Query 003031
Match_columns 855
No_of_seqs 267 out of 1529
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 10:47:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.8 2.5E-19 8.5E-24 163.3 6.6 95 737-838 3-103 (111)
2 2kwj_A Zinc finger protein DPF 99.7 1E-18 3.4E-23 161.1 3.6 94 742-842 2-111 (114)
3 4gne_A Histone-lysine N-methyl 99.7 8.2E-18 2.8E-22 155.0 6.9 89 735-833 9-99 (107)
4 3v43_A Histone acetyltransfera 99.7 1.4E-17 4.9E-22 152.9 3.9 92 740-837 4-110 (112)
5 3ask_A E3 ubiquitin-protein li 99.2 4E-12 1.4E-16 130.4 5.1 112 692-836 110-222 (226)
6 1mm2_A MI2-beta; PHD, zinc fin 99.1 4.2E-11 1.4E-15 99.8 4.5 50 736-785 4-55 (61)
7 2lbm_A Transcriptional regulat 99.1 1.3E-11 4.5E-16 118.9 1.1 49 737-785 59-116 (142)
8 1fp0_A KAP-1 corepressor; PHD 99.1 6.9E-11 2.4E-15 105.9 4.9 51 735-785 19-71 (88)
9 1xwh_A Autoimmune regulator; P 99.0 7.9E-11 2.7E-15 99.3 3.5 48 738-785 5-54 (66)
10 2lri_C Autoimmune regulator; Z 99.0 9.9E-11 3.4E-15 99.4 3.9 47 738-784 9-57 (66)
11 2yql_A PHD finger protein 21A; 99.0 1.1E-10 3.8E-15 95.4 3.6 48 737-784 5-54 (56)
12 2l5u_A Chromodomain-helicase-D 99.0 1.1E-10 3.8E-15 97.2 3.6 48 737-784 7-56 (61)
13 2puy_A PHD finger protein 21A; 99.0 1.1E-10 3.7E-15 96.5 3.4 48 738-785 2-51 (60)
14 3u5n_A E3 ubiquitin-protein li 99.0 1.2E-10 4.2E-15 116.5 3.9 49 736-784 2-52 (207)
15 3o36_A Transcription intermedi 99.0 1.7E-10 5.8E-15 113.3 4.1 46 739-784 2-49 (184)
16 2l43_A N-teminal domain from h 99.0 2.7E-10 9.1E-15 101.5 3.7 50 737-786 21-75 (88)
17 2ku3_A Bromodomain-containing 98.9 2E-10 6.9E-15 98.8 2.3 48 738-785 13-65 (71)
18 3asl_A E3 ubiquitin-protein li 98.9 5.4E-10 1.8E-14 95.7 3.9 55 775-836 11-66 (70)
19 3shb_A E3 ubiquitin-protein li 98.9 4.5E-10 1.5E-14 98.1 3.1 56 775-837 19-75 (77)
20 2e6r_A Jumonji/ARID domain-con 98.9 1.3E-09 4.3E-14 97.7 4.3 56 736-791 11-71 (92)
21 2e6s_A E3 ubiquitin-protein li 98.8 1.2E-09 4.2E-14 95.2 3.9 54 776-836 20-74 (77)
22 2yt5_A Metal-response element- 98.8 2E-09 6.7E-14 90.0 3.1 48 738-785 3-60 (66)
23 2ro1_A Transcription intermedi 98.8 2.2E-09 7.6E-14 106.7 3.9 46 741-786 2-49 (189)
24 1f62_A Transcription factor WS 98.7 3.1E-09 1.1E-13 84.8 2.9 42 743-784 2-48 (51)
25 1wev_A Riken cDNA 1110020M19; 98.7 3.2E-09 1.1E-13 94.4 2.4 49 738-786 13-72 (88)
26 2e6s_A E3 ubiquitin-protein li 98.6 2.6E-08 8.8E-13 87.0 3.9 45 740-784 25-75 (77)
27 3ql9_A Transcriptional regulat 98.6 9.9E-09 3.4E-13 97.6 0.8 50 736-785 52-110 (129)
28 1wen_A Inhibitor of growth fam 98.5 7.1E-08 2.4E-12 83.0 5.3 46 738-784 13-63 (71)
29 3asl_A E3 ubiquitin-protein li 98.5 3.6E-08 1.2E-12 84.4 3.4 42 743-784 20-67 (70)
30 2e6r_A Jumonji/ARID domain-con 98.5 4.9E-08 1.7E-12 87.5 2.5 57 775-838 8-65 (92)
31 3c6w_A P28ING5, inhibitor of g 98.4 5.3E-08 1.8E-12 80.9 2.3 44 740-784 8-56 (59)
32 2vnf_A ING 4, P29ING4, inhibit 98.4 5.4E-08 1.8E-12 81.0 2.3 44 740-784 9-57 (60)
33 2g6q_A Inhibitor of growth pro 98.4 5.7E-08 2E-12 81.5 2.3 44 740-784 10-58 (62)
34 1weu_A Inhibitor of growth fam 98.4 1.5E-07 5E-12 84.8 4.9 45 739-784 34-83 (91)
35 1f62_A Transcription factor WS 98.4 1E-07 3.5E-12 76.1 2.6 46 785-837 3-48 (51)
36 2lri_C Autoimmune regulator; Z 98.4 9.8E-08 3.4E-12 81.1 2.6 46 782-837 12-57 (66)
37 2k16_A Transcription initiatio 98.4 1.1E-07 3.8E-12 81.3 2.6 49 737-785 14-67 (75)
38 3v43_A Histone acetyltransfera 98.3 2.3E-07 7.9E-12 85.2 3.8 43 742-784 62-110 (112)
39 3ask_A E3 ubiquitin-protein li 98.3 2.1E-07 7.2E-12 95.7 3.5 44 741-784 174-223 (226)
40 3shb_A E3 ubiquitin-protein li 98.3 2.6E-07 8.9E-12 80.8 3.4 42 743-784 28-75 (77)
41 2puy_A PHD finger protein 21A; 98.3 2.6E-07 9.1E-12 76.3 3.1 46 785-840 8-53 (60)
42 2yql_A PHD finger protein 21A; 98.3 1.8E-07 6E-12 76.5 1.6 43 785-837 12-54 (56)
43 2jmi_A Protein YNG1, ING1 homo 98.3 3.4E-07 1.1E-11 82.4 3.1 46 738-784 23-74 (90)
44 2l5u_A Chromodomain-helicase-D 98.3 3E-07 1E-11 76.6 2.5 44 785-838 14-57 (61)
45 1mm2_A MI2-beta; PHD, zinc fin 98.3 3.3E-07 1.1E-11 76.3 2.7 43 785-837 12-54 (61)
46 2kwj_A Zinc finger protein DPF 98.3 2.8E-07 9.7E-12 84.9 2.6 43 742-784 59-106 (114)
47 1xwh_A Autoimmune regulator; P 98.3 2.8E-07 9.4E-12 77.7 2.2 43 785-837 11-53 (66)
48 1fp0_A KAP-1 corepressor; PHD 98.2 8.1E-07 2.8E-11 79.7 4.9 53 775-837 17-70 (88)
49 2ysm_A Myeloid/lymphoid or mix 98.2 4.8E-07 1.7E-11 82.4 3.4 43 742-784 55-102 (111)
50 1wev_A Riken cDNA 1110020M19; 98.2 7.1E-07 2.4E-11 79.3 3.0 55 784-843 18-76 (88)
51 2yt5_A Metal-response element- 98.0 1E-06 3.6E-11 73.5 1.1 49 784-837 8-59 (66)
52 2lv9_A Histone-lysine N-methyl 98.0 4.8E-06 1.6E-10 75.3 4.4 41 743-784 32-74 (98)
53 2ku3_A Bromodomain-containing 98.0 2.2E-06 7.7E-11 73.7 2.1 48 784-838 18-65 (71)
54 3o36_A Transcription intermedi 97.9 2.5E-06 8.4E-11 83.8 2.4 44 785-838 7-50 (184)
55 3u5n_A E3 ubiquitin-protein li 97.9 2.1E-06 7.2E-11 85.9 1.9 44 785-838 10-53 (207)
56 2k16_A Transcription initiatio 97.9 3.9E-06 1.3E-10 71.7 3.1 47 785-838 21-67 (75)
57 2ro1_A Transcription intermedi 97.9 3.7E-06 1.3E-10 83.7 2.4 44 784-837 4-47 (189)
58 2l43_A N-teminal domain from h 97.9 2.9E-06 1E-10 75.5 1.4 47 785-838 28-74 (88)
59 1x4i_A Inhibitor of growth pro 97.8 6.5E-06 2.2E-10 70.6 2.3 45 741-786 6-55 (70)
60 4bbq_A Lysine-specific demethy 97.6 9.9E-06 3.4E-10 74.0 0.8 85 742-835 8-111 (117)
61 1we9_A PHD finger family prote 97.6 3.3E-05 1.1E-09 64.1 3.0 46 739-784 4-56 (64)
62 2ri7_A Nucleosome-remodeling f 97.5 1E-05 3.4E-10 78.5 -0.8 45 739-784 6-57 (174)
63 1wem_A Death associated transc 97.4 3E-05 1E-09 66.6 1.3 47 737-784 12-68 (76)
64 2lbm_A Transcriptional regulat 97.3 3.4E-05 1.2E-09 74.5 0.5 41 785-834 66-113 (142)
65 1wew_A DNA-binding family prot 97.3 0.0001 3.6E-09 63.8 3.4 44 740-784 15-70 (78)
66 2xb1_A Pygopus homolog 2, B-ce 97.3 4.7E-05 1.6E-09 69.7 1.2 44 742-785 4-60 (105)
67 2lv9_A Histone-lysine N-methyl 97.3 9.5E-05 3.3E-09 66.8 3.2 35 801-837 40-74 (98)
68 2jmi_A Protein YNG1, ING1 homo 97.3 9.3E-05 3.2E-09 66.6 2.3 39 801-841 37-78 (90)
69 2vpb_A Hpygo1, pygopus homolog 97.2 5.6E-05 1.9E-09 64.0 0.3 46 739-784 6-64 (65)
70 3o70_A PHD finger protein 13; 97.2 0.00017 5.8E-09 61.5 3.2 45 739-784 17-65 (68)
71 4gne_A Histone-lysine N-methyl 97.2 0.00013 4.3E-09 67.5 2.1 32 801-834 25-58 (107)
72 1wee_A PHD finger family prote 97.1 0.00026 9E-09 60.3 3.7 45 739-784 14-64 (72)
73 1wil_A KIAA1045 protein; ring 97.1 0.00019 6.5E-09 64.3 2.6 47 738-784 12-74 (89)
74 2vnf_A ING 4, P29ING4, inhibit 97.0 0.00016 5.6E-09 60.1 0.7 34 801-837 21-57 (60)
75 1wen_A Inhibitor of growth fam 96.9 0.00034 1.2E-08 60.1 2.6 34 801-837 27-63 (71)
76 3c6w_A P28ING5, inhibitor of g 96.9 0.00022 7.5E-09 59.2 0.7 34 801-837 20-56 (59)
77 1wep_A PHF8; structural genomi 96.9 0.00019 6.5E-09 62.2 0.4 43 741-784 12-61 (79)
78 2rsd_A E3 SUMO-protein ligase 96.8 0.00063 2.2E-08 57.5 3.1 42 742-784 11-63 (68)
79 2xb1_A Pygopus homolog 2, B-ce 96.8 0.00025 8.4E-09 65.0 0.6 53 782-840 3-62 (105)
80 2kgg_A Histone demethylase jar 96.8 0.00027 9.1E-09 57.0 0.7 42 743-784 4-52 (52)
81 2vpb_A Hpygo1, pygopus homolog 96.8 0.00018 6.2E-09 60.9 -0.4 49 783-837 9-64 (65)
82 2kgg_A Histone demethylase jar 96.8 0.00017 5.9E-09 58.1 -0.6 49 782-836 2-51 (52)
83 1weu_A Inhibitor of growth fam 96.8 0.00058 2E-08 61.6 2.7 34 801-837 47-83 (91)
84 1we9_A PHD finger family prote 96.7 0.00041 1.4E-08 57.5 1.5 48 785-838 9-57 (64)
85 1wee_A PHD finger family prote 96.6 0.00072 2.5E-08 57.6 2.3 46 787-838 20-65 (72)
86 3o70_A PHD finger protein 13; 96.6 0.00064 2.2E-08 57.9 1.8 43 787-837 23-65 (68)
87 2g6q_A Inhibitor of growth pro 96.6 0.00045 1.5E-08 57.9 0.9 34 801-837 22-58 (62)
88 3ql9_A Transcriptional regulat 96.5 0.00017 5.8E-09 68.8 -2.9 42 785-835 60-108 (129)
89 3kqi_A GRC5, PHD finger protei 96.4 0.001 3.5E-08 57.1 1.6 39 746-784 14-59 (75)
90 2ri7_A Nucleosome-remodeling f 96.3 0.00045 1.5E-08 66.9 -1.0 39 801-840 21-60 (174)
