Query 003030
Match_columns 855
No_of_seqs 238 out of 364
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 10:45:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qwo_B Putative tyrosine-prote 99.9 5.2E-25 1.8E-29 197.4 6.6 90 760-853 1-91 (92)
2 3ag7_A Putative uncharacterize 99.9 1E-22 3.5E-27 185.8 9.0 97 757-853 6-102 (106)
3 1n4c_A Auxilin; four helix bun 99.8 3.8E-20 1.3E-24 183.6 12.0 93 757-853 82-175 (182)
4 2ys8_A RAB-related GTP-binding 98.7 5.5E-09 1.9E-13 92.0 3.9 55 791-853 27-81 (90)
5 1wjz_A 1700030A21RIK protein; 98.7 1.7E-08 5.8E-13 88.4 5.5 61 792-853 17-77 (94)
6 2dn9_A DNAJ homolog subfamily 98.5 4.8E-08 1.6E-12 83.2 4.5 53 794-853 10-62 (79)
7 1iur_A KIAA0730 protein; DNAJ 98.5 3.8E-08 1.3E-12 87.3 3.8 53 796-854 21-73 (88)
8 1hdj_A Human HSP40, HDJ-1; mol 98.5 5.7E-08 2E-12 82.5 4.6 52 794-853 6-57 (77)
9 2cug_A Mkiaa0962 protein; DNAJ 98.5 7.6E-08 2.6E-12 84.1 4.8 54 792-853 18-71 (88)
10 2yua_A Williams-beuren syndrom 98.5 7.8E-08 2.7E-12 85.8 4.8 53 794-853 20-72 (99)
11 2ej7_A HCG3 gene; HCG3 protein 98.5 1.2E-07 4E-12 81.3 5.4 54 794-853 12-65 (82)
12 2dmx_A DNAJ homolog subfamily 98.5 9.3E-08 3.2E-12 83.9 4.5 54 794-853 12-65 (92)
13 2ctp_A DNAJ homolog subfamily 98.4 7.8E-08 2.7E-12 81.9 3.4 52 794-853 10-61 (78)
14 2ctr_A DNAJ homolog subfamily 98.4 8.7E-08 3E-12 83.7 3.6 52 794-853 10-61 (88)
15 2ctq_A DNAJ homolog subfamily 98.4 1.6E-07 5.6E-12 85.6 4.9 55 792-853 21-75 (112)
16 2ctw_A DNAJ homolog subfamily 98.4 1.5E-07 5E-12 85.6 4.2 55 792-853 18-72 (109)
17 2qsa_A DNAJ homolog DNJ-2; J-d 98.4 2.8E-07 9.7E-12 83.2 5.6 58 792-853 16-74 (109)
18 2lgw_A DNAJ homolog subfamily 98.4 2.8E-07 9.4E-12 82.9 5.1 54 794-853 5-58 (99)
19 3bvo_A CO-chaperone protein HS 98.4 2.2E-07 7.5E-12 93.6 4.6 86 766-853 11-105 (207)
20 1bq0_A DNAJ, HSP40; chaperone, 98.4 1.3E-07 4.4E-12 84.8 2.6 54 793-853 5-58 (103)
21 2och_A Hypothetical protein DN 98.3 2.4E-07 8.1E-12 78.1 3.7 51 793-853 10-60 (73)
22 1faf_A Large T antigen; J doma 98.3 2.5E-07 8.6E-12 80.0 3.8 47 796-853 16-64 (79)
23 2l6l_A DNAJ homolog subfamily 98.3 5.4E-07 1.8E-11 85.9 6.1 59 794-853 13-71 (155)
24 1fpo_A HSC20, chaperone protei 98.3 6.5E-07 2.2E-11 87.6 6.5 55 797-853 7-63 (171)
25 3hho_A CO-chaperone protein HS 98.3 6.6E-07 2.3E-11 87.6 5.2 58 794-853 7-66 (174)
26 2o37_A Protein SIS1; HSP40, J- 98.3 4.5E-07 1.5E-11 79.9 3.6 50 794-853 11-60 (92)
27 2guz_A Mitochondrial import in 98.2 1E-06 3.5E-11 74.6 5.0 48 795-853 18-66 (71)
28 1gh6_A Large T antigen; tumor 98.1 1E-06 3.5E-11 81.5 3.4 46 797-853 14-61 (114)
29 3lz8_A Putative chaperone DNAJ 97.8 2.7E-06 9.2E-11 90.9 0.0 54 792-853 29-82 (329)
30 3uo3_A J-type CO-chaperone JAC 97.8 5.6E-06 1.9E-10 81.9 2.0 42 802-853 29-70 (181)
31 2pf4_E Small T antigen; PP2A, 97.7 1.8E-05 6.2E-10 78.4 3.4 48 795-853 15-64 (174)
32 2guz_B Mitochondrial import in 97.3 0.00023 7.9E-09 60.4 5.0 46 797-853 10-58 (65)
