Your job contains 1 sequence.
>003031
MSFNAVIEDVCDDDFEGSRDEHQIFSEVFFRNDPGGTSKRCLVTGVINFEHDDSKISDIL
LCSNSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDESLNAKRMK
FSVDNLTYIKPKSGQVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYL
LKQNVDNSAVDDMDVIKQSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSVTVA
EKSGFAQCAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKR
PSRKYMDTIYRSPEGRLFREFPKVWRVCGENLLADGSNVVPADDGKEWTDINHFHTDLFD
TLINMEKVMCKSNLANELACQWCLLDPFVLVIFIDRKIGSLRKGDVVKAARSFIVDKREK
SDPILALENVSSFETHCSQRDLPVHFDDATLGTKTCPQFDPSVHEVVSSGVTEQSGQSAD
EGRKCIKASGINAEDDYSAADVRLKKKTRRKSRKISEMRLTTLSHSDIQSLTLDIKTEVQ
DADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHLQIAKRGSKFEKTHHDCDGSKN
GQKRPVTCRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPKDDAV
IKDGLVTNNGIICKCCNLVFSVSQFKIHAGFKPNRPCLNLVMESGKPFTLCQLQAWSDEY
KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC
SNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEVG
NKLGQGRVSALPNFS
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003031
(855 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 746 3.4e-146 3
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 515 1.4e-50 3
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 433 5.3e-43 2
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 433 5.5e-43 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 407 2.5e-34 1
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 249 1.7e-19 2
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 187 2.0e-13 1
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 193 4.1e-13 4
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 187 3.5e-12 2
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 192 5.5e-12 2
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 195 8.3e-12 1
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 185 2.6e-11 2
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 185 2.8e-11 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 187 3.9e-11 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 187 1.4e-10 2
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 142 2.8e-10 2
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 155 5.3e-10 1
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 184 7.2e-10 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 183 8.9e-10 1
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 176 8.9e-10 1
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 156 1.2e-09 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 176 1.9e-09 2
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 173 2.2e-09 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 172 2.3e-09 1
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 166 2.6e-09 1
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 183 3.9e-09 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 183 3.9e-09 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 183 4.0e-09 2
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 177 4.5e-09 3
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 183 5.1e-09 2
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 175 6.3e-09 1
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 168 1.0e-08 1
UNIPROTKB|I3LF49 - symbol:I3LF49 "Uncharacterized protein... 159 1.1e-08 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 183 1.3e-08 2
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 142 1.3e-08 1
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 181 1.3e-08 2
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 172 1.4e-08 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 172 1.5e-08 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 181 1.6e-08 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 184 1.7e-08 2
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 183 1.7e-08 2
UNIPROTKB|O15164 - symbol:TRIM24 "Transcription intermedi... 168 1.8e-08 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 171 1.8e-08 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 170 2.3e-08 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 179 2.5e-08 2
UNIPROTKB|F1P5H8 - symbol:TRIM33 "Uncharacterized protein... 161 3.0e-08 2
FB|FBgn0263667 - symbol:Lpt "Lost PHDs of trr" species:72... 176 3.1e-08 2
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 179 3.5e-08 2
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 168 3.6e-08 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 168 3.8e-08 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 168 3.8e-08 1
UNIPROTKB|I3LBT0 - symbol:I3LBT0 "Uncharacterized protein... 159 3.9e-08 2
UNIPROTKB|E1C6X8 - symbol:WHSC1L1 "Uncharacterized protei... 167 3.9e-08 2
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 168 3.9e-08 1
UNIPROTKB|I3LD78 - symbol:I3LD78 "Uncharacterized protein... 159 3.9e-08 2
MGI|MGI:109275 - symbol:Trim24 "tripartite motif-containi... 174 4.5e-08 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 179 4.7e-08 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 163 4.9e-08 1
UNIPROTKB|H0Y9U6 - symbol:WHSC1 "Histone-lysine N-methylt... 154 5.0e-08 1
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 165 5.3e-08 2
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 179 6.4e-08 2
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 179 6.9e-08 2
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 179 7.3e-08 2
UNIPROTKB|E7EN20 - symbol:TRIM33 "E3 ubiquitin-protein li... 157 7.3e-08 2
UNIPROTKB|F1MNE1 - symbol:TRIM33 "Uncharacterized protein... 158 7.6e-08 2
RGD|1307339 - symbol:Trim33 "tripartite motif-containing ... 157 7.7e-08 2
RGD|1307748 - symbol:Nsd1 "nuclear receptor binding SET d... 162 8.5e-08 3
UNIPROTKB|D4AB82 - symbol:Trim24 "Protein Trim24" species... 167 9.6e-08 2
MGI|MGI:2137357 - symbol:Trim33 "tripartite motif-contain... 157 1.0e-07 2
UNIPROTKB|H0Y612 - symbol:TRIM33 "E3 ubiquitin-protein li... 157 1.1e-07 2
UNIPROTKB|F1PLN6 - symbol:TRIM33 "Uncharacterized protein... 155 1.2e-07 2
UNIPROTKB|F1MP49 - symbol:TRIM24 "Uncharacterized protein... 173 1.2e-07 2
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 179 1.2e-07 2
UNIPROTKB|Q9UPN9 - symbol:TRIM33 "E3 ubiquitin-protein li... 157 2.0e-07 2
ZFIN|ZDB-GENE-030131-5913 - symbol:trim24 "tripartite mot... 166 2.0e-07 2
ZFIN|ZDB-GENE-080519-3 - symbol:nsd1a "nuclear receptor b... 160 2.3e-07 2
UNIPROTKB|E2RNG5 - symbol:LOC609728 "Uncharacterized prot... 168 2.5e-07 2
UNIPROTKB|J9NUG7 - symbol:WHSC1 "Uncharacterized protein"... 158 2.9e-07 1
UNIPROTKB|F1PK46 - symbol:WHSC1 "Uncharacterized protein"... 158 2.9e-07 1
UNIPROTKB|J9NVX7 - symbol:NSD1 "Uncharacterized protein" ... 162 3.4e-07 4
UNIPROTKB|J9P6F3 - symbol:WHSC1L1 "Uncharacterized protei... 155 3.4e-07 1
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 172 4.0e-07 2
UNIPROTKB|F1S3C1 - symbol:NSD1 "Uncharacterized protein" ... 162 4.0e-07 4
UNIPROTKB|F1P4C7 - symbol:TRIM24 "Uncharacterized protein... 161 4.9e-07 2
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 155 5.1e-07 2
UNIPROTKB|E2R3Q9 - symbol:NSD1 "Uncharacterized protein" ... 162 5.1e-07 4
UNIPROTKB|E2QUJ0 - symbol:WHSC1L1 "Uncharacterized protei... 155 6.4e-07 1
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 155 6.8e-07 2
ZFIN|ZDB-GENE-030131-2581 - symbol:whsc1 "Wolf-Hirschhorn... 152 7.6e-07 2
UNIPROTKB|F1S8S0 - symbol:WHSC1 "Uncharacterized protein"... 154 7.8e-07 1
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 155 8.4e-07 2
UNIPROTKB|F1N9E9 - symbol:Gga.18314 "Uncharacterized prot... 157 9.6e-07 3
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 155 1.0e-06 2
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 168 1.1e-06 2
UNIPROTKB|F1N972 - symbol:Gga.18314 "Uncharacterized prot... 157 1.1e-06 3
UNIPROTKB|Q96L73 - symbol:NSD1 "Histone-lysine N-methyltr... 162 1.2e-06 4
UNIPROTKB|E1BM66 - symbol:NSD1 "Uncharacterized protein" ... 162 1.2e-06 4
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 155 1.3e-06 2
UNIPROTKB|F1LM99 - symbol:F1LM99 "Uncharacterized protein... 155 1.3e-06 2
UNIPROTKB|E1B7A1 - symbol:PHF12 "Uncharacterized protein"... 155 1.3e-06 2
WARNING: Descriptions of 79 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 746 (267.7 bits), Expect = 3.4e-146, Sum P(3) = 3.4e-146
Identities = 151/307 (49%), Positives = 196/307 (63%)
Query: 552 KEAQKQFLVNAAVQGSQKTPSSLGSCHLQIAKRGSKFEKTHHDCDGSKNGQKRPVTCRI- 610
K+A+K + + + GS T + G R S+ +KT +K R CR+
Sbjct: 545 KKARKHYTQDDDLMGSTITRNK-GKF-----SRSSQKKKTQKPKARTKKRNNRG-GCRLL 597
Query: 611 -KDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPKDDAVIKDGLVTNN 669
+ + + G W + G RTVLSWLI +I+ ++VIQ R+P DD V+K GLVT +
Sbjct: 598 PRSSSNVENHFFQ-GNWSILGPRTVLSWLIATKVISRDEVIQLRDPDDDTVVKTGLVTKD 656
Query: 670 GIICKCCNLVFSVSQFKIHAGFKPNRPCLNLVMESGKPFTLCQLQAWSDEYKSRKSATRA 729
G++C CCN S+S+FK HAGF N PCLNL M SGKPF CQL+AWS EYK+R++ R
Sbjct: 657 GVVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWRL 716
Query: 730 GTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICG 789
+ +DD NDDSCG+CGDGGELICCDNCPS FHQACLS+Q LP GSW+CS+CTCWIC
Sbjct: 717 E--KASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSCTCWICS 774
Query: 790 DLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGA--VSEAWFCNQSCQEVGNKLGQGR 847
+LV+D A S D KCSQC HKYHG CL+ +SK E +FC ++C++V N L R
Sbjct: 775 ELVSDN-AERSQD-FKCSQCAHKYHGTCLQGISKRRKLFPETYFCGKNCEKVYNGLSS-R 831
Query: 848 VSAL-PN 853
V + PN
Sbjct: 832 VGIINPN 838
Score = 561 (202.5 bits), Expect = 3.4e-146, Sum P(3) = 3.4e-146
Identities = 190/545 (34%), Positives = 268/545 (49%)
Query: 75 SSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDESLNAKRMKFSVDNLTYIKPKSG 134
SSKN+N S N+ SG AC E S+ G+D + AKR+K S + + + G
Sbjct: 53 SSKNVNSSLSSNSVVTSGYACPQGF--EASASRDGSDFNTKAKRVKLSGNKHLDARDEKG 110
Query: 135 QVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQN-VDNSAVDDM 193
L P++D T+ LHLVESSN+G+++ YLLK + V V
Sbjct: 111 SALHGF------------PTSDIARETIPLHLVESSNKGVSTSSYLLKHSIVKGREVYLG 158
Query: 194 DVIK---QSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSVTVAEKSGFAQCAA 250
++ +SL LD DGKE KAIASP+SQES ATR+ S +EK+ F
Sbjct: 159 GIVSGKCKSL-NLDKCDGKEF---KAIASPVSQESFATRMISVGASTPHSEKACFP-LQL 213
Query: 251 ETVDRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPS-RKYMDTI 309
+ L S K+D K DPR LL ++ +LTAA W +E+R+R + RK++DT
Sbjct: 214 NNGSKVSPNELIMSKTCLKIDPKEDPRPLLYKYVCKVLTAARWKIEKRERSAGRKHVDTF 273
Query: 310 YRSPEGRLFREFPKVWRVCGENLLADGSNVVPADDG-KEWTDINHFHTDLFDTLINMEKV 368
Y SPEGR FREF W+ G LLAD + D G K+WT IN F +DL TL+++E+
Sbjct: 274 YISPEGRKFREFGSAWKALGGILLADRKLM---DTGTKKWTGINDFWSDLSLTLLDIEEN 330
Query: 369 MCKSNLANELACQWCLLDPFVLVIFIDRKIGSLRKGDVVKAARSFIVDKREKSDPI-LAL 427
M NLAN A W L+PFV+V+FI +++GSLRKG+ V+ AR+ DK +K D I L L
Sbjct: 331 MKNLNLANTRALWWSALEPFVVVVFISKQVGSLRKGNKVEVARNSNPDKLKKEDTICLNL 390
Query: 428 -----ENV-----SSFETHCSQRDLPVHFDDATLGTKTCPQFDPSVHEVVSSGVTEQSGQ 477
E+V S H + +H D + TK Q S E S E SG
Sbjct: 391 ISGCPESVLTVSEGSHLVHDVDANQEIH-SDLEVQTKISSQKVSSRLERQSIIGKEISGT 449
Query: 478 SADEGRKCIKASGINAEDDYSAADVXXXXXXXXXXXXISEMRLTTLS-HSDIQSLTLDIK 536
E K I AS + AED + + IS+++ +L H + S +L+
Sbjct: 450 HEQEASKGIVASKLIAEDMHESV---MRKNLHRRSKKISDIKPASLDQHDSLDSNSLN-S 505
Query: 537 TEVQDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHLQIAKRGSKFEKTHHDCD 596
E QD + + L K ++ + L N + S C+ +K+G K + H+ D
Sbjct: 506 FEFQDKEMGNIHLVSKGSRDERLRNEKMNNS--------CCN---SKKGRKKARKHYTQD 554
Query: 597 GSKNG 601
G
Sbjct: 555 DDLMG 559
Score = 178 (67.7 bits), Expect = 3.4e-146, Sum P(3) = 3.4e-146
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 5 AVIEDVCDDDFEGSRDEHQIFSEVFFRNDPGGTSKRCLVTGVINFEHDDSKISDILLCSN 64
A IE + D FEGS ++HQIF EVFF +DPG T+KRCLVTG INFE D SK + L SN
Sbjct: 5 AEIEMLGGDCFEGSYEDHQIFREVFFGSDPGNTTKRCLVTGAINFECDSSKNVNSSLSSN 64
Query: 65 S 65
S
Sbjct: 65 S 65
Score = 72 (30.4 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 574 LGSCHLQIAK--RGSKF--EKTHHDCDGSKNGQKRPVTCRIKDDDLLGGELIKN 623
+G+ HL ++K R + EK ++ C SK G+K+ +DDDL+G + +N
Sbjct: 513 MGNIHL-VSKGSRDERLRNEKMNNSCCNSKKGRKKARKHYTQDDDLMGSTITRN 565
Score = 41 (19.5 bits), Expect = 7.9e-75, Sum P(2) = 7.9e-75
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 48 NFEHDDSKISDILLCSNSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLE 107
N KISDI S + S+ S S + +D + GSR ER E
Sbjct: 476 NLHRRSKKISDIKPASLDQHDSLDSN-SLNSFEFQDKEMGNIHLVSK-GSR--DERLRNE 531
Query: 108 GGNDESLNAKR 118
N+ N+K+
Sbjct: 532 KMNNSCCNSKK 542
Score = 40 (19.1 bits), Expect = 2.3e-91, Sum P(3) = 2.3e-91
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 107 EGGNDESLNAKRMKFSVDNLTYIKPKSGQVLTSTDILKGT 146
+G DE L ++M S N + K+ + T D L G+
Sbjct: 521 KGSRDERLRNEKMNNSCCNSKKGRKKARKHYTQDDDLMGS 560
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 515 (186.3 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 101/229 (44%), Positives = 132/229 (57%)
Query: 623 NGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPKDDAVIKDGLVTNNGIICKCCNLVFSV 682
NG G RT+LSWLI +G++ L +QY + V+ +G +T GI C CC+ + +V
Sbjct: 509 NGFNPYSGKRTLLSWLIESGVVQLRQKVQYMRRRGAKVMLEGWITREGIHCDCCSKILTV 568
Query: 683 SQFKIHAGFKPNRPCLNLVMESGKPFTLCQLQAWSDEYKSRKSATRAGT--VETDEDDKN 740
S+F+IHAG K +P N+ +ESG CQ++AW+ +K AT V+TD DD N
Sbjct: 569 SRFEIHAGSKSCQPFQNIYLESGASLLQCQVRAWN----MQKDATNLALHQVDTDGDDPN 624
Query: 741 DDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSS 800
DD+CGICGDGG+LICCD CPS +HQ CL +Q LP+G W C NCTC C V +
Sbjct: 625 DDACGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNCTCKFCDAAVASGGKDGN 684
Query: 801 F-DALKCSQCEHKYHGECLKD-----MSKGAVSEAWFCNQSCQEVGNKL 843
F L C CE +YH CL D S G+ S FC C E+ KL
Sbjct: 685 FISLLSCGMCERRYHQLCLNDEAHKVQSFGSASS--FCGPKCLELFEKL 731
Score = 92 (37.4 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 280 LQNHIFNLLTAAGWAVERRKRPSRKYMDTIYRSPEGRLFREFPKVWRVCGENLLADGSNV 339
L+ I +LT AGW ++ + R ++ Y+D +Y +P G + K + + L +G +
Sbjct: 315 LRERIKGMLTDAGWTIDYKPRRNQSYLDAVYVNPSGTAYWSIIKAYDALLKQLKDEGVDA 374
Query: 340 VPADD 344
P D
Sbjct: 375 RPRKD 379
Score = 40 (19.1 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 36/195 (18%), Positives = 70/195 (35%)
Query: 13 DDFEGSRD--EHQIFSEVFFRNDPGGTSKRCLVTGVINFEHDDSKISDILLCSNSDNSSI 70
+ F RD EH V N+ G+ + + F+ D S L+ DN S+
Sbjct: 77 EKFVRKRDRVEHDRNGYVRRNNEASGSFMKMNKLDIFEFDEYDGFDSANLMRKRFDNGSV 136
Query: 71 --TSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGG--NDESLNAKRMKFSVDNL 126
++S + V+ S SG R++ G + S + D
Sbjct: 137 GVRGRSSFASRRVDSS---VGRSGSGREGLFDRRRNTFVNGTCSASSQEDSSSESDSDEP 193
Query: 127 TYIKPKSGQVLTSTDILKGTVAGTSCPSTDSVF-RTVALHLVESSNQGITSGRYLLKQNV 185
++ +G + + T+A + P ++ R + + + + NV
Sbjct: 194 MRVQGINGVLKVKVNNKTNTLAASINPRDAEIYERPPSSRKAQRRENVVVKPPFRKSNNV 253
Query: 186 DN-SAVDDMDVIKQS 199
DN S ++ D+ ++S
Sbjct: 254 DNNSESEESDMSRKS 268
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 433 (157.5 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 89/235 (37%), Positives = 132/235 (56%)
Query: 622 KNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPKDDAVIKDGLVTNNGIICKCCNLVFS 681
++G EG RT+L W+I + I+ LN +Q + K ++ +G++T GI C CC+ VFS
Sbjct: 533 EDGYILFEGKRTMLGWMIDSTIVPLNGKVQCMDCKKTDILLEGIITKEGIRCNCCDEVFS 592
Query: 682 VSQFKIHAGFKPNRPCLNLVMESGKPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKND 741
V F++HAG N+P +L +E G C ++ + + +S+ V+ D ND
Sbjct: 593 VLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHF--VDFGSGDPND 650
Query: 742 DSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSF 801
D+CGICGDGG+LICCD CPS FHQ+CL I+ P+G+W+C NC+C C K +S+
Sbjct: 651 DTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTL 710
Query: 802 DALK-CSQCEHK----Y------HGECL-KDMS-KGAVSEAWFCNQSCQEVGNKL 843
+L C CE K Y H C+ +D + G S FC + CQE+ +L
Sbjct: 711 PSLSSCRLCEEKCSKHYPHTLADHQACINQDGTVPGERSTDSFCGKYCQELFEEL 765
Score = 107 (42.7 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 277 RSLLQNHIFNLLTAAGWAVERRKRPSRKYMDTIYRSPEGRLFREFPKVWRVCGENL 332
+ +L + I LL AGW VE R R R Y D +Y +PEG+ K ++V + L
Sbjct: 389 KKMLSDRILQLLLTAGWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQVYKKQL 444
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 433 (157.5 bits), Expect = 5.5e-43, Sum P(2) = 5.5e-43
Identities = 89/235 (37%), Positives = 132/235 (56%)
Query: 622 KNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPKDDAVIKDGLVTNNGIICKCCNLVFS 681
++G EG RT+L W+I + I+ LN +Q + K ++ +G++T GI C CC+ VFS
Sbjct: 533 EDGYILFEGKRTMLGWMIDSTIVPLNGKVQCMDCKKTDILLEGIITKEGIRCNCCDEVFS 592
Query: 682 VSQFKIHAGFKPNRPCLNLVMESGKPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKND 741
V F++HAG N+P +L +E G C ++ + + +S+ V+ D ND
Sbjct: 593 VLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHF--VDFGSGDPND 650
Query: 742 DSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSF 801
D+CGICGDGG+LICCD CPS FHQ+CL I+ P+G+W+C NC+C C K +S+
Sbjct: 651 DTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTL 710
Query: 802 DALK-CSQCEHK----Y------HGECL-KDMS-KGAVSEAWFCNQSCQEVGNKL 843
+L C CE K Y H C+ +D + G S FC + CQE+ +L
Sbjct: 711 PSLSSCRLCEEKCSKHYPHTLADHQACINQDGTVPGERSTDSFCGKYCQELFEEL 765
Score = 107 (42.7 bits), Expect = 5.5e-43, Sum P(2) = 5.5e-43
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 277 RSLLQNHIFNLLTAAGWAVERRKRPSRKYMDTIYRSPEGRLFREFPKVWRVCGENL 332
+ +L + I LL AGW VE R R R Y D +Y +PEG+ K ++V + L
Sbjct: 389 KKMLSDRILQLLLTAGWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQVYKKQL 444
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 407 (148.3 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 77/215 (35%), Positives = 116/215 (53%)
Query: 632 RTVLSWLIIAGIIALNDVIQYRNPKDDAVIKDGLVTNNGIICKCCNLVFSVSQFKIHAGF 691
R +LSWL+ ++ + I+ N KD V K+G +T GI C CC VF+++ F++HA
Sbjct: 588 RNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANG 647
Query: 692 KPNRPCLNLVMESGKPFTLCQLQAWSDEYKSRKSATRAGTVETD-EDDKNDDSCGICGDG 750
N+ ++ G+ CQ++A YK RK A ++ +ND C +C G
Sbjct: 648 ASCSGAANIFLDDGRSLLECQVEA----YKKRKKAQPPDMLKMKLRQGENDVFCSVCHYG 703
Query: 751 GELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDA--LKCSQ 808
G+LI CD CPSAFH CL ++D+P G WFC +C C CG ++++ + + C Q
Sbjct: 704 GKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQ 763
Query: 809 CEHKYHGECLK-----DMSKGAVSEAWFCNQSCQE 838
CE KYH CL+ D + E WFC++ C+E
Sbjct: 764 CELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEE 798
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 249 (92.7 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 47/107 (43%), Positives = 60/107 (56%)
Query: 738 DKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGS-WFCSNCTCWICGDLVNDKE 796
D N D C +C GG+L+ CD CPSAFH ACL + LP WFC C C ICG + +
Sbjct: 253 DMNCDVCCVCHWGGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCCCCDICGSM--ESP 310
Query: 797 ASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEVGNKL 843
A+S A C QC+ ++H CLK+ S S WFC+ C V + L
Sbjct: 311 ANSKLMA--CEQCQRRFHLTCLKEDSCIVSSRGWFCSSQCNRVFSAL 355
Score = 64 (27.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 277 RSLLQNHIFNLLTAAGWAVERRKRPSRKYMDTIYRSPEGRLFREFPKVWRVCGENLLADG 336
RS L + L+A GW + + ++K + Y+SP+G+ F K C +
Sbjct: 37 RSDLSIKVKRHLSALGWVISYYNKRNKK--EQRYKSPKGKWFYSLAKACMSCVDQDSQQQ 94
Query: 337 SNVVPADD 344
+VP D
Sbjct: 95 LQIVPKYD 102
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 187 (70.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
KN+D C +C DGGELICCD CP AFH ACLS ++++P+G+W CS+C
Sbjct: 87 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 193 (73.0 bits), Expect = 4.1e-13, Sum P(4) = 4.1e-13
Identities = 43/132 (32%), Positives = 61/132 (46%)
Query: 670 GIICKCCNLVFSVSQFKIHAGFKPNR-PCLNLVMESGKPFTLCQLQAWSDEYKSRKSATR 728
GI C CC S S F+ HAG+ R P + +G L W+ +
Sbjct: 557 GIYCYCCKCEVSPSLFEAHAGWASRRKPYFYIYTSNG-----VSLHEWATTFSH------ 605
Query: 729 AGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWIC 788
G + D N+D C IC DGG L+ CD+CP AFH C+S+ +P G+W C C
Sbjct: 606 -GRKYSAND--NNDLCVICADGGNLLLCDSCPRAFHIECVSLPSIPRGNWHCKYCENKFT 662
Query: 789 GDLVNDKEASSS 800
++ + +SS
Sbjct: 663 SEIAGEYNVNSS 674
Score = 75 (31.5 bits), Expect = 4.1e-13, Sum P(4) = 4.1e-13
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 806 CSQCEHKYHGECLKDMSKGAVSEA----WFCNQSCQEVGNKL 843
C QCE +YH CL + + E WFC+ C + + L
Sbjct: 727 CDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTL 768
Score = 45 (20.9 bits), Expect = 4.1e-13, Sum P(4) = 4.1e-13
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 80 NVEDSHNATENSGGACGSRCYPERSSLEGGNDESLNAKRMKFSVDNLTYIKPKSGQVLTS 139
++E+S + + G G C RSS G + S ++ V N T ++ SG+V+
Sbjct: 76 HLEESKPTSGVTSGFGGDMC---RSSSVGETNVSGSS-----CVKN-TLVESSSGKVVVI 126
Query: 140 TDILKGTVAGTSCPSTDS 157
++ G +A + TDS
Sbjct: 127 ERLVTGGLAESPAVETDS 144
Score = 38 (18.4 bits), Expect = 4.1e-13, Sum P(4) = 4.1e-13
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 234 SPSVTVAEKSGFAQCAAETVDRSISVGL 261
S SV++A+KS + ETV GL
Sbjct: 245 SHSVSLADKSILIRSRPETVRDLFETGL 272
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 187 (70.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
KN+D C +C DGGELICCD CP AFH ACLS ++++P+G+W CS+C
Sbjct: 87 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
Score = 49 (22.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGEC 817
C +CGD D L+C+ C +H C
Sbjct: 227 CGVCGD---------GTDVLRCTHCAAAFHWRC 250
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 192 (72.6 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 723 RKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFC 780
R A A E KN+D C +C DGGELICCD CP AFH ACLS + D+P+G+W C
Sbjct: 278 RVQAPPALPSEPQLQQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRC 337
Query: 781 SNC 783
S+C
Sbjct: 338 SSC 340
Score = 52 (23.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 18/69 (26%), Positives = 25/69 (36%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSE-AWFCNQSCQEVGNKL 843
C +CGD D L+C+ C +H C GA A C + G
Sbjct: 432 CGVCGD---------GSDVLRCTHCAAAFHWRC--HFPGGAPRPGAPRCRSCSGDAGPAP 480
Query: 844 GQGRVSALP 852