91 3o7a_A PHD finger protein 13 v 96.2 0.0019 6.4E-08 52.0 2.0 35 750-784 15-50 (52)
92 3o7a_A PHD finger protein 13 v 96.1 0.0014 4.9E-08 52.6 1.2 36 800-837 15-50 (52)
93 1wew_A DNA-binding family prot 96.0 0.0024 8.2E-08 55.3 2.1 45 787-838 20-71 (78)
94 1wem_A Death associated transc 95.9 0.00097 3.3E-08 57.2 -0.9 46 787-839 20-70 (76)
95 1wep_A PHF8; structural genomi 95.7 0.0019 6.3E-08 56.0 0.2 47 787-839 16-63 (79)
96 3kv5_D JMJC domain-containing 95.7 0.0017 6E-08 73.1 0.0 43 741-784 37-86 (488)
97 1x4i_A Inhibitor of growth pro 95.7 0.0042 1.4E-07 53.2 2.2 39 801-842 17-58 (70)
98 1wil_A KIAA1045 protein; ring 95.6 0.0033 1.1E-07 56.4 1.4 51 785-843 18-80 (89)
99 3kqi_A GRC5, PHD finger protei 95.6 0.003 1E-07 54.3 0.9 40 800-840 22-62 (75)
100 1d9n_A Methyl-CPG-binding prot 95.5 0.013 4.6E-07 51.2 4.7 51 291-341 13-66 (75)
101 3lqh_A Histone-lysine N-methyl 95.1 0.0041 1.4E-07 62.1 0.4 44 742-785 3-62 (183)
102 2rsd_A E3 SUMO-protein ligase 95.1 0.0084 2.9E-07 50.7 2.2 45 787-838 14-64 (68)
103 2ky8_A Methyl-CPG-binding doma 94.9 0.016 5.6E-07 50.2 3.5 51 291-341 15-68 (72)
104 3pur_A Lysine-specific demethy 94.8 0.01 3.4E-07 67.7 2.5 35 750-784 55-92 (528)
105 3a1b_A DNA (cytosine-5)-methyl 94.6 0.0076 2.6E-07 59.4 0.7 49 736-784 74-132 (159)
106 3lqh_A Histone-lysine N-methyl 94.1 0.0065 2.2E-07 60.7 -1.0 50 785-837 5-61 (183)
107 3pur_A Lysine-specific demethy 93.9 0.018 6.1E-07 65.7 1.9 40 799-839 54-94 (528)
108 3kv4_A PHD finger protein 8; e 93.6 0.0073 2.5E-07 67.6 -1.9 41 744-784 7-54 (447)
109 3vxv_A Methyl-CPG-binding doma 93.5 0.03 1E-06 48.2 2.1 41 291-331 8-51 (69)
110 3kv5_D JMJC domain-containing 93.0 0.015 5.1E-07 65.7 -0.5 39 800-839 49-88 (488)
111 2pv0_B DNA (cytosine-5)-methyl 93.0 0.02 6.7E-07 63.2 0.3 49 736-784 88-146 (386)
112 3c2i_A Methyl-CPG-binding prot 92.2 0.11 3.7E-06 47.6 4.0 39 291-329 26-67 (97)
113 3kv4_A PHD finger protein 8; e 90.1 0.037 1.2E-06 62.0 -1.5 46 787-838 9-55 (447)
114 1ub1_A MECP2, attachment regio 89.4 0.16 5.6E-06 48.8 2.6 40 291-330 40-82 (133)
115 2pv0_B DNA (cytosine-5)-methyl 88.1 0.08 2.8E-06 58.4 -0.6 81 741-837 50-146 (386)
116 4bbq_A Lysine-specific demethy 87.5 0.23 7.9E-06 45.1 2.2 33 752-784 74-112 (117)
117 2ku7_A MLL1 PHD3-CYP33 RRM chi 86.3 0.18 6.1E-06 45.4 0.8 34 753-786 2-44 (140)
118 4ap4_A E3 ubiquitin ligase RNF 85.2 0.12 4E-06 46.3 -1.0 90 740-838 6-121 (133)
119 3a1b_A DNA (cytosine-5)-methyl 84.5 0.12 4.1E-06 51.0 -1.4 81 741-837 36-132 (159)
120 2ku7_A MLL1 PHD3-CYP33 RRM chi 82.6 0.34 1.1E-05 43.6 0.8 35 803-837 2-43 (140)
121 3rsn_A SET1/ASH2 histone methy 67.3 2.5 8.5E-05 42.4 2.4 24 747-770 10-37 (177)
122 3rsn_A SET1/ASH2 histone methy 65.7 3.6 0.00012 41.2 3.2 46 787-838 9-58 (177)
123 1iym_A EL5; ring-H2 finger, ub 63.9 4.1 0.00014 31.3 2.6 30 741-770 5-38 (55)
124 2ct0_A Non-SMC element 1 homol 63.9 3.1 0.00011 35.9 2.1 31 740-770 14-45 (74)
125 2d8s_A Cellular modulator of i 63.4 1.5 5.2E-05 38.0 0.1 33 738-770 12-51 (80)
126 3k1l_B Fancl; UBC, ring, RWD, 55.6 5.2 0.00018 44.2 2.5 31 740-770 307-345 (381)
127 3pfq_A PKC-B, PKC-beta, protei 54.0 4.6 0.00016 46.4 1.9 77 741-821 48-148 (674)
128 1vyx_A ORF K3, K3RING; zinc-bi 53.0 1.9 6.5E-05 35.5 -1.1 45 739-783 4-53 (60)
129 3nw0_A Non-structural maintena 51.1 5.5 0.00019 41.0 1.7 30 741-770 180-210 (238)
130 2lq6_A Bromodomain-containing 47.9 9 0.00031 33.9 2.4 40 772-821 10-51 (87)
131 1x4j_A Ring finger protein 38; 47.4 7.5 0.00026 32.0 1.7 32 739-770 21-55 (75)
132 2k1p_A Zinc finger RAN-binding 46.1 8.8 0.0003 28.5 1.7 11 774-784 3-13 (33)
133 2kiz_A E3 ubiquitin-protein li 45.8 11 0.00036 30.4 2.3 33 738-770 11-46 (69)
134 2ecm_A Ring finger and CHY zin 45.3 4.2 0.00014 31.2 -0.2 31 740-770 4-38 (55)
135 2xqn_T Testin, TESS; metal-bin 42.8 11 0.00037 34.0 2.1 59 775-840 49-125 (126)
136 2ect_A Ring finger protein 126 42.0 18 0.00063 29.7 3.3 32 739-770 13-47 (78)
137 2lk0_A RNA-binding protein 5; 38.7 9.4 0.00032 28.1 0.8 10 775-784 3-12 (32)
138 1v87_A Deltex protein 2; ring- 38.5 13 0.00044 32.8 1.9 15 756-770 58-72 (114)
139 2yur_A Retinoblastoma-binding 38.2 9.6 0.00033 31.5 1.0 32 739-770 13-45 (74)
140 1weq_A PHD finger protein 7; s 36.1 21 0.00073 32.0 2.9 32 752-784 45-77 (85)
141 2l0b_A E3 ubiquitin-protein li 35.3 11 0.00037 32.5 0.9 32 739-770 38-72 (91)
142 2ct0_A Non-SMC element 1 homol 34.6 13 0.00045 32.0 1.3 30 785-822 18-47 (74)
143 1bor_A Transcription factor PM 34.3 33 0.0011 26.9 3.5 32 739-770 4-35 (56)
144 2ysl_A Tripartite motif-contai 32.9 30 0.001 27.8 3.1 31 739-770 18-49 (73)
145 1qz7_B Axin; beta-catenin, pro 30.7 23 0.00077 30.8 2.0 24 273-296 32-55 (70)
146 2ecl_A Ring-box protein 2; RNF 30.6 16 0.00053 31.0 1.1 14 757-770 46-59 (81)
147 1weo_A Cellulose synthase, cat 30.6 12 0.00041 34.1 0.3 44 740-784 15-65 (93)
148 2lq6_A Bromodomain-containing 30.5 17 0.00057 32.2 1.3 28 742-769 18-49 (87)
149 2ep4_A Ring finger protein 24; 29.4 24 0.00083 28.6 2.0 31 740-770 14-47 (74)
150 2dlq_A GLI-kruppel family memb 28.5 17 0.00057 31.1 0.9 11 803-813 66-76 (124)
151 2ea6_A Ring finger protein 4; 28.4 23 0.00079 27.9 1.7 32 739-770 13-51 (69)
152 3ng2_A RNF4, snurf, ring finge 27.6 22 0.00076 28.4 1.4 31 740-770 9-46 (71)
153 2rgt_A Fusion of LIM/homeobox 27.4 30 0.001 32.9 2.5 39 774-819 50-95 (169)
154 2ecn_A Ring finger protein 141 27.2 18 0.00062 29.1 0.8 30 740-770 14-43 (70)
155 2d8t_A Dactylidin, ring finger 26.3 27 0.00092 28.3 1.7 31 739-770 13-44 (71)
156 2ecj_A Tripartite motif-contai 26.0 36 0.0012 26.0 2.3 43 740-783 14-58 (58)
157 2egp_A Tripartite motif-contai 25.1 44 0.0015 27.1 2.8 30 740-770 11-41 (79)
158 3dpl_R Ring-box protein 1; ubi 25.0 18 0.00063 32.7 0.5 14 757-770 71-84 (106)
159 2i13_A AART; DNA binding, zinc 25.0 13 0.00045 34.6 -0.4 18 671-688 22-40 (190)
160 1n0z_A ZNF265; zinc finger, RN 24.8 32 0.0011 27.2 1.8 12 773-784 10-23 (45)
161 4a0k_B E3 ubiquitin-protein li 24.7 18 0.00061 33.7 0.4 33 738-770 45-95 (117)
162 2ecw_A Tripartite motif-contai 24.5 44 0.0015 27.2 2.8 30 740-770 18-48 (85)
163 2jrp_A Putative cytoplasmic pr 23.9 26 0.00089 31.2 1.3 22 742-763 3-28 (81)
164 3ztg_A E3 ubiquitin-protein li 23.9 18 0.00062 30.6 0.2 32 739-770 11-43 (92)
165 2d8v_A Zinc finger FYVE domain 23.3 41 0.0014 29.1 2.3 20 739-759 6-25 (67)
166 3lrq_A E3 ubiquitin-protein li 23.0 13 0.00044 32.6 -0.9 31 740-770 21-52 (100)
167 2jtn_A LIM domain-binding prot 22.7 55 0.0019 31.4 3.4 71 741-820 60-150 (182)
168 2djb_A Polycomb group ring fin 22.3 50 0.0017 26.8 2.6 32 739-770 13-45 (72)
169 2ecy_A TNF receptor-associated 20.7 31 0.001 27.5 1.0 30 740-770 14-44 (66)
170 2ct2_A Tripartite motif protei 20.5 26 0.0009 29.0 0.6 32 739-770 13-48 (88)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.77 E-value=2.5e-19 Score=163.34 Aligned_cols=95 Identities=28% Similarity=0.813 Sum_probs=81.7
Q ss_pred cccccccccccccCCce---eecCCCCCcccccccccCC--CCCCCccccccc-ccccCCCCCCCccCCCcCcccccccc
Q 003031 737 DDKNDDSCGICGDGGEL---ICCDNCPSAFHQACLSIQD--LPTGSWFCSNCT-CWICGDLVNDKEASSSFDALKCSQCE 810 (855)
Q Consensus 737 ed~ndD~C~VCgdGGeL---LcCD~CPraFHlsCLgp~~--vPeG~W~Cp~C~-C~ICge~~~D~e~~s~~~LL~CdqCe 810 (855)
.+.++++|.+|+++|++ ++|+.|+++||+.|+++.. ++.+.|+|+.|. |.+|++... ...++.|++|+
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~~C~~~~~------~~~ll~Cd~C~ 76 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGE------DSKMLVCDTCD 76 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCCTTTCCCSC------CTTEEECSSSC
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcccccCccCC------CCCeeECCCCC
Confidence 34688999999998876 9999999999999999844 457899999995 999998632 25689999999
Q ss_pred hhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 811 HKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 811 raYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
++||..|++++....|.+.|||+ .|..
