Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ia~~lgi 638 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVGI 638 (1028)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTS
T ss_pred CCCChhHHHHHHHHHH-cCCEEEEECCCCHHHHHHHHHHcCC
Confidence 4678899999999986 7999999999999999888888753
No 251
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=44.87 E-value=7.7 Score=34.60 Aligned_cols=44 Identities=11% Similarity=-0.068 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
+....+.++++++ ++++++++||| +.+|+.+ .+.++ -.+|.|..
T Consensus 76 ~~~~~~~~~~~~~------~~~~~~~~vgD-~~~di~~-a~~~G--~~~i~~~~ 119 (137)
T 2pr7_A 76 EEAAFQAAADAID------LPMRDCVLVDD-SILNVRG-AVEAG--LVGVYYQQ 119 (137)
T ss_dssp SHHHHHHHHHHTT------CCGGGEEEEES-CHHHHHH-HHHHT--CEEEECSC
T ss_pred CHHHHHHHHHHcC------CCcccEEEEcC-CHHHHHH-HHHCC--CEEEEeCC
Confidence 3567888999998 66889999999 9999777 44432 14555543
No 252
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=44.82 E-value=21 Score=37.45 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=26.7
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe
Q 003029 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 493 (856)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS 493 (856)
+++..+|+.||+++.+ -| .++.|+++++ .|.|+-
T Consensus 217 ~~m~~~m~~aDlvI~~---gG--~T~~E~~~~g----~P~i~i 250 (282)
T 3hbm_A 217 ENIAKLMNESNKLIIS---AS--SLVNEALLLK----ANFKAI 250 (282)
T ss_dssp SCHHHHHHTEEEEEEE---SS--HHHHHHHHTT----CCEEEE
T ss_pred HHHHHHHHHCCEEEEC---Cc--HHHHHHHHcC----CCEEEE
Confidence 5799999999999873 34 7999999994 555543
No 253
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=50.19 E-value=4.7 Score=41.63 Aligned_cols=29 Identities=21% Similarity=0.183 Sum_probs=22.1
Q ss_pred CcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 789 AIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 789 ~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
+++.++++|| +.||..| .+.++ ++|.+++
T Consensus 197 ~~~~~~~VGD-~~~D~~a-a~~Ag---v~va~g~ 225 (263)
T 2yj3_A 197 NGNKVLMIGD-GVNDAAA-LALAD---VSVAMGN 225 (263)
Confidence 4678999999 9999999 77664 4555543
No 254
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=40.86 E-value=28 Score=34.00 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=14.1
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 2 ~~k~viFDlDGTL~d~ 17 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGF 17 (220)
T ss_dssp CCCEEEECSBTTTEEE
T ss_pred CceEEEEcCCCceecc
Confidence 4689999999999976
No 255
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=39.66 E-value=21 Score=34.89 Aligned_cols=64 Identities=11% Similarity=-0.084 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCCC-------------------------
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSS------------------------- 823 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~------------------------- 823 (856)
-..+.+.+++++.. +.+.+++||| +.+|+.+ +...| .+|.|...
T Consensus 90 p~~~~~a~~~l~~~-----~~~~~v~VGD-s~~Di~a----A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~ 159 (196)
T 2oda_A 90 PDACWMALMALNVS-----QLEGCVLISG-DPRLLQS----GLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQ 159 (196)
T ss_dssp THHHHHHHHHTTCS-----CSTTCEEEES-CHHHHHH----HHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCC-----CCccEEEEeC-CHHHHHH----HHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHH
Confidence 45677788888831 3478999999 9888766 44444 36666431
Q ss_pred ---------CccccCCHHHHHHHHHHHHH
Q 003029 824 ---------FLHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 824 ---------~~~~l~~~~~~~~~l~~~~~ 843 (856)
+.|-+.+..++..+|+.+..
T Consensus 160 ~~~~l~~~~~d~vi~~~~eL~~~l~~~~~ 188 (196)
T 2oda_A 160 ATLKLYSLGVHSVIDHLGELESCLADIAL 188 (196)
T ss_dssp HHHHHHHTTCSEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEeCCHHHHHHHHHHHHH
Confidence 22778888888888877643
No 256
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=38.16 E-value=1.7e+02 Score=26.04 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=47.8
Q ss_pred CHHHHHHHHHH--c-cEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchh---hc--c-CCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV--T-DVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--G-AGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~--A-Dv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g-~~g~lVnP~d~~~lA 518 (856)
+.++...+++. . |++++-.. -+.-|+-.++.+-.......++++|....... .+ | ..+++.-|.+.+++.
T Consensus 35 ~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~ 114 (151)
T 3kcn_A 35 SGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIK 114 (151)
T ss_dssp SHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHH
Confidence 44555555543 2 77776433 34445666666554322233455665544322 22 5 568999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|..++.
T Consensus 115 ~~i~~~l~ 122 (151)
T 3kcn_A 115 AAINAGIK 122 (151)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 257
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=37.55 E-value=1.9e+02 Score=25.82 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=45.4
Q ss_pred HHHHHHHHH--HccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHH
Q 003029 450 FPALCALYA--VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAI 521 (856)
Q Consensus 450 ~~el~aly~--~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai 521 (856)
.++...++. ..|++++-.. -+.-|+-.++.+........++++|........ + |..+++.-|.+.+++..+|
T Consensus 36 ~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i 115 (155)
T 1qkk_A 36 ATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSA 115 (155)
T ss_dssp HHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHH
Confidence 344444433 2477665433 233345556665433222334556655442221 2 6678999999999999999
Q ss_pred HHHHc
Q 003029 522 ARALN 526 (856)
Q Consensus 522 ~~aL~ 526 (856)
..++.
T Consensus 116 ~~~~~ 120 (155)
T 1qkk_A 116 RRAEE 120 (155)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
No 258
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=37.36 E-value=2.1e+02 Score=30.34 Aligned_cols=36 Identities=6% Similarity=-0.002 Sum_probs=27.8
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
.-+.|..+-.++.++++.||++|-+-. |.+-+ |.|.
T Consensus 244 ~~l~g~~sl~e~~ali~~a~~~i~~Ds----G~~Hl-Aaa~ 279 (349)
T 3tov_A 244 IVATGKFQLGPLAAAMNRCNLLITNDS----GPMHV-GISQ 279 (349)
T ss_dssp EECTTCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHTT
T ss_pred EEeeCCCCHHHHHHHHHhCCEEEECCC----CHHHH-HHhc
Confidence 446889999999999999999997621 44455 6676
No 259
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=37.27 E-value=20 Score=44.69 Aligned_cols=41 Identities=12% Similarity=-0.040 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
-+|...++.+.+. | ..|+++|| +.||.+| |+.+ +++|.++.