G G ++ P
Sbjct: 481 GDGAPASTP 489
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 195 (73.7 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
+ R A A E KN+D C +C DGGELICCD CP AFH ACLS ++D+P+G+W
Sbjct: 284 QDRAPAPPALPSEPQPHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTW 343
Query: 779 FCSNC 783
CS+C
Sbjct: 344 RCSSC 348
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 185 (70.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
E KN+D C +C DGGELICCD CP AFH ACLS +Q++P+G W CS C
Sbjct: 290 EPQVHQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
Score = 53 (23.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGEC 817
C +CGD S D L+C+ C +H C
Sbjct: 434 CGVCGD---------STDVLRCAHCAAAFHWRC 457
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 185 (70.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
+ R A A E KN+D C C DGGEL+CCD CP AFH ACL+ + ++P+G+W
Sbjct: 284 RDRAPAPPALPSEPQLHQKNEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTW 343
Query: 779 FCSNC 783
CSNC
Sbjct: 344 RCSNC 348
Score = 53 (23.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGEC 817
C +CGD DAL+C+ C +H C
Sbjct: 442 CGVCGD---------GADALRCAHCAAAFHWRC 465
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 187 (70.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
KN+D C +C DGGELICCD CP AFH ACLS ++++P+G+W CS+C
Sbjct: 294 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
Score = 49 (22.3 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGEC 817
C +CGD D L+C+ C +H C
Sbjct: 434 CGVCGD---------GTDVLRCTHCAAAFHWRC 457
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 187 (70.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
E + KN+D C +C DGGELICCD CP AFH ACLS +Q++P+G W CS C
Sbjct: 290 EPQVNQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
Score = 44 (20.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGEC 817
C +CGD + L+C+ C +H C
Sbjct: 434 CSVCGD---------GTEVLRCAHCAAAFHWRC 457
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 142 (55.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 43 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 102
Query: 781 SNC 783
C
Sbjct: 103 PEC 105
Score = 40 (19.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 102 CPECEKITVAECIETQSK 119
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 155 (59.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 184 (69.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 730 GTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
G E ++DD++ + C +C DGGEL+CCD+CPSA+H CL+ + +P G W C C+C
Sbjct: 426 GAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSC 483
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 183 (69.5 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 413 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 472
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 473 LPEIPNGEWLCPRCTC 488
Score = 141 (54.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 344 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 402
Query: 779 FCSNC 783
C +C
Sbjct: 403 SCPHC 407
Score = 51 (23.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 453 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 495
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 176 (67.0 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNCT 784
N+D C +CGDGGELICCD CP AFH CL + +P G W CS+CT
Sbjct: 423 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSCT 469
Score = 142 (55.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
N+D C +CGDGGELICCD CP AFH CL + LP
Sbjct: 291 NEDECAVCGDGGELICCDGCPRAFHLPCL-VPPLP 324
Score = 44 (20.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 13/52 (25%), Positives = 18/52 (34%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSC 836
C +CGD + + C C +H CL W C+ SC
Sbjct: 427 CAVCGD---------GGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCS-SC 468
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 156 (60.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 34/83 (40%), Positives = 46/83 (55%)
Query: 710 LCQLQAWSDEYKSRKSATRAGTVETDEDDK----NDDSCGICGDGGELICCDNCPSAFH- 764
L Q+QA K+ ++ R+ E + N DSC C +GG+L+CCD+CP+AFH
Sbjct: 45 LAQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHL 104
Query: 765 QAC---LSIQDLPTGSWFCSNCT 784
Q C LS + LP G W C CT
Sbjct: 105 QCCNPPLSEEMLPPGEWMCHRCT 127
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 176 (67.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 332 CEKEGIQWEPKDDDDDEDEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 390
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 391 PLPEIPNGEWLCPRCTC 407
Score = 132 (51.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 721 KSRKSATRAGTVETDEDD-KND--DSCGICGDGGELICCDNCPSAFHQACLS--IQDLPT 775
K R + A + D D + D D C +C GGE+I CD CP A+H CL ++ P
Sbjct: 265 KKRNQGSPAHSPVDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPE 324
Query: 776 GSWFCSNC 783
G W C +C
Sbjct: 325 GKWSCPHC 332
Score = 58 (25.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 398 IGSLRK-GDVVKAARSFIVDKREKSDPILALENVSSFETHCS 438
+GS RK G V A+ S D+RE+SD A + SS + CS
Sbjct: 211 VGSKRKKGSSVSASVSSEEDEREESDFDSASIHSSSMRSECS 252
Score = 51 (23.0 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 372 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 414
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 278 DDGDGYETDHQDYCEV 293
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 173 (66.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
N+D C +CGDGGELICCD CP AFH CL + +P+G+W CS+C
Sbjct: 455 NEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSC 500
Score = 142 (55.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
N+D C +CGDGGELICCD CP AFH CL + LP
Sbjct: 300 NEDECAVCGDGGELICCDGCPRAFHLPCL-VPPLP 333
Score = 47 (21.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 14/52 (26%), Positives = 19/52 (36%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSC 836
C +CGD + + C C +H CL S W C+ SC
Sbjct: 459 CAVCGD---------GGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCS-SC 500
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A +E + + G E +E+D + + C +C DGGEL+CCD C S++H CL+
Sbjct: 300 QWEAKEEEEEYEEEGEEEG--EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP 357
Query: 770 IQDLPTGSWFCSNCTC 785
+ D+P G W C CTC
Sbjct: 358 LPDIPNGEWLCPRCTC 373
Score = 135 (52.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 729 AGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
AG E D E D + D C +C GGE+I CD CP A+H CL + P G W C +C
Sbjct: 237 AGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 294
Score = 47 (21.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 338 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 368
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDL 773
W D S+KS G EDD N+D C +C +GGEL+CC+ CP FH +C ++ +
Sbjct: 55 WLDA--SQKSPLLVGETRK-EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANF 111
Query: 774 PTGSWFCSNC 783
P+G W C+ C
Sbjct: 112 PSGEWICTFC 121
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 183 (69.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 420 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 479
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 480 LPEIPNGEWLCPRCTC 495
Score = 141 (54.7 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 351 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 409
Query: 779 FCSNC 783
C +C
Sbjct: 410 SCPHC 414
Score = 51 (23.0 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 460 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 502
Score = 48 (22.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL--QIAKRGSKFEKTHHDCDG 597
Q D+SG E E +++ + + +GS TP L + K+ K + D
Sbjct: 81 QLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDD 140
Query: 598 SKNGQKRPVT-CRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPK 656
+ K P + ++ +D G E I + ++ E RT+ ++ + + +I +NPK
Sbjct: 141 DDDDSKEPKSSAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKNPK 195
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 183 (69.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 420 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 479
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 480 LPEIPNGEWLCPRCTC 495
Score = 141 (54.7 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 351 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 409
Query: 779 FCSNC 783
C +C
Sbjct: 410 SCPHC 414
Score = 51 (23.0 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 460 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 502
Score = 48 (22.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL--QIAKRGSKFEKTHHDCDG 597
Q D+SG E E +++ + + +GS TP L + K+ K + D
Sbjct: 81 QLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDD 140
Query: 598 SKNGQKRPVT-CRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPK 656
+ K P + ++ +D G E I + ++ E RT+ ++ + + +I +NPK
Sbjct: 141 DDDDSKEPKSSAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKNPK 195
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 183 (69.5 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 440 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 499
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 500 LPEIPNGEWLCPRCTC 515
Score = 141 (54.7 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 371 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 429
Query: 779 FCSNC 783
C +C
Sbjct: 430 SCPHC 434
Score = 51 (23.0 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 480 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 522
Score = 48 (22.0 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL--QIAKRGSKFEKTHHDCDG 597
Q D+SG E E +++ + + +GS TP L + K+ K + D
Sbjct: 101 QLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDD 160
Query: 598 SKNGQKRPVT-CRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPK 656
+ K P + ++ +D G E I + ++ E RT+ ++ + + +I +NPK
Sbjct: 161 DDDDSKEPKSSAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKNPK 215
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 177 (67.4 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCT 784
NDD C CGDGG+L+CCDNC ++FH CL+ + ++P+G WFC +CT
Sbjct: 60 NDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCT 106
Score = 54 (24.1 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 795 KEASSSFDALKCSQCEHKYHGECLK 819
K++S+ D ++C++C +H CL+
Sbjct: 201 KDSSNQTDIVQCNRCNSCFHTFCLE 225
Score = 37 (18.1 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 5/13 (38%), Positives = 12/13 (92%)
Query: 296 ERRKRPSRKYMDT 308
+R++RPS +Y+++
Sbjct: 33 KRQRRPSSEYLES 45
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 183 (69.5 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 442 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 501
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 502 LPEIPNGEWLCPRCTC 517
Score = 141 (54.7 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 373 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 431
Query: 779 FCSNC 783
C +C
Sbjct: 432 SCPHC 436
Score = 51 (23.0 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 482 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 524
Score = 47 (21.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL--QIAKRGSKFEKTHHDCDG 597
Q D+SG E E +++ + + +GS TP L + K+ K + D
Sbjct: 101 QLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEDE 160
Query: 598 SKNGQKRPVT-CRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPK 656
+ K P + ++ +D G E I + ++ E RT+ ++ + + +I +NPK
Sbjct: 161 DDDDSKEPKSSAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKNPK 215
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 175 (66.7 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 730 GTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
G E +EDD + + C +C DGGEL+CCD CPS++H CL+ + ++P G W C CTC
Sbjct: 409 GDAE-EEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTC 465
Score = 144 (55.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 721 KSRKSATRAGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTG 776
K +K TV D E D + D C +C GGE+I CD CP A+H CL ++ P G
Sbjct: 319 KKKKKGEEDSTVAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEG 377
Query: 777 SWFCSNC 783
W C +C
Sbjct: 378 KWSCPHC 384
Score = 51 (23.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 430 ELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 472
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
E +E+D + + C +C DGGEL+CCD C S++H CL+ + D+P G W C CTC
Sbjct: 461 EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTC 515
Score = 133 (51.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 727 TRAGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSN 782
T G E D E D + D C +C GGE+I CD CP A+H CL + P G W C +
Sbjct: 378 TVTGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPH 436
Query: 783 C 783
C
Sbjct: 437 C 437
Score = 47 (21.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 480 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 510
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 159 (61.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 351 RSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 410
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ ++ +S E C E+
Sbjct: 411 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTVQGLSPVDQRKCERLLLYLYCHEL 459
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 460 SIEFQEPVPASIPNY 474
Score = 56 (24.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 253 QVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 309
Query: 86 NA 87
+A
Sbjct: 310 DA 311
Score = 48 (22.0 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 41/166 (24%), Positives = 64/166 (38%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 214 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGAV 273
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ-----DADAS---GVQLEP---KEAQKQF 558
+ R + + S SLT + T + DA AS V+ EP E+ KQ
Sbjct: 274 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKTEPTDMNESCKQS 333
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+++ V G K+P SL +I GS K + + D C +NG
Sbjct: 334 GLSSLVNG--KSPVRSLMHRSARIGGDGSNKDDDPNEDWCAVCQNG 377
Score = 41 (19.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDESLNAKRMKFSVDNLTYI 129
+S S+ + V ++ S G+CGS E++SL +D+ + K+ + D +
Sbjct: 211 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQ-VKVKQEPGTEDEICSF 269
Query: 130 KPKSGQVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQNVDNSA 189
Q T D + +S S+ + + LHL ES + S L+ +V
Sbjct: 270 SGAVKQEKTE-DGRRSACMLSSPESSLTPPLSTNLHL-ESELDALAS----LENHVKTEP 323
Query: 190 VDDMDVIKQS 199
D + KQS
Sbjct: 324 TDMNESCKQS 333
Score = 38 (18.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 286 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 319
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 183 (69.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 413 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 472
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 473 LPEIPNGEWLCPRCTC 488
Score = 141 (54.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 344 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 402
Query: 779 FCSNC 783
C +C
Sbjct: 403 SCPHC 407
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 453 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 495
Score = 43 (20.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/117 (21%), Positives = 51/117 (43%)
Query: 543 DASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL--QIAKRGSKFEKTHHDCDGSKN 600
D+SG E E +++ + + +GS TP L + K+ K + + +
Sbjct: 77 DSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDEDD 136
Query: 601 GQKRPVT-CRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPK 656
K P + ++ +D G E I + ++ E RT+ ++ + + +I +NPK
Sbjct: 137 DSKEPKSSAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKNPK 188
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFC 780
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C
Sbjct: 73 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 181 (68.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 420 QWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 479
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 480 LPEIPNGEWLCPRCTC 495
Score = 141 (54.7 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 351 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 409
Query: 779 FCSNC 783
C +C
Sbjct: 410 SCPHC 414
Score = 51 (23.0 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 460 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 502
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSS-----LGSCHLQIAKRGSKFEKTHHD 594
Q D+SG E E +++ + + +GS TP LG + +K K E+ D
Sbjct: 81 QLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEED 140
Query: 595 CDGSKNGQKRPVTCRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRN 654
D K + ++ +D G E I + ++ E RT+ ++ + + +I +N
Sbjct: 141 DDDDSKEPKS--SAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKN 193
Query: 655 PK 656
PK
Sbjct: 194 PK 195
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 172 (65.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A +E + + G E +E+D + + C +C DGGEL+CCD C S++H CL+
Sbjct: 429 QWEAKEEEEEYEEEGEEEG--EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP 486
Query: 770 IQDLPTGSWFCSNCTC 785
+ D+P G W C CTC
Sbjct: 487 LPDIPNGEWLCPRCTC 502
Score = 135 (52.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 729 AGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
AG E D E D + D C +C GGE+I CD CP A+H CL + P G W C +C
Sbjct: 366 AGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 47 (21.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 467 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 497
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 172 (65.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A +E + + G E +E+D + + C +C DGGEL+CCD C S++H CL+
Sbjct: 488 QWEAKEEEEEYEEEGEEEG--EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP 545
Query: 770 IQDLPTGSWFCSNCTC 785
+ D+P G W C CTC
Sbjct: 546 LPDIPNGEWLCPRCTC 561
Score = 135 (52.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 729 AGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
AG E D E D + D C +C GGE+I CD CP A+H CL + P G W C +C
Sbjct: 425 AGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 482
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 526 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 556
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 181 (68.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 413 QWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 472
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 473 LPEIPNGEWLCPRCTC 488
Score = 141 (54.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 344 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 402
Query: 779 FCSNC 783
C +C
Sbjct: 403 SCPHC 407
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 453 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 495
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 543 DASGVQLEPKEAQKQFLVNAAVQGSQKTPSS-----LGSCHLQIAKRGSKFEKTHHDCDG 597
D+SG E E +++ + + +GS TP LG + +K K E+ D D
Sbjct: 77 DSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDD 136
Query: 598 SKNGQKRPVTCRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRNPK 656
K + ++ +D G E I + ++ E RT+ ++ + + +I +NPK
Sbjct: 137 DSKEPKS--SAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKNPK 188
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 184 (69.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G E +EDD + + C +C DGGEL+CCD+CPS++H CL+
Sbjct: 403 QWEAREDASEGEEDNEAGG--EAEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPP 460
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 461 LPEIPNGEWICPRCTC 476
Score = 144 (55.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKND-------DSCGICGDGGELICCDNCPSAFHQACLS 769
S+ SR SA + +T +D+ D D C +C GGE+I CD CP A+H CL
Sbjct: 322 SNSRSSRSSAKKKPKKKTKKDEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLD 381
Query: 770 --IQDLPTGSWFCSNC 783
++ P G+W C +C
Sbjct: 382 PDMEKAPEGTWSCPHC 397
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 441 ELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGKV 483
Score = 41 (19.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 47 INFEHDDSKISDILLCSNSDNSSITSQASSK 77
++ + DD I+ + + + S++ S S A K
Sbjct: 304 VDSDFDDGSINSVSVSNGSNSRSSRSSAKKK 334
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 12 DDDFEGSRDEHQIFSEV 28
D+D +G +HQ + EV
Sbjct: 342 DEDGDGYETDHQDYCEV 358
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 183 (69.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A D + + G +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 441 QWEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPP 500
Query: 770 IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 501 LPEIPNGEWLCPRCTC 516
Score = 141 (54.7 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K +K V+ E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 372 KKKKGEEEVTAVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKW 430
Query: 779 FCSNC 783
C +C
Sbjct: 431 SCPHC 435
Score = 51 (23.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 481 ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKV 523
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSS-----LGSCHLQIAKRGSKFEKTHHD 594
Q D+SG E E ++ + + +GS TP LG + +K K E+ D
Sbjct: 102 QLGDSSGEGPEFVEEDEEAALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEED 161
Query: 595 CDGSKNGQKRPVTCRIKDDDLLGGELIKNGMWFMEGTRTVLSWLIIAGIIALNDVIQYRN 654
D K + ++ +D G E I + ++ E RT+ ++ + + +I +N
Sbjct: 162 DDDDSKEPKS--SAQLLED--WGMEDIDH-VFSEEDYRTLTNYKAFSQFV--RPLIAAKN 214
Query: 655 PK 656
PK
Sbjct: 215 PK 216
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 168 (64.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDL 773