T Consensus 77 ~~yH~~Cl~ppl~~~P~g~W~C~-~C~~ 103 (111)
T 2ysm_A 77 KGYHTFCLQPVMKSVPTNGWKCK-NCRI 103 (111)
T ss_dssp CEEEGGGSSSCCSSCCSSCCCCH-HHHC
T ss_pred cHHhHHhcCCccccCCCCCcCCc-CCcC
Confidence 99999999998888889999997 6643
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.73 E-value=1e-18 Score=161.13 Aligned_cols=94 Identities=30% Similarity=0.758 Sum_probs=80.2
Q ss_pred ccccccccC----------CceeecCCCCCcccccccccC-----CCCCCCcccccc-cccccCCCCCCCccCCCcCccc
Q 003031 742 DSCGICGDG----------GELICCDNCPSAFHQACLSIQ-----DLPTGSWFCSNC-TCWICGDLVNDKEASSSFDALK 805 (855)
Q Consensus 742 D~C~VCgdG----------GeLLcCD~CPraFHlsCLgp~-----~vPeG~W~Cp~C-~C~ICge~~~D~e~~s~~~LL~ 805 (855)
+.|.+|..+ ++|+.|+.|+++||+.||++. .++.+.|+|+.| .|.+|++.. +++.++.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~------~~~~ll~ 75 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSE------NDDQLLF 75 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCT------TTTTEEE
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccC------CCCceEE
Confidence 467788653 589999999999999999974 567899999999 599999852 3467999
Q ss_pred ccccchhchhhhccCCcCCCCCCceeeCCccHHHHhh
Q 003031 806 CSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEVGNK 842 (855)
Q Consensus 806 CdqCeraYHv~CL~p~~~~~p~G~WFCs~~CkeI~~~ 842 (855)
|++|+++||..|+.|++...|.+.|||+ .|...+..
T Consensus 76 Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~-~C~~~~~~ 111 (114)
T 2kwj_A 76 CDDCDRGYHMYCLNPPVAEPPEGSWSCH-LCWELLKE 111 (114)
T ss_dssp CSSSCCEEETTTSSSCCSSCCSSCCCCH-HHHHHHHH
T ss_pred cCCCCccccccccCCCccCCCCCCeECc-cccchhhc
Confidence 9999999999999998888889999998 88776653
No 3
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.71 E-value=8.2e-18 Score=154.99 Aligned_cols=89 Identities=33% Similarity=0.758 Sum_probs=80.5
Q ss_pred CCcccccccccccccCCceeecC--CCCCcccccccccCCCCCCCcccccccccccCCCCCCCccCCCcCcccccccchh
Q 003031 735 DEDDKNDDSCGICGDGGELICCD--NCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHK 812 (855)
Q Consensus 735 ~~ed~ndD~C~VCgdGGeLLcCD--~CPraFHlsCLgp~~vPeG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~CdqCera 812 (855)
+.+..++++|.+|+++|+||+|| .||++||+.||++..+|.|.|+||.|.|.+|++.. .+.|..|+++
T Consensus 9 ~~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~C~~C~k~~----------~~~C~~Cp~s 78 (107)
T 4gne_A 9 EPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAA----------VSFCEFCPHS 78 (107)
T ss_dssp -CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGBCTTTCSBC----------CEECSSSSCE
T ss_pred CCcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCCCCcCCCCC----------CcCcCCCCcc
Confidence 34556889999999999999999 89999999999999999999999999999999851 2789999999
Q ss_pred chhhhccCCcCCCCCCceeeC
Q 003031 813 YHGECLKDMSKGAVSEAWFCN 833 (855)
Q Consensus 813 YHv~CL~p~~~~~p~G~WFCs 833 (855)
||..|+++.+...+.+.|+|.
T Consensus 79 fC~~c~~g~l~~~~~~~~~c~ 99 (107)
T 4gne_A 79 FCKDHEKGALVPSALEGRLCC 99 (107)
T ss_dssp ECTTTCTTSCEECTTTTCEEC
T ss_pred hhhhccCCcceecCCCCceec
Confidence 999999998877788999985
No 4
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.67 E-value=1.4e-17 Score=152.85 Aligned_cols=92 Identities=28% Similarity=0.691 Sum_probs=77.4
Q ss_pred cccccccccc---------CCceeecCCCCCccccccccc-----CCCCCCCcccccc-cccccCCCCCCCccCCCcCcc
Q 003031 740 NDDSCGICGD---------GGELICCDNCPSAFHQACLSI-----QDLPTGSWFCSNC-TCWICGDLVNDKEASSSFDAL 804 (855)
Q Consensus 740 ndD~C~VCgd---------GGeLLcCD~CPraFHlsCLgp-----~~vPeG~W~Cp~C-~C~ICge~~~D~e~~s~~~LL 804 (855)
...+|.+|.. +++||.|+.|+++||.+||++ ..++.+.|+|+.| .|.+|++.+. +...++
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~-----~~~~ll 78 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGK-----NADNML 78 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCC-----TTCCCE
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCC-----CccceE
Confidence 3567888854 468999999999999999985 2567899999999 5999997532 235689
Q ss_pred cccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 805 KCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 805 ~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
.|++|+++||..|+.|++...|.+.|||+ .|+
T Consensus 79 ~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~-~C~ 110 (112)
T 3v43_A 79 FCDSCDRGFHMECCDPPLTRMPKGMWICQ-ICR 110 (112)
T ss_dssp ECTTTCCEECGGGCSSCCSSCCSSCCCCT-TTS
T ss_pred EcCCCCCeeecccCCCCCCCCCCCCeECC-CCC
Confidence 99999999999999999888889999997 554
No 5
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.23 E-value=4e-12 Score=130.37 Aligned_cols=112 Identities=22% Similarity=0.561 Sum_probs=73.2
Q ss_pred CCCcccccccccCCCccccccccccchhhhhcccccccCCccCCCcccccccccccccCCceeecCCCCCcccccccccC
Q 003031 692 KPNRPCLNLVMESGKPFTLCQLQAWSDEYKSRKSATRAGTVETDEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQ 771 (855)
Q Consensus 692 ~~rrP~~nI~LedGkSL~~CqleAwske~K~RKsg~R~k~v~~~~ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp~ 771 (855)
+.+.|+++|+|. |++|..|++..+...++..+.+.............++..|..|.
T Consensus 110 ~~~~~~a~i~l~-g~sl~~c~i~f~~e~~~ie~~~~~~~~~~~~~~r~~~~~C~~c~----------------------- 165 (226)
T 3ask_A 110 TARELYANVVLG-DDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCK----------------------- 165 (226)
T ss_dssp SCEEEEEEEECS-SSEEEEEEESCTTCCBCCCCSSSSCCCCSCCCCCCCSCCCTTTT-----------------------
T ss_pred cccceeeEEEec-CCcccceeEEEecccccccccccccccccccccccCCccccccc-----------------------
Confidence 344589999999 99999999876654333332221100000000112233344432
Q ss_pred CCCCCCcccccccccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCC-ceeeCCcc
Q 003031 772 DLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSE-AWFCNQSC 836 (855)
Q Consensus 772 ~vPeG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G-~WFCs~~C 836 (855)
+.+.|.|..|.|.+|++. .+++.++.|+.|+++||..|+.|++...|.| .|||+ .|
T Consensus 166 --~~~~w~C~~c~C~vC~~~------~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp-~C 222 (226)
T 3ask_A 166 --DDVNRLCRVCACHLCGGR------QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCP-EC 222 (226)
T ss_dssp --TCTTSCCTTTSCSSSCCC------CC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCG-GG
T ss_pred --CCcCEecCCCCCcCCCCC------CCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCc-CC
Confidence 456799999999999975 2346789999999999999999998888888 99998 55
No 6
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.10 E-value=4.2e-11 Score=99.77 Aligned_cols=50 Identities=48% Similarity=1.347 Sum_probs=45.4
Q ss_pred CcccccccccccccCCceeecCCCCCccccccccc--CCCCCCCcccccccc
Q 003031 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCTC 785 (855)
Q Consensus 736 ~ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~C 785 (855)
+++.++++|.+|+++|+|++||.|+++||+.|+++ ..+|.|+|+|+.|..
T Consensus 4 ~~d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 55 (61)
T 1mm2_A 4 GSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 55 (61)
T ss_dssp CSCSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTT
T ss_pred cccCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcC
Confidence 34668899999999999999999999999999995 788999999999974
No 7
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=99.09 E-value=1.3e-11 Score=118.87 Aligned_cols=49 Identities=37% Similarity=0.934 Sum_probs=43.9
Q ss_pred cccccccccccccCCceeecCCCCCcccccccccCC---------CCCCCcccccccc
Q 003031 737 DDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQD---------LPTGSWFCSNCTC 785 (855)
Q Consensus 737 ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp~~---------vPeG~W~Cp~C~C 785 (855)
++.++++|.+|++||+|++||.||++||..|+.+.. .|.++|+|+.|.+
T Consensus 59 ~Dg~~d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 59 SDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TTSCBCSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCCeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 467899999999999999999999999999999622 4899999999975
No 8
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.08 E-value=6.9e-11 Score=105.88 Aligned_cols=51 Identities=33% Similarity=0.823 Sum_probs=45.8
Q ss_pred CCcccccccccccccCCceeecCCCCCccccccccc--CCCCCCCcccccccc
Q 003031 735 DEDDKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCTC 785 (855)
Q Consensus 735 ~~ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~C 785 (855)
...+.+++.|.+|+++|+|++||.|+++||+.|+.| ..+|.|+|+|+.|..
T Consensus 19 ~~~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 19 GTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp CSSSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred cccCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccC
Confidence 345678899999999999999999999999999965 789999999999973
No 9
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.04 E-value=7.9e-11 Score=99.29 Aligned_cols=48 Identities=60% Similarity=1.432 Sum_probs=43.9
Q ss_pred ccccccccccccCCceeecCCCCCccccccccc--CCCCCCCcccccccc
Q 003031 738 DKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCTC 785 (855)
Q Consensus 738 d~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~C 785 (855)
+.+++.|.+|+++|+|++||.|+++||+.|++| ..+|.|.|+|+.|.-
T Consensus 5 ~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 5 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CSCCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 457899999999999999999999999999995 688999999999973
No 10
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.03 E-value=9.9e-11 Score=99.44 Aligned_cols=47 Identities=32% Similarity=0.824 Sum_probs=42.6
Q ss_pred ccccccccccccCCceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 738 DKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 738 d~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
..+...|.+|+++|+||+||.|+++||..||.+ ..+|.|.|+|+.|.
T Consensus 9 ~~~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~ 57 (66)
T 2lri_C 9 LAPGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCS 57 (66)
T ss_dssp CCTTCCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTT
T ss_pred CCCCCCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECcccc
Confidence 445678999999999999999999999999985 68999999999996
No 11
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=1.1e-10 Score=95.42 Aligned_cols=48 Identities=33% Similarity=1.065 Sum_probs=43.9
Q ss_pred cccccccccccccCCceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 737 DDKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 737 ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
.+.+++.|.+|+++|+|++||.|+++||+.|++| ..+|.+.|+|+.|.