33 3apo_A DNAJ homolog subfamily 97.2 7.1E-05 2.4E-09 85.6 0.5 55 792-853 22-76 (780)
34 3apq_A DNAJ homolog subfamily 96.7 0.0012 4E-08 63.8 4.5 32 795-826 6-37 (210)
35 2y4t_A DNAJ homolog subfamily 96.4 0.0033 1.1E-07 63.8 5.8 57 794-854 385-441 (450)
36 2i1j_A Moesin; FERM, coiled-co 36.6 17 0.00058 41.7 2.9 6 759-764 539-544 (575)
37 2zuo_A MVP, major vault protei 30.4 8.3E+02 0.028 29.9 19.4 25 348-372 463-487 (861)
38 3v6i_B V-type ATP synthase, su 25.6 4.1E+02 0.014 24.7 12.1 78 568-649 14-91 (105)
No 1
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.91 E-value=5.2e-25 Score=197.38 Aligned_cols=90 Identities=32% Similarity=0.514 Sum_probs=83.2
Q ss_pred hhhHHHHhhhhcCCCCcHHHHHhhcccccCCC-CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHH
Q 003030 760 ETLDADVKRWSSGKEGNLRALLSTLQYILGPD-SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICE 838 (855)
Q Consensus 760 d~ld~kI~~W~~GKe~NIRALLSTL~~VLWp~-~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe 838 (855)
|.|+.+|..|+.||++|||+||+|||.|||++ ++|+.|||+.++++.+||+||||+++++||||+++. + ..++|+
T Consensus 1 ~~i~~~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~--~--~~~~A~ 76 (92)
T 2qwo_B 1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQ--P--YEQYAK 76 (92)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTS--T--THHHHH
T ss_pred ChHHHHHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--h--hHhHHH
Confidence 56899999999999999999999999999995 999999999999999999999999999999999842 2 236899
Q ss_pred HHHHHHHHHHHHhhh
Q 003030 839 KVFDLLKVSLLLSCR 853 (855)
Q Consensus 839 ~VF~~LneAwevLk~ 853 (855)
.+|..|++||++|+.
T Consensus 77 ~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 77 MIFMELNDAWSEFEN 91 (92)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999974
No 2
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.87 E-value=1e-22 Score=185.82 Aligned_cols=97 Identities=53% Similarity=0.891 Sum_probs=92.5
Q ss_pred HhHhhhHHHHhhhhcCCCCcHHHHHhhcccccCCCCCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHH
Q 003030 757 RLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYI 836 (855)
Q Consensus 757 ~l~d~ld~kI~~W~~GKe~NIRALLSTL~~VLWp~~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~i 836 (855)
.+++.|+.+|..|+.|+++|||+||++|+.|||++..|..|.+.+.+++.+||++|||+++.+||||++..|++++++++
T Consensus 6 ~~~~~~~~~i~~W~~~~~~~ir~lL~~l~~~l~~~~d~Y~vl~~~~As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~ 85 (106)
T 3ag7_A 6 EEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYM 85 (106)
T ss_dssp HHHHHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTSCCCCCCGGGSCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcccCCHHHHcCCCCCCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999977788999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 003030 837 CEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 837 Ae~VF~~LneAwevLk~ 853 (855)
|...|..|++||++|+.