W D S+KS G EDD N+D C +C +GGEL+CC+ CP FH +C ++ +
Sbjct: 804 WLDP--SQKSPLHVGETRK-EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNF 860
Query: 774 PTGSWFCSNC 783
P+G W C+ C
Sbjct: 861 PSGEWICTFC 870
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 171 (65.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKND--DSCGICGDGGELICCDNCPSAFHQACL 768
C+ + E K + G E ++++++D + C +C DGGEL+CCD C S++H CL
Sbjct: 422 CEKEGVQWEAKEEEEEYEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCL 481
Query: 769 S--IQDLPTGSWFCSNCTC 785
+ + D+P G W C CTC
Sbjct: 482 NPPLPDIPNGEWLCPRCTC 500
Score = 137 (53.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 727 TRAGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSN 782
T AG E D E D + D C +C GGE+I CD CP A+H CL + P G W C +
Sbjct: 363 TVAGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPH 421
Query: 783 C 783
C
Sbjct: 422 C 422
Score = 47 (21.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 465 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 495
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 170 (64.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS-- 769
Q +A +E + G E +E+D + + C +C DGGEL+CCD C S++H CL+
Sbjct: 425 QWEAKEEEEDYEEEGEEEG--EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP 482
Query: 770 IQDLPTGSWFCSNCTC 785
+ D+P G W C CTC
Sbjct: 483 LPDIPNGEWLCPRCTC 498
Score = 138 (53.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 33/100 (33%), Positives = 44/100 (44%)
Query: 729 AGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC- 783
AG E D E D + D C +C GGE+I CD CP A+H CL + P G W C +C
Sbjct: 362 AGEEEIDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCE 420
Query: 784 ---TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKD 820
W + D E + K + +H + KD
Sbjct: 421 KEGVQWEAKEEEEDYEEEGEEEGEKEEEDDHMEYCRVCKD 460
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 179 (68.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 387 CEKEGIQWEPKDDDDEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 445
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 446 PLPEIPNGEWLCPRCTC 462
Score = 136 (52.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K R+ R + E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 324 KRRRKKKRIDDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKW 382
Query: 779 FCSNC 783
C +C
Sbjct: 383 SCPHC 387
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 427 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 469
Score = 40 (19.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 97 SRCYPERSSLEGGNDE 112
++C +R EG NDE
Sbjct: 59 NKCKGKRKKKEGSNDE 74
Score = 37 (18.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 333 DDGDGYETDHQDYCEV 348
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 161 (61.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 707 RSARTGGEGTNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 766
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C DL + +D C +H G+ + +S E C E+
Sbjct: 767 -----FCRDL---SKPEVEYD---CDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHEL 815
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 816 SIEFQEPVPASIPNY 830
Score = 55 (24.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 610 QVKVKQEPGTEEEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 666
Query: 86 NA 87
A
Sbjct: 667 EA 668
>FB|FBgn0263667 [details] [associations]
symbol:Lpt "Lost PHDs of trr" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0051568
"histone H3-K4 methylation" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0044666 "MLL3/4 complex"
evidence=IDA] [GO:0035076 "ecdysone receptor-mediated signaling
pathway" evidence=IGI] [GO:0071390 "cellular response to ecdysone"
evidence=IMP] [GO:1900114 "positive regulation of histone H3-K9
trimethylation" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA] [GO:0008230
"ecdysone receptor holocomplex" evidence=IPI] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0007474 "imaginal
disc-derived wing vein specification" evidence=IMP] [GO:0018990
"ecdysis, chitin-based cuticle" evidence=IMP] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00109
SMART:SM00184 SMART:SM00249 EMBL:AE013599 GO:GO:0006911
GO:GO:0035556 GO:GO:0046872 GO:GO:0007474 GO:GO:0008270
GO:GO:0003682 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 GO:GO:0005700
GO:GO:0035076 GO:GO:0051568 GO:GO:0030374 GO:GO:0018990
GO:GO:0044666 HSSP:Q14839 GeneTree:ENSGT00690000101661
GO:GO:1900114 GO:GO:0008230 FlyBase:FBgn0263667 EMBL:BT024446
RefSeq:NP_611847.2 UniGene:Dm.4536 SMR:Q9W1H0 MINT:MINT-284602
EnsemblMetazoa:FBtr0072134 GeneID:37795 KEGG:dme:Dmel_CG5591
UCSC:CG5591-RA InParanoid:Q9W1H0 OMA:LYANTEH GenomeRNAi:37795
NextBio:805447 Uniprot:Q9W1H0
Length = 1482
Score = 176 (67.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 38/113 (33%), Positives = 55/113 (48%)
Query: 743 SCGICGDGGELICCDNCPSAFHQACLSIQDLP-TGS-WFCSNCT-CWICGDLVNDKEASS 799
SC GD +LI C C FH C+ + +LP T S W C+ CT C IC ++ S+
Sbjct: 208 SCSSLGDLSKLIMCSTCGDHFHSTCIGLANLPDTRSGWNCARCTKCQICR-----QQDSN 262
Query: 800 SFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQS--CQEVGNKLGQGRVSA 850
+KC QC+ YH CL+ + W CN+ C + G++ G S+
Sbjct: 263 DTKYVKCEQCQKTYHASCLRPVISAIPKYGWKCNRCRVCTDCGSRTPGGGSSS 315
Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 566 GSQKTPSSLGSCHLQIAKRG 585
G ++ SS G CH ++ K G
Sbjct: 76 GPKQAASSSGDCHYELDKIG 95
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 179 (68.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 385 CEKEGIQWEPKDDDEEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 443
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 444 PLPEIPNGEWLCPRCTC 460
Score = 136 (52.9 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K R+ R + E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 322 KRRRKKKRIDDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKW 380
Query: 779 FCSNC 783
C +C
Sbjct: 381 SCPHC 385
Score = 51 (23.0 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 425 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 467
Score = 43 (20.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 35 GGTSKRCLVTGVINFEHDDSKISDILLCSNSDNSSITSQASSKN 78
GG SKR + E +DS + + + S+S S ++ KN
Sbjct: 278 GGISKRKKGSSSEEDEPEDSDLDNASIHSSSVRSECSAALGKKN 321
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 331 DDGDGYETDHQDYCEV 346
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 168 (64.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
E +E+D + + C +C DGGEL+CCD C S++H CL+ + D+P G W C CTC
Sbjct: 404 EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTC 458
Score = 133 (51.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 727 TRAGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSN 782
T G E D E D + D C +C GGE+I CD CP A+H CL + P G W C +
Sbjct: 321 TVTGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPH 379
Query: 783 C 783
C
Sbjct: 380 C 380
Score = 47 (21.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 423 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 453
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 168 (64.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
E +E+D + + C +C DGGEL+CCD C S++H CL+ + D+P G W C CTC
Sbjct: 448 EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTC 502
Score = 139 (54.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 33/100 (33%), Positives = 45/100 (45%)
Query: 729 AGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC- 783
AG E D E D + D C +C GGE+I CD CP A+H CL + P G W C +C
Sbjct: 366 AGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCE 424
Query: 784 ---TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKD 820
W + +D E + K + +H + KD
Sbjct: 425 KEGVQWEAKEEDDDYEEEGEEEGEKEEEDDHMEYCRVCKD 464
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 168 (64.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
E +E+D + + C +C DGGEL+CCD C S++H CL+ + D+P G W C CTC
Sbjct: 499 EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTC 553
Score = 133 (51.9 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 727 TRAGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSN 782
T G E D E D + D C +C GGE+I CD CP A+H CL + P G W C +
Sbjct: 416 TVTGEEEVDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPH 474
Query: 783 C 783
C
Sbjct: 475 C 475
Score = 47 (21.6 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 518 ELLCCDACISSYHIHCLNPPLPDIPNGEWLC 548
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 159 (61.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 688 RSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 747
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ ++ +S E C E+
Sbjct: 748 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTVQGLSPVDQRKCERLLLYLYCHEL 796
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 797 SIEFQEPVPASIPNY 811
Score = 56 (24.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 590 QVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 646
Query: 86 NA 87
+A
Sbjct: 647 DA 648
Score = 40 (19.1 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDESL 114
+S S+ + V ++ S G+CGS + E G ++ +
Sbjct: 560 SSGLSNSHTPVRPPSTSSTGSRGSCGSSSDQVKVKQEPGTEDEI 603
Score = 38 (18.4 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 623 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 656
>UNIPROTKB|E1C6X8 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00700000104009 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 CTD:54904 KO:K11425 OMA:MEKDIHK
EMBL:AADN02054858 IPI:IPI00603343 RefSeq:XP_001232891.1
UniGene:Gga.29652 UniGene:Gga.53440 Ensembl:ENSGALT00000005228
GeneID:426778 KEGG:gga:426778 NextBio:20828194 Uniprot:E1C6X8
Length = 1436
Score = 167 (63.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 718 DEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAFHQACLSIQDLPT 775
++ K+ K + ++T++ ++D+C CGDGGEL+ CD +CP A+H CL++ P
Sbjct: 1297 EKVKNAKLKQKKRKIKTEQKQMHEDNCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPF 1356
Query: 776 GSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAV 826
G W C C IC + SF C C H + C KD KGA+
Sbjct: 1357 GKWECPWHQCDICSS------PAVSF----CEFCPHSF---C-KDHEKGAL 1393
Score = 133 (51.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 38/128 (29%), Positives = 51/128 (39%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGE-LICCDN-CPSAFHQACLSIQDLP 774
SD S +R GT +K D C IC GE L+ C+ C S FH CL ++ +P
Sbjct: 679 SDVQSVDSSLSRRGT----GTNKKDTVCQICESSGESLVSCEGECCSTFHMECLGLKAMP 734
Query: 775 TGSWFCSNC-----TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEA 829
+FC+ C TC+ C K S C YH C++ +
Sbjct: 735 EEKFFCTECKNGEHTCFSC------KLPGKDVKRCSVSACGKFYHEACVRKFATALFESR 788
Query: 830 WF-CNQSC 836
F C Q C
Sbjct: 789 GFRCPQHC 796
Score = 132 (51.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 747 CGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C GG+L+CC++CP++FH CL+I D+P G W C++C
Sbjct: 916 CEKGGKLLCCESCPASFHPECLNI-DMPEGCWNCNDC 951
Score = 52 (23.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 28/155 (18%), Positives = 58/155 (37%)
Query: 467 VSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXXXXXXISEMRLTTLSHS 526
V +G+ + + + +D + K S A D +++++ + S
Sbjct: 610 VKTGLQKGASEISDSCKPLKKRS--RASTDVELTSSAYRDASDSDSRGLNDLQGSFGKRS 667
Query: 527 DIQSLTLDIK-TEVQDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSC----HLQ- 580
D S +D ++VQ D+S + +K + + S G C H++
Sbjct: 668 DSPSAAVDADASDVQSVDSSLSRRGTGTNKKDTVCQICESSGESLVSCEGECCSTFHMEC 727
Query: 581 IAKRGSKFEKTHHDCDGSKNGQKRPVTCRIKDDDL 615
+ + EK C KNG+ +C++ D+
Sbjct: 728 LGLKAMPEEKFF--CTECKNGEHTCFSCKLPGKDV 760
Score = 50 (22.7 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 67 NSSITSQASSKNLNVEDSHNATENSGGACGS-------RCYPERSSLEGGNDESLNAKRM 119
NSS + + NV+++ ++ E + G+ GS R RS E + K
Sbjct: 540 NSSSSQRNEKATCNVQNA-SSPETTSGSAGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK 598
Query: 120 KFSVDN--LTYIKP---KSGQVLTST--DILKGTVAGTSCPSTDSVFRTVALHLVESSNQ 172
K V+ LT +K K ++ + + K + A T T S +R + +S ++
Sbjct: 599 KEQVEMVPLTAVKTGLQKGASEISDSCKPLKKRSRASTDVELTSSAYRDAS----DSDSR 654
Query: 173 GITS--GRYLLKQNVDNSAVD----DMDVIKQSLPRLD-GHDGKEAI 212
G+ G + + + ++AVD D+ + SL R G + K+ +
Sbjct: 655 GLNDLQGSFGKRSDSPSAAVDADASDVQSVDSSLSRRGTGTNKKDTV 701
Score = 40 (19.1 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 16 EGSRDEHQIFSEVFFRNDPGGTSKRCLVTGVINFEHD 52
E EH FS PG KRC V+ F H+
Sbjct: 742 ECKNGEHTCFSCKL----PGKDVKRCSVSACGKFYHE 774
Score = 37 (18.1 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 57 SDILLCSNSDNSSITSQA 74
S IL+CSN + +S A
Sbjct: 840 SHILICSNHSKRNHSSSA 857
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 168 (64.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTC 785
E +E+D + + C +C DGGEL+CCD C S++H CL+ + D+P G W C CTC
Sbjct: 499 EKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTC 553
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 159 (61.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 691 RSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 750
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ ++ +S E C E+
Sbjct: 751 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTVQGLSPVDQRKCERLLLYLYCHEL 799
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 800 SIEFQEPVPASIPNY 814
Score = 56 (24.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 593 QVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 649
Query: 86 NA 87
+A
Sbjct: 650 DA 651
Score = 48 (22.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 41/166 (24%), Positives = 64/166 (38%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 554 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGAV 613
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ-----DADAS---GVQLEP---KEAQKQF 558
+ R + + S SLT + T + DA AS V+ EP E+ KQ
Sbjct: 614 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKTEPTDMNESCKQS 673
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+++ V G K+P SL +I GS K + + D C +NG
Sbjct: 674 GLSSLVNG--KSPVRSLMHRSARIGGDGSNKDDDPNEDWCAVCQNG 717
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDESLNAKRMKFSVDNLTYI 129
+S S+ + V ++ S G+CGS E++SL +D+ + K+ + D +
Sbjct: 551 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQ-VKVKQEPGTEDEICSF 609
Query: 130 KPKSGQVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQNVDNSA 189
Q T D + +S S+ + + LHL ES + S L+ +V
Sbjct: 610 SGAVKQEKTE-DGRRSACMLSSPESSLTPPLSTNLHL-ESELDALAS----LENHVKTEP 663
Query: 190 VDDMDVIKQS 199
D + KQS
Sbjct: 664 TDMNESCKQS 673
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 626 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 659
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 174 (66.3 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDL 773
WSD S+KS G EDD N+D C +C +GGEL+CC+ CP FH C ++ +
Sbjct: 805 WSDA--SQKSPVHVGETRK-EDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNF 861
Query: 774 PTGSWFCSNC 783
P+G W C+ C
Sbjct: 862 PSGEWICTFC 871
Score = 41 (19.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 178 RYLLKQNVDNSAVDDMDVIKQSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSV 237
RY QNV + ++ + L K+ + A P + SS++ T +SP++
Sbjct: 539 RYSPSQNVPRQTTIKPNPLQMAF--LAQQAIKQWQISSVQAPPTTASSSSS--TPSSPTI 594
Query: 238 TVAEKSGFAQCAAETVDRSISVG 260
T A ++ +D S VG
Sbjct: 595 TSAAGYDGKAFSSPMIDLSAPVG 617
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 179 (68.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 361 CEKEGIQWEPKDDDDEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 419
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 420 PLPEIPNGEWLCPRCTC 436
Score = 136 (52.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K R+ R + E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 298 KRRRKKKRIDDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKW 356
Query: 779 FCSNC 783
C +C
Sbjct: 357 SCPHC 361
Score = 51 (23.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 401 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 443
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 307 DDGDGYETDHQDYCEV 322
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 163 (62.4 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDL 773
W K+ K R T + ++++ C +C DGG+L+CCD+CPS +H+ CLS ++ +
Sbjct: 11 WKTPGKASKDK-RPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSI 69
Query: 774 PTGSWFCSNC 783
P G W C C
Sbjct: 70 PKGDWICPRC 79
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC++CP+AFH CL+I+ +P GSWFC++C
Sbjct: 158 CFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDC 196
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 165 (63.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 738 DKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
+ NDD C +C DGGELICCD CP AFH +CL + +P G+W C C
Sbjct: 291 EHNDDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLC 338
Score = 41 (19.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 802 DALKCSQCEHKYHGEC 817
+ + C QC YH C
Sbjct: 414 ELITCPQCLQAYHALC 429
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 179 (68.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 303 CEKEGIQWEPKDDDDEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 361
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 362 PLPEIPNGEWLCPRCTC 378
Score = 136 (52.9 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K R+ R + E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 240 KRRRKKKRIDDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKW 298
Query: 779 FCSNC 783
C +C
Sbjct: 299 SCPHC 303
Score = 51 (23.0 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 343 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 385
Score = 39 (18.8 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 404 GDVVKAARSFIVDKREKSDPILALENVSSFETHCS 438
G K S D+RE+SD A + SS + CS
Sbjct: 198 GSKRKKGSSSEEDEREESDFDSASIHSSSVRSECS 232
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 249 DDGDGYETDHQDYCEV 264
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 179 (68.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 319 CEKEGIQWEPKDDDDEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 377
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 378 PLPEIPNGEWLCPRCTC 394
Score = 136 (52.9 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K R+ R + E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 256 KRRRKKKRIDDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKW 314
Query: 779 FCSNC 783
C +C
Sbjct: 315 SCPHC 319
Score = 51 (23.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 359 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 401
Score = 39 (18.8 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 404 GDVVKAARSFIVDKREKSDPILALENVSSFETHCS 438
G K S D+RE+SD A + SS + CS
Sbjct: 214 GSKRKKGSSSEEDEREESDFDSASIHSSSVRSECS 248
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 265 DDGDGYETDHQDYCEV 280
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 179 (68.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 387 CEKEGIQWEPKDDDDEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 445
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 446 PLPEIPNGEWLCPRCTC 462
Score = 40 (19.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 97 SRCYPERSSLEGGNDE 112
++C +R EG NDE
Sbjct: 59 NKCKGKRKKKEGSNDE 74
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 333 DDGDGYETDHQDYCEV 348
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 157 (60.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 502 RSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 561
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ + +S E C E+
Sbjct: 562 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHEL 610
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 611 SIEFQEPVPASIPNY 625
Score = 53 (23.7 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 404 QVKVKQEPGTEDEICSFSGGVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 460
Query: 86 NA 87
+A
Sbjct: 461 DA 462
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 40/166 (24%), Positives = 65/166 (39%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 365 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGGV 424
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ-----DADAS---GVQLEP---KEAQKQF 558
+ R + + S SLT + T + DA AS V++EP E+ KQ
Sbjct: 425 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQS 484
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+++ V G K+P SL +I G+ K + + D C +NG
Sbjct: 485 GLSSLVNG--KSPIRSLMHRSARIGGDGNNKDDDPNEDWCAVCQNG 528
Score = 39 (18.8 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDE 112
+S S+ + V ++ S G+CGS E++SL +D+
Sbjct: 362 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQ 404
Score = 38 (18.4 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 437 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 470
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 158 (60.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G + +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 869 RSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 928
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ + +S E C E+
Sbjct: 929 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHEL 977
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 978 SIEFQEPVPASIPNY 992
Score = 56 (24.8 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVE--- 82
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 771 QVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 827
Query: 83 DSHNATEN 90
D+ + EN
Sbjct: 828 DTLTSLEN 835
Score = 48 (22.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 39/166 (23%), Positives = 63/166 (37%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 732 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTNLSFKSDQVKVKQEPGTEDEICSFSGAV 791
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ---DADA-----SGVQLEP---KEAQKQF 558