T Consensus 5 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 5 SSGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CCSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred cCCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 4567899999999999999999999999999995 68899999999985
No 12
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.02 E-value=1.1e-10 Score=97.21 Aligned_cols=48 Identities=42% Similarity=1.166 Sum_probs=44.0
Q ss_pred cccccccccccccCCceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 737 DDKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 737 ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
++.+++.|.+|+++|+|++||.|+++||+.|+++ ..+|.|.|+|+.|.
T Consensus 7 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~ 56 (61)
T 2l5u_A 7 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 56 (61)
T ss_dssp SSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGG
T ss_pred cCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccc
Confidence 4567789999999999999999999999999997 67899999999986
No 13
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.02 E-value=1.1e-10 Score=96.54 Aligned_cols=48 Identities=33% Similarity=1.008 Sum_probs=43.9
Q ss_pred ccccccccccccCCceeecCCCCCccccccccc--CCCCCCCcccccccc
Q 003031 738 DKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCTC 785 (855)
Q Consensus 738 d~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~C 785 (855)
+.+++.|.+|+++|+|++||.|+++||+.|++| ..+|.|.|+|+.|.-
T Consensus 2 d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 2 MIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CCCCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 457899999999999999999999999999995 678999999999964
No 14
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.00 E-value=1.2e-10 Score=116.48 Aligned_cols=49 Identities=43% Similarity=1.272 Sum_probs=44.6
Q ss_pred CcccccccccccccCCceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 736 ~ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
+++.++++|.+|+++|+|++||+|+++||..|+.| ..+|.|.|+|+.|.
T Consensus 2 ~~d~~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~ 52 (207)
T 3u5n_A 2 DDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 52 (207)
T ss_dssp -CCSSCSSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTS
T ss_pred CCCCCCCCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCcee
Confidence 35678899999999999999999999999999976 67899999999997
No 15
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.99 E-value=1.7e-10 Score=113.26 Aligned_cols=46 Identities=43% Similarity=1.299 Sum_probs=43.0
Q ss_pred cccccccccccCCceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 739 KNDDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
+|+++|.+|++||+|++||.|+++||..|+.| ..+|.|.|+|+.|.
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~ 49 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCR 49 (184)
T ss_dssp CSCSSCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTS
T ss_pred CCCCccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECcccc
Confidence 57899999999999999999999999999975 67899999999997
No 16
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.95 E-value=2.7e-10 Score=101.46 Aligned_cols=50 Identities=36% Similarity=0.868 Sum_probs=45.2
Q ss_pred cccccccccccccCC-----ceeecCCCCCcccccccccCCCCCCCccccccccc
Q 003031 737 DDKNDDSCGICGDGG-----ELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCW 786 (855)
Q Consensus 737 ed~ndD~C~VCgdGG-----eLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~C~ 786 (855)
...+++.|.+|++++ +||+||.|+.+||+.|++++.+|.|.|+|+.|...
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCc
Confidence 345778999999987 99999999999999999998899999999999754
No 17
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.94 E-value=2e-10 Score=98.81 Aligned_cols=48 Identities=38% Similarity=0.955 Sum_probs=43.6
Q ss_pred ccccccccccccCC-----ceeecCCCCCcccccccccCCCCCCCcccccccc
Q 003031 738 DKNDDSCGICGDGG-----ELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTC 785 (855)
Q Consensus 738 d~ndD~C~VCgdGG-----eLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~C 785 (855)
..+++.|.+|++++ +||+||.|+++||+.|++++.+|+|+|+|+.|..
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 45678999999875 9999999999999999999899999999999964
No 18
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.91 E-value=5.4e-10 Score=95.68 Aligned_cols=55 Identities=29% Similarity=0.820 Sum_probs=47.8
Q ss_pred CCCcccccccccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCC-ceeeCCcc
Q 003031 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSE-AWFCNQSC 836 (855)
Q Consensus 775 eG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G-~WFCs~~C 836 (855)
.+.|+|+.|.|.+|++. .+++.++.|+.|+++||..||.|++...|.| .|||+ .|
T Consensus 11 ~~~w~C~~C~C~~C~~~------~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~-~C 66 (70)
T 3asl_A 11 DVNRLCRVCACHLCGGR------QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCP-EC 66 (70)
T ss_dssp CTTSCCTTTSBTTTCCC------SCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCT-TT
T ss_pred CCCeECCCCCCcCCCCc------CCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCc-Cc
Confidence 45799999999999975 2346799999999999999999988888888 99998 45
No 19
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.90 E-value=4.5e-10 Score=98.12 Aligned_cols=56 Identities=29% Similarity=0.802 Sum_probs=48.1
Q ss_pred CCCcccccccccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCc-eeeCCccH
Q 003031 775 TGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEA-WFCNQSCQ 837 (855)
Q Consensus 775 eG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~-WFCs~~Ck 837 (855)
++.|+|+.|.|.+|++.. ....++.|+.|+++||..|+.|++...|.+. |||+ .|.
T Consensus 19 ~~~W~C~~C~C~vC~~~~------d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~-~C~ 75 (77)
T 3shb_A 19 DVNRLCRVCACHLCGGRQ------DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCP-ECR 75 (77)
T ss_dssp CTTSCCTTTSBTTTCCCS------CGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCT-TTC
T ss_pred CCCCCCCCCcCCccCCCC------CCcceeEeCCCCCccCcccCCCcccCCCCCCceECc-Ccc
Confidence 357999999999999862 3367899999999999999999988888888 9997 554
No 20
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.3e-09 Score=97.74 Aligned_cols=56 Identities=29% Similarity=0.774 Sum_probs=48.6
Q ss_pred CcccccccccccccCC---ceeecCCCCCccccccccc--CCCCCCCcccccccccccCCC
Q 003031 736 EDDKNDDSCGICGDGG---ELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCTCWICGDL 791 (855)
Q Consensus 736 ~ed~ndD~C~VCgdGG---eLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~C~ICge~ 791 (855)
....++..|.+|+.++ .||+||.|+++||+.||+| ..+|.|+|+|+.|....|+++
T Consensus 11 ~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~~~~~ 71 (92)
T 2e6r_A 11 AQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQP 71 (92)
T ss_dssp CCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHHHSCC
T ss_pred hhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCccccCC
Confidence 3455678899999876 5999999999999999994 789999999999998888765
No 21
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.2e-09 Score=95.23 Aligned_cols=54 Identities=31% Similarity=0.780 Sum_probs=47.1
Q ss_pred CCcccccccccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCC-ceeeCCcc
Q 003031 776 GSWFCSNCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSE-AWFCNQSC 836 (855)
Q Consensus 776 G~W~Cp~C~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G-~WFCs~~C 836 (855)
..|+|+.|.|.+|++. .+++.++.|+.|+++||..||.|++...|.| .|||+ .|
T Consensus 20 ~~w~C~~c~C~vC~~~------~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~-~C 74 (77)
T 2e6s_A 20 PEKKCHSCSCRVCGGK------HEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCP-SC 74 (77)
T ss_dssp SSSCCSSSSCSSSCCC------CCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCT-TT
T ss_pred CCeECCCCCCcCcCCc------CCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCc-Cc
Confidence 4699999999999975 2346799999999999999999998888888 99998 55
No 22
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.79 E-value=2e-09 Score=89.96 Aligned_cols=48 Identities=27% Similarity=0.854 Sum_probs=41.9
Q ss_pred ccccccccccccC-----CceeecCCCCCcccccccccCC----C-CCCCcccccccc
Q 003031 738 DKNDDSCGICGDG-----GELICCDNCPSAFHQACLSIQD----L-PTGSWFCSNCTC 785 (855)
Q Consensus 738 d~ndD~C~VCgdG-----GeLLcCD~CPraFHlsCLgp~~----v-PeG~W~Cp~C~C 785 (855)
+.++..|.+|+.+ ++|++||.|+++||+.|++|+. + |.+.|+|+.|..
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcC
Confidence 4567899999987 8999999999999999999842 3 889999999974
No 23
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.78 E-value=2.2e-09 Score=106.70 Aligned_cols=46 Identities=35% Similarity=0.892 Sum_probs=42.3
Q ss_pred cccccccccCCceeecCCCCCccccccccc--CCCCCCCccccccccc
Q 003031 741 DDSCGICGDGGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCTCW 786 (855)
Q Consensus 741 dD~C~VCgdGGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~C~ 786 (855)
++.|.+|+++|+|++||+|+++||..|+.| ..+|.|.|+|+.|...
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 578999999999999999999999999975 6789999999999853
No 24
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.75 E-value=3.1e-09 Score=84.83 Aligned_cols=42 Identities=43% Similarity=1.121 Sum_probs=37.3
Q ss_pred cccccccCC---ceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 743 SCGICGDGG---ELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 743 ~C~VCgdGG---eLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
.|.+|++++ +|+.||.|+++||+.|+.| ..+|.|+|+|+.|.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTS
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcc
Confidence 589999754 7999999999999999974 78899999999985
No 25
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.72 E-value=3.2e-09 Score=94.36 Aligned_cols=49 Identities=29% Similarity=0.727 Sum_probs=42.3
Q ss_pred ccccccccccccC-----CceeecCCCCCcccccccccC------CCCCCCccccccccc
Q 003031 738 DKNDDSCGICGDG-----GELICCDNCPSAFHQACLSIQ------DLPTGSWFCSNCTCW 786 (855)
Q Consensus 738 d~ndD~C~VCgdG-----GeLLcCD~CPraFHlsCLgp~------~vPeG~W~Cp~C~C~ 786 (855)
.+++.+|.+|+.+ ++||+||.|+++||+.||+|+ .+|.|.|+|+.|...
T Consensus 13 ~e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 13 MEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 3456789999986 789999999999999999974 379999999999743
No 26
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=2.6e-08 Score=86.96 Aligned_cols=45 Identities=33% Similarity=0.986 Sum_probs=40.1
Q ss_pred ccccccccc---cCCceeecCCCCCccccccccc--CCCCCC-Cccccccc
Q 003031 740 NDDSCGICG---DGGELICCDNCPSAFHQACLSI--QDLPTG-SWFCSNCT 784 (855)
Q Consensus 740 ndD~C~VCg---dGGeLLcCD~CPraFHlsCLgp--~~vPeG-~W~Cp~C~ 784 (855)
.+..|.+|+ ++++|++||.|+++||+.||+| ..+|.| +|+|+.|.
T Consensus 25 ~~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 25 HSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp SSSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred CCCCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 345899999 4889999999999999999995 789999 99999985
No 27
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.56 E-value=9.9e-09 Score=97.62 Aligned_cols=50 Identities=36% Similarity=1.005 Sum_probs=44.0
Q ss_pred CcccccccccccccCCceeecCCCCCcccccccccC-------CC--CCCCcccccccc
Q 003031 736 EDDKNDDSCGICGDGGELICCDNCPSAFHQACLSIQ-------DL--PTGSWFCSNCTC 785 (855)
Q Consensus 736 ~ed~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp~-------~v--PeG~W~Cp~C~C 785 (855)
+++.++++|.+|++||+|++||.||++||..|+.+. .+ |.+.|+|..|.+
T Consensus 52 d~Dg~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 52 DSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CTTSCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 457788999999999999999999999999999852 33 789999999974
No 28
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.53 E-value=7.1e-08 Score=82.96 Aligned_cols=46 Identities=41% Similarity=1.092 Sum_probs=40.4
Q ss_pred cccccccccccc--CCceeecCC--CC-CcccccccccCCCCCCCccccccc
Q 003031 738 DKNDDSCGICGD--GGELICCDN--CP-SAFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 738 d~ndD~C~VCgd--GGeLLcCD~--CP-raFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
+.+..+| +|++ .|+||.||. |+ .+||..|+++...|.+.|+|+.|.