T Consensus 701 ~~K~~iV~~lq~~-g---------~~V~~iGD-G~ND~pa-Lk~A---dvGIAmg~ 741 (1028)
T 2zxe_A 701 QQKLIIVEGCQRQ-G---------AIVAVTGD-GVNDSPA-LKKA---DIGVAMGI 741 (1028)
T ss_dssp HHHHHHHHHHHHT-T---------CCEEEEEC-SGGGHHH-HHHS---SEEEEESS
T ss_pred HHHHHHHHHHHhC-C---------CEEEEEcC-CcchHHH-HHhC---CceEEeCC
Confidence 3799999987653 3 36999999 9999999 8765 67777773
No 260
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=36.93 E-value=1.2e+02 Score=26.76 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=49.1
Q ss_pred CHHHHHHHHH----HccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYA----VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~----~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA 518 (856)
+.++...++. ..|++++-.. -+.-|+-.++.+-.......++++|....... .+ |..+++.-|.+.+++.
T Consensus 35 ~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~ 114 (143)
T 3jte_A 35 SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLS 114 (143)
T ss_dssp SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHH
Confidence 4455555554 4577766443 34445566666554322234556676554322 22 6678999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|..++.
T Consensus 115 ~~l~~~~~ 122 (143)
T 3jte_A 115 IAINNAIN 122 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 261
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=36.67 E-value=1.6e+02 Score=26.54 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=46.0
Q ss_pred HHHHHHHHHH----ccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHH
Q 003029 450 FPALCALYAV----TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVAN 519 (856)
Q Consensus 450 ~~el~aly~~----ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ 519 (856)
.++...++.. .|++++--. -+.-|+-.++.+-.......++++|........ + |..+++.-|.+.+++.+
T Consensus 70 ~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 149 (157)
T 3hzh_A 70 GEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQ 149 (157)
T ss_dssp HHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence 3444444432 366665433 333445566665543222345566665433322 2 67789999999999999
Q ss_pred HHHHHHc
Q 003029 520 AIARALN 526 (856)
Q Consensus 520 ai~~aL~ 526 (856)
+|.++|.
T Consensus 150 ~i~~~l~ 156 (157)
T 3hzh_A 150 RVMSVFV 156 (157)
T ss_dssp HHHHTTC
T ss_pred HHHHHhc
Confidence 9998874
No 262
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=33.82 E-value=18 Score=39.84 Aligned_cols=47 Identities=11% Similarity=0.109 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
+-.|..+|+.+++.. +....++++|| +.||.+| ++.+...++.+.+.
T Consensus 295 ~~gK~~~i~~~~~~~-------~~~~~i~a~GD-s~~D~~M-L~~~~~~~~~liin 341 (385)
T 4gxt_A 295 REGKVQTINKLIKND-------RNYGPIMVGGD-SDGDFAM-LKEFDHTDLSLIIH 341 (385)
T ss_dssp THHHHHHHHHHTCCT-------TEECCSEEEEC-SGGGHHH-HHHCTTCSEEEEEC
T ss_pred CCchHHHHHHHHHhc-------CCCCcEEEEEC-CHhHHHH-HhcCccCceEEEEc
Confidence 445888887765321 22456899999 9999999 99998888888885
No 263
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=33.80 E-value=28 Score=34.78 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=14.9
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+++|.|+||+||||++.
T Consensus 3 MkiKaViFDlDGTL~Ds 19 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDT 19 (243)
T ss_dssp CCCCEEEECSBTTTBCC
T ss_pred ccCcEEEEcCCCcccCC
Confidence 46789999999999976
No 264
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=33.72 E-value=2.5e+02 Score=31.23 Aligned_cols=109 Identities=12% Similarity=-0.017 Sum_probs=66.7
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-----ch---hhccCCeEEECC-----
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-----AA---QSLGAGAILVNP----- 511 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-----~~---~~lg~~g~lVnP----- 511 (856)
.+.+++. .++..++|.++=+ .-|+|- .+|+++++ .|+|+--+.+ +. +.+ .-|+.++.
T Consensus 344 ~~w~Pq~---~vL~h~~v~~fvt-HgG~~S-~~Eal~~G----vP~i~~P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~ 413 (480)
T 2vch_A 344 PFWAPQA---QVLAHPSTGGFLT-HCGWNS-TLESVVSG----IPLIAWPLYAEQKMNAVLLSEDI-RAALRPRAGDDGL 413 (480)
T ss_dssp ESCCCHH---HHHHSTTEEEEEE-CCCHHH-HHHHHHHT----CCEEECCCSTTHHHHHHHHHHTT-CCEECCCCCTTSC
T ss_pred eCccCHH---HHhCCCCcCeEEe-cccchh-HHHHHHcC----CCEEeccccccchHHHHHHHHHh-CeEEEeecccCCc
Confidence 5678865 6788899744433 367665 68999994 6777655432 11 112 23666654
Q ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHhH
Q 003029 512 WNITEVANAIARALNMSP-EEREKRHWHNFTHVTT-----HTAQEWAETFVSELNDTV 563 (856)
Q Consensus 512 ~d~~~lA~ai~~aL~~~~-~er~~r~~~~~~~v~~-----~~~~~W~~~fl~~l~~~~ 563 (856)
.+.++++++|.++|+... .+-+++.+++.+.+.. -+...=.+.|++.+.+..
T Consensus 414 ~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~~~ 471 (480)
T 2vch_A 414 VRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHK 471 (480)
T ss_dssp CCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhH
Confidence 378999999999997432 2344445555554443 223455667887776633
No 265
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=33.33 E-value=14 Score=45.54 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=50.7
Q ss_pred HHHHHHhcCCeEEEEecCC-----ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 582 SIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
..+.|.....|.+++-++. +++--.. ..-+|-+++.++|++|.+ .|+.|+++||.........
T Consensus 501 ~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~-----------i~Dp~R~ea~~aI~~l~~-aGI~v~MiTGD~~~TA~aI 568 (920)
T 1mhs_A 501 KVAEFATRGFRSLGVARKRGEGSWEILGIMP-----------CMDPPRHDTYKTVCEAKT-LGLSIKMLTGDAVGIARET 568 (920)
T ss_dssp HHHHHHTSSCCCCEECCCSSSCSCCCCBBCC-----------CCCCCCHHHHHHHHHHHH-HTCEEEEEESSCHHHHHHH
T ss_pred HHHHHHhCCCEEEEEEEeccccccEEEEEEE-----------EeccccccHHHHHHHHhh-cCceEEEEcCCCHHHHHHH
Confidence 3455666667777776653 4432211 133577899999999986 7999999999999999988
Q ss_pred hcccCc
Q 003029 657 FQEYNL 662 (856)
Q Consensus 657 ~~~l~l 662 (856)
.+++++
T Consensus 569 A~~lGI 574 (920)
T 1mhs_A 569 SRQLGL 574 (920)
T ss_dssp HHHHTS
T ss_pred HHHcCC
Confidence 888775
No 266
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=31.89 E-value=1.6e+02 Score=25.12 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=47.1
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+.++...++.. .|++++--.. +.=|+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 35 ~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 114 (126)
T 1dbw_A 35 SAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEA 114 (126)
T ss_dssp CHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHH
Confidence 44555555543 4666653322 22344555555432222345566766543222 2 667999999999999999
Q ss_pred HHHHHcC
Q 003029 521 IARALNM 527 (856)
Q Consensus 521 i~~aL~~ 527 (856)
|..++..