+ R + + S SLT + T + + D + V+ EP E+ KQ
Sbjct: 792 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTSLENHVKTEPADMNESCKQS 851
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+N+ V G K+P SL +I GS K + + D C +NG
Sbjct: 852 GLNSLVNG--KSPVRSLMHRSARIGGDGSSKDDDPNEDWCAVCQNG 895
Score = 41 (19.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 31/130 (23%), Positives = 55/130 (42%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDESLNAKRMKFSVDNLTYI 129
+S S+ + V ++ S G+CGS E+++L +D+ + K+ + D +
Sbjct: 729 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTNLSFKSDQ-VKVKQEPGTEDEICSF 787
Query: 130 KPKSGQVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQNVDNSA 189
Q T D + +S S+ + + LHL ES +TS L+ +V
Sbjct: 788 SGAVKQEKTE-DGRRSACMLSSPESSLTPPLSTNLHL-ESELDTLTS----LENHVKTEP 841
Query: 190 VDDMDVIKQS 199
D + KQS
Sbjct: 842 ADMNESCKQS 851
Score = 38 (18.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 804 CMLSSPESSLTPPL-STNLH--LESELDTLTSLENHV 837
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 157 (60.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G + +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 887 RSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 946
Query: 782 NC 783
C
Sbjct: 947 FC 948
Score = 57 (25.1 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 19 RDEHQIFSE-VFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASS 76
+ H S+ V + +PG + C +G + E +D + S +L +S SS+T S+
Sbjct: 780 KSAHSFKSDQVKVKQEPGTEEEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST 837
Query: 77 KNLNVE---DSHNATEN 90
NL++E D+ + EN
Sbjct: 838 -NLHLESELDTLTSLEN 853
Score = 40 (19.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 28/129 (21%), Positives = 49/129 (37%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDESLNAKRMKFSVDNLTYIK 130
+S S+ + V ++ S G+CGS S + + K+ + + +
Sbjct: 747 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKSAHSFKSDQVKVKQEPGTEEEICSFS 806
Query: 131 PKSGQVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQNVDNSAV 190
Q T D + +S S+ + + LHL ES +TS L+ +V
Sbjct: 807 GAVKQEKTE-DGRRSACMLSSPESSLTPPLSTNLHL-ESELDTLTS----LENHVKTEPA 860
Query: 191 DDMDVIKQS 199
D + KQS
Sbjct: 861 DISESCKQS 869
Score = 39 (18.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDD 496
L P PS S G SG++A++ K+ + + +
Sbjct: 750 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKSAHSFKSDQVKVKQE 795
Score = 38 (18.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 822 CMLSSPESSLTPPL-STNLH--LESELDTLTSLENHV 855
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 162 (62.1 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1400 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1438
Score = 149 (57.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K + R E ++ +D C CGDGG+L+ C CP +H CL++ P
Sbjct: 1786 SRKFKRKPHGKRRSQGEVTKE--REDECFSCGDGGQLVSCKKPGCPKVYHADCLNLTKRP 1843
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C +CG KEA+S + S C K H E + +SK
Sbjct: 1844 AGKWECPWHQCDVCG-----KEAASFCEMCPSSFC--KQHREGMLFISK 1885
Score = 56 (24.8 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 34 PGGTSKRCLVTGVI-NFEHD-DSKISDILLCSNSDNSSITSQASSKNLNVEDSHNATENS 91
P GTSK ++ G N E DS + L +S+++ + SS +L+V S +
Sbjct: 640 PVGTSKVLVLGGSTHNSEKPGDSTQDSVRLSPGGGDSALSGELSS-SLSVLPSDKRDLPA 698
Query: 92 GGACGSRCYPERS 104
G S C P R+
Sbjct: 699 CGKIRSNCIPRRN 711
Score = 52 (23.4 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 17/115 (14%), Positives = 51/115 (44%)
Query: 196 IKQSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSVTVAEKSG-FAQCAAETVD 254
+++ + ++ E++L + +S +++ L V E+ F + D
Sbjct: 990 VQEQVHKVSSRCEDESLLARCRSSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLVQSD 1049
Query: 255 RSIS-VGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
++ L +S + ++ PR L++ + T + +R+++P++K +++
Sbjct: 1050 LGVAHAELPQLTLSVPVAPEVSPRPTLESEELLVKTPGNYEGKRQRKPTKKLLES 1104
Score = 45 (20.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 62 CSNSDNS--SITSQASSKNLNVEDSHNATENSGGACGSRCYPER 103
C +D + I S+ ++ L E H +GG C ++C+ +R
Sbjct: 1587 CKATDENPCGIDSECINRMLLYE-CHPTVCPAGGRCQNQCFSKR 1629
Score = 43 (20.2 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 401 LRKGDVVKAARSFIVDKREKSDPILALENVSSFE 434
L++ D+++ + K ++SDP LE SFE
Sbjct: 786 LQQMDLLRNEETHFDSKVKQSDPDKILEKEPSFE 819
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 416 DKREKSDPILALENVSSFET 435
D + K ++ +NV+S+ T
Sbjct: 610 DSKTKEQRLMTAQNVASYRT 629
Score = 38 (18.4 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 334 ADGSNVVPADDGKEWTDINHFHTDLFDTLINMEKVMCKSNLAN 376
A N +P + +++ + D+ D+ +++M N+A+
Sbjct: 584 ASSQNHIPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAQNVAS 626
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 167 (63.8 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDL 773
W D S+KS G EDD N+D C +C +GGEL+CC+ CP FH C ++
Sbjct: 803 WPDA--SQKSPVHVGETRK-EDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTHF 859
Query: 774 PTGSWFCSNC 783
P+G W C+ C
Sbjct: 860 PSGEWICTFC 869
Score = 45 (20.9 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 25/105 (23%), Positives = 43/105 (40%)
Query: 178 RYLLKQNVDNSAVDDMDVIKQSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSV 237
RY QN+ A+ + + L K+ + A+P + SS++ T +SP++
Sbjct: 538 RYPPSQNIPRQAIKPNPL---QMAFLAQQAIKQWQISSGQATPTTASSSSS--TPSSPTI 592
Query: 238 TVAEKSGFAQCAAETVDRSISVGLDASNISFKLDAKMDPRSLLQN 282
T A ++ +D S VG + N+ D LL N
Sbjct: 593 TSAAGYDGKAFSSPMIDLSAPVG-GSYNLPSLPDIDCSSTILLDN 636
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 157 (60.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G + +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 885 RSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 944
Query: 782 NC 783
C
Sbjct: 945 FC 946
Score = 56 (24.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 19 RDEHQIFSE-VFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASS 76
+ H S+ V + +PG + C +G + E +D + S +L +S SS+T S+
Sbjct: 778 KSAHSFKSDQVKVKQEPGTEEEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST 835
Query: 77 KNLNVE---DSHNATEN 90
NL++E D+ EN
Sbjct: 836 -NLHLESELDTLTGLEN 851
Score = 39 (18.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDD 496
L P PS S G SG++A++ K+ + + +
Sbjct: 748 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKSAHSFKSDQVKVKQE 793
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 157 (60.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 631 RSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 690
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ + +S E C E+
Sbjct: 691 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHEL 739
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 740 SIEFQEPVPASIPNY 754
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 533 QVKVKQEPGTEDEICSFSGGVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 589
Query: 86 NA 87
+A
Sbjct: 590 DA 591
Score = 47 (21.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 40/166 (24%), Positives = 65/166 (39%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 494 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGGV 553
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ-----DADAS---GVQLEP---KEAQKQF 558
+ R + + S SLT + T + DA AS V++EP E+ KQ
Sbjct: 554 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQS 613
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+++ V G K+P SL +I G+ K + + D C +NG
Sbjct: 614 GLSSLVNG--KSPIRSLMHRSARIGGDGNNKDDDPNEDWCAVCQNG 657
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDE 112
+S S+ + V ++ S G+CGS E++SL +D+
Sbjct: 491 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQ 533
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 566 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 599
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 155 (59.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+S+ G + +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 738 RSSRIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 797
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ + +S E C E+
Sbjct: 798 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHEL 846
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 847 SIEFQEPVPASIPNY 861
Score = 56 (24.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 640 QVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 696
Query: 86 NA 87
+A
Sbjct: 697 DA 698
Score = 47 (21.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 41/166 (24%), Positives = 64/166 (38%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 601 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGAV 660
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ-----DADAS---GVQLEP---KEAQKQF 558
+ R + + S SLT + T + DA AS V+ EP E+ KQ
Sbjct: 661 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKTEPADTNESCKQS 720
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+++ V G K+P SL +I GS K + + D C +NG
Sbjct: 721 GLSSLVNG--KSPIRSLVHRSSRIGGDGSSKDDDPNEDWCAVCQNG 764
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDESLNAKRMKFSVDNLTYI 129
+S S+ + V ++ S G+CGS E++SL +D+ + K+ + D +
Sbjct: 598 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQ-VKVKQEPGTEDEICSF 656
Query: 130 KPKSGQVLTSTDILKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQNVDNSA 189
Q T D + +S S+ + + LHL ES + S L+ +V
Sbjct: 657 SGAVKQEKTE-DGRRSACMLSSPESSLTPPLSTNLHL-ESELDALAS----LENHVKTEP 710
Query: 190 VDDMDVIKQS 199
D + KQS
Sbjct: 711 ADTNESCKQS 720
Score = 38 (18.4 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 673 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 706
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 173 (66.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDL 773
W D S+KS AG + EDD N+D C +C +GGEL+CC+ CP FH +C ++ +
Sbjct: 807 WLDA--SQKSPLHAGEMRK-EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANF 863
Query: 774 PTGSWFCSNC 783
P+G W C+ C
Sbjct: 864 PSGEWICTFC 873
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 218 ASPISQESSATRLTVASPSVTVAEKSGFAQCAAETVDRSISVG 260
A+P + S+++ T +SP++T A + +D S VG
Sbjct: 579 AAPSTANSTSS--TPSSPTITSAAGYDAKAFGSPVIDLSSPVG 619
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 179 (68.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 250 CEKEGIQWEPKDDDDEEEEGGCEEEEDD-HMEFCRVCKDGGELLCCDACPSSYHLHCLNP 308
Query: 770 -IQDLPTGSWFCSNCTC 785
+ ++P G W C CTC
Sbjct: 309 PLPEIPNGEWLCPRCTC 325
Score = 136 (52.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSW 778
K R+ R + E D + D C +C GGE+I CD CP A+H CL ++ P G W
Sbjct: 187 KRRRKKKRIDDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKW 245
Query: 779 FCSNC 783
C +C
Sbjct: 246 SCPHC 250
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQEVGNKL 843
+ L C C YH CL + W C + +C + K+
Sbjct: 290 ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV 332
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 13 DDFEGSRDEHQIFSEV 28
DD +G +HQ + EV
Sbjct: 196 DDGDGYETDHQDYCEV 211
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 157 (60.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 724 KSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCS 781
+SA G +DD N+D C +C +GG+L+CC+ CP FH C ++ P+G W C+
Sbjct: 870 RSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT 929
Query: 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK--GAVSEAWFCNQSCQEV 839
C D + E +D C +H G+ + +S E C E+
Sbjct: 930 -----FCRD-IGKPEVE--YD---CDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHEL 978
Query: 840 GNKLGQGRVSALPNF 854
+ + +++PN+
Sbjct: 979 SIEFQEPVPASIPNY 993
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 27 EVFFRNDPGGTSKRCLVTGVINFEH-DDSKISDILLCSNSDNSSITSQASSKNLNVEDSH 85
+V + +PG + C +G + E +D + S +L +S SS+T S+ NL++E
Sbjct: 772 QVKVKQEPGTEDEICSFSGGVKQEKTEDGRRSACML--SSPESSLTPPLST-NLHLESEL 828
Query: 86 NA 87
+A
Sbjct: 829 DA 830
Score = 47 (21.6 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 40/166 (24%), Positives = 65/166 (39%)
Query: 451 LGTKTCPQFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXX 510
L P PS S G SG++A++ K+ + + + D
Sbjct: 733 LSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGGV 792
Query: 511 XXXXISEMRLTT-LSHSDIQSLTLDIKTEVQ-----DADAS---GVQLEP---KEAQKQF 558
+ R + + S SLT + T + DA AS V++EP E+ KQ
Sbjct: 793 KQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQS 852
Query: 559 LVNAAVQGSQKTP-SSLGSCHLQIAKRGS-KFEKTHHD-CDGSKNG 601
+++ V G K+P SL +I G+ K + + D C +NG
Sbjct: 853 GLSSLVNG--KSPIRSLMHRSARIGGDGNNKDDDPNEDWCAVCQNG 896
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 71 TSQASSKNLNVEDSHNATENSGGACGSRCYP-ERSSLEGGNDE 112
+S S+ + V ++ S G+CGS E++SL +D+
Sbjct: 730 SSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQ 772
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 248 CAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHI 284
C + + S++ L ++N+ L++++D + L+NH+
Sbjct: 805 CMLSSPESSLTPPL-STNLH--LESELDALASLENHV 838
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 166 (63.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 731 TVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNCTCWIC 788
T E DED N+D C +C +GGELICCD CP FH +C S+ P+G W+C+ +C
Sbjct: 688 TPEADEDP-NEDWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCT-----LC 741
Query: 789 GDLVNDKEASSSFDAL-KCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEVGNKLGQGR 847
DL N E + +A + + H E + + E C E+ +
Sbjct: 742 RDL-NSPEMQYNVNAGGESKDLKQDLHSETFTHVDRRKC-ERLLLRLYCNELSTDFQEPI 799
Query: 848 V-SALPNFS 855
S++P +S
Sbjct: 800 TPSSMPEYS 808
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 116 AKRMKFSVDNLTYIKPKSGQVLTSTDILKGTVAGTSCPST 155
A+ +FS ++T +PK+G V S + +G S PST
Sbjct: 595 AQGRQFSQMSVTSSEPKTGSV--SWKRAEAPQSGPSNPST 632
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 160 (61.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CC++CP+AFH+ CL+I+ +P GSWFC++C
Sbjct: 1393 CFVCSEGGSLLCCESCPAAFHRECLNIE-MPQGSWFCNDC 1431
Score = 140 (54.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLPTGSW 778
K R+ + +++ + +D C CGDGG+++ C CP +H CL++ P G W
Sbjct: 1780 KLRRKVSGKRKSQSEVTKEREDECFYCGDGGQIVSCKKPGCPKVYHADCLNLSKRPAGRW 1839
Query: 779 FCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
C C CG +EA+S + S CE H E + +SK
Sbjct: 1840 ECPWHQCNECG-----REAASYCEMCPNSYCEQ--HREGMLFISK 1877
Score = 55 (24.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 140 TDI--LKGTVAGTSCPSTDSVFRTVALHLVESSNQGITSGRYLLKQNVDNSAVDDMDVIK 197
TD+ LK + S P D + + L ESS+ G + G + + + ++ +I
Sbjct: 558 TDVKCLKNSKLKKSTPK-DKTLKATSSRLKESSSPGSSDGSFAMHSHYLPAS---SGLIV 613
Query: 198 QSLPRLDGHDGKEAILGKA--IASPISQESSATRLTVASPSVTVAEKSGFAQCAAETVDR 255
++L G + KE L SP S+ SS T ++ + V S + + E+VD
Sbjct: 614 RALAA--GEETKEKDLSHEPNSHSPSSEHSSQTNHELSKQNWEVKNNS---ESSEESVDA 668
Query: 256 SIS 258
S S
Sbjct: 669 SDS 671
Score = 40 (19.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 50 EHDDSKISDILLCSNSDNSSITSQASS 76
E +SK+++ + S++ +SSI S + S
Sbjct: 700 EESESKVNNESMFSDTSSSSIPSPSIS 726
Score = 40 (19.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 117 KRMK-FSVDNLTYIKPKSGQVLTSTDILK 144
KR K F + IKPKS QV ++ D +K
Sbjct: 909 KRWKTFESELGKSIKPKSDQVDSTLDEVK 937
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 250 AETVDRSISVGLDASNISFKLDAKMDP 276
A+T +S S LDA+ S K AK DP
Sbjct: 193 AKTETQS-SHRLDANKHSSKNTAKSDP 218
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 168 (64.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 716 WSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDL 773
W D S+KS G EDD N+D C +C +GGEL+CC+ CP FH +C ++ +
Sbjct: 806 WLDA--SQKSPLHVGETRK-EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANF 862
Query: 774 PTGSWFCSNC 783
P+G W C+ C
Sbjct: 863 PSGEWICTFC 872
Score = 40 (19.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 214 GKAIASPISQESSATRLTVASPSVTVAEKSGFAQCAAETVDRSISVG 260
G+A AS + SS T +SP++T A + +D S VG
Sbjct: 576 GQAAASTANSTSS----TPSSPTITSAAGYDAKAFGSPMIDLSSPVG 618
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 158 (60.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC++CP+AFH CL+I D+P GSWFC++C
Sbjct: 828 CFVCSKGGSLLCCESCPAAFHPDCLNI-DMPDGSWFCNDC 866
Score = 148 (57.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 706 KPFTLCQLQAWSDEY-KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSA 762
+P T L SDE K K TR + +++D C CGDGG+L+ CD +C A
Sbjct: 1199 RPKTSASLS--SDEKGKKTKKRTRRRRTRGEGKKESEDECFRCGDGGQLVLCDRKSCTKA 1256
Query: 763 FHQACLSIQDLPTGSWFCSNCTCWICG 789
+H +CL + P G W C C +CG
Sbjct: 1257 YHLSCLGLGKRPFGKWECPWHHCDVCG 1283
Score = 126 (49.4 bits), Expect = 0.00079, P = 0.00079
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 739 KNDDSCGICGDGGELICCDN-CPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEA 797
K + C +C G L+ C+ C AFH ACL + P G + CS C I V KE+
Sbjct: 659 KKEYVCQLCEKTGSLVLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGIHSCFVC-KES 717
Query: 798 SSSFDALKCSQCEHKYHGECLK 819
+ SQC YH C++
Sbjct: 718 KTDVKRCVVSQCGKFYHEACVR 739
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 158 (60.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC++CP+AFH CL+I D+P GSWFC++C
Sbjct: 831 CFVCSKGGSLLCCESCPAAFHPDCLNI-DMPDGSWFCNDC 869
Score = 148 (57.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 706 KPFTLCQLQAWSDEY-KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSA 762
+P T L SDE K K TR + +++D C CGDGG+L+ CD +C A
Sbjct: 1202 RPKTSASLS--SDEKGKKTKKRTRRRRTRGEGKKESEDECFRCGDGGQLVLCDRKSCTKA 1259
Query: 763 FHQACLSIQDLPTGSWFCSNCTCWICG 789
+H +CL + P G W C C +CG
Sbjct: 1260 YHLSCLGLGKRPFGKWECPWHHCDVCG 1286
Score = 126 (49.4 bits), Expect = 0.00079, P = 0.00079
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 739 KNDDSCGICGDGGELICCDN-CPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEA 797
K + C +C G L+ C+ C AFH ACL + P G + CS C I V KE+
Sbjct: 662 KKEYVCQLCEKTGSLVLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGIHSCFVC-KES 720
Query: 798 SSSFDALKCSQCEHKYHGECLK 819
+ SQC YH C++
Sbjct: 721 KTDVKRCVVSQCGKFYHEACVR 742
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 162 (62.1 bits), Expect = 3.4e-07, Sum P(4) = 3.4e-07
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1442 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1480
Score = 146 (56.5 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K ++ R E ++ +D C CGD G+L+ C CP +H CL++ P
Sbjct: 1828 SKKFKKKQQGKRRTQGEITKE--REDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRP 1885
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C ICG KEA+S + S C K H E + +SK
Sbjct: 1886 AGKWECPWHQCDICG-----KEAASFCEMCPSSFC--KQHREGMLFISK 1927
Score = 56 (24.8 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 49/213 (23%), Positives = 85/213 (39%)
Query: 52 DDSKISD-ILLCSNSDNSS-----ITSQASSKN--LNVEDSHNATENSGGACGSRC---- 99
D+ K SD I +C+ SD+ S I + + S N L + D+ + TEN +
Sbjct: 359 DEEKRSDSISICTTSDDGSSDLDPIDNSSESDNSVLEITDAFDRTENMLSVQKNEKVKYT 418
Query: 100 -YPERSSLEGGNDESL-NAKRMKFSVDNLTYIKP--KSGQVLTSTDILKGTVAGTSCPST 155
YP ++ +SL +D ++P ++ QV S D+ V P +
Sbjct: 419 RYPATNTKVKAKQKSLITNSHTDHLMDCAKTVEPGTETSQVNLS-DLKVSAVVRK--PQS 475
Query: 156 DSVFRTVALHLVESSNQGITSGRYLLKQNVDNSAVDDMDVIKQSLPRLDGHDGKEAILGK 215
D FR + ++ I+S L+K N A+ K P++ K
Sbjct: 476 D--FRNDSFSPKFNTPSSISSENSLIKSGATNQALLHA---KSKQPKIRSIKCKHKENPV 530
Query: 216 AIASPISQESSATRL----TVASPSVTVAEKSG 244
+ P++ E + + T SP +++ KSG
Sbjct: 531 VVEPPVTNEDCSLKCCSSDTKGSPLASIS-KSG 562
Score = 55 (24.4 bits), Expect = 3.4e-07, Sum P(4) = 3.4e-07
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 35 GGTSKRCLVTGVINFEHDDSKISDILLCSNSDNSS--ITSQASSKNLNVEDSHNATENSG 92
G ++RC+ + + +D D C+N S + K+L + H+A E
Sbjct: 167 GSKNRRCVSSSIKLDSEEDMPFED---CTNDPESEHDLLLNGCLKSLAFDSEHSADEKEK 223
Query: 93 GACGSRCY-----PERSSLEGGN 110
SR P+R+S++ G+
Sbjct: 224 PCAKSRARKSSDNPKRTSMKKGH 246
Score = 52 (23.4 bits), Expect = 3.4e-07, Sum P(4) = 3.4e-07
Identities = 18/115 (15%), Positives = 52/115 (45%)
Query: 196 IKQSLPRLDGHDGKEAILGKAIASPISQESSATRL--TVASPSVTVAEKSGFAQCAAETV 253
+++ + ++ +E++L + +S +++ L T P V E A++
Sbjct: 1036 VQEQVHKVSSRCEEESLLARCRSSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSE 1095
Query: 254 DRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
L +S + ++ PR +L++ + T + +R+++P++K +++
Sbjct: 1096 LGGGHAELPQLTLSVPVAPEVSPRPILESEELLVKTPGNYESKRQRKPTKKLLES 1150
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 656 KDDAVIKDGLVTNNGIICKCCN 677
K++ V+ + VTN KCC+
Sbjct: 526 KENPVVVEPPVTNEDCSLKCCS 547
Score = 43 (20.2 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 334 ADGSNVVPADDGKEWTDINHFHTDLFDTLINMEKVMCKSNLAN 376
A G N +P + +++ + D+ D+ +++M NL +
Sbjct: 624 ASGQNHIPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAQNLVS 666
Score = 41 (19.5 bits), Expect = 3.4e-07, Sum P(4) = 3.4e-07
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 784 TCWICGDLVNDKEASSSFDALKCSQCEHK 812
TCW G + K ++ AL + HK
Sbjct: 2394 TCWSLGRGQDPKPEQNTLPALNQAPSSHK 2422
Score = 40 (19.1 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 590 KTHHDCDGSKN-GQKRPVTCRIKD 612
K+H DC +N G+ +P + +++D
Sbjct: 741 KSHSDCVTRRNCGRSKP-SSKLRD 763
Score = 39 (18.8 bits), Expect = 6.1e-06, Sum P(4) = 6.1e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 219 SPISQESSATRLTVASPSVTVAE 241
+P S+ T T ASP TV E
Sbjct: 1227 TPGSEGELMTHRTAASPKETVEE 1249
>UNIPROTKB|J9P6F3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AAEX03010393 Ensembl:ENSCAFT00000048373
Uniprot:J9P6F3
Length = 850
Score = 155 (59.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C + ++ K+ K + ++ + ++D C CGDGGEL+ CD +CP A+
Sbjct: 700 RPKSTC-VSTTEEKAKNAKLKQKRRKIKAEPKQMHEDYCFQCGDGGELVMCDKKDCPKAY 758
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C C A+ SF C C H + C KD +
Sbjct: 759 HLLCLNLTQPPYGKWECPWHQCEECSS------AAVSF----CEFCPHSF---C-KDHEE 804
Query: 824 GAV 826
GA+
Sbjct: 805 GAL 807
Score = 137 (53.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 39/130 (30%), Positives = 62/130 (47%)
Query: 658 DAVIKDG--LVTNNGIICKCCNLVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQL 713