T Consensus 13 ~~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~ 63 (71)
T 1wen_A 13 PNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCS 63 (71)
T ss_dssp TTSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTS
T ss_pred CCCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCC
Confidence 3445678 7998 789999999 98 699999999999999999999986
No 29
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.53 E-value=3.6e-08 Score=84.43 Aligned_cols=42 Identities=38% Similarity=1.129 Sum_probs=38.2
Q ss_pred cccccc---cCCceeecCCCCCccccccccc--CCCCCC-Cccccccc
Q 003031 743 SCGICG---DGGELICCDNCPSAFHQACLSI--QDLPTG-SWFCSNCT 784 (855)
Q Consensus 743 ~C~VCg---dGGeLLcCD~CPraFHlsCLgp--~~vPeG-~W~Cp~C~ 784 (855)
.|.+|+ ++++||+||.|+++||+.||+| ..+|.| +|+|+.|.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 67 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCcc
Confidence 688898 5789999999999999999994 788999 99999986
No 30
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=4.9e-08 Score=87.46 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=47.5
Q ss_pred CCCccccccc-ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 775 TGSWFCSNCT-CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 775 eG~W~Cp~C~-C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
...|.|..+. |.+|++.. ....|+.|+.|+++||..|+.|++...|.+.|||+ .|..
T Consensus 8 ~s~~~~~~~~~C~vC~~~~------~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~-~C~~ 65 (92)
T 2e6r_A 8 HSSAQFIDSYICQVCSRGD------EDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCP-KCIL 65 (92)
T ss_dssp CCCCCCCCCCCCSSSCCSG------GGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCH-HHHH
T ss_pred CchhhccCCCCCccCCCcC------CCCCEEEcCCCCchhccccCCCCcccCCCCCcCCc-cCcC
Confidence 4569999885 99999752 23568999999999999999998888889999998 6654
No 31
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.45 E-value=5.3e-08 Score=80.93 Aligned_cols=44 Identities=45% Similarity=1.187 Sum_probs=39.2
Q ss_pred cccccccccc--CCceeecCC--CC-CcccccccccCCCCCCCccccccc
Q 003031 740 NDDSCGICGD--GGELICCDN--CP-SAFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 740 ndD~C~VCgd--GGeLLcCD~--CP-raFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
+..+| +|++ .|+||.||. |+ ..||..|+++...|.|.|+|+.|.
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~ 56 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCV 56 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHH
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCcc
Confidence 44567 8998 789999999 98 699999999999999999999985
No 32
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.45 E-value=5.4e-08 Score=80.99 Aligned_cols=44 Identities=43% Similarity=1.141 Sum_probs=39.0
Q ss_pred cccccccccc--CCceeecCC--CC-CcccccccccCCCCCCCccccccc
Q 003031 740 NDDSCGICGD--GGELICCDN--CP-SAFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 740 ndD~C~VCgd--GGeLLcCD~--CP-raFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
...+| +|++ .|+||.||. |+ .+||..|+++..+|.|.|+|+.|.
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~ 57 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCS 57 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHH
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCcc
Confidence 34567 8987 789999999 88 799999999999999999999885
No 33
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.44 E-value=5.7e-08 Score=81.54 Aligned_cols=44 Identities=43% Similarity=1.171 Sum_probs=39.2
Q ss_pred cccccccccc--CCceeecCC--CC-CcccccccccCCCCCCCccccccc
Q 003031 740 NDDSCGICGD--GGELICCDN--CP-SAFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 740 ndD~C~VCgd--GGeLLcCD~--CP-raFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
+..+| +|++ .|+||.||. |+ ..||..|+++...|.+.|+|+.|.
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~ 58 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCR 58 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHH
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcc
Confidence 34567 8998 789999999 87 899999999999999999999985
No 34
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.43 E-value=1.5e-07 Score=84.84 Aligned_cols=45 Identities=42% Similarity=1.122 Sum_probs=39.8
Q ss_pred ccccccccccc--CCceeecCC--CC-CcccccccccCCCCCCCccccccc
Q 003031 739 KNDDSCGICGD--GGELICCDN--CP-SAFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgd--GGeLLcCD~--CP-raFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
....+| +|++ .|+||.||. |+ .+||..|+++...|.+.|+|+.|.
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~ 83 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCS 83 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTC
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCcc
Confidence 344667 9998 789999999 88 699999999999999999999886
No 35
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.40 E-value=1e-07 Score=76.10 Aligned_cols=46 Identities=24% Similarity=0.647 Sum_probs=38.3
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
|.+|++.. ....++.|+.|+++||..|+.++....|.+.|||+ .|.
T Consensus 3 C~vC~~~~------~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~-~C~ 48 (51)
T 1f62_A 3 CKVCRKKG------EDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCP-ACQ 48 (51)
T ss_dssp CTTTCCSS------CCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCT-TTS
T ss_pred CCCCCCCC------CCCCEEECCCCChhhCcccCCCCcCCCCCCcEECc-Ccc
Confidence 78888752 23578999999999999999998777889999997 553
No 36
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.39 E-value=9.8e-08 Score=81.10 Aligned_cols=46 Identities=28% Similarity=0.703 Sum_probs=39.0
Q ss_pred cccccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 782 NCTCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 782 ~C~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
...|.+|++. +.++.|+.|+++||..|+.+++...|.+.|||+ .|.
T Consensus 12 ~~~C~vC~~~---------~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~-~C~ 57 (66)
T 2lri_C 12 GARCGVCGDG---------TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCR-SCS 57 (66)
T ss_dssp TCCCTTTSCC---------TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCT-TTT
T ss_pred CCCcCCCCCC---------CeEEECCCCCCceecccCCCccCcCCCCCEECc-ccc
Confidence 3458889853 458999999999999999999888889999997 664
No 37
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.38 E-value=1.1e-07 Score=81.26 Aligned_cols=49 Identities=27% Similarity=0.651 Sum_probs=39.9
Q ss_pred cccccccccccccC---CceeecCCCCCcccccccccCC--CCCCCcccccccc
Q 003031 737 DDKNDDSCGICGDG---GELICCDNCPSAFHQACLSIQD--LPTGSWFCSNCTC 785 (855)
Q Consensus 737 ed~ndD~C~VCgdG---GeLLcCD~CPraFHlsCLgp~~--vPeG~W~Cp~C~C 785 (855)
+..+..+|.+|+.+ +.||.||.|+.+||..|+++.. .+.+.|+|+.|.-
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHH
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccC
Confidence 34556789999874 5799999999999999999844 3458999999963
No 38
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.33 E-value=2.3e-07 Score=85.20 Aligned_cols=43 Identities=33% Similarity=1.015 Sum_probs=38.2
Q ss_pred ccccccccC----CceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 742 DSCGICGDG----GELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 742 D~C~VCgdG----GeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
..|.+|+++ ++|++||.|+++||..||.| ..+|+|.|+|+.|+
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~ 110 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR 110 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTS
T ss_pred CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCC
Confidence 369999875 48999999999999999975 78999999999986
No 39
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.32 E-value=2.1e-07 Score=95.71 Aligned_cols=44 Identities=34% Similarity=0.997 Sum_probs=36.3
Q ss_pred ccccccccc---CCceeecCCCCCccccccccc--CCCCCC-Cccccccc
Q 003031 741 DDSCGICGD---GGELICCDNCPSAFHQACLSI--QDLPTG-SWFCSNCT 784 (855)
Q Consensus 741 dD~C~VCgd---GGeLLcCD~CPraFHlsCLgp--~~vPeG-~W~Cp~C~ 784 (855)
+..|.+|+. +++|++||.|+++||..||+| ..+|.| +|+|+.|.
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCc
Confidence 457999996 789999999999999999995 688999 99999996
No 40
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.31 E-value=2.6e-07 Score=80.76 Aligned_cols=42 Identities=36% Similarity=1.100 Sum_probs=37.1
Q ss_pred cccccccC---CceeecCCCCCccccccccc--CCCCCCC-ccccccc
Q 003031 743 SCGICGDG---GELICCDNCPSAFHQACLSI--QDLPTGS-WFCSNCT 784 (855)
Q Consensus 743 ~C~VCgdG---GeLLcCD~CPraFHlsCLgp--~~vPeG~-W~Cp~C~ 784 (855)
.|.+|+.+ ++||+||.|+++||+.||+| ..+|.|. |+|+.|.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcc
Confidence 58888764 68999999999999999995 7889998 9999985
No 41
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.30 E-value=2.6e-07 Score=76.27 Aligned_cols=46 Identities=30% Similarity=0.713 Sum_probs=38.6
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHHHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQEVG 840 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~CkeI~ 840 (855)
|.+|++. +.++.|+.|+++||..|+.|+....|.+.|||+ .|..-.
T Consensus 8 C~vC~~~---------g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~-~C~~~~ 53 (60)
T 2puy_A 8 CSVCRKS---------GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICP-RCQDQM 53 (60)
T ss_dssp CTTTCCC---------SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCH-HHHHHH
T ss_pred CcCCCCC---------CcEEEcCCCCcCEECCcCCCCcCCCCCCceECh-hccChh
Confidence 7788863 468999999999999999998888889999998 565543
No 42
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=1.8e-07 Score=76.47 Aligned_cols=43 Identities=33% Similarity=0.780 Sum_probs=36.5
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
|.+|++. +.++.|+.|+++||..|+.++....|.+.|||+ .|.
T Consensus 12 C~vC~~~---------g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~-~C~ 54 (56)
T 2yql_A 12 CSVCRKS---------GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICP-RCQ 54 (56)
T ss_dssp CSSSCCS---------SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCH-HHH
T ss_pred CccCCCC---------CeEEEcCCCCcceECccCCCCcCCCCCCceECh-hhh
Confidence 6777763 468999999999999999998888889999997 553
No 43
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.26 E-value=3.4e-07 Score=82.37 Aligned_cols=46 Identities=37% Similarity=1.167 Sum_probs=38.9
Q ss_pred cccccccccccc--CCceeecCC--CC-CcccccccccCCCCCCCccccc-cc
Q 003031 738 DKNDDSCGICGD--GGELICCDN--CP-SAFHQACLSIQDLPTGSWFCSN-CT 784 (855)
Q Consensus 738 d~ndD~C~VCgd--GGeLLcCD~--CP-raFHlsCLgp~~vPeG~W~Cp~-C~ 784 (855)
+....+| +|+. .|+||.||. |+ .+||..|+++...|.+.|+|+. |.
T Consensus 23 ~~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 23 NQEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCK 74 (90)
T ss_dssp -CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHH
T ss_pred CCCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhc
Confidence 3445678 8996 679999999 55 7999999999999999999999 85
No 44
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.26 E-value=3e-07 Score=76.59 Aligned_cols=44 Identities=27% Similarity=0.705 Sum_probs=37.1
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
|.+|++. +.++.|+.|+++||..|+.++....+.+.|||+ .|..
T Consensus 14 C~vC~~~---------g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~-~C~~ 57 (61)
T 2l5u_A 14 CEVCQQG---------GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCP-HCEK 57 (61)
T ss_dssp CTTTSCC---------SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCT-TGGG
T ss_pred CccCCCC---------CcEEECCCCChhhhhhccCCCCCCCCCCceECc-cccc
Confidence 6677753 568999999999999999998777789999997 6653
No 45
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.26 E-value=3.3e-07 Score=76.34 Aligned_cols=43 Identities=30% Similarity=0.768 Sum_probs=36.4
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
|.+|++. +.++.|+.|+++||..|+.++....+.+.|||+ .|.
T Consensus 12 C~vC~~~---------g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~-~C~ 54 (61)
T 1mm2_A 12 CRVCKDG---------GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCP-RCT 54 (61)
T ss_dssp CTTTCCC---------SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCT-TTT
T ss_pred CCCCCCC---------CCEEEcCCCCHHHcccccCCCcCcCCCCccCCh-hhc
Confidence 6777753 468999999999999999998878889999997 553
No 46
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.26 E-value=2.8e-07 Score=84.94 Aligned_cols=43 Identities=40% Similarity=1.037 Sum_probs=38.5
Q ss_pred cccccccc---CCceeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 742 DSCGICGD---GGELICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 742 D~C~VCgd---GGeLLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
..|.+|+. +++|+.||.|+++||+.||+| ..+|.|+|+|+.|.
T Consensus 59 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~ 106 (114)
T 2kwj_A 59 KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCW 106 (114)
T ss_dssp CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHH
T ss_pred CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECcccc
Confidence 36899987 679999999999999999995 78999999999885
No 47
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.25 E-value=2.8e-07 Score=77.71 Aligned_cols=43 Identities=30% Similarity=0.730 Sum_probs=36.3
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
|.+|+.. +.++.|+.|+++||..|+.++....|.+.|||+ .|.