T Consensus 115 i~~~~~~ 121 (126)
T 1dbw_A 115 IERASEH 121 (126)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9998753
No 267
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=31.67 E-value=1.4e+02 Score=26.66 Aligned_cols=68 Identities=25% Similarity=0.241 Sum_probs=42.8
Q ss_pred ccEEEECC-CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHHHHHHcC
Q 003029 460 TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 460 ADv~v~~S-~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
.|++++-. +-+.-|+-.++.+-.......++++|........ + |..+++.-|.+.+++..+|..++.-
T Consensus 62 ~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 62 PDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp CSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 46655533 2334455666666543222335556665543321 2 6789999999999999999999864
No 268
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=31.66 E-value=51 Score=40.50 Aligned_cols=45 Identities=13% Similarity=0.043 Sum_probs=35.0
Q ss_pred EEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 761 EV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
++.|. +|...++.+.+. | ..|+++|| +.||.+| ++.+ .++|.+++
T Consensus 609 rv~P~--~K~~iV~~Lq~~-g---------~~Vam~GD-GvNDapa-Lk~A---dvGIAmg~ 653 (920)
T 1mhs_A 609 EVFPQ--HKYNVVEILQQR-G---------YLVAMTGD-GVNDAPS-LKKA---DTGIAVEG 653 (920)
T ss_dssp SCCST--HHHHHHHHHHTT-T---------CCCEECCC-CGGGHHH-HHHS---SEEEEETT
T ss_pred EeCHH--HHHHHHHHHHhC-C---------CeEEEEcC-CcccHHH-HHhC---CcCccccc
Confidence 44454 899999988653 4 46899999 9999999 7755 67777775
No 269
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=31.60 E-value=1.3e+02 Score=26.85 Aligned_cols=67 Identities=18% Similarity=0.345 Sum_probs=41.1
Q ss_pred cEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHHHHHHHHHcC
Q 003029 461 DVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 461 Dv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
|++++-.. -+.-|+-.++.+........++++|....... .+ |..+++.-|.+.+++..+|..++..
T Consensus 68 dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 68 DIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp SEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 55554332 23334555555554322234555666554222 12 6679999999999999999999864
No 270
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=30.65 E-value=2.6e+02 Score=24.07 Aligned_cols=78 Identities=18% Similarity=0.211 Sum_probs=47.8
Q ss_pred CHHHHHHHHHH--ccEEEECCCCcCC-ChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLRDGM-NLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~EG~-~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...+++. .|++++--...++ |+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 37 ~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~ 116 (133)
T 3b2n_A 37 NGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVET 116 (133)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHH
T ss_pred CHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 34555554443 5877765433333 45566666543222334556766543222 2 667999999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 117 i~~~~~ 122 (133)
T 3b2n_A 117 INKVNN 122 (133)
T ss_dssp HHHHHC
T ss_pred HHHHHc
Confidence 999875
No 271
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=30.41 E-value=1.3e+02 Score=26.28 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=42.0
Q ss_pred CHHHHHHHHHH--ccEEEECC-CCcCCChhHHHHHhhcC--CCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQD--LKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S-~~EG~~Lv~lEama~~~--~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA 518 (856)
+.++...++.. .|++++-. +-++-|+-.++.+.... ....++++|....... .+ |..+++.-|.+.+++.
T Consensus 34 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 113 (140)
T 3n53_A 34 NEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLL 113 (140)
T ss_dssp SHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHH
Confidence 34444444432 36666543 23344555666665432 2233455565432221 22 6678999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|..++.
T Consensus 114 ~~i~~~~~ 121 (140)
T 3n53_A 114 SRIEIHLR 121 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999884
No 272
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=30.17 E-value=1.5e+02 Score=24.89 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=46.2
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+.++...++.. .|++++--.. +.-|+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 32 ~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 111 (121)
T 2pl1_A 32 DAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMAR 111 (121)
T ss_dssp SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEECCCCHHHHHHH
Confidence 34455554443 4777664322 22345556665533222345566665543322 2 667899999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 112 i~~~~~ 117 (121)
T 2pl1_A 112 MQALMR 117 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 273
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.46 E-value=85 Score=28.24 Aligned_cols=78 Identities=18% Similarity=0.160 Sum_probs=47.5
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--c-CCeEEECCCCHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--G-AGAILVNPWNITEVAN 519 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g-~~g~lVnP~d~~~lA~ 519 (856)
+.++...++.. .|++++--. -+.-|+-.++.+-.......++++|........ + | ..+++.-|.+.+++..
T Consensus 46 ~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~ 125 (153)
T 3hv2_A 46 DATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLL 125 (153)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHH
Confidence 44555555443 366665433 344456666666543222345556665443322 2 5 5689999999999999
Q ss_pred HHHHHHc
Q 003029 520 AIARALN 526 (856)
Q Consensus 520 ai~~aL~ 526 (856)
+|..++.
T Consensus 126 ~i~~~l~ 132 (153)
T 3hv2_A 126 ALRQALE 132 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 274
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=29.39 E-value=1.4e+02 Score=26.09 Aligned_cols=78 Identities=9% Similarity=0.083 Sum_probs=47.5
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhh-c--cCCeEEECCCCHHHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-L--GAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~-l--g~~g~lVnP~d~~~lA~ai~ 522 (856)
+..+...++.. .|++++--.. +.-|+-.++.+........++++|........ + |..+++.-|.+.+++..+|.
T Consensus 43 ~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~ 122 (143)
T 2qv0_A 43 DGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQ 122 (143)
T ss_dssp CHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHHHHhCCcceEEeCCCCHHHHHHHHH
Confidence 44555555443 4777765433 33355666666543222234556655432222 2 66789999999999999999
Q ss_pred HHHc
Q 003029 523 RALN 526 (856)
Q Consensus 523 ~aL~ 526 (856)
.++.
T Consensus 123 ~~~~ 126 (143)
T 2qv0_A 123 KLTT 126 (143)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9884
No 275
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=29.11 E-value=2.8e+02 Score=23.96 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=47.9
Q ss_pred CHHHHHHHHHH-------ccEEEECCCCcC-CChhHHHHHhhc-CCCCceEEEeCCCCchhh---c--cCCeEEECCCCH
Q 003029 449 DFPALCALYAV-------TDVALVTSLRDG-MNLVSYEFVACQ-DLKKGVLILSEFAGAAQS---L--GAGAILVNPWNI 514 (856)
Q Consensus 449 ~~~el~aly~~-------ADv~v~~S~~EG-~~Lv~lEama~~-~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~ 514 (856)
+.++...+++. .|++++=-.-.| =|+-.++.+-.. .....++++|........ + |..+++.-|.+.
T Consensus 35 ~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~ 114 (133)
T 2r25_B 35 DGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKR 114 (133)
T ss_dssp SHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCH
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCH
Confidence 34555554443 477776433222 245556666432 122345567766554322 2 677999999999
Q ss_pred HHHHHHHHHHHcC
Q 003029 515 TEVANAIARALNM 527 (856)
Q Consensus 515 ~~lA~ai~~aL~~ 527 (856)
+++.++|.+++..