DA I G +++ +IC + S S I+ GF C +V + P +
Sbjct: 242 DACIAAGSIFISSYNLICSNHSKRKSSSSSAINVGFC--FVCARGLIVQDHSDP--MFSS 297
Query: 714 QAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDL 773
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI+ +
Sbjct: 298 YAYKSHYLLNES-NRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIE-M 355
Query: 774 PTGSWFCSNC 783
P G W C++C
Sbjct: 356 PEGCWNCNDC 365
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 172 (65.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 730 GTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNC 783
G VE +EDD + + C +C DGGEL+CCD CPS++H CL+ + D+P G W C C
Sbjct: 447 GDVE-EEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRC 501
Score = 140 (54.3 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 721 KSRKSATRAGTVETDEDD-KND--DSCGICGDGGELICCDNCPSAFHQACLS--IQDLPT 775
K KS+ + ++ D D + D D C +C GGE+I CD CP A+H CL ++ P
Sbjct: 352 KKAKSSKKKKKMDEDADGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPE 411
Query: 776 GSWFCSNC 783
G+W C +C
Sbjct: 412 GTWSCPHC 419
Score = 49 (22.3 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 802 DALKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ L C C YH CL + W C
Sbjct: 468 ELLCCDTCPSSYHLHCLNPPLPDIPNGEWIC 498
Score = 40 (19.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 12 DDDFEGSRDEHQIFSEV 28
D+D +G +HQ + EV
Sbjct: 364 DEDADGYETDHQDYCEV 380
Score = 38 (18.4 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 186 DNSAVDDM-DVIKQSLPRLDGHDGKEAILGK-AIASPISQESSATR--LTVASPSVTVAE 241
D + M D I++ + D K+ K + S S+ R + V+SP V A
Sbjct: 7 DRDRFEPMGDDIEEQISETDTPKSKKKKKAKKSRESRTSKRQKVIREEIAVSSPEVMEAI 66
Query: 242 KSGFAQCAAETVDRSISVGLD 262
+ + + V RS S G D
Sbjct: 67 RMAEGEEEEDRVMRSESEGSD 87
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 162 (62.1 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1407 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1445
Score = 147 (56.8 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K ++ R E ++ +D C CGD G+L+ C CP +H CL++ P
Sbjct: 1793 SKKFKKKQQGKRRTQGEVTKE--REDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRP 1850
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C ICG KEA+S + S C K H E + +SK
Sbjct: 1851 AGKWECPWHQCDICG-----KEAASFCEMCPSSFC--KQHREGMLFISK 1892
Score = 54 (24.1 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 25/109 (22%), Positives = 49/109 (44%)
Query: 520 LTTLSHSD-IQSLT--LDIKTEVQDADASGVQLEP--KEAQKQFLVNAAVQGSQKTPSSL 574
L T SH+D + T + TE + + +++ ++ Q F N + TPSS+
Sbjct: 394 LITNSHTDHLTDCTKIAEPGTETSQVNIADLKVSTLVRKPQSDFR-NDGLSPKFNTPSSI 452
Query: 575 GSCHLQIAKRGSKFEKTHHDCDGSKNGQKRPVTCRIKDDDLLGGELIKN 623
+ + K G+ + H SK + R + C+ K++ ++G + N
Sbjct: 453 SGDN-SLIKGGATNQALLHS--KSKQPKIRSIKCKHKENPVVGEPPVAN 498
Score = 52 (23.4 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 52 DDSKISD-ILLCSNSDNSS-----ITSQASSKN--LNVEDSHNATEN 90
D+ K SD I +C+ SD+ S I + S N L + D+ + TEN
Sbjct: 319 DEEKRSDSISICTTSDDGSSDLDPIDHSSESDNSVLEITDTFDRTEN 365
Score = 50 (22.7 bits), Expect = 9.7e-07, Sum P(4) = 9.7e-07
Identities = 18/115 (15%), Positives = 51/115 (44%)
Query: 196 IKQSLPRLDGHDGKEAILGKAIASPISQESSATRL--TVASPSVTVAEKSGFAQCAAETV 253
+++ + ++ +E++L + +S +++ L T P V E A++
Sbjct: 996 VQEQVHKVSSRCEEESLLARCRSSAQNKQVEENSLISTKEEPPVLEREAPFLEGPLAQSE 1055
Query: 254 DRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
L +S + ++ PR L++ + T + +R+++P++K +++
Sbjct: 1056 VGGGHAELPQLTLSVPVALEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLES 1110
Score = 41 (19.5 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 784 TCWICGDLVNDKEASSSFDALKCSQCEHK 812
TCW G + K ++ AL + HK
Sbjct: 2359 TCWSLGRGQDPKPEQNTLPALNQAPSSHK 2387
Score = 41 (19.5 bits), Expect = 7.2e-06, Sum P(4) = 7.2e-06
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 334 ADGSNVVPADDGKEWTDINHFHTDLFDTLINMEKVMCKSNLAN 376
A G N +P + +++ + D+ D+ +++M NL +
Sbjct: 584 ASGQNHMPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAQNLVS 626
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 656 KDDAVIKDGLVTNNGIICKCCN 677
K++ V+ + V N KCC+
Sbjct: 486 KENPVVGEPPVANEDCSLKCCS 507
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 161 (61.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
EDD N+D C +C +GGEL+CC+ CP FH +C S+ P+G W C+ C
Sbjct: 699 EDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPSLMSFPSGEWICTFC 748
Score = 43 (20.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 218 ASPISQESSATRLTVASPSVTVAEKSGFAQCAAETVDRSISVG----------LDAS-NI 266
++ I+ SS T T +SP+VT A +D S VG +D S NI
Sbjct: 457 STAITTASSITS-TPSSPTVTSAAGCDGKTYGPPVIDLSSPVGSSYNLPSLPDIDCSGNI 515
Query: 267 SFKLDAKMDPRSLLQNH 283
+ A+ D + QNH
Sbjct: 516 TLDTVARKDDGTAEQNH 532
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 155 (59.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 162 (62.1 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1711 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1749
Score = 146 (56.5 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K ++ R E ++ +D C CGD G+L+ C CP +H CL++ P
Sbjct: 2097 SKKFKKKQQGKRRTQGEITKE--REDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRP 2154
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C ICG KEA+S + S C K H E + +SK
Sbjct: 2155 AGKWECPWHQCDICG-----KEAASFCEMCPSSFC--KQHREGMLFISK 2196
Score = 56 (24.8 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 49/213 (23%), Positives = 85/213 (39%)
Query: 52 DDSKISD-ILLCSNSDNSS-----ITSQASSKN--LNVEDSHNATENSGGACGSRC---- 99
D+ K SD I +C+ SD+ S I + + S N L + D+ + TEN +
Sbjct: 628 DEEKRSDSISICTTSDDGSSDLDPIDNSSESDNSVLEITDAFDRTENMLSVQKNEKVKYT 687
Query: 100 -YPERSSLEGGNDESL-NAKRMKFSVDNLTYIKP--KSGQVLTSTDILKGTVAGTSCPST 155
YP ++ +SL +D ++P ++ QV S D+ V P +
Sbjct: 688 RYPATNTKVKAKQKSLITNSHTDHLMDCAKTVEPGTETSQVNLS-DLKVSAVVRK--PQS 744
Query: 156 DSVFRTVALHLVESSNQGITSGRYLLKQNVDNSAVDDMDVIKQSLPRLDGHDGKEAILGK 215
D FR + ++ I+S L+K N A+ K P++ K
Sbjct: 745 D--FRNDSFSPKFNTPSSISSENSLIKSGATNQALLHA---KSKQPKIRSIKCKHKENPV 799
Query: 216 AIASPISQESSATRL----TVASPSVTVAEKSG 244
+ P++ E + + T SP +++ KSG
Sbjct: 800 VVEPPVTNEDCSLKCCSSDTKGSPLASIS-KSG 831
Score = 55 (24.4 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 35 GGTSKRCLVTGVINFEHDDSKISDILLCSNSDNSS--ITSQASSKNLNVEDSHNATENSG 92
G ++RC+ + + +D D C+N S + K+L + H+A E
Sbjct: 436 GSKNRRCVSSSIKLDSEEDMPFED---CTNDPESEHDLLLNGCLKSLAFDSEHSADEKEK 492
Query: 93 GACGSRCY-----PERSSLEGGN 110
SR P+R+S++ G+
Sbjct: 493 PCAKSRARKSSDNPKRTSMKKGH 515
Score = 52 (23.4 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 18/115 (15%), Positives = 52/115 (45%)
Query: 196 IKQSLPRLDGHDGKEAILGKAIASPISQESSATRL--TVASPSVTVAEKSGFAQCAAETV 253
+++ + ++ +E++L + +S +++ L T P V E A++
Sbjct: 1305 VQEQVHKVSSRCEEESLLARCRSSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSE 1364
Query: 254 DRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
L +S + ++ PR +L++ + T + +R+++P++K +++
Sbjct: 1365 LGGGHAELPQLTLSVPVAPEVSPRPILESEELLVKTPGNYESKRQRKPTKKLLES 1419
Score = 43 (20.2 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 656 KDDAVIKDGLVTNNGIICKCCN 677
K++ V+ + VTN KCC+
Sbjct: 795 KENPVVVEPPVTNEDCSLKCCS 816
Score = 43 (20.2 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 334 ADGSNVVPADDGKEWTDINHFHTDLFDTLINMEKVMCKSNLAN 376
A G N +P + +++ + D+ D+ +++M NL +
Sbjct: 893 ASGQNHIPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAQNLVS 935
Score = 41 (19.5 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 784 TCWICGDLVNDKEASSSFDALKCSQCEHK 812
TCW G + K ++ AL + HK
Sbjct: 2663 TCWSLGRGQDPKPEQNTLPALNQAPSSHK 2691
Score = 40 (19.1 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 590 KTHHDCDGSKN-GQKRPVTCRIKD 612
K+H DC +N G+ +P + +++D
Sbjct: 1010 KSHSDCVTRRNCGRSKP-SSKLRD 1032
Score = 39 (18.8 bits), Expect = 9.2e-06, Sum P(4) = 9.2e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 219 SPISQESSATRLTVASPSVTVAE 241
+P S+ T T ASP TV E
Sbjct: 1496 TPGSEGELMTHRTAASPKETVEE 1518
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 155 (59.6 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C + ++ K+ K + ++ + ++D C CGDGGEL+ CD +CP A+
Sbjct: 1288 RPKSTC-VSTTEEKAKNAKLKQKRRKIKAEPKQMHEDYCFQCGDGGELVMCDKKDCPKAY 1346
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C C A+ SF C C H + C KD +
Sbjct: 1347 HLLCLNLTQPPYGKWECPWHQCEECSS------AAVSF----CEFCPHSF---C-KDHEE 1392
Query: 824 GAV 826
GA+
Sbjct: 1393 GAL 1395
Score = 137 (53.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/130 (30%), Positives = 62/130 (47%)
Query: 658 DAVIKDG--LVTNNGIICKCCNLVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQL 713
DA I G +++ +IC + S S I+ GF C +V + P +
Sbjct: 829 DACIAAGSIFISSYNLICSNHSKRKSSSSSAINVGFC--FVCARGLIVQDHSDP--MFSS 884
Query: 714 QAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDL 773
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI+ +
Sbjct: 885 YAYKSHYLLNES-NRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIE-M 942
Query: 774 PTGSWFCSNC 783
P G W C++C
Sbjct: 943 PEGCWNCNDC 952
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 155 (59.6 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 286 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 321
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 152 (58.6 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C IC GG L+CC++CP+AFH CL+I +P GSWFC++C
Sbjct: 926 CFICSKGGRLLCCESCPAAFHPDCLNIA-MPDGSWFCNDC 964
Score = 136 (52.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 36/107 (33%), Positives = 51/107 (47%)
Query: 735 DEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLV 792
+E K++D C CGDGG+L+ CD C A+H +CL P G W C C +CG
Sbjct: 1321 NEGKKSEDECFRCGDGGQLVLCDKKGCTKAYHLSCLDRTKRPFGRWDCPWHHCDVCG--- 1377
Query: 793 NDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQ-SCQE 838
+ S++F C C + + C K +GA+ Q CQE
Sbjct: 1378 ---KNSAAF----CQLCPNSF---C-KAHQEGALRSHPLTGQLCCQE 1413
Score = 55 (24.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 198 QSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSVTV 239
+ +P+L + +L K + P+SQ +S R T SP +TV
Sbjct: 89 EKIPKLCAAPAGQPLL-KGV-EPVSQHASPPRKTSVSPELTV 128
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 154 (59.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC++CP+AFH CL+I+ +P GSWFC++C
Sbjct: 830 CFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDC 868
Score = 147 (56.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P T L + D+ K K TR + + +++D C CGDGG+L+ CD +C A+
Sbjct: 1201 RPKTSAALSS-EDKGKRAKKRTRRRRSKGEGKKRSEDECFRCGDGGQLVLCDRKSCTKAY 1259
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICG 789
H CL + P G W C C +CG
Sbjct: 1260 HLPCLGLGKRPFGKWECPWHHCDVCG 1285
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 155 (59.6 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 157 (60.3 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 21/40 (52%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CC++CP+AFH+ CL+I+ +P GSW+C++C
Sbjct: 1314 CFVCSEGGSLLCCESCPAAFHRECLNIE-MPEGSWYCNDC 1352
Score = 149 (57.5 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 43/130 (33%), Positives = 61/130 (46%)
Query: 697 CLN-LVMESGKPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELIC 755
C N L + +P TL + + S + K R R E ++ +D C CGDGG+L+
Sbjct: 1685 CANTLSVPQSQP-TLSEEK--SKKLKRRPQMKRRSQAEVMKE--REDECFSCGDGGQLVS 1739
Query: 756 CDN--CPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKY 813
C CP +H CL++ P G W C C +CG KEA+S + S C K
Sbjct: 1740 CKKAGCPKVYHADCLNLTKRPAGKWECPWHQCDMCG-----KEAASFCEMCPRSFC--KQ 1792
Query: 814 HGECLKDMSK 823
H E + +SK
Sbjct: 1793 HREGMLFISK 1802
Score = 132 (51.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 741 DDSCGICGDGGELICCD-NCPSAFHQACLSIQDLPTGSWFCSNC-----TCWICGDLVND 794
++ C IC GEL+ C+ C AFH CL + ++PTG + C+ C TC++C
Sbjct: 1147 ENVCQICEKPGELLLCEAQCCGAFHLQCLGLSEMPTGKFICNECSTGVHTCFVC------ 1200
Query: 795 KEASSSFDALKCSQCEHKYHGECLK 819
K C YH EC++
Sbjct: 1201 KNCGQDVKRCLLPLCGKYYHEECIQ 1225
Score = 58 (25.5 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 214 GKAIASPISQESSATRLTVASPSVTVAEKSGFAQCAAETVDRSISVGLDASNISF 268
G A S + SS T L++ P + EK+G CA ETV + S SN SF
Sbjct: 538 GTADGSGGNSASSLTSLSIVGPPFKI-EKNG--DCAQETVSPNSS---SISNSSF 586
Score = 43 (20.2 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 539 VQDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL-QIAKRGSKFEKTHHDCDG 597
V + AS + E ++ +++ V+ + + + L +L +I +R T C
Sbjct: 666 VHGSVASPLGNEAEDTERKESVDLTEHSTDEDSACLSDDNLGRIGRRPEAGRNTER-CAS 724
Query: 598 SKNGQKRPVTCRIKDDDLLGGE 619
++NG+ + + LG E
Sbjct: 725 AENGESPDLDSEANSESSLGDE 746
Score = 40 (19.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 17/71 (23%), Positives = 27/71 (38%)
Query: 63 SNSDNSSITSQASSKNLNVEDSHNATENSG--GACGSRCYPERSSLEGGNDESLNAKRMK 120
S+ NSS + +K N+ G G+ C P+R+ + L K
Sbjct: 579 SSISNSSFSRNPPAKLPGSGTGKREPANAAVSGTNGTNCVPKRNCSKSKQSTKLGDK--- 635
Query: 121 FSVDNLTYIKP 131
+V N +KP
Sbjct: 636 -TVSNRKDLKP 645
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 421 SDPILALENVSSFETHCSQRDLPVHFDDATLGTKTCPQFDPSVHEVV--SSGVTEQSGQS 478
S P E+ E CS +L H D + + + E+V SS V+E S S
Sbjct: 935 STPFSTKESPPILEAECSFSELEPHASDPS---EQLIEGQSDFPELVLSSSDVSEVSA-S 990
Query: 479 ADEGRKCIKAS 489
D + +K S
Sbjct: 991 PDAEERFLKNS 1001
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 155 (59.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 168 (64.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS- 769
C+ + E K + G E +EDD + + C +C DGGEL+CCD CPS++H CL+
Sbjct: 317 CEKEGIQWEPKEEEDEEEEGG-EEEEDD-HMEFCRVCKDGGELLCCDTCPSSYHLHCLNP 374
Query: 770 -IQDLPTGSWFCSNCT 784
+ ++P G W C CT
Sbjct: 375 PLPEIPNGEWLCPRCT 390
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 416 DKREKSDPILALENVSSFETHCS 438
++RE+SD A N SS + CS
Sbjct: 224 EEREESDFDSASINSSSVRSECS 246
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 157 (60.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 21/40 (52%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CC++CP+AFH+ CL+I+ +P GSW+C++C
Sbjct: 1421 CFVCSEGGSLLCCESCPAAFHRECLNIE-MPEGSWYCNDC 1459
Score = 149 (57.5 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 43/130 (33%), Positives = 61/130 (46%)
Query: 697 CLN-LVMESGKPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELIC 755
C N L + +P TL + + S + K R R E ++ +D C CGDGG+L+
Sbjct: 1792 CANTLSVPQSQP-TLSEEK--SKKLKRRPQMKRRSQAEVMKE--REDECFSCGDGGQLVS 1846
Query: 756 CDN--CPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKY 813
C CP +H CL++ P G W C C +CG KEA+S + S C K
Sbjct: 1847 CKKAGCPKVYHADCLNLTKRPAGKWECPWHQCDMCG-----KEAASFCEMCPRSFC--KQ 1899
Query: 814 HGECLKDMSK 823
H E + +SK
Sbjct: 1900 HREGMLFISK 1909
Score = 132 (51.5 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 741 DDSCGICGDGGELICCD-NCPSAFHQACLSIQDLPTGSWFCSNC-----TCWICGDLVND 794
++ C IC GEL+ C+ C AFH CL + ++PTG + C+ C TC++C
Sbjct: 1254 ENVCQICEKPGELLLCEAQCCGAFHLQCLGLSEMPTGKFICNECSTGVHTCFVC------ 1307
Query: 795 KEASSSFDALKCSQCEHKYHGECLK 819
K C YH EC++
Sbjct: 1308 KNCGQDVKRCLLPLCGKYYHEECIQ 1332
Score = 58 (25.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 214 GKAIASPISQESSATRLTVASPSVTVAEKSGFAQCAAETVDRSISVGLDASNISF 268
G A S + SS T L++ P + EK+G CA ETV + S SN SF
Sbjct: 643 GTADGSGGNSASSLTSLSIVGPPFKI-EKNG--DCAQETVSPNSS---SISNSSF 691
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 539 VQDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL-QIAKRGSKFEKTHHDCDG 597
V + AS + E ++ +++ V+ + + + L +L +I +R T C
Sbjct: 771 VHGSVASPLGNEAEDTERKESVDLTEHSTDEDSACLSDDNLGRIGRRPEAGRNTER-CAS 829
Query: 598 SKNGQKRPVTCRIKDDDLLGGE 619
++NG+ + + LG E
Sbjct: 830 AENGESPDLDSEANSESSLGDE 851
Score = 40 (19.1 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 17/71 (23%), Positives = 27/71 (38%)
Query: 63 SNSDNSSITSQASSKNLNVEDSHNATENSG--GACGSRCYPERSSLEGGNDESLNAKRMK 120
S+ NSS + +K N+ G G+ C P+R+ + L K
Sbjct: 684 SSISNSSFSRNPPAKLPGSGTGKREPANAAVSGTNGTNCVPKRNCSKSKQSTKLGDK--- 740
Query: 121 FSVDNLTYIKP 131
+V N +KP
Sbjct: 741 -TVSNRKDLKP 750
Score = 38 (18.4 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 421 SDPILALENVSSFETHCSQRDLPVHFDDATLGTKTCPQFDPSVHEVV--SSGVTEQSGQS 478
S P E+ E CS +L H D + + + E+V SS V+E S S
Sbjct: 1040 STPFSTKESPPILEAECSFSELEPHASDPS---EQLIEGQSDFPELVLSSSDVSEVSA-S 1095
Query: 479 ADEGRKCIKAS 489
D + +K S
Sbjct: 1096 PDAEERFLKNS 1106
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 162 (62.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1748
Score = 146 (56.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K ++ R E ++ +D C CGD G+L+ C CP +H CL++ P
Sbjct: 2096 SKKFKKKQQGKRRTQGEITKE--REDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRP 2153
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C ICG KEA+S + S C K H E + +SK
Sbjct: 2154 AGKWECPWHQCDICG-----KEAASFCEMCPSSFC--KQHREGMLFISK 2195
Score = 54 (24.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 21/85 (24%), Positives = 35/85 (41%)
Query: 34 PGGTSKRCLVTGVINFE-HDDSKISDILLCSNSDNSS--ITSQASSKNLNVEDSHNATEN 90
P G+ R + G I + +D D C+N S + K+L + H+A E
Sbjct: 434 PKGSKNRKCIPGSIKLDSEEDMPFED---CTNDPESEHDLLLNGCLKSLAFDSEHSADEK 490
Query: 91 SGGACGSRCY-----PERSSLEGGN 110
SR P+R+S++ G+
Sbjct: 491 EKPCAKSRARKSSDNPKRTSVKKGH 515
Score = 52 (23.4 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 52 DDSKISD-ILLCSNSDNSS-----ITSQASSKN--LNVEDSHNATEN 90
D+ K SD I +C+ SD+ S I + S N L + D+ + TEN
Sbjct: 628 DEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEIPDAFDRTEN 674
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 18/115 (15%), Positives = 51/115 (44%)
Query: 196 IKQSLPRLDGHDGKEAILGKAIASPISQESSATRL--TVASPSVTVAEKSGFAQCAAETV 253
+++ + ++ +E++L + +S +++ L T P V E A++
Sbjct: 1301 VQEQVHKVSSRCEEESLLARGRSSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSE 1360
Query: 254 DRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
L +S + ++ PR L++ + T + +R+++P++K +++
Sbjct: 1361 LGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLES 1415
Score = 42 (19.8 bits), Expect = 5.9e-06, Sum P(4) = 5.9e-06
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 217 IASPISQESSATRLTVASPSVTVAEKS 243
+ P+++++ A L A P + V +KS
Sbjct: 1214 LEEPLTEQNHADCLDSAGPRLNVCDKS 1240
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 784 TCWICGDLVNDKEASSSFDALKCSQCEHK 812
TCW G + K ++ AL + HK
Sbjct: 2661 TCWSLGRGQDPKPEQNTLPALNQAPSSHK 2689
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 162 (62.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1713 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1751
Score = 147 (56.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K ++ R E ++ +D C CGD G+L+ C CP +H CL++ P
Sbjct: 2099 SKKFKKKQQGKRRTQGEVTKE--REDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRP 2156
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C ICG KEA+S + S C K H E + +SK
Sbjct: 2157 AGKWECPWHQCDICG-----KEAASFCEMCPSSFC--KQHREGMLFISK 2198
Score = 55 (24.4 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 22/85 (25%), Positives = 35/85 (41%)
Query: 34 PGGTSKRCLVTGVINFE-HDDSKISDILLCSNSDNSS--ITSQASSKNLNVEDSHNATEN 90
P G+ R VT I + +D D C+N S + K+L + H+A E
Sbjct: 434 PKGSKNRKCVTSSIKLDSEEDMPFED---CTNDPESEHDLLLNGCLKSLAFDSEHSADEK 490
Query: 91 SGGACGSRCY-----PERSSLEGGN 110
SR P+R+S++ G+
Sbjct: 491 EKPCAKSRARKSSDNPKRTSVKKGH 515
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 334 ADGSNVVPADDGKEWTDINHFHTDLFDTLINMEKVMCKSNLAN 376
A G N +P + +++ + D+ D+ +++M NL +
Sbjct: 893 ASGQNHIPIEPDYKFSTLLMMLKDMHDSKTKEQRIMTAQNLVS 935
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 784 TCWICGDLVNDKEASSSFDALKCSQCEHK 812
TCW G + K S+ AL + HK
Sbjct: 2663 TCWSLGRGKDPKPEQSTLPALNQAPSSHK 2691
Score = 41 (19.5 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 7/43 (16%), Positives = 24/43 (55%)
Query: 266 ISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
+S + ++ PR L++ + + +R+++P++K +++
Sbjct: 1376 LSVPVAPEVSPRPALESEELLVKPPGNYESKRQRKPTKKLLES 1418
Score = 41 (19.5 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 47 INFEHDDSKISDILLCSNSDNSSITSQASSKNLNVEDSHNATENSGG 93
++ H+ + + L N +I Q +S NL+ +D +++ ++ G
Sbjct: 244 VDGSHEKAALLPAPLSLGDTNVTIEEQLNSINLSFQDDPDSSTSTLG 290
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 219 SPISQESSATRLTVASPSVTVAE 241
+P S+ T T ASP TV E
Sbjct: 1498 TPNSEGELMTHRTAASPKETVEE 1520
Score = 39 (18.8 bits), Expect = 4.7e-06, Sum P(4) = 4.7e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 656 KDDAVIKDGLVTNNGIICKCCN 677
K++ V+ + V N KCC+
Sbjct: 795 KENPVVAEPPVANEDCSLKCCS 816
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 286 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 321
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 287 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 322
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 155 (59.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N DSC C +GG+L+CCD+CP+AFH Q C LS + LP G W C CT
Sbjct: 53 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 101
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL+ W C + V
Sbjct: 283 IQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHV 318
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 153 (58.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 726 ATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
A + +E E+ +N+D C C GEL+ CD CP A+H C+ ++++ P G W C++C
Sbjct: 241 AAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Query: 784 TCWICG-DLVNDKEASSSFDALK----------CSQCEHKYHGECLKD-MSKGAVSEAWF 831
G ++V ++ A + + K C C +H C+ +++ E W
Sbjct: 301 IEH--GPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWS 358
Query: 832 CNQSCQEV 839
C + C+ V
Sbjct: 359 CPR-CETV 365
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 153 (58.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 726 ATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
A + +E E+ +N+D C C GEL+ CD CP A+H C+ ++++ P G W C++C
Sbjct: 241 AAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Query: 784 TCWICG-DLVNDKEASSSFDALK----------CSQCEHKYHGECLKD-MSKGAVSEAWF 831