T Consensus 11 C~vC~~~---------g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~-~C~ 53 (66)
T 1xwh_A 11 CAVCRDG---------GELICCDGCPRAFHLACLSPPLREIPSGTWRCS-SCL 53 (66)
T ss_dssp BSSSSCC---------SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCH-HHH
T ss_pred CccCCCC---------CCEEEcCCCChhhcccccCCCcCcCCCCCeECc-ccc
Confidence 5666653 468999999999999999998878889999997 665
No 48
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.23 E-value=8.1e-07 Score=79.69 Aligned_cols=53 Identities=25% Similarity=0.574 Sum_probs=41.7
Q ss_pred CCCcccccc-cccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 775 TGSWFCSNC-TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 775 eG~W~Cp~C-~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
...|....- .|.+|++. +.++.|+.|+++||..|+.|+....|.|.|||+ .|.
T Consensus 17 ~~~~~d~n~~~C~vC~~~---------g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~-~C~ 70 (88)
T 1fp0_A 17 EFGTLDDSATICRVCQKP---------GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCS-LCH 70 (88)
T ss_dssp CCCSSSSSSSCCSSSCSS---------SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCC-SCC
T ss_pred cccccCCCCCcCcCcCCC---------CCEEECCCCCCceecccCCCCCCCCcCCCcCCc-ccc
Confidence 334444433 38889864 468999999999999999998888889999998 554
No 49
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.23 E-value=4.8e-07 Score=82.38 Aligned_cols=43 Identities=37% Similarity=1.061 Sum_probs=38.1
Q ss_pred ccccccccCCc---eeecCCCCCccccccccc--CCCCCCCccccccc
Q 003031 742 DSCGICGDGGE---LICCDNCPSAFHQACLSI--QDLPTGSWFCSNCT 784 (855)
Q Consensus 742 D~C~VCgdGGe---LLcCD~CPraFHlsCLgp--~~vPeG~W~Cp~C~ 784 (855)
..|.+|+.+++ |+.||.|+++||..|+.+ ..+|.+.|+|+.|.
T Consensus 55 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~ 102 (111)
T 2ysm_A 55 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCR 102 (111)
T ss_dssp CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHH
T ss_pred CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCc
Confidence 36999998765 999999999999999995 68899999999875
No 50
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.17 E-value=7.1e-07 Score=79.32 Aligned_cols=55 Identities=22% Similarity=0.707 Sum_probs=42.5
Q ss_pred cccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCC----CCCCceeeCCccHHHHhhh
Q 003031 784 TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKG----AVSEAWFCNQSCQEVGNKL 843 (855)
Q Consensus 784 ~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~----~p~G~WFCs~~CkeI~~~L 843 (855)
.|.+|++... .....+++|+.|+++||..|+.|+... .+.+.|||+ .|.......
T Consensus 18 ~C~vC~~~~~----~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~-~C~~~~~~~ 76 (88)
T 1wev_A 18 ACVVCRQMTV----ASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCA-RCTRQMKRM 76 (88)
T ss_dssp SCSSSCCCCC----CTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCH-HHHHHHCCS
T ss_pred cCCCCCCCCC----CCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCc-cccchhhhh
Confidence 4888987521 223679999999999999999998763 679999996 777655554
No 51
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.02 E-value=1e-06 Score=73.45 Aligned_cols=49 Identities=24% Similarity=0.707 Sum_probs=37.4
Q ss_pred cccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCC--C-CCCceeeCCccH
Q 003031 784 TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKG--A-VSEAWFCNQSCQ 837 (855)
Q Consensus 784 ~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~--~-p~G~WFCs~~Ck 837 (855)
.|.+|+... ....+.|+.|+.|+++||..|+.++... . +.+.|||+ .|.
T Consensus 8 ~C~vC~~~~----~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~-~C~ 59 (66)
T 2yt5_A 8 VCTICQEEY----SEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCR-QCV 59 (66)
T ss_dssp CBSSSCCCC----CBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCH-HHH
T ss_pred CCCCCCCCC----CCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECC-CCc
Confidence 377888641 1234679999999999999999997654 2 68999997 664
No 52
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.97 E-value=4.8e-06 Score=75.28 Aligned_cols=41 Identities=37% Similarity=1.052 Sum_probs=33.5
Q ss_pred cccccccCCceeecCCCCCcccccccccC--CCCCCCccccccc
Q 003031 743 SCGICGDGGELICCDNCPSAFHQACLSIQ--DLPTGSWFCSNCT 784 (855)
Q Consensus 743 ~C~VCgdGGeLLcCD~CPraFHlsCLgp~--~vPeG~W~Cp~C~ 784 (855)
+|..+.++|.||+||.|+.+||..|+++. .+| +.|+|+.|.
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~~C~ 74 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCERCQ 74 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCTTTS
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCC-CCEECCCCc
Confidence 35555568899999999999999999983 445 479999996
No 53
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.96 E-value=2.2e-06 Score=73.72 Aligned_cols=48 Identities=29% Similarity=0.587 Sum_probs=37.4
Q ss_pred cccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 784 TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 784 ~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
.|.+|++... .+...++.|+.|+++||..|+.++. .|.|.|||+ .|..
T Consensus 18 ~C~vC~~~~s----~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~-~C~~ 65 (71)
T 2ku3_A 18 VCSICMDGES----QNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCR-HCLQ 65 (71)
T ss_dssp SCSSSCCCCC----CSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCH-HHHH
T ss_pred CCCCCCCCCC----CCCCCEEECCCCCCccccccCCCCc--CCCCCcCCc-cCcC
Confidence 3788887521 2346799999999999999999873 668999997 6654
No 54
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.95 E-value=2.5e-06 Score=83.79 Aligned_cols=44 Identities=25% Similarity=0.676 Sum_probs=37.3
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
|.+|++. +.++.|+.|+++||..|+.|+....|.|.|+|+ .|..
T Consensus 7 C~~C~~~---------g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~-~C~~ 50 (184)
T 3o36_A 7 CAVCQNG---------GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICT-FCRD 50 (184)
T ss_dssp CTTTCCC---------SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCT-TTSC
T ss_pred cccCCCC---------CeeeecCCCCcccCccccCCCCCCCCCCCEECc-cccC
Confidence 6777753 558999999999999999998888889999998 6654
No 55
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.94 E-value=2.1e-06 Score=85.91 Aligned_cols=44 Identities=27% Similarity=0.670 Sum_probs=37.3
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
|.+|+.. +.++.|+.|+++||..|+.|+....|.|.|+|+ .|..
T Consensus 10 C~~C~~~---------g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~-~C~~ 53 (207)
T 3u5n_A 10 CAVCQNG---------GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICT-FCRD 53 (207)
T ss_dssp BTTTCCC---------EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCT-TTSC
T ss_pred CCCCCCC---------CceEEcCCCCCccCCccCCCCCCCCCCCCEEeC-ceeC
Confidence 6777764 458999999999999999998888889999998 5654
No 56
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.93 E-value=3.9e-06 Score=71.72 Aligned_cols=47 Identities=26% Similarity=0.661 Sum_probs=36.9
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
|.+|++.. ++..++.|+.|+++||..|+.++....+.+.|||+ .|..
T Consensus 21 C~~C~~~~------~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~-~C~~ 67 (75)
T 2k16_A 21 CPGCNKPD------DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCP-KCAN 67 (75)
T ss_dssp BTTTTBCC------SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCT-TTHH
T ss_pred CCCCCCCC------CCCCEEEcCCCCcccccccCCCCccCCCCCCEECh-hccC
Confidence 56677652 23468999999999999999998766667899998 5654
No 57
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.88 E-value=3.7e-06 Score=83.67 Aligned_cols=44 Identities=30% Similarity=0.748 Sum_probs=37.8
Q ss_pred cccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 784 TCWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 784 ~C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
.|.+|+.. +.++.|+.|+++||..|+.|+....+.|.|+|+ .|.
T Consensus 4 ~C~~C~~~---------g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~-~C~ 47 (189)
T 2ro1_A 4 ICRVCQKP---------GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCS-LCH 47 (189)
T ss_dssp CBTTTCCC---------SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTT-TTS
T ss_pred cCccCCCC---------CceeECCCCCchhccccCCCCcccCCCCCCCCc-Ccc
Confidence 48889864 468999999999999999998877889999997 554
No 58
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=97.88 E-value=2.9e-06 Score=75.50 Aligned_cols=47 Identities=30% Similarity=0.600 Sum_probs=36.7
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
|.+|+.... .+...|+.|+.|+++||..|+.++. .|.|.|||+ .|..
T Consensus 28 C~vC~~~~s----~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~-~C~~ 74 (88)
T 2l43_A 28 CSICMDGES----QNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCR-HCLQ 74 (88)
T ss_dssp CSSCCSSSS----CSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCH-HHHH
T ss_pred CCcCCCCCC----CCCCCEEECCCCCchhhcccCCCCc--cCCCceECc-cccC
Confidence 778886521 1235799999999999999999873 568999997 6654
No 59
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=6.5e-06 Score=70.62 Aligned_cols=45 Identities=38% Similarity=1.017 Sum_probs=37.3
Q ss_pred ccccccccc--CCceeecCCC--C-CcccccccccCCCCCCCccccccccc
Q 003031 741 DDSCGICGD--GGELICCDNC--P-SAFHQACLSIQDLPTGSWFCSNCTCW 786 (855)
Q Consensus 741 dD~C~VCgd--GGeLLcCD~C--P-raFHlsCLgp~~vPeG~W~Cp~C~C~ 786 (855)
..+|. |+. .|+||.||.| | ..||..|+++...|.+.|+|+.|.-.
T Consensus 6 ~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 6 SGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCcc
Confidence 45664 875 6799999995 3 79999999998899999999999743
No 60
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.63 E-value=9.9e-06 Score=74.02 Aligned_cols=85 Identities=19% Similarity=0.511 Sum_probs=53.7
Q ss_pred ccccccccCCceeecCCCCCcccccccccCCCCCCCcccccccc--------------cccCCCCCCC-ccCCCcCcccc
Q 003031 742 DSCGICGDGGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTC--------------WICGDLVNDK-EASSSFDALKC 806 (855)
Q Consensus 742 D~C~VCgdGGeLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~C--------------~ICge~~~D~-e~~s~~~LL~C 806 (855)
.+|.+|+... |+.|...||..|++.+ .|.|..|.. ..|..-.... .......|+.|
T Consensus 8 ~~C~~C~~~~----C~~C~~c~~~~~~~~~-----~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m~~C 78 (117)
T 4bbq_A 8 RKCKACVQGE----CGVCHYCRDMKKFGGP-----GRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMEC 78 (117)
T ss_dssp SCSHHHHSCC----CSCSHHHHHSGGGTSC-----CCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSCEEE
T ss_pred CcCcCcCCcC----CCCCCCCcCCcccCCC-----CccccchhheeeccccccccccccccCcccccccccccCcceEEe
Confidence 4577777653 9999999999998753 255555542 1221110000 11123458899
Q ss_pred cccchhchhhhccCCcCCC----CCCceeeCCc
Q 003031 807 SQCEHKYHGECLKDMSKGA----VSEAWFCNQS 835 (855)
Q Consensus 807 dqCeraYHv~CL~p~~~~~----p~G~WFCs~~ 835 (855)
++|+++||..|+....... ..+.|+|+.+
T Consensus 79 ~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C 111 (117)
T 4bbq_A 79 CICNEIVHPGCLQMDGEGLLNEELPNCWECPKC 111 (117)
T ss_dssp TTTCCEECGGGCCSCCCCEECSSSSSEEECTTT
T ss_pred eecCCeEECCCCCCCccccccccCCCCeECCCC
Confidence 9999999999998764322 2456999854
No 61
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.56 E-value=3.3e-05 Score=64.11 Aligned_cols=46 Identities=33% Similarity=0.865 Sum_probs=37.7
Q ss_pred ccccccccccc----CCceeecCCCCCcccccccccCCCC---CCCccccccc
Q 003031 739 KNDDSCGICGD----GGELICCDNCPSAFHQACLSIQDLP---TGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgd----GGeLLcCD~CPraFHlsCLgp~~vP---eG~W~Cp~C~ 784 (855)
.+..+|.+|+. ++.+|.||.|...||..|+++...+ ...|+|+.|.