T Consensus 86 A~~~F~~I~~AYevLsd 102 (106)
T 3ag7_A 86 AEKVFELLQEAWDHFNT 102 (106)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999999975
No 3
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.82 E-value=3.8e-20 Score=183.59 Aligned_cols=93 Identities=32% Similarity=0.531 Sum_probs=84.8
Q ss_pred HhHhhhHHHHhhhhcCCCCcHHHHHhhcccccCC-CCCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHH
Q 003030 757 RLAETLDADVKRWSSGKEGNLRALLSTLQYILGP-DSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKY 835 (855)
Q Consensus 757 ~l~d~ld~kI~~W~~GKe~NIRALLSTL~~VLWp-~~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~ 835 (855)
.-+|.|+..|..|+.|+++|||+||++|++|||+ .+.|..|||...+++.+||++||++++++||||++. .+.+ +
T Consensus 82 ~~~D~l~~~i~~W~~gk~~niRaLLssl~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~--~~~e--~ 157 (182)
T 1n4c_A 82 KEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATG--QPYE--Q 157 (182)
T ss_dssp TCCCTTTHHHHHHHHHHTTCHHHHHHHGGGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSS--CTTH--H
T ss_pred HhccHHHHHHHHHHcccHHHHHHHHHHHHHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCC--cchH--H
Confidence 3468899999999999999999999999999999 589999999999999999999999999999999974 2333 4
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 003030 836 ICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 836 iAe~VF~~LneAwevLk~ 853 (855)
+|..+|..|++||++|+.
T Consensus 158 ~A~~~F~~I~eAYevLsD 175 (182)
T 1n4c_A 158 YAKMIFMELNDAWSEFEN 175 (182)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC
Confidence 899999999999999974
No 4
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=5.5e-09 Score=92.02 Aligned_cols=55 Identities=25% Similarity=0.414 Sum_probs=47.1
Q ss_pred CCCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 791 DSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 791 ~~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.+-|.-|+|...++..+||++||++++.+||||++..+ +...|..|++||++|+.
T Consensus 27 ~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~--------~~~~f~~i~~Ay~~L~d 81 (90)
T 2ys8_A 27 KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--------SEDAFKAVVNARTALLK 81 (90)
T ss_dssp SSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTT--------HHHHHHHHHHHHHHHHH
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcc--------HHHHHHHHHHHHHHHCC
Confidence 34466778888999999999999999999999997533 56789999999999974
No 5
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=98.67 E-value=1.7e-08 Score=88.41 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=53.0
Q ss_pred CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|.-|+|..-++..+||++||++++.+||||++. +.+.+....|...|..|++||++|+.
T Consensus 17 ~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~-~~~~~~~~~~~~~f~~i~~Ay~~L~d 77 (94)
T 1wjz_A 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSA-DVPAGTMEECMQKFIEIDQAWKILGN 77 (94)
T ss_dssp CHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCT-TCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-CCChhhhHHHHHHHHHHHHHHHHHCC
Confidence 34667888889999999999999999999999984 34566677899999999999999974
No 6
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=4.8e-08 Score=83.22 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=45.6
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|..-++..+||++||++++.+|||+++... .|...|..|++||++|+.
T Consensus 10 y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~-------~a~~~f~~i~~Ay~~L~d 62 (79)
T 2dn9_A 10 YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDP-------KAKEKFSQLAEAYEVLSD 62 (79)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCT-------THHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH-------HHHHHHHHHHHHHHHHCC
Confidence 55667778899999999999999999999997432 378899999999999974
No 7
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.53 E-value=3.8e-08 Score=87.25 Aligned_cols=53 Identities=23% Similarity=0.219 Sum_probs=44.2
Q ss_pred cCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhhc
Q 003030 796 PIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRY 854 (855)
Q Consensus 796 pVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~~ 854 (855)
-||+...++..+||++||++++.+||||++.. .-.|...|..|++||++|+..
T Consensus 21 vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~------~~~a~~~F~~I~~AYevL~~~ 73 (88)
T 1iur_A 21 VVEQAWKLPESERKKIIRRLYLKWHPDKNPEN------HDIANEVFKHLQNEINRLEKQ 73 (88)
T ss_dssp HHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHHHHHHHHHHHHhh
Confidence 34566678999999999999999999998642 135889999999999999863
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.53 E-value=5.7e-08 Score=82.51 Aligned_cols=52 Identities=23% Similarity=0.379 Sum_probs=45.3
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|||...++..+||++|+++++.+|||+++.. .+...|..|++||++|+.