T Consensus 115 ~~L~~~l~~~~~~ 127 (133)
T 2r25_B 115 PKLKTILTEFCAA 127 (133)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 276
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=28.63 E-value=1.3e+02 Score=25.08 Aligned_cols=77 Identities=10% Similarity=0.129 Sum_probs=44.9
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchh-h--ccCCeEEECCCCHHHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-S--LGAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~--lg~~g~lVnP~d~~~lA~ai~ 522 (856)
+.++...++.. .|++++--. -+.-|+-.++.+........++++|....... . .|..+++.-|.+.+++..+|.
T Consensus 33 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~ 112 (116)
T 3a10_A 33 NGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSDMSSWAADEYVVKSFNFDELKEKVK 112 (116)
T ss_dssp SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGGGCGGGGGSSEEEECCSSTHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchHHHHHhccccceEECCCCHHHHHHHHH
Confidence 34555554443 466665432 23334555666543222234555665543321 1 266789999999999999998
Q ss_pred HHH
Q 003029 523 RAL 525 (856)
Q Consensus 523 ~aL 525 (856)
.++
T Consensus 113 ~~~ 115 (116)
T 3a10_A 113 KLL 115 (116)
T ss_dssp HHT
T ss_pred HHh
Confidence 875
No 277
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.63 E-value=1.4e+02 Score=25.13 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=44.6
Q ss_pred HHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHH
Q 003029 450 FPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAI 521 (856)
Q Consensus 450 ~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai 521 (856)
.++...+++. .|++++--.. +.-|+-.++.+.........+++|........ + |..+++.-|.+.+++..+|
T Consensus 36 ~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 115 (120)
T 1tmy_A 36 GREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEAL 115 (120)
T ss_dssp HHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHH
Confidence 3444444433 4776654332 22345556665432222345566665543321 2 6678999999999999999
Q ss_pred HHHH
Q 003029 522 ARAL 525 (856)
Q Consensus 522 ~~aL 525 (856)
.+++
T Consensus 116 ~~~~ 119 (120)
T 1tmy_A 116 NKVS 119 (120)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8875
No 278
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=28.19 E-value=24 Score=37.85 Aligned_cols=38 Identities=11% Similarity=0.178 Sum_probs=34.6
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+.+++++.|+.|.+ .|+.|+||||-+...++.+...+
T Consensus 143 ~~~~~~~~l~~~l~~-~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLME-NGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHhhc
Confidence 577899999999997 79999999999999999998875
No 279
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=28.07 E-value=2.2e+02 Score=24.58 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=45.1
Q ss_pred CHHHHHHHHHH--ccEEEECCCCcCCChhHHHHHhhcCC-CCceEEEeCCCCchhh---c--cCCeEEECCC-CHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLRDGMNLVSYEFVACQDL-KKGVLILSEFAGAAQS---L--GAGAILVNPW-NITEVAN 519 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~EG~~Lv~lEama~~~~-~~g~lVlSe~aG~~~~---l--g~~g~lVnP~-d~~~lA~ 519 (856)
+.++...++.. .|+++ +-+.-|+-.++.+-.. . ...++++|........ + |..+++.-|. +.+++..
T Consensus 50 ~~~~al~~l~~~~~dlvi---~~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~ 125 (137)
T 2pln_A 50 SLEDGEYLMDIRNYDLVM---VSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVA 125 (137)
T ss_dssp CHHHHHHHHHHSCCSEEE---ECSTTHHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEE---EcCccHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHH
Confidence 34555554443 47777 2233345556666543 2 2345556665433222 2 6678999999 9999999
Q ss_pred HHHHHHc
Q 003029 520 AIARALN 526 (856)
Q Consensus 520 ai~~aL~ 526 (856)
+|..++.
T Consensus 126 ~i~~~~~ 132 (137)
T 2pln_A 126 RIEARLR 132 (137)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9999985
No 280
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.86 E-value=1.3e+02 Score=25.92 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=45.8
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCC-CHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPW-NITEVAN 519 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~-d~~~lA~ 519 (856)
+.++...+++. .|++++-.. -+.-|+-.++.+........++++|........ + |..+++.-|. +.+.+..
T Consensus 39 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~ 118 (130)
T 3eod_A 39 DGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLRE 118 (130)
T ss_dssp CHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHH
Confidence 44555555433 466666432 344466667766654333345566665544321 2 7789999999 9999999
Q ss_pred HHHHHHc
Q 003029 520 AIARALN 526 (856)
Q Consensus 520 ai~~aL~ 526 (856)
+|..++.
T Consensus 119 ~i~~~l~ 125 (130)
T 3eod_A 119 MVFACLY 125 (130)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999986
No 281
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=27.86 E-value=59 Score=36.34 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=52.2
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCC---------C-C--------cccc--------ccccCCChhHHHHHHHhhc
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGR---------R-G--------DQIR--------EMELKLHPDLKQPLNALCH 636 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~---------~-~--------~~~~--------~~~~~~s~~~~~~L~~L~~ 636 (856)
.++...+++..+++|+|.||+...-.|-. . . -+++ ...-..-|-+.+.|+.+++
T Consensus 18 ~~rll~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~ 97 (442)
T 3ef1_A 18 VKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISE 97 (442)
T ss_dssp HHHHHHTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTT
T ss_pred HHHHHhcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhC
Confidence 34456678888999999999976443310 0 0 0000 0112334678999999984
Q ss_pred CCCCeEEEEcCCCHhhHHHHhccc
Q 003029 637 DPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 637 d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
...|+|.|.-........+..+
T Consensus 98 --~yEivIfTas~~~YA~~Vl~~L 119 (442)
T 3ef1_A 98 --LYELHIYTMGTKAYAKEVAKII 119 (442)
T ss_dssp --TEEEEEECSSCHHHHHHHHHHH
T ss_pred --CcEEEEEcCCCHHHHHHHHHHh
Confidence 8999999999999888887776
No 282
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=27.68 E-value=1.2e+02 Score=26.48 Aligned_cols=67 Identities=9% Similarity=0.209 Sum_probs=42.4
Q ss_pred ccEEEECC-CCc--CCChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 460 TDVALVTS-LRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 460 ADv~v~~S-~~E--G~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
.|++++-. +-+ .-|+-.++.+-.......++++|....... .+ |..+++.-|.+.+++..+|.+++.
T Consensus 51 ~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 51 AIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp EEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHHHH
T ss_pred CCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHHHh
Confidence 36655533 233 345566666654332334566676554322 22 677999999999999999999875
No 283
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=27.42 E-value=1.2e+02 Score=26.24 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=42.3
Q ss_pred HccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCch---hhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 459 VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAA---QSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 459 ~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~---~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
..|+.++-.. -+.-|+-.++.+-.......++++|...... ..+ |..+++.-|.+.+++.++|..++.
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHC
Confidence 3577666443 3444566666665433223355566554322 222 677899999999999999999985
No 284
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=26.80 E-value=1.9e+02 Score=25.06 Aligned_cols=79 Identities=13% Similarity=0.104 Sum_probs=48.1
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhc--CCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQ--DLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~--~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA 518 (856)
+.++...+++. .|++++-... +.-|+-.++.+... .....++++|........ + |..+++.-|.+.+++.
T Consensus 42 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~ 121 (143)
T 3cnb_A 42 NPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLE 121 (143)
T ss_dssp SHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHH
Confidence 34555555543 4777665433 33455666666542 112234556665543321 2 6678999999999999
Q ss_pred HHHHHHHcC
Q 003029 519 NAIARALNM 527 (856)
Q Consensus 519 ~ai~~aL~~ 527 (856)
.+|..++..