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 56 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCS 56 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHH
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCc
Confidence 45577999985 5679999999999999999985443 3689999986
No 62
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.52 E-value=1e-05 Score=78.46 Aligned_cols=45 Identities=27% Similarity=0.697 Sum_probs=36.4
Q ss_pred ccccccccccc----CCceeecCCCCCcccccccccCCC---CCCCccccccc
Q 003031 739 KNDDSCGICGD----GGELICCDNCPSAFHQACLSIQDL---PTGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgd----GGeLLcCD~CPraFHlsCLgp~~v---PeG~W~Cp~C~ 784 (855)
.+..+| +|+. +|.+++||.|+.+||..|+++... ..+.|+|+.|.
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~ 57 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 57 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCc
Confidence 455778 9986 356999999999999999997432 36789999997
No 63
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.44 E-value=3e-05 Score=66.56 Aligned_cols=47 Identities=38% Similarity=0.902 Sum_probs=37.4
Q ss_pred ccccccccccccc---CCceeecCCCCCcccccccccCCC-------CCCCccccccc
Q 003031 737 DDKNDDSCGICGD---GGELICCDNCPSAFHQACLSIQDL-------PTGSWFCSNCT 784 (855)
Q Consensus 737 ed~ndD~C~VCgd---GGeLLcCD~CPraFHlsCLgp~~v-------PeG~W~Cp~C~ 784 (855)
.+.+..+| +|+. ++.+|.||.|...||..|+++... ....|+|+.|.
T Consensus 12 ~d~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~ 68 (76)
T 1wem_A 12 YDPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68 (76)
T ss_dssp CCTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHH
T ss_pred cCCCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCc
Confidence 44556678 7987 468999999999999999998533 24689999886
No 64
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.34 E-value=3.4e-05 Score=74.54 Aligned_cols=41 Identities=17% Similarity=0.591 Sum_probs=34.3
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCC-------CCCCceeeCC
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKG-------AVSEAWFCNQ 834 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~-------~p~G~WFCs~ 834 (855)
|.+|+.. +.++.|+.|++.||..|+.++... .+.+.|+|+.
T Consensus 66 C~vC~~G---------G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~ 113 (142)
T 2lbm_A 66 CRWCAEG---------GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYI 113 (142)
T ss_dssp CSSSCCC---------SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTT
T ss_pred ecccCCC---------CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeec
Confidence 8888864 679999999999999999987541 3689999984
No 65
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.33 E-value=0.0001 Score=63.84 Aligned_cols=44 Identities=30% Similarity=0.837 Sum_probs=36.0
Q ss_pred cccccccccc---CCceeecC--CCCCcccccccccCCCC-------CCCccccccc
Q 003031 740 NDDSCGICGD---GGELICCD--NCPSAFHQACLSIQDLP-------TGSWFCSNCT 784 (855)
Q Consensus 740 ndD~C~VCgd---GGeLLcCD--~CPraFHlsCLgp~~vP-------eG~W~Cp~C~ 784 (855)
...+| +|+. .|.||.|| .|...||..|+++...+ ...|+|+.|.
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCC
Confidence 44567 7986 58999999 99999999999986544 3589999886
No 66
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.33 E-value=4.7e-05 Score=69.71 Aligned_cols=44 Identities=27% Similarity=0.819 Sum_probs=37.1
Q ss_pred ccccccccC----CceeecC-CCCCcccccccccCC--------CCCCCcccccccc
Q 003031 742 DSCGICGDG----GELICCD-NCPSAFHQACLSIQD--------LPTGSWFCSNCTC 785 (855)
Q Consensus 742 D~C~VCgdG----GeLLcCD-~CPraFHlsCLgp~~--------vPeG~W~Cp~C~C 785 (855)
..|.+|+.. ++++.|| .|...||..|+++.. .|.+.|+|+.|.-
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~ 60 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLK 60 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHH
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccC
Confidence 569999874 6899998 999999999999853 4678999999973
No 67
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.33 E-value=9.5e-05 Score=66.80 Aligned_cols=35 Identities=20% Similarity=0.506 Sum_probs=29.0
Q ss_pred cCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 801 FDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 801 ~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+.|+.|+.|+++||..|+.++....+ +.|||+ .|.
T Consensus 40 ~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~-~C~ 74 (98)
T 2lv9_A 40 GYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCE-RCQ 74 (98)
T ss_dssp SCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCT-TTS
T ss_pred CcEEEcCCCCCcCcCcCCCCCccCCC-CCEECC-CCc
Confidence 57899999999999999998755444 589998 664
No 68
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.26 E-value=9.3e-05 Score=66.60 Aligned_cols=39 Identities=23% Similarity=0.604 Sum_probs=31.2
Q ss_pred cCcccccccc---hhchhhhccCCcCCCCCCceeeCCccHHHHh
Q 003031 801 FDALKCSQCE---HKYHGECLKDMSKGAVSEAWFCNQSCQEVGN 841 (855)
Q Consensus 801 ~~LL~CdqCe---raYHv~CL~p~~~~~p~G~WFCs~~CkeI~~ 841 (855)
+.|+.||.|+ .+||..|+... ..+.+.|||+.+|.++-.
T Consensus 37 g~MI~CD~c~C~~eWfH~~CVgl~--~~p~~~W~Cp~cC~~~~k 78 (90)
T 2jmi_A 37 GPMVACDNPACPFEWFHYGCVGLK--QAPKGKWYCSKDCKEIAN 78 (90)
T ss_dssp SSEECCCSSSCSCSCEETTTSSCS--SCTTSCCCSSHHHHHHHH
T ss_pred CCEEEecCCCCccccCcCccCCCC--cCCCCCccCChhhcchhh
Confidence 3589999976 89999999864 445789999965987654
No 69
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.21 E-value=5.6e-05 Score=64.02 Aligned_cols=46 Identities=28% Similarity=0.829 Sum_probs=36.5
Q ss_pred cccccccccccC----CceeecC-CCCCcccccccccCC--------CCCCCccccccc
Q 003031 739 KNDDSCGICGDG----GELICCD-NCPSAFHQACLSIQD--------LPTGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgdG----GeLLcCD-~CPraFHlsCLgp~~--------vPeG~W~Cp~C~ 784 (855)
+....|.+|+.+ ..+|.|| .|...||..|+++.. .|.+.|+|+.|.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 345679999973 4699999 999999999999843 477899999984
No 70
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.20 E-value=0.00017 Score=61.48 Aligned_cols=45 Identities=24% Similarity=0.691 Sum_probs=35.3
Q ss_pred ccccccccccc---CCceeecCCCCCcccccccccCC-CCCCCccccccc
Q 003031 739 KNDDSCGICGD---GGELICCDNCPSAFHQACLSIQD-LPTGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgd---GGeLLcCD~CPraFHlsCLgp~~-vPeG~W~Cp~C~ 784 (855)
.+..+| +|+. ++.+|.||.|...||..|+++.. ...+.|+|+.|.
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCC
Confidence 344567 8886 45699999999999999999843 224689999885
No 71
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.15 E-value=0.00013 Score=67.51 Aligned_cols=32 Identities=25% Similarity=0.566 Sum_probs=27.8
Q ss_pred cCccccc--ccchhchhhhccCCcCCCCCCceeeCC
Q 003031 801 FDALKCS--QCEHKYHGECLKDMSKGAVSEAWFCNQ 834 (855)
Q Consensus 801 ~~LL~Cd--qCeraYHv~CL~p~~~~~p~G~WFCs~ 834 (855)
+.|+.|+ .|+++||..|+. +...|.|.||||.
T Consensus 25 G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~ 58 (107)
T 4gne_A 25 GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPW 58 (107)
T ss_dssp SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGG
T ss_pred CcEeEECCCCCCcccccccCc--CCcCCCCCEECCC
Confidence 5689999 899999999998 3466799999985
No 72
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.14 E-value=0.00026 Score=60.32 Aligned_cols=45 Identities=27% Similarity=0.787 Sum_probs=35.2
Q ss_pred cccccccccccC---C-ceeecCCCCCcccccccccCC--CCCCCccccccc
Q 003031 739 KNDDSCGICGDG---G-ELICCDNCPSAFHQACLSIQD--LPTGSWFCSNCT 784 (855)
Q Consensus 739 ~ndD~C~VCgdG---G-eLLcCD~CPraFHlsCLgp~~--vPeG~W~Cp~C~ 784 (855)
....+| +|+.. | .+|.||.|...||..|+++.. .....|+|+.|.
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~ 64 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCI 64 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHH
T ss_pred CcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCcc
Confidence 344668 69852 4 699999999999999999853 234789999986
No 73
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.11 E-value=0.00019 Score=64.32 Aligned_cols=47 Identities=30% Similarity=0.774 Sum_probs=38.9
Q ss_pred ccccccccccc--cCCceeecCCCCCccccccccc--------------CCCCCCCccccccc
Q 003031 738 DKNDDSCGICG--DGGELICCDNCPSAFHQACLSI--------------QDLPTGSWFCSNCT 784 (855)
Q Consensus 738 d~ndD~C~VCg--dGGeLLcCD~CPraFHlsCLgp--------------~~vPeG~W~Cp~C~ 784 (855)
..+|+.|.||. ..++++.|..|++.||..||.. ...+...|.|+.|.
T Consensus 12 ~~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 12 VVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred CCCCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 35889999999 5889999999999999999974 12245679999984
No 74
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=96.95 E-value=0.00016 Score=60.07 Aligned_cols=34 Identities=24% Similarity=0.705 Sum_probs=27.4
Q ss_pred cCcccccc--cc-hhchhhhccCCcCCCCCCceeeCCccH
Q 003031 801 FDALKCSQ--CE-HKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 801 ~~LL~Cdq--Ce-raYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+.|+.|+. |+ .+||..|+... ..+.+.|||+ .|.
T Consensus 21 g~mi~CD~cdC~~~wfH~~Cvgl~--~~p~g~w~C~-~C~ 57 (60)
T 2vnf_A 21 GEMIGCDNPDCSIEWFHFACVGLT--TKPRGKWFCP-RCS 57 (60)
T ss_dssp SEEEECSCTTCSSCEEETGGGTCS--SCCSSCCCCH-HHH
T ss_pred CCEEEeCCCCCCCceEehhcCCCC--cCCCCCEECc-Ccc
Confidence 56899999 66 79999999953 4557999998 564
No 75
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=96.94 E-value=0.00034 Score=60.10 Aligned_cols=34 Identities=24% Similarity=0.705 Sum_probs=27.5
Q ss_pred cCcccccc--cc-hhchhhhccCCcCCCCCCceeeCCccH
Q 003031 801 FDALKCSQ--CE-HKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 801 ~~LL~Cdq--Ce-raYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+.|+.|+. |+ .+||..|+... ..+.+.|||+ .|.
T Consensus 27 g~MI~CD~~~C~~~wfH~~Cvgl~--~~p~g~w~Cp-~C~ 63 (71)
T 1wen_A 27 GEMIGCDNPDCSIEWFHFACVGLT--TKPRGKWFCP-RCS 63 (71)
T ss_dssp SSEECCSCSSCSCCCEETTTTTCS--SCCSSCCCCT-TTS
T ss_pred CCEeEeeCCCCCCccEecccCCcC--cCCCCCEECC-CCC
Confidence 46899999 87 69999999954 4457999998 564
No 76
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=96.85 E-value=0.00022 Score=59.25 Aligned_cols=34 Identities=24% Similarity=0.700 Sum_probs=27.5
Q ss_pred cCcccccc--cc-hhchhhhccCCcCCCCCCceeeCCccH
Q 003031 801 FDALKCSQ--CE-HKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 801 ~~LL~Cdq--Ce-raYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+.|+.||. |+ .+||..|+... ..+.+.|||+ .|.