T Consensus 6 y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~d 57 (77)
T 1hdj_A 6 YQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--------GAEEKFKEIAEAYDVLSD 57 (77)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--------THHHHHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHCC
Confidence 5567788889999999999999999999998753 267899999999999974
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=98.50 E-value=7.6e-08 Score=84.09 Aligned_cols=54 Identities=22% Similarity=0.293 Sum_probs=47.3
Q ss_pred CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|.-|+|...++..+||++||++++.+||||++.. .+...|..|++||++|+.
T Consensus 18 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~d 71 (88)
T 2cug_A 18 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP--------GAEDRFIQISKAYEILSN 71 (88)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST--------THHHHHHHHHHHHHHHHS
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHHCC
Confidence 456778888899999999999999999999999752 267899999999999974
No 10
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=7.8e-08 Score=85.79 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=46.0
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|...++..+||++||++++.+||||++... .|...|..|++||++|+.
T Consensus 20 Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~~L~d 72 (99)
T 2yua_A 20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSA-------EAAERFTRISQAYVVLGS 72 (99)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCS-------HHHHHHHHHHHHHHHTTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCH-------HHHHHHHHHHHHHHHHCC
Confidence 45678888899999999999999999999997422 377899999999999974
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=1.2e-07 Score=81.30 Aligned_cols=54 Identities=30% Similarity=0.388 Sum_probs=46.1
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|...++..+||++||++++.+||||++.. ...|...|..|++||++|+.
T Consensus 12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~d 65 (82)
T 2ej7_A 12 YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN------KEEAERRFKQVAEAYEVLSD 65 (82)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT------HHHHHHHHHHHHHHHHHHSS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHHHCC
Confidence 4567788889999999999999999999998642 23588999999999999975
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=9.3e-08 Score=83.88 Aligned_cols=54 Identities=28% Similarity=0.369 Sum_probs=46.0
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|..-++..+||++||++++.+||||++... ..|...|..|++||++|+.
T Consensus 12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~------~~a~~~f~~i~~Ay~~L~d 65 (92)
T 2dmx_A 12 YEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNK------EEAEKKFKLVSEAYEVLSD 65 (92)
T ss_dssp HHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCS------HHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccH------HHHHHHHHHHHHHHHHHCC
Confidence 45567777899999999999999999999987421 2588999999999999974
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=7.8e-08 Score=81.86 Aligned_cols=52 Identities=21% Similarity=0.352 Sum_probs=44.4
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|..-++..+||++|+++++.+||||++.. .+...|..|++||++|+.
T Consensus 10 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~d 61 (78)
T 2ctp_A 10 YEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP--------GATEAFKAIGTAYAVLSN 61 (78)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH--------HHHHHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHCC
Confidence 4456677778999999999999999999998642 367899999999999974
No 14
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=8.7e-08 Score=83.69 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=44.8
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|..-++..+||++||++++.+||||++. + .|...|..|++||++|+.
T Consensus 10 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~----~----~a~~~f~~i~~Ay~~L~d 61 (88)
T 2ctr_A 10 YDILGVPKSASERQIKKAFHKLAMKYHPDKNKS----P----DAEAKFREIAEAYETLSD 61 (88)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS----H----HHHHHHHHHHHHHHHHHS
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC----h----HHHHHHHHHHHHHHHHCC
Confidence 455677778999999999999999999999873 1 478899999999999975
No 15
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=1.6e-07 Score=85.57 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=47.6
Q ss_pred CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|.-|+|..-++..+||++||++++.+||||++... .|...|..|++||++|+.
T Consensus 21 d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~vL~d 75 (112)
T 2ctq_A 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENP-------KAVETFQKLQKAKEILTN 75 (112)
T ss_dssp CHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCS-------THHHHHHHHHHHHHHHHS
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHHCC
Confidence 3456788999999999999999999999999997422 378999999999999974
No 16
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.40 E-value=1.5e-07 Score=85.63 Aligned_cols=55 Identities=29% Similarity=0.346 Sum_probs=47.2
Q ss_pred CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|.-|+|..-++..+||++||++++.+||||++.. + .|...|..|++||++|+.