G ++V ++ A + + K C C +H C+ +++ E W
Sbjct: 301 IEH--GPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWS 358
Query: 832 CNQSCQEV 839
C + C+ V
Sbjct: 359 CPR-CETV 365
>WB|WBGene00018013 [details] [associations]
symbol:phf-10 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00530000063194
OMA:CETSSQD EMBL:FO081281 GeneID:3565141 KEGG:cel:CELE_F33E11.6
UCSC:F33E11.6b CTD:3565141 NextBio:955339 RefSeq:NP_001041113.1
ProteinModelPortal:Q2A950 SMR:Q2A950 STRING:Q2A950
EnsemblMetazoa:F33E11.6b WormBase:F33E11.6b InParanoid:Q2A950
ArrayExpress:Q2A950 Uniprot:Q2A950
Length = 447
Score = 131 (51.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 36/116 (31%), Positives = 51/116 (43%)
Query: 744 CGICGD-GGELICCDNCPSAFHQACLSIQD-----LPTGSWFCSNCT-CWICGDLVNDKE 796
C C GGE+ICC C A+H C+ + + + T W C +C C IC +KE
Sbjct: 335 CDSCEKTGGEMICCATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNK--PEKE 392
Query: 797 ASSSFDALKCSQCEHKYHGEC--LKDMSKGAVSEAWFCNQSCQEVGNKLGQGRVSA 850
F C +C+ +H C LK + +G W C+ C K + R SA
Sbjct: 393 DEIVF----CDRCDRGFHTYCVGLKKLPQGT----WICDTYCAIENMKFNR-RASA 439
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/140 (26%), Positives = 72/140 (51%)
Query: 221 ISQESS-ATRLTVASPSVTVAEKSGFAQCAA-----ETVDRSISVGLDASNISFKLDAKM 274
IS+ES+ ++ T A+P T ++++ +Q A ETV+R++ + LD ++ K+
Sbjct: 6 ISEESNISSSETPATP--TDSQEAASSQPAPISSRRETVNRNVYIMLDVNH------RKV 57
Query: 275 DPRSLLQNHIFNLLTAAGWAVERR-------KRPSRKYMDTIYR--SPEGRLFREFP-KV 324
+P+ +++ + + + + W ++ + K SRKY D R + E R F E+ V
Sbjct: 58 EPKDIIE-YEWPVKSGDRWFLQEQIGELLDIKSFSRKYPDFTRRKVNHEEREFLEWNFNV 116
Query: 325 WRVCGENLLADGSNVVPADD 344
++ E LL D N + A +
Sbjct: 117 HKLLNETLLRD-MNAMRASE 135
>MGI|MGI:2142581 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1
(human)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=ISO] [GO:0032259 "methylation" evidence=IEA] [GO:0034968
"histone lysine methylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00249
SMART:SM00317 SMART:SM00570 MGI:MGI:2142581 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC156990
HOGENOM:HOG000230893 HOVERGEN:HBG079979 CTD:54904 KO:K11425
ChiTaRS:WHSC1L1 EMBL:AK079952 EMBL:AK132725 EMBL:AK156746
EMBL:AK170040 EMBL:AC162367 EMBL:BC064447 IPI:IPI00353681
IPI:IPI00625887 IPI:IPI00974621 IPI:IPI00987793
RefSeq:NP_001001735.1 UniGene:Mm.217337 ProteinModelPortal:Q6P2L6
SMR:Q6P2L6 STRING:Q6P2L6 PhosphoSite:Q6P2L6 PaxDb:Q6P2L6
PRIDE:Q6P2L6 DNASU:234135 Ensembl:ENSMUST00000146919
Ensembl:ENSMUST00000155861 GeneID:234135 KEGG:mmu:234135
UCSC:uc009lgk.1 UCSC:uc009lgm.1 UCSC:uc009lgp.1 InParanoid:Q6P2L6
NextBio:382034 Bgee:Q6P2L6 Genevestigator:Q6P2L6
GermOnline:ENSMUSG00000054823 Uniprot:Q6P2L6
Length = 1439
Score = 148 (57.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 41/123 (33%), Positives = 59/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C A ++ K+ K R V+ + ++D C CGDGGEL+ CD +CP A+
Sbjct: 1290 RPKSACT-SAVDEKTKNAKLKKRR-KVKAEAKPIHEDYCFQCGDGGELVMCDKKDCPKAY 1347
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C CG + + SF C C H + C K K
Sbjct: 1348 HLLCLNLTQPPHGKWECPWHRCDECGSV------AVSF----CEFCPHSF---C-KAHGK 1393
Query: 824 GAV 826
GA+
Sbjct: 1394 GAL 1396
Score = 140 (54.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 658 DAVIKDGLVTNNGIICKCCNLVFSVSQFK-IHAGFKPNRPCLN--LVMESGKPFTLCQLQ 714
DA + G V+ + I C N SQ I+ GF C +V + P +
Sbjct: 830 DACVAAGSVSVSSHILICSNHSKRSSQSAAINVGFC--FVCARGLIVQDHSDP--MFSSY 885
Query: 715 AWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI D+P
Sbjct: 886 AYKSHYLLSES-NRAELMKLPMIPSSSASKKRCEKGGRLLCCESCPASFHPECLSI-DMP 943
Query: 775 TGSWFCSNC 783
G W C++C
Sbjct: 944 EGCWNCNDC 952
Score = 55 (24.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/162 (16%), Positives = 59/162 (36%)
Query: 458 QFDPSVHEVVSSGVTEQSGQSADEGRKCIKASGINAEDDYSAADVXXXXXXXXXXXXISE 517
Q + + + +G+ + + + +D + K S A D A +S+
Sbjct: 603 QVETAPQASLKTGLQKGASEISDSCKPLKKRS--RASTDVETASCTYRDTSDSDSRGLSD 660
Query: 518 MRLTTLSHSDIQSLTLDIK-TEVQDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGS 576
++ D S T D ++ Q D+S + ++K + + + G
Sbjct: 661 GQVGFGKQVDSPSATADADASDAQSVDSSLSRRGVGTSKKDTVCQVCEKAGDCLVACEGE 720
Query: 577 C--HLQIAKRG-SKFEKTHHDCDGSKNGQKRPVTCRIKDDDL 615
C H + G + + H C+ + GQ +C++ D+
Sbjct: 721 CCRHFHVECLGLTAVPEGHFTCEECETGQHPCFSCKVSGKDV 762
Score = 40 (19.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 57 SDILLCSNSDNSSITSQASSKNL 79
S IL+CSN +S +SQ+++ N+
Sbjct: 842 SHILICSN--HSKRSSQSAAINV 862
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 535 IKTEVQDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHL 579
I+T +++ S ++ PK+ K+ V A Q S KT G+ +
Sbjct: 581 IRTR-SESEKSA-EVVPKKKIKKEQVETAPQASLKTGLQKGASEI 623
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
+N+D C +C +GGEL+CCD CP FH +C ++ P G W C+ C
Sbjct: 100 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 146
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 163 (62.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 723 RKSATRAGTVET--DEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSW 778
R T A + T EDD N+D C +C +GGEL+CCD+CP FH C +++ P+G W
Sbjct: 914 RGGTTNANSQTTAGKEDDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDW 973
Query: 779 FCSNC 783
C+ C
Sbjct: 974 MCTFC 978
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 65 SDNSSITSQASSKNLNVEDSHNATENSGGA 94
+DN SS N+ VE S GGA
Sbjct: 2 ADNKGQDCTESSANMEVEASGTEENGDGGA 31
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 267 SFKLDAKMDPRSLLQNHIFNLLTAAGWAV 295
S KL ++ S+L I ++L WA+
Sbjct: 411 SMKLLSQQRDISVLAQQIIHVLNFTNWAI 439
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 14/54 (25%), Positives = 20/54 (37%)
Query: 408 KAARSFIVDKREKSDPILALENVSSFETHCSQRDLPVHFDDATLGTKTCPQFDP 461
+A S + +E +D + E V T S +AT GT DP
Sbjct: 35 EAVVSIDTEPKEAADEAKSQETVPQAPTTSSDSSSSGGGGEATDGTPNAESADP 88
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 162 (62.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CCD+CP+AFH+ CL+I D+P G+W+C++C
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1646
Score = 143 (55.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 35/109 (32%), Positives = 51/109 (46%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAFHQACLSIQDLP 774
S ++K + R E ++ +D C CGD G+L+ C CP +H CL++ P
Sbjct: 1994 SRKFKRKPHGKRRSQGEVTKE--REDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRP 2051
Query: 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
G W C C +CG KEA+S + S C K H E + +SK
Sbjct: 2052 AGKWECPWHQCDVCG-----KEAASFCEMCPSSFC--KQHREGMLFISK 2093
Score = 50 (22.7 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 17/115 (14%), Positives = 49/115 (42%)
Query: 196 IKQSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSVTVAEKSG-FAQCAAETVD 254
+++ + ++ E++L + S +++ L V E+ F + D
Sbjct: 1199 VQEQVHKVSSRCEDESLLARCQPSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSD 1258
Query: 255 RSIS-VGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERRKRPSRKYMDT 308
++ L +S + + PR L++ + T + +R+++P++K +++
Sbjct: 1259 LGVTHAELPQLTLSVPVAPEASPRPALESEELLVKTPGNYESKRQRKPTKKLLES 1313
Score = 45 (20.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 23/85 (27%), Positives = 33/85 (38%)
Query: 51 HDDSKISDILLCSNSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGN 110
++D+ SD+ S + S KNL E S G GS E L G N
Sbjct: 998 NEDTHFSDVHFDSKAKQSD-----PDKNLEKEPSFE--NRKGPELGSEMNTENDELHGVN 1050
Query: 111 DESLNAKRMKFSVDNLTYIKPKSGQ 135
+ + KR + L +PK G+
Sbjct: 1051 -QVVPKKRWQ----RLNQRRPKPGK 1070
Score = 41 (19.5 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 62 CSNSDNSSITSQASSKNLNVEDSHNATENS 91
CS+ D + S + L + D+ + TEN+
Sbjct: 543 CSDLDPTEHNSGFQNSVLGITDAFDKTENA 572
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 334 ADGSNVVPADDGKEWTDINHFHTDLFDTLINMEKVMCKSNLAN 376
A N +P + +++ + D+ D+ +++M NLA+
Sbjct: 789 ASSQNHIPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAQNLAS 831
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 417 KREKSDPILALENVSSFE 434
K ++SDP LE SFE
Sbjct: 1011 KAKQSDPDKNLEKEPSFE 1028
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 151 (58.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQAC----LSIQDLPTGSWFCSNC 783
N D C C +GG L+CCD CPS+FH C LS +D+P+G W C +C
Sbjct: 52 NHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSC 99
Score = 45 (20.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ C C +H +CL + W C
Sbjct: 272 ISCDYCPLYFHQDCLDPPLTALPAGLWMC 300
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/140 (26%), Positives = 62/140 (44%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICG----DGGELICCDN--CPSAF-HQACLS 769
S+E + S V E ++ + C CG GG+ I CD+ CP + H CL+
Sbjct: 328 SNESEENSSCNMNHEVHHVEMSRDSELCRTCGTKVDSGGKYITCDHPFCPHKYYHIRCLT 387
Query: 770 IQDLPTGS--WFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVS 827
+ + W+CS+C C C + DK+ + C C+ YH C++ + +
Sbjct: 388 SRQIKLHGVRWYCSSCLCRNC---LTDKDDDK---IVLCDGCDDAYHIYCMRPPCESVPN 441
Query: 828 EAWFCNQSCQEVGNKLGQGR 847
WFC +C+ K+ + R
Sbjct: 442 GEWFCT-ACKAAILKVQKAR 460
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 151 (58.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFH-QAC---LSIQDLPTGSWFCSNCT 784
N D C C +GG+L+CCD+CP+AFH Q C LS + LP+G W C CT
Sbjct: 55 NHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRCT 103
Score = 44 (20.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
++C C +H +CL + W C Q +
Sbjct: 298 IQCDFCPLLFHMDCLDPPLTAFPTGRWMCPNHIQNL 333
>UNIPROTKB|H0YMU7 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016571 "histone methylation" evidence=IEA] InterPro:IPR001841
InterPro:IPR000637 InterPro:IPR001594 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00354
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0016571 EMBL:AC005631
EMBL:AC006017 EMBL:AC104692 HGNC:HGNC:13726 ChiTaRS:MLL3
EMBL:AC006474 ProteinModelPortal:H0YMU7 SMR:H0YMU7
Ensembl:ENST00000558084 Bgee:H0YMU7 Uniprot:H0YMU7
Length = 826
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 33/117 (28%), Positives = 47/117 (40%)
Query: 733 ETDEDDKNDDSCGICGDGGELI---CCDNCPSAFHQACLSIQDLPT--GSWFCSNCTCWI 787
+ E K D +C +C G+L+ C C +H CL I P W C C +
Sbjct: 333 QAPERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--V 390
Query: 788 CGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQS--CQEVGNK 842
C N K++ L C C+ YH CL+ + K + W C C E G +
Sbjct: 391 CQ---NCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIECGTR 444
>UNIPROTKB|B7ZL11 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AC087362 EMBL:AC087623
HOVERGEN:HBG079979 UniGene:Hs.608111 HGNC:HGNC:12767
ChiTaRS:WHSC1L1 EMBL:BC143510 IPI:IPI00980085 SMR:B7ZL11
STRING:B7ZL11 Ensembl:ENST00000527502 UCSC:uc011lbm.2
Uniprot:B7ZL11
Length = 1426
Score = 159 (61.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C ++ K+ K + ++T+ ++D C CGDGGEL+ CD +CP A+
Sbjct: 1276 RPKSACA-STNEEKAKNAKLKQKRRKIKTEPKQMHEDYCFQCGDGGELVMCDKKDCPKAY 1334
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C C A+ SF C C H + C KD K
Sbjct: 1335 HLLCLNLTQPPYGKWECPWHQCDECSS------AAVSF----CEFCPHSF---C-KDHEK 1380
Query: 824 GAV 826
GA+
Sbjct: 1381 GAL 1383
Score = 132 (51.5 bits), Expect = 0.00019, P = 0.00019
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 658 DAVIKDGLVTNNGIICKCCN-LVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQLQ 714
DA I G + + I C N S + ++ GF C +V + P +
Sbjct: 830 DACIAAGSMLVSSYILICSNHSKRSSNSSAVNVGFC--FVCARGLIVQDHSDP--MFSSY 885
Query: 715 AWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI+ +P
Sbjct: 886 AYKSHYLLNES-NRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIE-MP 943
Query: 775 TGSWFCSNC 783
G W C++C
Sbjct: 944 EGCWNCNDC 952
Score = 38 (18.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 57 SDILLCSNSDNSSITSQA 74
S IL+CSN S S A
Sbjct: 842 SYILICSNHSKRSSNSSA 859
>UNIPROTKB|Q9BZ95 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0016049 "cell growth" evidence=NAS] [GO:0016571 "histone
methylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IC]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0034968 "histone lysine methylation" evidence=IDA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0030154 GO:GO:0006355
EMBL:CH471080 GO:GO:0046872 GO:GO:0016049 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 PDB:4GNE PDB:4GNF PDB:4GNG PDBsum:4GNE PDBsum:4GNF
PDBsum:4GNG PharmGKB:PA37370 HOVERGEN:HBG079979 EMBL:AF332468
EMBL:AF332469 EMBL:AJ295990 EMBL:AJ295991 EMBL:AJ295992
EMBL:AF255649 EMBL:AK000360 EMBL:AK022560 EMBL:AK127594
EMBL:BC012059 EMBL:BC062631 EMBL:BC101717 EMBL:BC107734
EMBL:BC113469 EMBL:BC115006 IPI:IPI00307783 IPI:IPI00444331
IPI:IPI00743157 IPI:IPI00792713 RefSeq:NP_060248.2
RefSeq:NP_075447.1 UniGene:Hs.608111 PDB:2DAQ PDB:4GND PDBsum:2DAQ
PDBsum:4GND ProteinModelPortal:Q9BZ95 SMR:Q9BZ95 IntAct:Q9BZ95
STRING:Q9BZ95 PhosphoSite:Q9BZ95 DMDM:74761342 PaxDb:Q9BZ95
PRIDE:Q9BZ95 DNASU:54904 Ensembl:ENST00000316985
Ensembl:ENST00000317025 Ensembl:ENST00000433384 GeneID:54904
KEGG:hsa:54904 UCSC:uc003xli.3 UCSC:uc003xlj.3 UCSC:uc010lwe.3
CTD:54904 GeneCards:GC08M038151 HGNC:HGNC:12767 HPA:CAB013721
HPA:HPA005659 HPA:HPA018893 MIM:607083 neXtProt:NX_Q9BZ95
InParanoid:Q9BZ95 KO:K11425 OMA:MEKDIHK ChiTaRS:WHSC1L1
EvolutionaryTrace:Q9BZ95 GenomeRNAi:54904 NextBio:57940
ArrayExpress:Q9BZ95 Bgee:Q9BZ95 Genevestigator:Q9BZ95
GermOnline:ENSG00000147548 Uniprot:Q9BZ95
Length = 1437
Score = 159 (61.0 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C ++ K+ K + ++T+ ++D C CGDGGEL+ CD +CP A+
Sbjct: 1287 RPKSACA-STNEEKAKNAKLKQKRRKIKTEPKQMHEDYCFQCGDGGELVMCDKKDCPKAY 1345
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C C A+ SF C C H + C KD K
Sbjct: 1346 HLLCLNLTQPPYGKWECPWHQCDECSS------AAVSF----CEFCPHSF---C-KDHEK 1391
Query: 824 GAV 826
GA+
Sbjct: 1392 GAL 1394
Score = 132 (51.5 bits), Expect = 0.00019, P = 0.00019
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 658 DAVIKDGLVTNNGIICKCCN-LVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQLQ 714
DA I G + + I C N S + ++ GF C +V + P +
Sbjct: 830 DACIAAGSMLVSSYILICSNHSKRSSNSSAVNVGFC--FVCARGLIVQDHSDP--MFSSY 885
Query: 715 AWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI+ +P
Sbjct: 886 AYKSHYLLNES-NRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIE-MP 943
Query: 775 TGSWFCSNC 783
G W C++C
Sbjct: 944 EGCWNCNDC 952
Score = 38 (18.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 57 SDILLCSNSDNSSITSQA 74
S IL+CSN S S A
Sbjct: 842 SYILICSNHSKRSSNSSA 859
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 161 (61.7 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CC++CP+AFH+ CL+I D+P GSW+C++C
Sbjct: 1263 CFVCSEGGSLLCCESCPAAFHRECLNI-DMPEGSWYCNDC 1301
Score = 45 (20.9 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 15/59 (25%), Positives = 22/59 (37%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCN-QSCQEVGNK 842
C+ CGD + K C YH +CL +++K W C C G +
Sbjct: 1669 CFSCGD-------GGQIVSCKRPGCPKVYHADCL-NLTKRPAGR-WECPWHQCDLCGQE 1718
Score = 44 (20.5 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 54 SKISDILLCSNSDNSSITSQASS 76
+K+S LLC D S+ S+ S
Sbjct: 532 AKLSSELLCCKDDEHSVKSEDES 554
Score = 41 (19.5 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 213 LGKAIASPISQESSATRLTVASPSVTVAEKSGFAQC--AAETVDRSI---SVGLDASNIS 267
L +A P+ S L A+PSV + + +C A + D I SV L SNI
Sbjct: 1182 LNRAFRCPLHACLSCFILNPANPSVAKGQLTRCIRCPVAYHSSDFCIPAGSVTLTDSNIV 1241
Query: 268 FKLDAKMDPRSLLQNH 283
PR +NH
Sbjct: 1242 --CPNHFTPRKGCRNH 1255
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 457 PQFDPSVHEV-VSSGVTEQ-SGQSADEGRKCIKASG 490
P + E+ VS V + + +SAD+G ++ SG
Sbjct: 1020 PMLKSTEMEIDVSPAVLQTINTESADDGSDTLRCSG 1055
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 35 GGTSKRCLVTGVINFEHDDSKIS 57
G +RC+V G F H + S
Sbjct: 1153 GEDVRRCMVPGCGKFYHGECAAS 1175
Score = 37 (18.1 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 243 SGFAQCAAETVDRSISVGLDASNISFKLDAKMDPRSLLQNHIFNLLTAAGWAVERR 298
+G ++ ++V+ S G + I A M P+ + +L T A A++RR
Sbjct: 402 NGISRAGIKSVN--CSFGKVSCKIKMPDSASMKPKDNHNTGLEHLSTEAKKALDRR 455
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 154 (59.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC+ CP+AFH CLSI+ +P GSWFC++C
Sbjct: 815 CFVCSKGGSLLCCEACPAAFHPDCLSIE-MPDGSWFCNDC 853
Score = 149 (57.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAF 763
+P T L + ++ K K TR + + +++D C CGDGG+L+ CD C A+
Sbjct: 1186 RPKTSTSLSS-EEKSKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAY 1244
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKC--SQCEHKYHGECLKDM 821
H +CL + P G W C C +CG + S+SF L C S C+ G +
Sbjct: 1245 HLSCLGLGKRPFGKWECPWHHCDVCG------KPSTSFCHL-CPNSFCKEHQDGTAFRST 1297
Query: 822 SKG 824
G
Sbjct: 1298 QDG 1300
Score = 42 (19.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 407 VKAARSFIVDKREKSDPILALENVSSFETHCSQRDL 442
++ R I DK ++ A+E SS ++ + ++L
Sbjct: 536 LRKQRETITDKTARTSSYKAIEAASSLKSQAATKNL 571
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 68 SSITSQASSKNLN 80
SS+ SQA++KNL+
Sbjct: 560 SSLKSQAATKNLS 572
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 154 (59.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC+ CP+AFH CLSI+ +P GSWFC++C
Sbjct: 835 CFVCSKGGSLLCCEACPAAFHPDCLSIE-MPDGSWFCNDC 873
Score = 149 (57.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAF 763
+P T L + ++ K K TR + + +++D C CGDGG+L+ CD C A+
Sbjct: 1206 RPKTSTSLSS-EEKSKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAY 1264
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKC--SQCEHKYHGECLKDM 821
H +CL + P G W C C +CG + S+SF L C S C+ G +
Sbjct: 1265 HLSCLGLGKRPFGKWECPWHHCDVCG------KPSTSFCHL-CPNSFCKEHQDGTAFRST 1317
Query: 822 SKG 824
G
Sbjct: 1318 QDG 1320
Score = 42 (19.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 407 VKAARSFIVDKREKSDPILALENVSSFETHCSQRDL 442
++ R I DK ++ A+E SS ++ + ++L
Sbjct: 556 LRKQRETITDKTARTSSYKAIEAASSLKSQAATKNL 591
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 68 SSITSQASSKNLN 80
SS+ SQA++KNL+
Sbjct: 580 SSLKSQAATKNLS 592
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + D+D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 43 KKKKKPGLLNSSSKDQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 102
Query: 781 SNC 783
C
Sbjct: 103 PEC 105
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 809 CEHKYHGECLKDMSKGAVSEAWFCN-QSCQEVGNKLGQGRVS 849
C+ + E +K ++ A + + ++ QE GNK QG S
Sbjct: 984 CQQAHWPEHMKSCTQSATAPQQEADAEANQETGNKTSQGSSS 1025
Score = 40 (19.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 102 CPECEKITVAECIETQSK 119
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 154 (59.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC++CP+AFH CL+I+ +P GSWFC++C
Sbjct: 834 CFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDC 872
Score = 144 (55.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAF 763
+P T L + ++ K K TR + + +++D C CGDGG+L+ CD C A+
Sbjct: 1205 RPKTSTTLSS-EEKGKKTKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAY 1263
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICG 789
H +CL + P G W C C +CG
Sbjct: 1264 HLSCLGLGKRPFGKWECPWHHCDVCG 1289
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 597 GSKNGQKRPVTCRIKD 612
G+ NG+KR T RI+D
Sbjct: 519 GNVNGKKRNHTKRIQD 534
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 411 RSFIVDKREKSDPILALENVSSFETHCSQRDL 442
R I DK ++ A+E SS ++ + ++L
Sbjct: 559 RDTITDKTARTSSYKAMEAASSLKSQAATKNL 590
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 68 SSITSQASSKNLN 80
SS+ SQA++KNL+
Sbjct: 579 SSLKSQAATKNLS 591
>TAIR|locus:2080863 [details] [associations]
symbol:AT3G51120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016570 "histone
modification" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=RCA] InterPro:IPR000571 InterPro:IPR001965
InterPro:IPR003121 InterPro:IPR003169 InterPro:IPR004343
InterPro:IPR018144 InterPro:IPR019787 Pfam:PF00642 Pfam:PF02201
Pfam:PF02213 Pfam:PF03126 PROSITE:PS50016 PROSITE:PS50103
PROSITE:PS50829 PROSITE:PS51360 SMART:SM00249 SMART:SM00719
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006352 GO:GO:0016570
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:NOG12793 InterPro:IPR019786 PROSITE:PS01359
SUPFAM:SSF55277 SUPFAM:SSF47592 EMBL:AL132980 IPI:IPI00542687
PIR:T45743 RefSeq:NP_190681.6 UniGene:At.858 HSSP:O43918
ProteinModelPortal:Q9SD34 SMR:Q9SD34 PaxDb:Q9SD34 PRIDE:Q9SD34
EnsemblPlants:AT3G51120.1 GeneID:824276 KEGG:ath:AT3G51120
TAIR:At3g51120 HOGENOM:HOG000177620 InParanoid:Q9SD34 OMA:ESEIWHY
Genevestigator:Q9SD34 Uniprot:Q9SD34
Length = 1292
Score = 143 (55.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/90 (37%), Positives = 45/90 (50%)
Query: 736 EDDKNDDSCGICGDGGELICCD--NCPSAFHQACLSIQDL---PTGSWFCSNCTCWICGD 790
++DK +D C IC DGG+L+ CD NCP A+H AC+ + T W NC ICG
Sbjct: 105 KEDKEEDVCFICFDGGDLVLCDRRNCPKAYHPACIKRDEAFFRTTAKW---NCGWHICGT 161
Query: 791 LVNDKEASSSFDALKCSQCEHKYHGECLKD 820
++ASS C C C+KD
Sbjct: 162 C---QKASSYM----CYTCTFSVCKRCIKD 184
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 142 (55.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 43 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 102
Query: 781 SNC 783
C
Sbjct: 103 PEC 105
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACL----SIQDLPTGSWFCSNCT 784
+N D C CG G ICC+ CP +FH +CL + +++P GSWFC C+
Sbjct: 115 RNVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCS 164
>UNIPROTKB|E1BNH7 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:DAAA02060851 EMBL:DAAA02060847
EMBL:DAAA02060848 EMBL:DAAA02060849 EMBL:DAAA02060850
IPI:IPI00924282 Ensembl:ENSBTAT00000061245 Uniprot:E1BNH7
Length = 1440
Score = 143 (55.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C A ++ K+ K + ++T+ ++D C CGDGGEL+ CD +C A+
Sbjct: 1290 RPKSACASTA-EEKAKNAKLKPKRRKIKTEPKQLHEDFCFQCGDGGELVMCDRKDCSKAY 1348
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C C A+ +F C C + C KD K
Sbjct: 1349 HLLCLNLPQPPYGKWECPWHQCDECS------AAAVAF----CEFCPRSF---C-KDHEK 1394