T Consensus 122 ~~i~~~~~~ 130 (143)
T 3cnb_A 122 KTIKQLVEQ 130 (143)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999863
No 285
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=26.65 E-value=61 Score=39.66 Aligned_cols=72 Identities=8% Similarity=0.105 Sum_probs=52.8
Q ss_pred hHHHHHHHHhcCCeEEEEecCC-------------ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEE
Q 003029 579 EADSIERYLRSNNRLLILGFNA-------------TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (856)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DG-------------TL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~ 645 (856)
.....+.|.+...|.+++-++- +++--. ....++-+++.++|++|.+ .|+.|+++
T Consensus 443 ~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli-----------~i~Dp~R~~a~~aI~~l~~-aGI~v~Mi 510 (885)
T 3b8c_A 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL-----------PLFDPPRHDSAETIRRALN-LGVNVKMI 510 (885)
T ss_dssp HHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEE-----------EECCCCCHHHHHHHHHHHH-TTCCCEEE
T ss_pred HHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEE-----------EeecccchhHHHHHHHHHH-cCCcEEEE
Confidence 4455667777778988887751 211100 1233578899999999986 79999999
Q ss_pred cCCCHhhHHHHhcccCc
Q 003029 646 SGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 646 SGR~~~~l~~~~~~l~l 662 (856)
||...........++++
T Consensus 511 TGD~~~tA~~iA~~lGi 527 (885)
T 3b8c_A 511 TGDQLAIGKETGRRLGM 527 (885)
T ss_dssp ESSCHHHHTHHHHTTTC
T ss_pred cCCChHHHHHHHHHhCC
Confidence 99999998888887764
No 286
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=26.59 E-value=1e+02 Score=26.84 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=47.2
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+.++...+++. .|++++-.. -+.-|+-.++.+-.......++++|........ + |..+++.-|.+.+++.++
T Consensus 39 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 118 (137)
T 3hdg_A 39 DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMET 118 (137)
T ss_dssp SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHH
Confidence 34555444433 477776543 344456666666543222234445555442221 2 678899999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|.+++.
T Consensus 119 i~~~~~ 124 (137)
T 3hdg_A 119 LEDFRH 124 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999984
No 287
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=26.47 E-value=1.5e+02 Score=25.61 Aligned_cols=78 Identities=18% Similarity=0.100 Sum_probs=46.5
Q ss_pred CHHHHHHHHHH--ccEEEECCCCcC-CChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~EG-~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...++.. .|++++--.-.+ -|+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 35 ~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 114 (132)
T 3crn_A 35 TAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIMKPVNPRDLLEK 114 (132)
T ss_dssp SHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhccCCCCHHHHHHH
Confidence 34455554443 477776433222 345555655432222345566766543322 2 677999999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 115 i~~~~~ 120 (132)
T 3crn_A 115 IKEKLD 120 (132)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998873
No 288
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=26.43 E-value=2e+02 Score=25.23 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=47.9
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhh--cCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVAC--QDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~--~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA 518 (856)
+.++...+++. .|++++-.. -+.-|+-.++.+.. ......++++|........ + |..+++.-|.+.+++.
T Consensus 40 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~ 119 (147)
T 2zay_A 40 NAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLS 119 (147)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHH
Confidence 34555444443 577766433 33345666666654 1122334556665543322 2 6779999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|..++.
T Consensus 120 ~~i~~~~~ 127 (147)
T 2zay_A 120 ARIKRVLK 127 (147)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 289
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=26.10 E-value=1e+02 Score=27.31 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=41.5
Q ss_pred HccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 459 VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 459 ~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
..|++++--. -+.-|+-.++.+-.......++++|........ + |..+++.-|.+.+++..+|..++.
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 3566665432 233345555555433222345566665543322 2 556899999999999999999985
No 290
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=26.05 E-value=1.9e+02 Score=24.94 Aligned_cols=79 Identities=8% Similarity=0.154 Sum_probs=47.8
Q ss_pred CHHHHHHHHHH---ccEEEECCC-CcCCChhHHHHHhhcC-CCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV---TDVALVTSL-RDGMNLVSYEFVACQD-LKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~---ADv~v~~S~-~EG~~Lv~lEama~~~-~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA 518 (856)
+..+....+.. .|++++-.. -+.-|+..++.+-... ....++++|........ + |..+++.-|.+.+++.
T Consensus 39 ~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 118 (136)
T 3hdv_A 39 GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLL 118 (136)
T ss_dssp SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHH
Confidence 34444444432 466665433 3445566677665431 22234556655543222 2 6778999999999999
Q ss_pred HHHHHHHcC
Q 003029 519 NAIARALNM 527 (856)
Q Consensus 519 ~ai~~aL~~ 527 (856)
.+|.+++.-
T Consensus 119 ~~i~~~~~~ 127 (136)
T 3hdv_A 119 ELVNKELKI 127 (136)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhcC
Confidence 999999864
No 291
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=25.80 E-value=3.6e+02 Score=25.06 Aligned_cols=67 Identities=13% Similarity=0.237 Sum_probs=41.2
Q ss_pred HccEEEECCCCcCC-ChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 459 VTDVALVTSLRDGM-NLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 459 ~ADv~v~~S~~EG~-~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
..|++++--...|+ |+ ..+.+........++++|........ + |..+++.-|.+.+++..+|..++.
T Consensus 52 ~~dlvl~D~~mp~~~g~-l~~~~~~~~~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~ 124 (196)
T 1qo0_D 52 PVDVVFTSIFQNRHHDE-IAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARR 124 (196)
T ss_dssp CCSEEEEECCSSTHHHH-HHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred CCCEEEEeCCCCccchH-HHHHHhccCCCCCEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHH
Confidence 45777664433444 34 45554432122234556665543221 2 678999999999999999999885
No 292
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.74 E-value=1.6e+02 Score=25.84 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=47.2
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhc--CCCCceEEEeCCCCchhh---c--cCCeEEECCC-CHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQ--DLKKGVLILSEFAGAAQS---L--GAGAILVNPW-NITEV 517 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~--~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~-d~~~l 517 (856)
+.++...++.. .|++++-.. -+.-|+-.++.+-.. ...-.++++|........ + |..+++.-|. +.+++
T Consensus 39 ~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l 118 (144)
T 3kht_A 39 NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDF 118 (144)
T ss_dssp SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHH
T ss_pred CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHH
Confidence 34555555443 466666443 334456666666541 112234556655443322 2 6779999999 99999
Q ss_pred HHHHHHHHc
Q 003029 518 ANAIARALN 526 (856)
Q Consensus 518 A~ai~~aL~ 526 (856)
.++|..++.