T Consensus 18 ~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~----~a~~~f~~i~~Ay~vL~d 72 (109)
T 2ctw_A 18 SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN---P----EAADKFKEINNAHAILTD 72 (109)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC---H----HHHHHHHHHHHHHHHHTC
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---H----HHHHHHHHHHHHHHHHcC
Confidence 346677888889999999999999999999998742 1 378899999999999974
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=98.38 E-value=2.8e-07 Score=83.22 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=50.0
Q ss_pred CCCccCCccccC-ChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVI-TSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~-tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|.-|||...+ +..+||++||++++.+||||+++ ......|...|..|++||++|+.
T Consensus 16 ~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~----~~~~~~a~~~f~~i~~AY~~L~d 74 (109)
T 2qsa_A 16 NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKN----KEEKLLAEERFRVIATAYETLKD 74 (109)
T ss_dssp CHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCS----HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----ccccHHHHHHHHHHHHHHHHHCC
Confidence 456778888888 99999999999999999999863 34456789999999999999974
No 18
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=98.37 E-value=2.8e-07 Score=82.85 Aligned_cols=54 Identities=26% Similarity=0.380 Sum_probs=45.7
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|..-++..+||++||++++.+||||++.. .-.|...|..|++||++|+.
T Consensus 5 Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~------~~~a~~~f~~I~~AY~vL~d 58 (99)
T 2lgw_A 5 YEILDVPRSASADDIKKAYRRKALQWHPDKNPDN------KEFAEKKFKEVAEAYEVLSD 58 (99)
T ss_dssp HHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC------CHHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc------HHHHHHHHHHHHHHHHHHCC
Confidence 3456788888999999999999999999998742 12588999999999999974
No 19
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.35 E-value=2.2e-07 Score=93.64 Aligned_cols=86 Identities=21% Similarity=0.280 Sum_probs=64.3
Q ss_pred HhhhhcCCC---CcHHHHHhhcccccCC-CC---CCccCCcccc--CChhHHHHHHHHhhhhcCCCcccCCCCchhHHHH
Q 003030 766 VKRWSSGKE---GNLRALLSTLQYILGP-DS---GWHPIPLTEV--ITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYI 836 (855)
Q Consensus 766 I~~W~~GKe---~NIRALLSTL~~VLWp-~~---gWkpVgmsdL--~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~i 836 (855)
...|..|.. -+...++|..-.++.| +. -+.-+||..- +++..||++||++.+.+||||++.. +...+..
T Consensus 11 ~~Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~--~~~e~~~ 88 (207)
T 3bvo_A 11 PRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQR--SQTEKDF 88 (207)
T ss_dssp CBCSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTS--CHHHHHH
T ss_pred CCCCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHH
Confidence 467998875 3445666654444443 32 3445777764 6899999999999999999999753 4455678
Q ss_pred HHHHHHHHHHHHHHhhh
Q 003030 837 CEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 837 Ae~VF~~LneAwevLk~ 853 (855)
|...|..||+||.+|+.
T Consensus 89 a~~~f~~In~AY~vLsd 105 (207)
T 3bvo_A 89 SEKHSTLVNDAYKTLLA 105 (207)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHCC
Confidence 89999999999999984
No 20
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=98.35 E-value=1.3e-07 Score=84.80 Aligned_cols=54 Identities=19% Similarity=0.303 Sum_probs=46.6
Q ss_pred CCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 793 GWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 793 gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
-|.-|+|..-++..+||++||++++.+||||++... .|...|..|++||++|+.
T Consensus 5 ~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~~L~d 58 (103)
T 1bq0_A 5 YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-------EAEAKFKEIKEAYEVLTD 58 (103)
T ss_dssp STTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTC-------THHHHHHHHTTTTTSTTC
T ss_pred HHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHHCC
Confidence 366788888899999999999999999999997432 377899999999999874
No 21
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=98.34 E-value=2.4e-07 Score=78.12 Aligned_cols=51 Identities=24% Similarity=0.327 Sum_probs=43.8
Q ss_pred CCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 793 GWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 793 gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
-|.-|||..-++..+||++|+++++.+||||++.. ...|..|+.||++|+.