Query: 824 GAV 826
GA+
Sbjct: 1395 GAL 1397
Score = 135 (52.6 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 658 DAVIKDG--LVTNNGIICKCCNLVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQL 713
DA I G LV++ +IC + S S ++ GF C +V + P +
Sbjct: 831 DACIAAGSTLVSSCVLICSNHSTRSSGSSSAVNVGFC--FVCARGLIVQDHSDP--MFSS 886
Query: 714 QAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDL 773
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI+
Sbjct: 887 YAYKSHYLLNES-NRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIET- 944
Query: 774 PTGSWFCSNC 783
P G W C++C
Sbjct: 945 PEGCWNCNDC 954
>FB|FBgn0023097 [details] [associations]
symbol:bon "bonus" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0048666
"neuron development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0005634 GO:GO:0007411
GO:GO:0046872 GO:GO:0008270 GO:GO:0007422 GO:GO:0003682
GO:GO:0048813 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006325 Gene3D:1.20.920.10 SUPFAM:SSF47370
HSSP:Q9UIG0 FlyBase:FBgn0023097 EMBL:AF210315
ProteinModelPortal:Q9U3Y7 SMR:Q9U3Y7 STRING:Q9U3Y7 PRIDE:Q9U3Y7
InParanoid:Q9U3Y7 OrthoDB:EOG48KPS6 ArrayExpress:Q9U3Y7 Bgee:Q9U3Y7
Uniprot:Q9U3Y7
Length = 1133
Score = 149 (57.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLP--TGSWFCSNC 783
+DD N+D C +C DGGEL+CCD CP FHQ C +I LP + SW C C
Sbjct: 892 KDDPNEDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDESESWQCLLC 943
Score = 42 (19.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 689 AGFKPNRPCLNLVMESGKP 707
AG PN P +N ++G P
Sbjct: 487 AGLSPNGPPVNFGPQNGPP 505
Score = 37 (18.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 18/80 (22%), Positives = 31/80 (38%)
Query: 54 SKISDILLCSNSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDES 113
S+ +L +N +S + S K+ N + GG G + + SS N +
Sbjct: 740 SQQGPLLPFANGRQTSENFKISLKSPNTLKNSTPPSLGGGGAGHQGHGNGSSSAQLNAAA 799
Query: 114 LNAKRMKFSVDNLTYIKPKS 133
L + N+T PK+
Sbjct: 800 LGLGPAVSILSNVTSTIPKT 819
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 135 (52.6 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTCWICGD 790
E +E +NDD C CG G ICC+ CP +FH C I++ P W+C C + +
Sbjct: 262 EEEEVKENDDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEAPEDEWYCRECYTKVHPE 321
Query: 791 LVND 794
+ D
Sbjct: 322 SIQD 325
Score = 48 (22.0 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 552 KEAQ-KQFLVNAAVQGSQKTPSSLGSCHLQIAKRGSKFEKTHHDCDGSKNGQKRPVTCRI 610
KE++ +Q L+N K + L + K ++ DGS N ++RP+ +I
Sbjct: 169 KESELRQSLLNEKTSSKPKRTTRLKLTLRTPTQETGKQQQQKRSLDGSANAKQRPLK-KI 227
Query: 611 K 611
K
Sbjct: 228 K 228
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 804 LKCSQCEHKYHGECLKDMSKG--AVSEAWFCNQSCQEV 839
+ C C YH +CL G + + W C +++
Sbjct: 426 IHCDYCPLVYHIDCLDPPLFGPKTIGDKWRCPNHIEDL 463
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 714 QAWSDEYKSRKSATRAGTVETDEDDK 739
Q+ DE KS++ + R +E + K
Sbjct: 39 QSTGDEVKSKRKSARIAQLEAESIPK 64
>MGI|MGI:1276574 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003149 "membranous septum morphogenesis" evidence=IMP]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IMP]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=IDA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IEA] [GO:0034968 "histone lysine
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060348 "bone development" evidence=IMP]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 MGI:MGI:1276574 Pfam:PF00855 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0031965 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 KO:K11424
UniGene:Mm.332320 HSSP:Q9BYU8 CTD:7468 OMA:DVKRCVV ChiTaRS:WHSC1
EMBL:EU733655 EMBL:AK129287 EMBL:AC163329 EMBL:AK078622
EMBL:BC046473 EMBL:BC053454 IPI:IPI00107975 IPI:IPI00671804
IPI:IPI00762411 IPI:IPI00902751 RefSeq:NP_001074571.2
RefSeq:NP_780440.2 UniGene:Mm.19892 UniGene:Mm.490310
ProteinModelPortal:Q8BVE8 SMR:Q8BVE8 STRING:Q8BVE8
PhosphoSite:Q8BVE8 PaxDb:Q8BVE8 PRIDE:Q8BVE8
Ensembl:ENSMUST00000058096 Ensembl:ENSMUST00000066854
Ensembl:ENSMUST00000075812 GeneID:107823 KEGG:mmu:107823
UCSC:uc008xbm.2 UCSC:uc012duw.1 HOGENOM:HOG000230893
HOVERGEN:HBG079979 NextBio:359529 Bgee:Q8BVE8 CleanEx:MM_WHSC1
Genevestigator:Q8BVE8 GermOnline:ENSMUSG00000057406 Uniprot:Q8BVE8
Length = 1365
Score = 151 (58.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC+ CP+AFH CL+I+ +P GSWFC++C
Sbjct: 834 CFVCSKGGSLLCCEACPAAFHPDCLNIE-MPDGSWFCNDC 872
Score = 149 (57.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDN--CPSAF 763
+P T L + ++ K K TR + + +++D C CGDGG+L+ CD C A+
Sbjct: 1205 RPKTSASLSS-EEKGKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAY 1263
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKC--SQCEHKYHGECLKDM 821
H +CL + P G W C C +CG + S+SF L C S C+ G +
Sbjct: 1264 HLSCLGLGKRPFGKWECPWHHCDVCG------KPSTSFCHL-CPNSFCKEHQDGTAFRST 1316
Query: 822 SKG 824
G
Sbjct: 1317 QDG 1319
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 411 RSFIVDKREKSDPILALENVSSFETHCSQRDL 442
R I DK ++ A+E SS ++ + ++L
Sbjct: 559 RETITDKTARTSSYKAIEAASSLKSQAATKNL 590
Score = 40 (19.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 68 SSITSQASSKNLN 80
SS+ SQA++KNL+
Sbjct: 579 SSLKSQAATKNLS 591
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 141 (54.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSW 778
+S +++ RA + ++ + ++C +C GEL+ CD C A+H AC+ +++ P G W
Sbjct: 245 ESARASKRARKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDW 304
Query: 779 FCSNCTCWICGDLVNDKE-ASSSFD----------ALKCSQCEHKYHGECLKDMSKGAVS 827
C +C L+ ++E A ++ D L C C YH C+ D +
Sbjct: 305 SCPHCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCI-DPPLTEIP 363
Query: 828 EA-WFC 832
E W C
Sbjct: 364 EGEWSC 369
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 141 (54.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSW 778
+S +++ RA + ++ + ++C +C GEL+ CD C A+H AC+ +++ P G W
Sbjct: 245 ESARASKRARKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDW 304
Query: 779 FCSNCTCWICGDLVNDKE-ASSSFD----------ALKCSQCEHKYHGECLKDMSKGAVS 827
C +C L+ ++E A ++ D L C C YH C+ D +
Sbjct: 305 SCPHCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCI-DPPLTEIP 363
Query: 828 EA-WFC 832
E W C
Sbjct: 364 EGEWSC 369
>UNIPROTKB|F1MYZ3 [details] [associations]
symbol:Bt.18271 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042800 "histone methyltransferase activity (H3-K4
specific)" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00109 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0051568
GeneTree:ENSGT00690000101661 OMA:VDPYERP EMBL:DAAA02012048
EMBL:DAAA02012049 IPI:IPI00688241 Ensembl:ENSBTAT00000028347
Uniprot:F1MYZ3
Length = 4824
Score = 145 (56.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/117 (28%), Positives = 47/117 (40%)
Query: 733 ETDEDDKNDDSCGICGDGGELI---CCDNCPSAFHQACLSIQDLPT--GSWFCSNCTCWI 787
+ E K D +C +C G+L+ C C +H CL I P W C C +
Sbjct: 249 QAPERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--V 306
Query: 788 CGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQS--CQEVGNK 842
C N K++ L C C+ YH CL+ + K + W C C E G +
Sbjct: 307 CQ---NCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICVECGTR 360
>WB|WBGene00008081 [details] [associations]
symbol:athp-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 150 (57.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQ--DLP 774
S+E +R S + VE + CGIC GG ++CC+ CP++FH AC+ + DLP
Sbjct: 35 SEELSARGSGKKKKQVEEEWKWPEAQICGICSSGGNILCCEQCPASFHLACIGYESSDLP 94
Query: 775 TGSWFCSNC 783
+++C+ C
Sbjct: 95 DDNFYCNRC 103
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 804 LKCSQCEHKYHGECL 818
LKC C+ +H +C+
Sbjct: 234 LKCDFCDLIWHQKCV 248
>UNIPROTKB|Q18605 [details] [associations]
symbol:athp-1 "Protein ATHP-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 150 (57.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 717 SDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQ--DLP 774
S+E +R S + VE + CGIC GG ++CC+ CP++FH AC+ + DLP
Sbjct: 35 SEELSARGSGKKKKQVEEEWKWPEAQICGICSSGGNILCCEQCPASFHLACIGYESSDLP 94
Query: 775 TGSWFCSNC 783
+++C+ C
Sbjct: 95 DDNFYCNRC 103
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 804 LKCSQCEHKYHGECL 818
LKC C+ +H +C+
Sbjct: 234 LKCDFCDLIWHQKCV 248
>UNIPROTKB|F1RZJ3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:CU570721 Ensembl:ENSSSCT00000017228
Uniprot:F1RZJ3
Length = 1437
Score = 153 (58.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C ++ K+ K + V+T+ ++D C CGDGGEL+ CD +CP A+
Sbjct: 1287 RPKSACA-STTEEKAKNAKLKQKRRKVKTEPKQLHEDYCFQCGDGGELVMCDRKDCPKAY 1345
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C C A+ SF C C + C KD K
Sbjct: 1346 HLLCLNLPQPPYGKWECPWHQCDECSS------AAVSF----CEFCPRSF---C-KDHDK 1391
Query: 824 GAV 826
GA+
Sbjct: 1392 GAL 1394
Score = 133 (51.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 658 DAVIKDGLVTNNGIICKCCNLV--FSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQL 713
DA I G + + I C N S S ++ GF C +V + P +
Sbjct: 829 DACIAAGSIFVSSCILICSNHSKRSSNSSSAVNVGFC--FVCARGLIVQDHSDP--MFSS 884
Query: 714 QAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDL 773
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI+ +
Sbjct: 885 YAYKSHYLLNES-NRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIE-M 942
Query: 774 PTGSWFCSNC 783
P G W C++C
Sbjct: 943 PEGCWNCNDC 952
Score = 38 (18.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 57 SDILLCSN-SDNSSITSQA 74
S IL+CSN S SS +S A
Sbjct: 841 SCILICSNHSKRSSNSSSA 859
>MGI|MGI:2444959 [details] [associations]
symbol:Mll3 "myeloid/lymphoid or mixed-lineage leukemia 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051568 "histone
H3-K4 methylation" evidence=ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 MGI:MGI:2444959 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 HOVERGEN:HBG045586 ChiTaRS:MLL3 EMBL:AY138582
EMBL:AC116469 EMBL:AC127319 EMBL:AC134910 EMBL:AK044828
EMBL:AK054270 EMBL:AK077567 EMBL:AY036886 EMBL:AY036887
IPI:IPI00620674 IPI:IPI00623069 UniGene:Mm.332268
ProteinModelPortal:Q8BRH4 SMR:Q8BRH4 IntAct:Q8BRH4 STRING:Q8BRH4
PhosphoSite:Q8BRH4 PaxDb:Q8BRH4 PRIDE:Q8BRH4 UCSC:uc008wsv.1
HOGENOM:HOG000113602 InParanoid:Q8BRH4 OrthoDB:EOG4THVS4
Bgee:Q8BRH4 CleanEx:MM_MLL3 Genevestigator:Q8BRH4
GermOnline:ENSMUSG00000038056 Uniprot:Q8BRH4
Length = 4903
Score = 144 (55.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/117 (28%), Positives = 47/117 (40%)
Query: 733 ETDEDDKNDDSCGICGDGGELI---CCDNCPSAFHQACLSIQDLPT--GSWFCSNCTCWI 787
+ E K D +C +C G+L+ C C +H CL I P W C C +
Sbjct: 332 QAPERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--V 389
Query: 788 CGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQS--CQEVGNK 842
C N K++ L C C+ YH CL+ + K + W C C E G +
Sbjct: 390 CQ---NCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIECGTR 443
>UNIPROTKB|Q8NEZ4 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051568 "histone
H3-K4 methylation" evidence=IDA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 EMBL:AC005631 EMBL:AC006017 EMBL:AY024361
EMBL:AF264750 EMBL:AC104692 EMBL:AB040939 EMBL:AK022687
EMBL:AK075113 EMBL:AL833924 IPI:IPI00168806 IPI:IPI00375729
IPI:IPI00916332 RefSeq:NP_733751.2 UniGene:Hs.647120 PDB:2YSM
PDB:2YUK PDB:3UVL PDB:4ERY PDBsum:2YSM PDBsum:2YUK PDBsum:3UVL
PDBsum:4ERY ProteinModelPortal:Q8NEZ4 SMR:Q8NEZ4 DIP:DIP-48649N
IntAct:Q8NEZ4 STRING:Q8NEZ4 PhosphoSite:Q8NEZ4 DMDM:221222521
PaxDb:Q8NEZ4 PRIDE:Q8NEZ4 Ensembl:ENST00000262189
Ensembl:ENST00000355193 GeneID:58508 KEGG:hsa:58508 UCSC:uc003wky.3
UCSC:uc003wla.3 CTD:58508 GeneCards:GC07M151832 H-InvDB:HIX0007238
H-InvDB:HIX0016202 H-InvDB:HIX0080234 HGNC:HGNC:13726 MIM:606833
neXtProt:NX_Q8NEZ4 PharmGKB:PA30847 HOVERGEN:HBG045586
InParanoid:Q8NEZ4 KO:K09188 OMA:VDPYERP PhylomeDB:Q8NEZ4
ChiTaRS:MLL3 EvolutionaryTrace:Q8NEZ4 GenomeRNAi:58508
NextBio:65023 ArrayExpress:Q8NEZ4 Bgee:Q8NEZ4 CleanEx:HS_MLL3
Genevestigator:Q8NEZ4 GermOnline:ENSG00000055609 Uniprot:Q8NEZ4
Length = 4911
Score = 144 (55.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/117 (28%), Positives = 47/117 (40%)
Query: 733 ETDEDDKNDDSCGICGDGGELI---CCDNCPSAFHQACLSIQDLPT--GSWFCSNCTCWI 787
+ E K D +C +C G+L+ C C +H CL I P W C C +
Sbjct: 333 QAPERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--V 390
Query: 788 CGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQS--CQEVGNK 842
C N K++ L C C+ YH CL+ + K + W C C E G +
Sbjct: 391 CQ---NCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIECGTR 444
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 734 TDEDDKNDDSCGICGDGGE-----LICCDNCPSAFHQACLSIQDLP---TGSWFCSNCT- 784
+D+ N D C +CG G+ L+ C C +H C+SI+ + W C CT
Sbjct: 106 SDKFTLNQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLECTV 165
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQS--CQEVG 840
C CG +A+ L C C+ YH CL + W C C+ G
Sbjct: 166 CEACG------KATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCG 217
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 157 (60.3 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 744 CGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C GG L+CC++CP+AFH CLSI+ +P GSWFC++C
Sbjct: 837 CFVCSKGGSLLCCESCPAAFHPDCLSIE-MPDGSWFCNDC 875
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 411 RSFIVDKREKSDPILALENVSSFETHCSQRDL 442
R I DK ++ ALE SS ++ + + L
Sbjct: 562 RETITDKTARTTSCKALEAASSLKSQAATKHL 593
Score = 38 (18.4 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 21/95 (22%), Positives = 35/95 (36%)
Query: 396 RKIGSLRKGDVVKAARSFIVDKREKSD-PILALENVSSFETHCSQRDLPVHFDDATLGTK 454
R G L G+ S V K KSD + F R P+ ++ G +
Sbjct: 703 RPEGRLLCGECTSGIHSCFVCKESKSDVKRCVVSQCGKFYHEACVRRFPLTVFESR-GFR 761
Query: 455 TCPQFDPSVHEVVSSGVTEQSGQSADEGR--KCIK 487
CP +H +S + S +G+ +C++
Sbjct: 762 -CP-----LHSCLSCHASNPSNPRPSKGKMLRCVR 790
Score = 37 (18.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 74 ASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDESLNAKRMKFSVDNL 126
A + VE A E SG + P+ S EG + ++ S +NL
Sbjct: 363 AKEAGVAVESLGEAAEPSGVEEEAADSPKSSGEEGAPVKRRRRAKLSSSTENL 415
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 143 (55.4 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
+N+D C +C +GGEL+CCD+CP FH +C ++ P G W C+ C
Sbjct: 781 ENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLC 827
Score = 47 (21.6 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 64 NSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPE--RSSLEGGNDESLNAKRMKF 121
N+ NS TS + NL V +H G CGS C+ R++ E G + ++
Sbjct: 612 NTPNS--TSYSGCSNLFVP-AHPKNIIGLGTCGSACWNTGIRTAFEMGLKFNSKSQASSR 668
Query: 122 SVDNLTYIKPKSGQV 136
+ + SG +
Sbjct: 669 KISTTMSLNSNSGAI 683
Score = 40 (19.1 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 43 VTGVINFEHDDSKISDILLCSN 64
+ G E + SD+LLC N
Sbjct: 373 IIGGFTMEGGHTSHSDVLLCGN 394
>ZFIN|ZDB-GENE-060503-376 [details] [associations]
symbol:mll4a "myeloid/lymphoid or mixed-lineage
leukemia 4a" species:7955 "Danio rerio" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR002857
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR015722
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02008 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51058
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 ZFIN:ZDB-GENE-060503-376 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00690000101661 PANTHER:PTHR22884:SF10 EMBL:CR391915
EMBL:CR854888 IPI:IPI01016939 Ensembl:ENSDART00000091588
ArrayExpress:F1QFF8 Bgee:F1QFF8 Uniprot:F1QFF8
Length = 2863
Score = 119 (46.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/98 (28%), Positives = 42/98 (42%)
Query: 744 CGICGDGG--ELICCDNCPSAFHQACLSIQDLPTG----SWFCSNCT-CWICGDLVNDKE 796
C +C G E++ C C FH CL D P +W C C C +CG ++
Sbjct: 1017 CLLCASKGQHEMVYCQMCCEPFHHFCLPPDDRPKEENKENWCCRRCKFCHVCG-----RK 1071
Query: 797 ASSSFDALKCSQCEHKYHGECLKDMSKGAV--SEAWFC 832
+ + L+C +C + YH CL V + +W C
Sbjct: 1072 SKQTKPVLQCKRCMYCYHPSCLGPTYPKPVKMNTSWVC 1109
Score = 76 (31.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 64 NSDNSSITS--QASSK-NLNVEDSHNATENSGGACGSRCYPERSSLEGGNDESLNA-KRM 119
+SD + + S +ASSK N+ ++ ++TE S P+R S+ G N ++ KR
Sbjct: 587 HSDQTPLASLAEASSKENVETDNLEDSTETSAQNEQQGGIPQRMSVSGANRRMIHLLKRA 646
Query: 120 KFSVDNLTYIKPKSGQVLTSTDILKGTVAGTSCPST 155
+ + IK + L S +L GTV P+T
Sbjct: 647 RVQL-----IKIDQQKQLKSAQLLSGTVKAREGPAT 677
>UNIPROTKB|C9J929 [details] [associations]
symbol:PHF15 "Protein Jade-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
HOGENOM:HOG000220882 HGNC:HGNC:22984 ChiTaRS:PHF15
OrthoDB:EOG41NTKC EMBL:AC005355 EMBL:AC106763 IPI:IPI00879315
ProteinModelPortal:C9J929 SMR:C9J929 STRING:C9J929
Ensembl:ENST00000431355 ArrayExpress:C9J929 Bgee:C9J929
Uniprot:C9J929
Length = 255
Score = 127 (49.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 712 QLQAWSDEYKSRKSATRAGT-VETDEDDKNDDSCGIC----G-DGGELICCDNCPSAFHQ 765
+L+ + +R T+ G +E DED C +C G DG E++ CD C HQ
Sbjct: 173 ELETLCHQNMARAIETQEGLGIEYDEDVV----CDVCRSPEGEDGNEMVFCDKCNVCVHQ 228
Query: 766 ACLSIQDLPTGSWFCSNC 783
AC I +PTGSW C C
Sbjct: 229 ACYGILKVPTGSWLCRTC 246
Score = 39 (18.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 289 TAAGWAVERRKRPSRKY 305
T +GW + K+PS +
Sbjct: 37 TKSGWPRQNEKKPSEVF 53
>UNIPROTKB|D4A3R4 [details] [associations]
symbol:Whsc1l1 "Protein Whsc1l1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00393216 Ensembl:ENSRNOT00000031675
ArrayExpress:D4A3R4 Uniprot:D4A3R4
Length = 1439
Score = 150 (57.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 41/123 (33%), Positives = 56/123 (45%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C A ++ R G E + ++D C CGDGGEL+ CD +CP A+
Sbjct: 1290 RPKSACTSAADEKTKNAKLKKRRRGKAEAKQI--HEDYCFQCGDGGELVMCDKKDCPKAY 1347
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C CG A+ SF C C H + C K K
Sbjct: 1348 HLLCLNLTQPPYGKWECPWHQCDECGS------AAISF----CEFCPHSF---C-KAHEK 1393
Query: 824 GAV 826
GA+
Sbjct: 1394 GAL 1396
Score = 136 (52.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 40/129 (31%), Positives = 60/129 (46%)
Query: 658 DAVIKDGLVTNNGIICKCCN-LVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQLQ 714
DA + G V+ + I C N S I+ GF C +V + P +
Sbjct: 830 DACVAAGSVSVSSHILICSNHSKRSSHSAAINVGFC--FVCARGLIVQDHSDP--MFSSY 885
Query: 715 AWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI D+P
Sbjct: 886 AYKSHYLLSES-NRAELMKLPMIPSSSASKKRCEKGGRLLCCESCPASFHPECLSI-DMP 943
Query: 775 TGSWFCSNC 783
G W C++C
Sbjct: 944 EGCWNCNDC 952
Score = 37 (18.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 57 SDILLCSNSDNSSITSQA 74
S IL+CSN S S A
Sbjct: 842 SHILICSNHSKRSSHSAA 859
>RGD|1308980 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016571 "histone methylation" evidence=ISO]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA;ISO] [GO:0034968 "histone lysine methylation"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00204321 Ensembl:ENSRNOT00000021053
UCSC:RGD:1308980 ArrayExpress:D4AC06 Uniprot:D4AC06
Length = 1443
Score = 150 (57.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 41/123 (33%), Positives = 56/123 (45%)
Query: 706 KPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAF 763
+P + C A ++ R G E + ++D C CGDGGEL+ CD +CP A+
Sbjct: 1294 RPKSACTSAADEKTKNAKLKKRRRGKAEAKQI--HEDYCFQCGDGGELVMCDKKDCPKAY 1351
Query: 764 HQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK 823
H CL++ P G W C C CG A+ SF C C H + C K K
Sbjct: 1352 HLLCLNLTQPPYGKWECPWHQCDECGS------AAISF----CEFCPHSF---C-KAHEK 1397
Query: 824 GAV 826
GA+
Sbjct: 1398 GAL 1400
Score = 136 (52.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 40/129 (31%), Positives = 60/129 (46%)
Query: 658 DAVIKDGLVTNNGIICKCCN-LVFSVSQFKIHAGFKPNRPCLN--LVMESGKPFTLCQLQ 714
DA + G V+ + I C N S I+ GF C +V + P +
Sbjct: 837 DACVAAGSVSVSSHILICSNHSKRSSHSAAINVGFC--FVCARGLIVQDHSDP--MFSSY 892
Query: 715 AWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLP 774
A+ Y +S RA ++ + S C GG L+CC++CP++FH CLSI D+P
Sbjct: 893 AYKSHYLLSES-NRAELMKLPMIPSSSASKKRCEKGGRLLCCESCPASFHPECLSI-DMP 950
Query: 775 TGSWFCSNC 783
G W C++C
Sbjct: 951 EGCWNCNDC 959
Score = 37 (18.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 57 SDILLCSNSDNSSITSQA 74
S IL+CSN S S A
Sbjct: 849 SHILICSNHSKRSSHSAA 866
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 142 (55.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 43 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 102
Query: 781 SNC 783
C
Sbjct: 103 PEC 105
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 102 CPECEKITVAECIETQSK 119
>ZFIN|ZDB-GENE-041014-190 [details] [associations]
symbol:dpf3 "D4, zinc and double PHD fingers,
family 3" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA;ISS] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
ZFIN:ZDB-GENE-041014-190 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016514
GO:GO:0055008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0042393
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:8110
EMBL:EU245032 EMBL:BX255881 IPI:IPI00488271 RefSeq:NP_001104639.1
UniGene:Dr.81131 ProteinModelPortal:A9LMC0 STRING:A9LMC0
Ensembl:ENSDART00000123387 GeneID:562738 KEGG:dre:562738
InParanoid:Q5RIJ2 OMA:AEVEPRS OrthoDB:EOG49KFR1 NextBio:20884558
Bgee:A9LMC0 Uniprot:A9LMC0
Length = 391
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/115 (30%), Positives = 48/115 (41%)
Query: 741 DDSCGIC-GDGG---------ELICCDNCPSAFHQACLSIQD-----LPTGSWFCSNC-T 784
+D C C GD G EL+ C +C + H +CL D + T W C C +
Sbjct: 273 NDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKS 332
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEV 839
C +CG ND + L C C+ YH CLK +W C+ CQ +
Sbjct: 333 CSLCGTSENDDQL------LFCDDCDRGYHMYCLKPPMTQPPEGSWSCHL-CQNL 380
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 25/71 (35%), Positives = 35/71 (49%)
Query: 737 DDKNDDSCGICGDGGELICCDNCPSAFHQACLSI----QDLPTGSWFCSNCT--CWICGD 790
D +N+D C C G +CCD CP +FH CL +LP G W C+ C +I
Sbjct: 256 DFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECKFKIFINNS 315
Query: 791 LVNDKEASSSF 801