T Consensus 119 ~~~i~~~l~ 127 (144)
T 3kht_A 119 YGRIYAIFS 127 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999984
No 293
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=25.37 E-value=2.2e+02 Score=24.53 Aligned_cols=79 Identities=16% Similarity=0.146 Sum_probs=46.6
Q ss_pred HHHHHHHHH--HccEEEECCCCcC-CChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHHHHH
Q 003029 450 FPALCALYA--VTDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANAI 521 (856)
Q Consensus 450 ~~el~aly~--~ADv~v~~S~~EG-~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA~ai 521 (856)
..+...++. ..|++++-....+ -|+-.++.+........++++|....... .+ |..+++.-|.+.+++..+|
T Consensus 36 ~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 115 (136)
T 1mvo_A 36 GEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARV 115 (136)
T ss_dssp HHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEECCCCHHHHHHHH
Confidence 344444443 2577766433323 34555666554322233455665443322 22 6678999999999999999
Q ss_pred HHHHcCC
Q 003029 522 ARALNMS 528 (856)
Q Consensus 522 ~~aL~~~ 528 (856)
..++...
T Consensus 116 ~~~~~~~ 122 (136)
T 1mvo_A 116 KAILRRS 122 (136)
T ss_dssp HHHHHTC
T ss_pred HHHHHhh
Confidence 9988643
No 294
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.11 E-value=1.8e+02 Score=25.46 Aligned_cols=78 Identities=14% Similarity=0.188 Sum_probs=46.0
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...++.. .|++++--.. +.-|+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 36 ~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 115 (137)
T 3cfy_A 36 TGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTS 115 (137)
T ss_dssp SHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHH
Confidence 34444444433 5777664332 33345556665432222234556665443221 2 667899999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 116 i~~~~~ 121 (137)
T 3cfy_A 116 VALHLK 121 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998874
No 295
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=24.82 E-value=1.2e+02 Score=26.52 Aligned_cols=67 Identities=13% Similarity=0.049 Sum_probs=40.2
Q ss_pred ccEEEECC-CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 460 TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 460 ADv~v~~S-~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
.|++++-. +-+.=|+-.++.+-.......++++|........ + |..+++.-|.+++++..+|..++.
T Consensus 60 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 60 PGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVTFHDT 132 (135)
T ss_dssp CSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTC-
T ss_pred CCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHHHHhc
Confidence 46655432 2233344455555543323345566665543322 2 677999999999999999998875
No 296
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=23.81 E-value=2.5e+02 Score=23.49 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=45.5
Q ss_pred CHHHHHHHHHH--ccEEEECCCCcC-CChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~EG-~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...+... .|++++--...+ -|+-.++.+... ....++++|........ + |..+++.-|.+.+++..+
T Consensus 34 ~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 112 (122)
T 1zgz_A 34 SGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRER-STVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVR 112 (122)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTT-CCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhc-CCCCEEEEECCCChhhHHHHHHhCHHHHccCCCCHHHHHHH
Confidence 34555555543 577766433323 345555655432 22234556655543221 2 677999999999999999
Q ss_pred HHHHH
Q 003029 521 IARAL 525 (856)
Q Consensus 521 i~~aL 525 (856)
|..++
T Consensus 113 i~~~~ 117 (122)
T 1zgz_A 113 VKNLL 117 (122)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 297
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.57 E-value=1.7e+02 Score=25.73 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=44.5
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCch---hhc--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAA---QSL--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~---~~l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...++.. .|++++--.. +.-|+-.++.+........++++|...... ..+ |..+++.-|.+.+++.++
T Consensus 37 ~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 116 (141)
T 3cu5_A 37 DGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDA 116 (141)
T ss_dssp SHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHH
T ss_pred cHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHH
Confidence 34555554443 4776654322 223455566654322222345566544322 222 567899999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 117 i~~~~~ 122 (141)
T 3cu5_A 117 LKQSIQ 122 (141)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 298
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=23.47 E-value=63 Score=40.06 Aligned_cols=63 Identities=10% Similarity=-0.009 Sum_probs=43.4
Q ss_pred EEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC------Cc-ccc--CCH
Q 003029 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------FL-HYL--RMK 831 (856)
Q Consensus 761 EV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------~~-~~l--~~~ 831 (856)
++.|. +|+.+++.+.++ | +.|+++|| +.||.+| ++.+ +++|.+++. ++ +-| .+.
T Consensus 679 r~~P~--~K~~~v~~l~~~-g---------~~v~~~GD-G~ND~~a-lk~A---dvgiamg~g~~~ak~aAd~vl~~~~~ 741 (995)
T 3ar4_A 679 RVEPS--HKSKIVEYLQSY-D---------EITAMTGD-GVNDAPA-LKKA---EIGIAMGSGTAVAKTASEMVLADDNF 741 (995)
T ss_dssp SCCSS--HHHHHHHHHHTT-T---------CCEEEEEC-SGGGHHH-HHHS---TEEEEETTSCHHHHHTCSEEETTCCH
T ss_pred EeCHH--HHHHHHHHHHHC-C---------CEEEEEcC-CchhHHH-HHHC---CeEEEeCCCCHHHHHhCCEEECCCCH
Confidence 34444 899999988654 3 47999999 9999999 7765 677777643 22 555 345
Q ss_pred HHHHHHHHH
Q 003029 832 MCMRFLSQN 840 (856)
Q Consensus 832 ~~~~~~l~~ 840 (856)
..+.+.++.
T Consensus 742 ~~i~~~i~~ 750 (995)
T 3ar4_A 742 STIVAAVEE 750 (995)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556555543
No 299
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=22.88 E-value=39 Score=36.14 Aligned_cols=47 Identities=15% Similarity=0.030 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-ccccccccccc-ccCcceEEeCCC
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFL-MQTISTVRLDSS 823 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~-~~~~~~v~V~~~ 823 (856)
+-.|..+|.+.++. + ..-++++|| + ..|.+| ++.. ...++.+.|...
T Consensus 239 ~~GK~~~I~~~i~~-g--------~~Pi~a~Gn-s~dgD~~M-L~~~~~~~~~~L~in~~ 287 (327)
T 4as2_A 239 MAGKQAAILTYIDR-W--------KRPILVAGD-TPDSDGYM-LFNGTAENGVHLWVNRK 287 (327)
T ss_dssp THHHHHHHHHHTCS-S--------CCCSEEEES-CHHHHHHH-HHHTSCTTCEEEEECCC
T ss_pred cCccHHHHHHHHhh-C--------CCCeEEecC-CCCCCHHH-HhccccCCCeEEEEecC
Confidence 45677777776522 2 123799999 9 589999 9654 334566666544
No 300
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=22.84 E-value=3.9e+02 Score=23.47 Aligned_cols=77 Identities=10% Similarity=0.032 Sum_probs=46.6
Q ss_pred CHHHHHHHHH---------HccEEEECCCCcCC-ChhHHHHHhhcC--CCCceEEEeCCCCchhh---c--cCCeEEECC
Q 003029 449 DFPALCALYA---------VTDVALVTSLRDGM-NLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAILVNP 511 (856)
Q Consensus 449 ~~~el~aly~---------~ADv~v~~S~~EG~-~Lv~lEama~~~--~~~g~lVlSe~aG~~~~---l--g~~g~lVnP 511 (856)
+..+...+++ ..|++++--...|+ |+-.++.+.... ..-.++++|........ + |..+++.-|
T Consensus 42 ~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP 121 (149)
T 1i3c_A 42 DGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKS 121 (149)
T ss_dssp SHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECC
Confidence 4456666555 35877764433332 455566665421 11234566665543222 2 667999999
Q ss_pred CCHHHHHHHHHHHH
Q 003029 512 WNITEVANAIARAL 525 (856)
Q Consensus 512 ~d~~~lA~ai~~aL 525 (856)
.+.+++..+|..++
T Consensus 122 ~~~~~L~~~i~~~~ 135 (149)
T 1i3c_A 122 RNLKDLFKMVQGIE 135 (149)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998875
No 301
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.73 E-value=2.4e+02 Score=24.14 Aligned_cols=78 Identities=14% Similarity=0.041 Sum_probs=45.2
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcCC--CCceEEEeCCCCchh--hc--cCCeEEECCCCHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDL--KKGVLILSEFAGAAQ--SL--GAGAILVNPWNITEVAN 519 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~~--~~g~lVlSe~aG~~~--~l--g~~g~lVnP~d~~~lA~ 519 (856)
+.++....+.. .|++++-.. -+.=|+-.++.+..... ...++++|....... .+ |..+++.-|.+.+++..