T Consensus 10 ~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----------~~~f~~i~~Ay~~L~d 60 (73)
T 2och_A 10 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----------AEQFKQISQAYEVLSD 60 (73)
T ss_dssp HHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----------HHHHHHHHHHHHHHTS
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----------HHHHHHHHHHHHHHCC
Confidence 35667888889999999999999999999998631 3689999999999974
No 22
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=98.33 E-value=2.5e-07 Score=80.02 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=39.3
Q ss_pred cCCcccc--CChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 796 PIPLTEV--ITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 796 pVgmsdL--~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
-|||... ++..+||++||++++.+||||.+ + ...|..|++||++|+.
T Consensus 16 iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~----~-------~~~f~~i~~AYe~L~~ 64 (79)
T 1faf_A 16 LLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG----S-------HALMQELNSLWGTFKT 64 (79)
T ss_dssp HHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC----C-------HHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC----C-------HHHHHHHHHHHHHHhh
Confidence 3455555 89999999999999999999963 1 3579999999999985
No 23
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=98.32 E-value=5.4e-07 Score=85.86 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=49.4
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|||...++..+||++||++++.+||||.+..+ +.+.+..|...|..|++||++|+.
T Consensus 13 y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~-~~~~~~~a~~~f~~i~~Ay~~L~d 71 (155)
T 2l6l_A 13 YSILGADPSANISDLKQKYQKLILMYHPDKQSTDV-PAGTVEECVQKFIEIDQAWKILGN 71 (155)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCC-TTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred hHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-chhHHHHHHHHHHHHHHHHHHcCC
Confidence 44567777889999999999999999999998632 345567889999999999999973
No 24
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.31 E-value=6.5e-07 Score=87.60 Aligned_cols=55 Identities=13% Similarity=0.126 Sum_probs=45.8
Q ss_pred CCccccC--ChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 797 IPLTEVI--TSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 797 VgmsdL~--tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
+|+..-+ ++..||++||++++.+||||+++ .+...+..|...|..||+||.+|+.
T Consensus 7 Lgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~--~~~~e~~~a~~~f~~In~AY~vL~d 63 (171)
T 1fpo_A 7 FGLPARYQLDTQALSLRFQDLQRQYHPDKFAS--GSQAEQLAAVQQSATINQAWQTLRH 63 (171)
T ss_dssp TTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTT--SCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3454444 99999999999999999999985 3455667889999999999999974
No 25
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.25 E-value=6.6e-07 Score=87.65 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=47.1
Q ss_pred CccCCccccCC--hhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVIT--SAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~t--p~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-+||..-++ +..||++||++++.+||||+++ .+...+..|...|..||.||.+|+.
T Consensus 7 Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~--~~~~e~~~a~~~f~~In~AY~vL~d 66 (174)
T 3hho_A 7 FELFGLPIQFELDGSLLSSQFRALQKRFHPDNFAT--ASERDRLMAVQQAAQINDAYQTLKD 66 (174)
T ss_dssp HHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTT--SCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33445555444 9999999999999999999874 3455677899999999999999974
No 26
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=98.25 E-value=4.5e-07 Score=79.92 Aligned_cols=50 Identities=24% Similarity=0.363 Sum_probs=42.6
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|.-|+|..-++..+||++||++++.+||||++.. ...|..|++||++|+.
T Consensus 11 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----------~~~f~~i~~Ay~~L~d 60 (92)
T 2o37_A 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----------TEKFKEISEAFEILND 60 (92)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----------HHHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----------HHHHHHHHHHHHHHCC
Confidence 4556777789999999999999999999998642 2489999999999974
No 27
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.22 E-value=1e-06 Score=74.61 Aligned_cols=48 Identities=29% Similarity=0.292 Sum_probs=40.0
Q ss_pred ccCCccc-cCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 795 HPIPLTE-VITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 795 kpVgmsd-L~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|||.. -++..+||++||++++.+||||. | ++ ..|..|++||++|+.
T Consensus 18 ~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g-~~-------~~f~~i~~Aye~L~~ 66 (71)
T 2guz_A 18 QILNLTENTLTKKKLKEVHRKIMLANHPDKG---G-SP-------FLATKINEAKDFLEK 66 (71)
T ss_dssp HHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---C-CH-------HHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---C-CH-------HHHHHHHHHHHHHhh
Confidence 3456766 68999999999999999999994 2 22 489999999999975
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=98.13 E-value=1e-06 Score=81.53 Aligned_cols=46 Identities=22% Similarity=0.185 Sum_probs=39.5
Q ss_pred CCccccCCh--hHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 797 IPLTEVITS--AAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 797 VgmsdL~tp--~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|||...++. .+||++||++++.+||||++. ...|..|+.||++|+.