+ K+ S+F
Sbjct: 316 MATLKKIESNF 326
Score = 45 (20.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 804 LKCSQCEHKYHGECLKDMSKGAVSEAWFC 832
+ C C+ +H +C+ S + W C
Sbjct: 438 MTCDYCQTPWHLDCVPRASFKNLGSKWKC 466
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 193 MDVIKQSLPRLDGHDGKEAILGKAIASPISQESSATRLTVASPSVTVAEKSGFAQCAAET 252
MD K+ R H + +++S S+E + ++S +V K +E
Sbjct: 1 MDTSKKDTTRSPSHSNSSSPSSSSLSSSSSKEKKRPK-RLSSQNVNYDLKRRKI-ITSEG 58
Query: 253 VDRSISVGLDASNISFKLDA-KMDPRSLLQ 281
++RS + SN++ + + + +P+ LL+
Sbjct: 59 IERSFKN--EHSNLAVEDNIPEEEPKELLE 86
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 142 (55.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 63 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 122
Query: 781 SNC 783
C
Sbjct: 123 PEC 125
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 122 CPECEKITVAECIETQSK 139
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 145 (56.1 bits), Expect = 0.00016, Sum P(2) = 0.00015
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 744 CGICG-DGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
C +C +GG L+CC++CP+AFH CL+I+ +P GSW+C++C
Sbjct: 839 CFVCSKEGGSLLCCESCPAAFHPDCLNIE-MPDGSWYCNDC 878
Score = 139 (54.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 715 AWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCD--NCPSAFHQACLSIQD 772
A ++ K K TR + + +++D C CGDGG+L+ CD +C A+H +CL +
Sbjct: 1219 ASEEKGKKTKKRTRRRRTKNEGKKESEDDCFRCGDGGQLVLCDRKSCTKAYHLSCLDLAK 1278
Query: 773 LP--TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAW 830
P G W C C +CG + S SF C C + + C K+ G V +
Sbjct: 1279 RPFVIGKWECPWHHCDVCG------KPSVSF----CHFCPNSF---C-KEHQDGTVLNST 1324
Query: 831 FCNQSC 836
Q C
Sbjct: 1325 LNGQLC 1330
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00015
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 63 SNSDNSSITSQASSKNLNVEDSHNATENSGG 93
S +D++ +SQ +KN + S E+ G
Sbjct: 409 SATDDTQESSQLETKNTTPQKSSEQAESKRG 439
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 63 SNSDNSSITSQASSKNLNVEDSHNATENSGGAC 95
SN + S ++ + + + +AT+N AC
Sbjct: 567 SNDKTAKTNSTKVTETSSSQKNQSATKNLSDAC 599
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 137 (53.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 80 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 127
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 809 CEHKYHGECLKDMSKGAVSEAWFCN-QSCQEVGNKLGQGRVS 849
C+ + E +K ++ A + + ++ QE GNK QG S
Sbjct: 1057 CQQAHWPEHMKSCTQSATAPQQEADAEANQETGNKTSQGSSS 1098
Score = 40 (19.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 124 CPECEKITVAECIETQSK 141
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 142 (55.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 63 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 122
Query: 781 SNC 783
C
Sbjct: 123 PEC 125
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 122 CPECEKITVAECIETQSK 139
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 142 (55.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 63 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 122
Query: 781 SNC 783
C
Sbjct: 123 PEC 125
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 122 CPECEKITVAECIETQSK 139
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 133 (51.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 722 SRKSATRAGTVETD--EDDKNDDSCGICGDGGELICCDNCPSAFHQACLS--IQDLPTGS 777
++K G + D E D + D C +C GGE+I CD CP A+H CL ++ P G
Sbjct: 363 AKKKKKALGDEDGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGK 421
Query: 778 WFCSNC 783
W C +C
Sbjct: 422 WSCPHC 427
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/51 (17%), Positives = 20/51 (39%)
Query: 62 CSNSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGNDE 112
C + +++ S+ + ED + EN+ S P ++ D+
Sbjct: 8 CEEDEGTAVNSEGGDFDEEEEDDGDLDENASDI-NSPAAPRETAARAAPDD 57
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/62 (22%), Positives = 22/62 (35%)
Query: 541 DADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGSCHLQIAKRGSKFEKTHHDCDGSKN 600
D D + + A ++ AA + +L KRG K +K D K
Sbjct: 32 DLDENASDINSPAAPRETAARAAPDDGDDIGEASDRDNLGKKKRGPKKKKETKKKDKEKE 91
Query: 601 GQ 602
G+
Sbjct: 92 GK 93
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 142 (55.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K + ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 68 KKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 127
Query: 781 SNC 783
C
Sbjct: 128 PEC 130
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 127 CPECEKITVAECIETQSK 144
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 151 (58.2 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 29/79 (36%), Positives = 38/79 (48%)
Query: 709 TLCQLQAWSDEYKSRKSATRAGTVETDED-DKNDDSCGICGDGGELICCDNCPSAFHQAC 767
+L + WS Y T G D D N D C +CG G L+CCD CP A+H C
Sbjct: 386 SLSDSKNWSSRY------TDGGPNGDSPDLDANSDECRLCGMDGTLLCCDGCPLAYHSRC 439
Query: 768 LSIQDL--PTGSWFCSNCT 784
+ + + P G W+C CT
Sbjct: 440 IGVVKMYIPDGPWYCPECT 458
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLK 819
CWIC N + C+ C+ YH E +K
Sbjct: 1245 CWICKLPYNP-----GLTYIHCTSCDMWYHIEAVK 1274
Score = 44 (20.5 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 802 DALKCSQCEHKYHGEC 817
D++ CS C+ H EC
Sbjct: 1096 DSITCSTCQGFCHKEC 1111
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 639 IIAGIIALNDVIQYRNPK-DDAVIKDG------LVTNNGIICKCCNLVFSVSQFKIHAGF 691
+I G +D ++ R K DD ++K + N G+ CN SV++ + +G+
Sbjct: 90 LIIGDSYFDDELRARRSKLDDFILKKDEKKKTDCLKNKGVEVPTCNSPSSVAE--VESGY 147
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 44 TGVINFEHDDSKISDILLC 62
TG+ E++D D+ C
Sbjct: 67 TGLYRVEYEDGDFEDLETC 85
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 231 TVASPSVTVAE-KSGFAQC 248
T SPS +VAE +SG++ C
Sbjct: 133 TCNSPS-SVAEVESGYSSC 150
>ZFIN|ZDB-GENE-050417-474 [details] [associations]
symbol:zgc:113411 "zgc:113411" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
PROSITE:PS50016 PROSITE:PS50864 SMART:SM00249 SMART:SM00258
ZFIN:ZDB-GENE-050417-474 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 EMBL:BC093591 IPI:IPI00570096
UniGene:Dr.31417 ProteinModelPortal:Q566E8 HOVERGEN:HBG099637
InParanoid:Q566E8 Uniprot:Q566E8
Length = 408
Score = 129 (50.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 740 NDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNCTCWICGDLVNDKEA 797
NDD C +C G L+CCD CP AFH C ++ + +G W C C L N K +
Sbjct: 249 NDDVCFVCNSEGNLVCCDECPRAFHHHCHLPAVPEDSSGKWSCIICV------LKNMKGS 302
Query: 798 S--SSFDALKCSQCEHKYHGECL 818
S + D + ++ H +CL
Sbjct: 303 SQKNQQDIMSSPVSQYTQHCQCL 325
Score = 41 (19.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 567 SQKTPSSLGSCHLQIAKRGSKFEKTHHDCDGSKNGQKR-PVTCRIKD 612
S K + S + +KR K + +C S + Q R PVTC K+
Sbjct: 5 SCKKSRQIRSSSICSSKR--KKQAKSKNCLQSSSSQSRLPVTCGYKE 49
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/83 (31%), Positives = 32/83 (38%)
Query: 568 QKTPSSLGSCHLQIAKR--GSKFEKTHHDCDGSK-NGQKRPVTCRIKDDDLLGGELIKNG 624
+K P L L+ A++ GS+ E D D +K G PV C L G
Sbjct: 124 KKRPEVLQQQVLESAEKSNGSQGEDDD-DIDMTKFEGATLPVACGSNSGVLHKCRFA--G 180
Query: 625 MWFMEGTRTVLSWLIIAGIIALN 647
RT SWL G I LN
Sbjct: 181 ERCGRCIRTENSWLTPEGFIKLN 203
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 139 (54.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
+N+D C +C +GGEL+CCD CP FH +C ++ P G W C+ C
Sbjct: 1126 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLC 1172
Score = 44 (20.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 70 ITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGN 110
+ S + + E + + + SGGA GS C + + GN
Sbjct: 884 LQSMPPASDTQPETASSGSPGSGGAVGSLCPGDGADPSLGN 924
Score = 40 (19.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 350 DIN-HFHTDLFDT-LINMEKVM--CKSNLANELACQWC 383
D+N HF F T M + CK A + C +C
Sbjct: 120 DVNEHFFLQCFSTGRSKMARNCSECKEKRAAHILCTYC 157
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 141 (54.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 711 CQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSI 770
C+L+ Y + + T +D +ND C +C G+++CC+ CP +H CL +
Sbjct: 78 CELRHGPFYYVKQPALTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKL 137
Query: 771 QDLPTGSWFCSNC 783
P G WFC C
Sbjct: 138 AAEPEGDWFCPEC 150
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 147 CPECEKITVAECIETQSK 164
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 141 (54.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFC 780
K +K ++D +ND C +C G+++CC+ CP +H CL + P G WFC
Sbjct: 63 KKKKKPGLLNNNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFC 122
Query: 781 SNC 783
C
Sbjct: 123 PEC 125
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 122 CPECEKITVAECIETQSK 139
>WB|WBGene00008902 [details] [associations]
symbol:phf-32 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:Z68114 HSSP:Q14839 eggNOG:NOG145066
GeneTree:ENSGT00530000069671 PIR:T21042 RefSeq:NP_510057.1
UniGene:Cel.26461 ProteinModelPortal:Q19511 SMR:Q19511
EnsemblMetazoa:F17A2.3 GeneID:184600 KEGG:cel:CELE_F17A2.3
UCSC:F17A2.3 CTD:184600 WormBase:F17A2.3 NextBio:925334
Uniprot:Q19511
Length = 463
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 721 KSRKSATRAGTVETDEDD---KNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPT-- 775
K R + + T E D+ + + CG+C DGG +I C+ CP++FH CL ++ +P
Sbjct: 4 KMRGECSSSATSEPDDQNWLWPEQNKCGMCADGGTIIWCETCPASFHAFCLGLKTIPEPE 63
Query: 776 -GSWFCSNC 783
++ C C
Sbjct: 64 KDTFICHRC 72
>UNIPROTKB|G4MUP6 [details] [associations]
symbol:MGG_10196 "Bromodomain containing 1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:CM001232 InterPro:IPR019542
Pfam:PF10513 KO:K11380 RefSeq:XP_003713826.1
ProteinModelPortal:G4MUP6 EnsemblFungi:MGG_10196T0 GeneID:2681768
KEGG:mgr:MGG_10196 Uniprot:G4MUP6
Length = 1217
Score = 130 (50.8 bits), Expect = 0.00026, P = 0.00026
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 720 YKSRKSATRAGTVETDEDDKNDDSCGICGDG-----GELICCDNCPSAFHQACLSIQDLP 774
++ R S+ A ET ++ D C IC DG ++ CD C A HQ C + +P
Sbjct: 417 HRPRSSSAAAVNGETQAGEEQDSKCAICDDGDCENTNAIVFCDGCDLAVHQECYGVPFIP 476
Query: 775 TGSWFCSNC 783
G W C C
Sbjct: 477 EGQWLCRKC 485
>WB|WBGene00001470 [details] [associations]
symbol:flt-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:FO080623
RefSeq:NP_498673.3 ProteinModelPortal:Q23590 SMR:Q23590
PaxDb:Q23590 EnsemblMetazoa:ZK783.4 GeneID:176078
KEGG:cel:CELE_ZK783.4 UCSC:ZK783.4 CTD:176078 WormBase:ZK783.4
HOGENOM:HOG000015886 NextBio:891018 Uniprot:Q23590
Length = 1390
Score = 143 (55.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/109 (30%), Positives = 50/109 (45%)
Query: 736 EDDKNDDSCGICG--DGGELICCDNCPSAFHQACLS--IQDLPTGSWFCSNCTCWICGDL 791
E + C IC DG E++ CD C S H C + +P G WFC C G
Sbjct: 1095 ERSSREALCQICKSMDGDEMLVCDGCESGCHMECFRPRMTKVPEGDWFCQRCREEKSGRP 1154
Query: 792 VNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVS-EAWFCNQSCQEV 839
+ + + + +C +C + H EC +D K A++ E + C CQE+
Sbjct: 1155 MCMFCSRETGNLHQCQRCAYHVHQECSQDGPKEAINPETFICGH-CQEM 1202
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 540 QDADASGVQLEPKEAQKQFLVNAAVQGSQKTPSSLGS 576
Q A+ + + KE +KQ AA + K +S S
Sbjct: 95 QQEKAAADKAKEKEKEKQKAAAAAAAAAAKASASTSS 131
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 130 (50.8 bits), Expect = 0.00029, P = 0.00029
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 721 KSRKSATRAGTVETDEDDKNDDSCGICG--DGGELIC-CDNCPSAFHQACLS--IQDLPT 775
+ R+S+ + T +++D NDD C CG + ELI CD+C S +H ACL + +P
Sbjct: 834 RERRSSD-SSTSSSEDDTPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPD 892
Query: 776 GSWFCSNC 783
G WFC C
Sbjct: 893 GEWFCPPC 900
>RGD|1306330 [details] [associations]
symbol:Ing1 "inhibitor of growth family, member 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010941 "regulation of cell death" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1306330 GO:GO:0005634 GO:GO:0045893 GO:GO:0010941
GO:GO:0046872 GO:GO:0008270 GO:GO:0006606 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:BC086336 IPI:IPI00365368
UniGene:Rn.145491 UniGene:Rn.232052 ProteinModelPortal:Q5RK29
STRING:Q5RK29 UCSC:RGD:1306330 InParanoid:Q5RK29
ArrayExpress:Q5RK29 Genevestigator:Q5RK29 Uniprot:Q5RK29
Length = 102
Score = 101 (40.6 bits), Expect = 0.00031, P = 0.00031
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 721 KSRKSATRAGTVETDED---DKNDDSCGICGDG--GELICCDN--CPSA-FHQACLSIQD 772
K ++S +A + D D N+ + +C GE+I CDN CP FH +C+ +
Sbjct: 9 KKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNH 68
Query: 773 LPTGSWFCSNC 783
P G W+C C
Sbjct: 69 KPKGKWYCPKC 79
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 138 (53.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 733 ETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
E + +N+D C +C GG+L+CCD CP FH +C + P G W C+ C
Sbjct: 895 EESPEIENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLC 947
Score = 41 (19.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/88 (21%), Positives = 34/88 (38%)
Query: 16 EGSRDEHQIFSEVFFRNDPGGTSKRCLVTGVINFEHDDSKISDILLCSNSD-NSSITSQA 74
E S+ Q F + +D SK ++ H D SD++ SD + T +A
Sbjct: 754 EDSQPPVQEFCNINQESDALSVSKDAVLQPDAEEIHSDDSPSDLISAPGSDFQTESTREA 813
Query: 75 SSKNLNVEDSHNATENSGGACGSRCYPE 102
++ ++S E+ + PE
Sbjct: 814 DVESELPQESELQVESESDVISEQL-PE 840
>WB|WBGene00011729 [details] [associations]
symbol:set-16 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0006479 "protein methylation"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0040028
"regulation of vulval development" evidence=IGI] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR015722 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0005634
GO:GO:0009792 GO:GO:0006898 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 GO:GO:0046872
GO:GO:0008270 GO:GO:0010171 GO:GO:0040017 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0040027
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GeneTree:ENSGT00690000101661 PANTHER:PTHR22884:SF10 EMBL:Z81120
EMBL:Z82094 RefSeq:NP_499819.3 ProteinModelPortal:G5EGI1 SMR:G5EGI1
EnsemblMetazoa:T12D8.1 GeneID:176802 KEGG:cel:CELE_T12D8.1
CTD:176802 WormBase:T12D8.1 OMA:QLEDAYP Uniprot:G5EGI1
Length = 2475
Score = 132 (51.5 bits), Expect = 0.00035, P = 0.00035
Identities = 32/113 (28%), Positives = 47/113 (41%)
Query: 744 CGICGDG--GELICCDNCPSAFHQACLSIQDLPTGS-----WFCSNCT-CWICGDLVNDK 795
CG G G G ++ C NC +H C+++ D + W C +CT C CG
Sbjct: 431 CGSIGKGPEGSMVACSNCAQTYHTYCVTLHDKLNSAVVGRGWRCLDCTVCEGCG--TGGD 488
Query: 796 EASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCN--QSCQEVGNKLGQG 846
EA+ L C +C+ YH C+K + W C C+ +K G
Sbjct: 489 EAN----LLLCDECDVSYHIYCMKPLLDKIPQGPWRCQWCSRCRRCNHKAASG 537
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 140 (54.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
+N+D C +C +GGEL+CCD CP FH +C ++ P G W C+ C
Sbjct: 968 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1014
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 91 SGGACGSRCYPERSSLEG 108
S C S C P SL+G
Sbjct: 317 SSSVCCSHCSPVSPSLKG 334
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 140 (54.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 739 KNDDSCGICGDGGELICCDNCPSAFHQACL--SIQDLPTGSWFCSNC 783
+N+D C +C +GGEL+CCD CP FH +C ++ P G W C+ C
Sbjct: 997 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1043
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 91 SGGACGSRCYPERSSLEG 108
S C S C P SL+G
Sbjct: 315 SSSVCCSHCSPVSPSLKG 332
>FB|FBgn0038546 [details] [associations]
symbol:CG7379 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0070822 "Sin3-type
complex" evidence=IDA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0070822 InterPro:IPR024610 Pfam:PF12998
GeneTree:ENSGT00550000074538 EMBL:AY069030 RefSeq:NP_650656.1
UniGene:Dm.2326 SMR:Q9VEF5 IntAct:Q9VEF5 MINT:MINT-314942
STRING:Q9VEF5 EnsemblMetazoa:FBtr0083529 GeneID:42140
KEGG:dme:Dmel_CG7379 UCSC:CG7379-RA FlyBase:FBgn0038546
InParanoid:Q9VEF5 OMA:PNCRGER OrthoDB:EOG4866VB GenomeRNAi:42140
NextBio:827372 Uniprot:Q9VEF5
Length = 433
Score = 111 (44.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 725 SATRAGTVETDEDDKNDDSCGICGD--GGELICCDN--CPSA-FHQACLSIQDLPTGSWF 779
++TR T + D ++ + +C GE+I CDN CP FH +C+S+ P G WF
Sbjct: 341 ASTREETPPPETIDPDEPTYCVCNQISFGEMILCDNDLCPIEWFHFSCVSLVLKPKGKWF 400
Query: 780 CSNC 783
C NC
Sbjct: 401 CPNC 404
Score = 57 (25.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 63 SNSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEGGN 110
S N S+ + SS + +S++A E SG GS +SSL G +
Sbjct: 233 SRRRNESVVNNGSSLEMGGNESNSANEASGSGGGSG--ERKSSLGGAS 278
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 137 (53.3 bits), Expect = 0.00051, Sum P(2) = 0.00050
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 10 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 57
Score = 40 (19.1 bits), Expect = 0.00051, Sum P(2) = 0.00050
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 54 CPECEKITVAECIETQSK 71
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 141 (54.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 712 QLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACL--S 769
++++ S+E++ A A T +N+D C +C +GGEL+CCD CP +H +C +
Sbjct: 968 EVESTSEEHRLIPRAPGAKK-NTPAPIENEDFCAVCINGGELLCCDRCPKVYHLSCHVPA 1026
Query: 770 IQDLPTGSWFCSNC 783
+ P G W C+ C
Sbjct: 1027 LLSFPGGEWVCTLC 1040
Score = 37 (18.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 64 NSDNSSITSQASSKNLNVEDSHNATENSGGACGSRCYPERSSLEG 108
NSD +I+S+ + +E +SG + P+++S +G
Sbjct: 874 NSDIRAISSEPKIPYVRLERLKICAASSGEMPVFKLKPQKNSQDG 918
>RGD|1306355 [details] [associations]
symbol:Sp140 "SP140 nuclear body protein" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 RGD:1306355 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 OrthoDB:EOG44QT09 eggNOG:NOG300534
HOGENOM:HOG000089984 CTD:11262 HOVERGEN:HBG006294
GeneTree:ENSGT00510000046835 EMBL:BC081971 IPI:IPI00471815
RefSeq:NP_001012133.1 UniGene:Rn.27561 SMR:Q66H87
Ensembl:ENSRNOT00000034603 GeneID:316580 KEGG:rno:316580
UCSC:RGD:1306355 InParanoid:Q66H87 NextBio:671042
Genevestigator:Q66H87 Uniprot:Q66H87
Length = 721
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 23/65 (35%), Positives = 27/65 (41%)
Query: 720 YKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQAC-LSIQDLPTGSW 778
Y RK D N D C +C DGG L CCD C AFH+ C + + W
Sbjct: 524 YGKRKKKRTQSLHHFPADPDNSDECEVCRDGGTLFCCDTCSRAFHEECHIPAVEAEVTPW 583
Query: 779 FCSNC 783
C C
Sbjct: 584 SCIFC 588
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 137 (53.3 bits), Expect = 0.00061, Sum P(2) = 0.00060
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 83 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 130
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(2) = 0.00060
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 127 CPECEKITVAECIETQSK 144
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 137 (53.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 103 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 150
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 147 CPECEKITVAECIETQSK 164
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 137 (53.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 720 YKSRKSATRAGTVET-DEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSW 778
Y ++ A V+ +D +ND C +C G+++CC+ CP +H CL + P G W
Sbjct: 87 YYVKQPALTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDW 146
Query: 779 FCSNC 783
FC C
Sbjct: 147 FCPEC 151
Score = 40 (19.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 148 CPECEKITVAECIETQSK 165
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 137 (53.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 110 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 157
Score = 40 (19.1 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 154 CPECEKITVAECIETQSK 171
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 136 (52.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 123 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPEC 170
Score = 40 (19.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 167 CPECEKITVAECIETQSK 184
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 136 (52.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNC 783
+D +ND C +C G+++CC+ CP +H CL + P G WFC C
Sbjct: 101 QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPEC 148
Score = 40 (19.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 806 CSQCEHKYHGECLKDMSK 823
C +CE EC++ SK
Sbjct: 145 CPECEKITVAECIETQSK 162
>UNIPROTKB|H0Y5C4 [details] [associations]
symbol:MLLT10 "Protein AF-10" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AL161799
EMBL:AL358780 EMBL:AL359697 EMBL:AL357372 HGNC:HGNC:16063
ChiTaRS:MLLT10 ProteinModelPortal:H0Y5C4 Ensembl:ENST00000430455
Uniprot:H0Y5C4
Length = 62
Score = 97 (39.2 bits), Expect = 0.00083, P = 0.00083
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 753 LICCDN--CPSAFHQACLSIQDLPTGSWFCSNC 783
L+ CD C A HQAC I +PTG WFC C
Sbjct: 5 LVYCDGHGCSVAVHQACYGIVQVPTGPWFCRKC 37
>UNIPROTKB|F6XUE7 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:MCFSEEV
GeneTree:ENSGT00510000046835 Ensembl:ENSCAFT00000017034
EMBL:AAEX03014424 Uniprot:F6XUE7
Length = 551
Score = 121 (47.7 bits), Expect = 0.00087, P = 0.00087
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 720 YKSRKSATRA-GTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQDLPT--G 776
++ RK+ +A D N D C C DGGEL CCD C +FH+ C I + T
Sbjct: 353 FRKRKTIPKAHNNTLVDPYLGNSDECETCRDGGELFCCDTCSRSFHEDC-HIPPVETERS 411
Query: 777 SWFCSNC 783
W C+ C
Sbjct: 412 PWSCTFC 418
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 855 843 0.00081 122 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 179
No. of states in DFA: 628 (67 KB)
Total size of DFA: 446 KB (2210 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 78.53u 0.09s 78.62t Elapsed: 00:00:04
Total cpu time: 78.55u 0.09s 78.64t Elapsed: 00:00:04
Start: Tue May 21 18:20:52 2013 End: Tue May 21 18:20:56 2013
WARNINGS ISSUED: 1