T Consensus 35 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 114 (133)
T 3nhm_A 35 DGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIA 114 (133)
T ss_dssp SHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHH
Confidence 34555444433 466666433 33345556666554311 223455665432221 12 56689999999999999
Q ss_pred HHHHHHc
Q 003029 520 AIARALN 526 (856)
Q Consensus 520 ai~~aL~ 526 (856)
+|..+|.
T Consensus 115 ~i~~~l~ 121 (133)
T 3nhm_A 115 QLHALLA 121 (133)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999985
No 302
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.64 E-value=1.8e+02 Score=25.92 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=44.7
Q ss_pred CHHHHHHHHHH---ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHHH
Q 003029 449 DFPALCALYAV---TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVAN 519 (856)
Q Consensus 449 ~~~el~aly~~---ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA~ 519 (856)
+.++...+++. .|++++--.. +.-|+-.++.+........++++|....... .+ |..+++.-|.+.+++..
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~ 116 (154)
T 2qsj_A 37 TVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIH 116 (154)
T ss_dssp SHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHH
T ss_pred CHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHH
Confidence 45666666655 5777765432 3335666666654322223344454432221 12 66789999999999999
Q ss_pred HHHHHHcC
Q 003029 520 AIARALNM 527 (856)
Q Consensus 520 ai~~aL~~ 527 (856)
+|..++.-
T Consensus 117 ~l~~~~~~ 124 (154)
T 2qsj_A 117 AVSLILEG 124 (154)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999864
No 303
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=22.59 E-value=2.7e+02 Score=23.65 Aligned_cols=78 Identities=12% Similarity=0.164 Sum_probs=46.1
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcC--CCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQD--LKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~--~~~g~lVlSe~aG~~~~l-----g~~g~lVnP~d~~~lA 518 (856)
+.++...+++. .|++++--.. +.=|+-.++.+-... ....++++|......... |..+++.-|.+.+++.
T Consensus 34 ~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~ 113 (122)
T 3gl9_A 34 NGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFI 113 (122)
T ss_dssp SHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHH
Confidence 34454444443 4666654322 333455556554321 112345667655433221 6779999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|.+++.
T Consensus 114 ~~i~~~l~ 121 (122)
T 3gl9_A 114 EEVKHLLN 121 (122)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99998875
No 304
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=22.34 E-value=2.6e+02 Score=23.77 Aligned_cols=80 Identities=13% Similarity=0.064 Sum_probs=48.1
Q ss_pred CHHHHHHHHHH---ccEEEECCCC-c-CCChhHHHHHhhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV---TDVALVTSLR-D-GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~---ADv~v~~S~~-E-G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l---g~~g~lVnP~d~~~lA~a 520 (856)
+.++...+++. .|++++--.. + .-|+-.++.+........++++|......... ..++++.-|.+.+++..+
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~l~kP~~~~~l~~~ 116 (132)
T 2rdm_A 37 SGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALEWASNGVPDSIILEKPFTSAQLITA 116 (132)
T ss_dssp SHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTTHHHHSCTTCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHHHHHhhcCCcceEeCCCCHHHHHHH
Confidence 44555555553 5777764332 2 34455666665432223455566554332222 235799999999999999
Q ss_pred HHHHHcCC
Q 003029 521 IARALNMS 528 (856)
Q Consensus 521 i~~aL~~~ 528 (856)
|.+++.-.
T Consensus 117 i~~~~~~~ 124 (132)
T 2rdm_A 117 VSQLLNAR 124 (132)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99988643
No 305
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=22.03 E-value=2.2e+02 Score=23.99 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=45.4
Q ss_pred CHHHHHHHHH--HccEEEECCCCcC-CChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYA--VTDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~--~ADv~v~~S~~EG-~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+.++...+++ ..|+.++--.-.+ -|+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 35 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1srr_A 35 NGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDA 114 (124)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHH
Confidence 3344444443 3577766433222 345555555432222334556665443221 2 667899999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|.+++.
T Consensus 115 i~~~~~ 120 (124)
T 1srr_A 115 VKKYLP 120 (124)
T ss_dssp HHHHSC
T ss_pred HHHHhc
Confidence 998875
No 306
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=21.53 E-value=2.8e+02 Score=24.67 Aligned_cols=78 Identities=15% Similarity=0.223 Sum_probs=47.5
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcC--CCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~--~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA 518 (856)
+.++...++.. .|++++-.. -+.-|+-.++.+-... ..-.++++|........ + |..+++.-|.+.+++.
T Consensus 39 ~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 118 (154)
T 3gt7_A 39 NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLA 118 (154)
T ss_dssp SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHH
Confidence 44555555443 466666433 3444566666665432 11234556654443322 2 6789999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|..++.
T Consensus 119 ~~i~~~l~ 126 (154)
T 3gt7_A 119 SHVKRLLS 126 (154)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 307
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=21.46 E-value=3.3e+02 Score=23.66 Aligned_cols=77 Identities=12% Similarity=-0.011 Sum_probs=48.2
Q ss_pred CHHHHHHHHHH---ccEEEECCCC-c-CCChhHHHHHhhcCCCCceEEEeCCCCch---hhc--cCCeEEECCCCHHHHH
Q 003029 449 DFPALCALYAV---TDVALVTSLR-D-GMNLVSYEFVACQDLKKGVLILSEFAGAA---QSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 449 ~~~el~aly~~---ADv~v~~S~~-E-G~~Lv~lEama~~~~~~g~lVlSe~aG~~---~~l--g~~g~lVnP~d~~~lA 518 (856)
+..+...++.. .|++++-... + .-|+-.++.+-..+ .-.++++|...... ..+ |..+++.-|.+.+++.
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~-~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 115 (140)
T 3h5i_A 37 TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQIS-ELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLI 115 (140)
T ss_dssp SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHC-CCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHH
T ss_pred ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCC-CCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHH
Confidence 45566665543 4777765433 4 34566666665432 23355566544322 222 5668999999999999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
.+|..++.