T Consensus 14 Lgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----------~e~f~~I~~AYevL~d 61 (114)
T 1gh6_A 14 LGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED 61 (114)
T ss_dssp TTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----------TTTTHHHHHHHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----------HHHHHHHHHHHHHHCC
Confidence 567777777 999999999999999999753 2579999999999974
No 29
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=97.81 E-value=2.7e-06 Score=90.90 Aligned_cols=54 Identities=19% Similarity=0.168 Sum_probs=0.0
Q ss_pred CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-|.-|+|..-++..+||+|||++++.+||||++.. .|...|..|++||++|+.
T Consensus 29 d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--------~a~~~f~~i~~Ay~vL~d 82 (329)
T 3lz8_A 29 DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--------DAEAKFKDLAEAWEVLKD 82 (329)
T ss_dssp --------------------------------------------------------------
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------HHHHHHHHHHHHHHHhhh
Confidence 457788999999999999999999999999998742 377889999999999974
No 30
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=97.79 E-value=5.6e-06 Score=81.90 Aligned_cols=42 Identities=24% Similarity=0.248 Sum_probs=37.4
Q ss_pred cCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 802 VITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 802 L~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
-+++..||++||++++.+||||++. |...|..|++||.+|+.
T Consensus 29 ~a~~~eIk~aYr~la~~~HPDk~~~----------a~~~f~~i~~AY~vL~d 70 (181)
T 3uo3_A 29 TIDQSRLRKEYRQLQAQHHPDMAQQ----------GSEQSSTLNQAYHTLKD 70 (181)
T ss_dssp CCCHHHHHHHHHHHHHTCCTTSCCS----------CSSGGGSHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHhCcCCCcc----------HHHHHHHHHHHHHHHcC
Confidence 6789999999999999999999874 34679999999999974
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=97.67 E-value=1.8e-05 Score=78.36 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=37.4
Q ss_pred ccCCccccCC--hhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 795 HPIPLTEVIT--SAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 795 kpVgmsdL~t--p~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
.-||+...++ ..+||++||++++.+||||++. ...|..|++||++|+.
T Consensus 15 ~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----------~e~F~~I~~AYevLsd 64 (174)
T 2pf4_E 15 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED 64 (174)
T ss_dssp HTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----------CTTTTHHHHHHHHHHH
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----------HHHHHHHHHHHHHhCC
Confidence 3456777776 5999999999999999999753 1579999999999974
No 32
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.00023 Score=60.37 Aligned_cols=46 Identities=7% Similarity=-0.052 Sum_probs=35.8
Q ss_pred CCcccc---CChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 797 IPLTEV---ITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 797 VgmsdL---~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
|||.+. ++...|+++||+++...||||.. |+ -++..|+.|+++|..
T Consensus 10 Lgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG----S~-------yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 10 LNIEESKGDLNMDKINNRFNYLFEVNDKEKGG----SF-------YLQSKVYRAAERLKW 58 (65)
T ss_dssp TTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC----CH-------HHHHHHHHHHHHHHH
T ss_pred hCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC----CH-------HHHHHHHHHHHHHHH
Confidence 556666 88999999999999999999942 32 455667788888753
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.16 E-value=7.1e-05 Score=85.63 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=28.0
Q ss_pred CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030 792 SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR 853 (855)
Q Consensus 792 ~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~ 853 (855)
+-|.-||+..-++..+||++||++++.+||||++... .|...|..|++||++|+.
T Consensus 22 ~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~-------~~~~~f~~i~~ay~~L~~ 76 (780)
T 3apo_A 22 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNP-------NAHGDFLKINRAYEVLKD 76 (780)
T ss_dssp -CHHHHTCCTTCCHHHHHHHHCC------------------------------CTHHHHHHS
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-------HHHHHHHHHHHHHHHHcC
Confidence 4567788999999999999999999999999986422 377889999999999974
No 34
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=96.68 E-value=0.0012 Score=63.81 Aligned_cols=32 Identities=25% Similarity=0.497 Sum_probs=28.0
Q ss_pred ccCCccccCChhHHHHHHHHhhhhcCCCcccC
Q 003030 795 HPIPLTEVITSAAVKKAYRKATLCVHPDKLQQ 826 (855)
Q Consensus 795 kpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~ 826 (855)
.-||+..-++..+||++||++++.+||||++.