T Consensus 116 ~~i~~~l~ 123 (140)
T 3h5i_A 116 TIVEMALR 123 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999984
No 308
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=21.11 E-value=25 Score=35.71 Aligned_cols=59 Identities=3% Similarity=-0.081 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccccCc-ceEEeCCC-------------CccccCCHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLMQTI-STVRLDSS-------------FLHYLRMKMC 833 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~~~~-~~v~V~~~-------------~~~~l~~~~~ 833 (856)
+....+.+++++ +++.+++||| + .+|+.+ -+ ..| .+|.|... +.|.+.+..+
T Consensus 189 ~~~~~~~~~~~~--------~~~~~~~VGD-~~~~Di~~-A~---~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~e 255 (263)
T 1zjj_A 189 NEPMYEVVREMF--------PGEELWMVGD-RLDTDIAF-AK---KFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYE 255 (263)
T ss_dssp SHHHHHHHHHHS--------TTCEEEEEES-CTTTHHHH-HH---HTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGG
T ss_pred CHHHHHHHHHhC--------CcccEEEECC-ChHHHHHH-HH---HcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHH
Confidence 455666777762 4789999999 9 499887 43 334 46777321 2277778777
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 256 l~~~l~~ 262 (263)
T 1zjj_A 256 LIDYLKT 262 (263)
T ss_dssp GGGGGC-
T ss_pred HHHHHhh
Confidence 7766544
No 309
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=20.89 E-value=2.5e+02 Score=23.58 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=45.7
Q ss_pred CHHHHHHHHHH--ccEEEECCCCcC-CChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~EG-~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...++.. .|++++--...+ -|+-.++.+-.. ....++++|........ + |..+++.-|.+.+++..+
T Consensus 35 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 113 (123)
T 1xhf_A 35 DGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQ-ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIR 113 (123)
T ss_dssp SHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHH-CCCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhC-CCCcEEEEECCCChHHHHHHHhcCcceEEeCCCCHHHHHHH
Confidence 33454444443 477766443322 345555555432 22344556665543322 2 677999999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 114 i~~~~~ 119 (123)
T 1xhf_A 114 ARNLLS 119 (123)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 310
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.84 E-value=1.7e+02 Score=25.59 Aligned_cols=79 Identities=11% Similarity=0.176 Sum_probs=46.0
Q ss_pred CHHHHHHHHHH--ccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAI 521 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai 521 (856)
+..+...+++. .|++++-..-+.-|+-.++.+........++++|........ + |..+++.-|.+.+++..+|
T Consensus 36 ~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i 115 (142)
T 2qxy_A 36 NEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERV 115 (142)
T ss_dssp SHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHH
Confidence 34555555443 467666442222234444544432222334556665543222 2 6678999999999999999
Q ss_pred HHHHcC
Q 003029 522 ARALNM 527 (856)
Q Consensus 522 ~~aL~~ 527 (856)
..++..
T Consensus 116 ~~~~~~ 121 (142)
T 2qxy_A 116 KKIISS 121 (142)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 999864
No 311
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=20.80 E-value=1.7e+02 Score=26.12 Aligned_cols=79 Identities=19% Similarity=0.213 Sum_probs=48.4
Q ss_pred CHHHHHHHHHH--ccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...++.. .|++++--. -+.-|+-.++.+........++++|........ + |..+++.-|.+.+++..+
T Consensus 39 ~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 118 (153)
T 3cz5_A 39 DAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQA 118 (153)
T ss_dssp SHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHH
Confidence 44555555543 477666433 233345556665543222345666665543322 1 667899999999999999
Q ss_pred HHHHHcC
Q 003029 521 IARALNM 527 (856)
Q Consensus 521 i~~aL~~ 527 (856)
|..++..
T Consensus 119 i~~~~~~ 125 (153)
T 3cz5_A 119 IEAILAG 125 (153)
T ss_dssp HHHHTTT
T ss_pred HHHHHhC
Confidence 9999863
No 312
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=20.53 E-value=3e+02 Score=23.44 Aligned_cols=79 Identities=10% Similarity=0.048 Sum_probs=46.1
Q ss_pred CHHHHHHHHH--HccEEEECCC-CcCCChhHHHHHhhcCC-CCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHHH
Q 003029 449 DFPALCALYA--VTDVALVTSL-RDGMNLVSYEFVACQDL-KKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVAN 519 (856)
Q Consensus 449 ~~~el~aly~--~ADv~v~~S~-~EG~~Lv~lEama~~~~-~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA~ 519 (856)
+.++....++ ..|++++-.. -+.-|+-.++.+-.... ...++|++....... .+ |..+++.-|.+.+++.+
T Consensus 38 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~ 117 (132)
T 3lte_A 38 NGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFDNDALLD 117 (132)
T ss_dssp SHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCCHHHHHH
Confidence 3445544443 2466665433 34445666776654321 223444443322222 12 67789999999999999
Q ss_pred HHHHHHcC
Q 003029 520 AIARALNM 527 (856)
Q Consensus 520 ai~~aL~~ 527 (856)
+|.+.+.-
T Consensus 118 ~i~~~~~~ 125 (132)
T 3lte_A 118 RIHDLVNE 125 (132)
T ss_dssp HHHHHHC-
T ss_pred HHHHHcCC
Confidence 99998863
No 313
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=20.44 E-value=2.6e+02 Score=27.56 Aligned_cols=67 Identities=12% Similarity=0.235 Sum_probs=41.5
Q ss_pred ccEEEECC-CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 460 TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 460 ADv~v~~S-~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
.|++++-- +-+.=|+-.++.+-.......++++|......... |..+++.-|.+.+++..+|..++.
T Consensus 68 ~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 68 PDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILR 140 (250)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 45555432 22333455566655432223456677665443322 677999999999999999988873
No 314
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=20.28 E-value=1.1e+02 Score=26.83 Aligned_cols=77 Identities=12% Similarity=0.163 Sum_probs=46.0
Q ss_pred CHHHHHHHHHH--ccEEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~--ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~---~l--g~~g~lVnP~d~~~lA~a 520 (856)
+..+...++.. .|++++--.. +.-|+-.++.+.... ...++++|....... .+ |..+++.-|.+.+++..+
T Consensus 36 ~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~-~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 114 (136)
T 2qzj_A 36 NCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVT-TCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAK 114 (136)
T ss_dssp SHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTC-CCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCC-CCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 34555554443 4776654322 223455566654322 234556666554322 22 667999999999999999
Q ss_pred HHHHHc
Q 003029 521 IARALN 526 (856)
Q Consensus 521 i~~aL~ 526 (856)
|..++.
T Consensus 115 l~~~~~ 120 (136)
T 2qzj_A 115 VKAILR 120 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998874
No 315
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=20.22 E-value=3.5e+02 Score=23.04 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=43.0
Q ss_pred ccEEEECCCC-cCCChhHHHHHhhcC--CCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHHHHHHHHHHcC
Q 003029 460 TDVALVTSLR-DGMNLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 460 ADv~v~~S~~-EG~~Lv~lEama~~~--~~~g~lVlSe~aG~~~~---l--g~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
.|++++--.. +.=|+-.++.+-... ..-.++++|........ + |..+++.-|.+++++.++|..++..
T Consensus 52 ~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 52 TKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp CCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 5777654332 333556666665321 12234556665544322 2 6779999999999999999999863
Done!