T Consensus 6 ~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~ 37 (210)
T 3apq_A 6 SLLGVSKTASSREIRQAFKKLALKLHPDKNPN 37 (210)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC
Confidence 34567778999999999999999999999974
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.40 E-value=0.0033 Score=63.77 Aligned_cols=57 Identities=25% Similarity=0.279 Sum_probs=47.8
Q ss_pred CccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhhc
Q 003030 794 WHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRY 854 (855)
Q Consensus 794 WkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~~ 854 (855)
|.-+|+....+...|+++|+++++..|||+.+. .+.+..|...|..|++||++|+..
T Consensus 385 y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~----~~~~~~a~~~~~~i~~ay~~L~d~ 441 (450)
T 2y4t_A 385 YKILGVKRNAKKQEIIKAYRKLALQWHPDNFQN----EEEKKKAEKKFIDIAAAKEVLSDP 441 (450)
T ss_dssp GGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCS----HHHHHHHHHHHHHHHHHHHHSSGG
T ss_pred HHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCC----chHHHHHHHHHHHHHHHHHHhCCH
Confidence 566677777788999999999999999999863 334667999999999999999764
No 36
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=36.60 E-value=17 Score=41.67 Aligned_cols=6 Identities=0% Similarity=0.263 Sum_probs=2.5
Q ss_pred HhhhHH
Q 003030 759 AETLDA 764 (855)
Q Consensus 759 ~d~ld~ 764 (855)
.|.|+.
T Consensus 539 ~D~lh~ 544 (575)
T 2i1j_A 539 MDKIHR 544 (575)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 444443
No 37
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=30.44 E-value=8.3e+02 Score=29.86 Aligned_cols=25 Identities=24% Similarity=0.161 Sum_probs=16.1
Q ss_pred ccccceeeecccccccccccccccc
Q 003030 348 LEGEAVETTNVLDDRKFEVFGLAHG 372 (855)
Q Consensus 348 ~k~~~v~~~n~~~~e~~~~~e~~~~ 372 (855)
+...+|+++|++-...-.++||...
T Consensus 463 phnaaVqvyDy~~~~~RvvfGP~lv 487 (861)
T 2zuo_A 463 PHNAAVQVYDYRAKRARVVFGPELV 487 (861)
T ss_dssp CTTEEEEEECSSSCCEEEECSSCEE
T ss_pred CCCeEEEEEecCCCceEEEECCcEE
Confidence 3456677777766666666666553
No 38
>3v6i_B V-type ATP synthase, subunit (VAPC-therm); peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_G 3j0j_I
Probab=25.56 E-value=4.1e+02 Score=24.74 Aligned_cols=78 Identities=31% Similarity=0.282 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 003030 568 RERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFD 647 (855)
Q Consensus 568 rerAer~A~eRA~~EArera~aeAreraekaa~ea~~k~~~era~~EAr~kAERaAvErA~aEAr~rA~e~a~~eraa~e 647 (855)
|+++--+-++-|..+|+.... +|...+.++-.+|..+...--+.-..+ ..+.+.|-..++|.+|...|..-+..+.
T Consensus 14 rE~~L~~~lE~Ar~eA~~~v~-~AEAeA~ril~eAe~~a~~l~ae~r~~---~~~Et~ri~~eara~Aeaea~~v~~~A~ 89 (105)
T 3v6i_B 14 KEKQLLERLEAAKKEAEERVK-RAEAEAKALLEEAEAKAKALEAQYRER---ERAETEALLARYRERAEAEAKAVREKAM 89 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hh
Q 003030 648 AR 649 (855)
Q Consensus 648 ar 649 (855)
+|
T Consensus 90 ~r 91 (105)
T 3v6i_B 90 AR 91 (105)
T ss_dssp HH
T ss_pred Hh
Done!