T Consensus 20 g~mi~CD~~~C~~~wfH~~Cvgl~--~~p~~~w~Cp-~C~ 56 (59)
T 3c6w_A 20 GEMIGCDNPDCPIEWFHFACVDLT--TKPKGKWFCP-RCV 56 (59)
T ss_dssp SEEEECSCTTCSSCEEETGGGTCS--SCCSSCCCCH-HHH
T ss_pred CCeeEeeCCCCCCCCEecccCCcc--cCCCCCEECc-Ccc
Confidence 46899999 77 69999999964 4456899998 664
No 77
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.85 E-value=0.00019 Score=62.18 Aligned_cols=43 Identities=26% Similarity=0.733 Sum_probs=34.1
Q ss_pred ccccccccc----CCceeecCCCCCcccccccccCCCC---CCCccccccc
Q 003031 741 DDSCGICGD----GGELICCDNCPSAFHQACLSIQDLP---TGSWFCSNCT 784 (855)
Q Consensus 741 dD~C~VCgd----GGeLLcCD~CPraFHlsCLgp~~vP---eG~W~Cp~C~ 784 (855)
..+| +|+. ++.+|.||.|...||..|+++...+ ...|+|+.|.
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 61 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCE 61 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTT
T ss_pred ccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcc
Confidence 3456 7875 5689999999999999999974322 3689999886
No 78
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.80 E-value=0.00063 Score=57.52 Aligned_cols=42 Identities=31% Similarity=0.831 Sum_probs=32.8
Q ss_pred cccccccc---CCceeecCC--CCCcccccccccCCCCC------CCccccccc
Q 003031 742 DSCGICGD---GGELICCDN--CPSAFHQACLSIQDLPT------GSWFCSNCT 784 (855)
Q Consensus 742 D~C~VCgd---GGeLLcCD~--CPraFHlsCLgp~~vPe------G~W~Cp~C~ 784 (855)
..| +|+. .|.||.||. |...||..|+++...+. ..|+|+.|+
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 456 6864 678999995 99999999999744332 369999986
No 79
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=96.80 E-value=0.00025 Score=64.98 Aligned_cols=53 Identities=30% Similarity=0.669 Sum_probs=38.4
Q ss_pred cccccccCCCCCCCccCCCcCccccc-ccchhchhhhccCCcC------CCCCCceeeCCccHHHH
Q 003031 782 NCTCWICGDLVNDKEASSSFDALKCS-QCEHKYHGECLKDMSK------GAVSEAWFCNQSCQEVG 840 (855)
Q Consensus 782 ~C~C~ICge~~~D~e~~s~~~LL~Cd-qCeraYHv~CL~p~~~------~~p~G~WFCs~~CkeI~ 840 (855)
.+.|.+|+++..+ .+.++.|+ .|+.+||..|+..... ..+.+.|+|+ .|....
T Consensus 3 ~~~C~iC~~p~~~-----~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp-~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVND-----DQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACD-LCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCT-----TSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCH-HHHHTT
T ss_pred cCCCCCCCCccCC-----CCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECc-cccCcC
Confidence 3557888887432 24588998 9999999999987642 1345899998 666543
No 80
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.79 E-value=0.00027 Score=57.00 Aligned_cols=42 Identities=26% Similarity=0.699 Sum_probs=32.4
Q ss_pred ccccccc----CCceeecC-CCCCcccccccccCCCC--CCCccccccc
Q 003031 743 SCGICGD----GGELICCD-NCPSAFHQACLSIQDLP--TGSWFCSNCT 784 (855)
Q Consensus 743 ~C~VCgd----GGeLLcCD-~CPraFHlsCLgp~~vP--eG~W~Cp~C~ 784 (855)
.|.+|+. ++.+|.|| .|...||..|+++...+ .+.|+|+.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 3666765 45699999 89999999999984332 3789999985
No 81
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.78 E-value=0.00018 Score=60.94 Aligned_cols=49 Identities=33% Similarity=0.758 Sum_probs=36.3
Q ss_pred ccccccCCCCCCCccCCCcCccccc-ccchhchhhhccCCcC------CCCCCceeeCCccH
Q 003031 783 CTCWICGDLVNDKEASSSFDALKCS-QCEHKYHGECLKDMSK------GAVSEAWFCNQSCQ 837 (855)
Q Consensus 783 C~C~ICge~~~D~e~~s~~~LL~Cd-qCeraYHv~CL~p~~~------~~p~G~WFCs~~Ck 837 (855)
+.|.+|+++..+ +..++.|+ .|.++||..|+..... ..+.+.|+|+ .|.
T Consensus 9 ~~C~~C~~p~~~-----~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~-~C~ 64 (65)
T 2vpb_A 9 YPCGICTNEVND-----DQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCD-TCM 64 (65)
T ss_dssp CBCTTTCSBCCT-----TSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCH-HHH
T ss_pred CcCccCCCccCC-----CCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECc-Ccc
Confidence 347788887432 25689999 9999999999988642 1356799997 664
No 82
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.76 E-value=0.00017 Score=58.12 Aligned_cols=49 Identities=24% Similarity=0.613 Sum_probs=36.6
Q ss_pred cccccccCCCCCCCccCCCcCccccc-ccchhchhhhccCCcCCCCCCceeeCCcc
Q 003031 782 NCTCWICGDLVNDKEASSSFDALKCS-QCEHKYHGECLKDMSKGAVSEAWFCNQSC 836 (855)
Q Consensus 782 ~C~C~ICge~~~D~e~~s~~~LL~Cd-qCeraYHv~CL~p~~~~~p~G~WFCs~~C 836 (855)
.|.|.+|+++..+ +..++.|+ .|+.+||..|+...........|+|+ .|
T Consensus 2 ~c~cc~C~~p~~~-----~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~-~C 51 (52)
T 2kgg_A 2 VCAAQNCQRPCKD-----KVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICI-NC 51 (52)
T ss_dssp CCSCTTCCCCCCT-----TCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCS-CC
T ss_pred cccCCCCcCccCC-----CCcEEEeCCCCCccCcccccCCCccccCCCCEECC-CC
Confidence 4778889987422 35689999 89999999999876432224889997 55
No 83
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.76 E-value=0.00058 Score=61.60 Aligned_cols=34 Identities=24% Similarity=0.705 Sum_probs=27.4
Q ss_pred cCcccccc--cc-hhchhhhccCCcCCCCCCceeeCCccH
Q 003031 801 FDALKCSQ--CE-HKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 801 ~~LL~Cdq--Ce-raYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+.|+.|+. |+ .+||..|+... ..+.+.|||+ .|.
T Consensus 47 g~MI~CD~~dC~~~WfH~~CVgl~--~~p~g~W~Cp-~C~ 83 (91)
T 1weu_A 47 GEMIGCDNPDCSIEWFHFACVGLT--TKPRGKWFCP-RCS 83 (91)
T ss_dssp SCCCCCSCSSCSCCCCCSTTTTCS--SCCCSSCCCT-TTC
T ss_pred CCEeEecCCCCCCCCEecccCCcC--cCCCCCEECc-Ccc
Confidence 46899999 77 79999999964 4457899998 564
No 84
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.74 E-value=0.00041 Score=57.53 Aligned_cols=48 Identities=29% Similarity=0.627 Sum_probs=34.5
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCC-CCceeeCCccHH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAV-SEAWFCNQSCQE 838 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p-~G~WFCs~~Cke 838 (855)
|.+|+++.. .+..++.|+.|+.+||..|+........ ...|+|+ .|..
T Consensus 9 C~~C~~~~~-----~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~-~C~~ 57 (64)
T 1we9_A 9 CGACGESYA-----ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCP-SCSN 57 (64)
T ss_dssp CSSSCCCCC-----SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCH-HHHT
T ss_pred CCCCCCccC-----CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECC-CCcC
Confidence 346777521 1356899999999999999988644332 5799997 6654
No 85
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.63 E-value=0.00072 Score=57.60 Aligned_cols=46 Identities=24% Similarity=0.505 Sum_probs=34.0
Q ss_pred ccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 787 ICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
+|+++. ..+..|+.|+.|..+||..|+...........|+|+ .|..
T Consensus 20 ~C~~~~-----~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~-~C~~ 65 (72)
T 1wee_A 20 KCGTKD-----DDGERMLACDGCGVWHHTRCIGINNADALPSKFLCF-RCIE 65 (72)
T ss_dssp TTCCCS-----CCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCH-HHHH
T ss_pred eCCCcc-----CCCCcEEECCCCCCccCCeeeccCccccCCCcEECC-CccC
Confidence 477752 122458999999999999999987543446899997 6654
No 86
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.61 E-value=0.00064 Score=57.92 Aligned_cols=43 Identities=23% Similarity=0.594 Sum_probs=32.8
Q ss_pred ccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 787 ICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+|+++. .+..|+.|+.|+.+||..|+...... ..+.|+|+ .|.
T Consensus 23 iC~~~~------~~~~MIqCd~C~~WfH~~Cvgi~~~~-~~~~~~C~-~C~ 65 (68)
T 3o70_A 23 FCMKPF------AGRPMIECNECHTWIHLSCAKIRKSN-VPEVFVCQ-KCR 65 (68)
T ss_dssp TTCCCC------TTCCEEECTTTCCEEETTTTTCCTTS-CCSSCCCH-HHH
T ss_pred ECCCcC------CCCCEEECCCCCccccccccCcCccc-CCCcEECC-CCC
Confidence 677652 23568999999999999999987543 35799997 664
No 87
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=96.61 E-value=0.00045 Score=57.95 Aligned_cols=34 Identities=21% Similarity=0.684 Sum_probs=27.5
Q ss_pred cCcccccc--cc-hhchhhhccCCcCCCCCCceeeCCccH
Q 003031 801 FDALKCSQ--CE-HKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 801 ~~LL~Cdq--Ce-raYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+.|+.|+. |+ ++||..|+... ..+.+.|||| .|.
T Consensus 22 g~MI~CD~c~C~~~WfH~~Cvgl~--~~p~~~w~Cp-~C~ 58 (62)
T 2g6q_A 22 GEMIGCDNEQCPIEWFHFSCVSLT--YKPKGKWYCP-KCR 58 (62)
T ss_dssp SEEEECSCTTCSSCEEETGGGTCS--SCCSSCCCCH-HHH
T ss_pred CCeeeeeCCCCCcccEecccCCcC--cCCCCCEECc-Ccc
Confidence 46899999 55 99999999975 3457999998 564
No 88
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.47 E-value=0.00017 Score=68.76 Aligned_cols=42 Identities=17% Similarity=0.577 Sum_probs=33.3
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcC-----C--CCCCceeeCCc
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSK-----G--AVSEAWFCNQS 835 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~-----~--~p~G~WFCs~~ 835 (855)
|.+|+.. +.++.|+.|+++||..|+.++.. . .+.+.|+|..+
T Consensus 60 C~vC~dG---------G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C 108 (129)
T 3ql9_A 60 CRWCAEG---------GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYIC 108 (129)
T ss_dssp CTTTCCC---------SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTT
T ss_pred CeecCCC---------CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCc
Confidence 7788863 67899999999999999997631 1 25899999853
No 89
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.36 E-value=0.001 Score=57.14 Aligned_cols=39 Identities=28% Similarity=0.787 Sum_probs=32.1
Q ss_pred cccc----CCceeecCCCCCcccccccccCCCCC---CCccccccc
Q 003031 746 ICGD----GGELICCDNCPSAFHQACLSIQDLPT---GSWFCSNCT 784 (855)
Q Consensus 746 VCgd----GGeLLcCD~CPraFHlsCLgp~~vPe---G~W~Cp~C~ 784 (855)
+|+. ++.+|.||.|...||..|+++...+. ..|+|+.|.
T Consensus 14 iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~ 59 (75)
T 3kqi_A 14 VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCE 59 (75)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHH
T ss_pred ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCc
Confidence 6775 45899999999999999999855442 579999886
No 90
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=96.32 E-value=0.00045 Score=66.90 Aligned_cols=39 Identities=23% Similarity=0.675 Sum_probs=30.3
Q ss_pred cCcccccccchhchhhhccCCcCC-CCCCceeeCCccHHHH
Q 003031 801 FDALKCSQCEHKYHGECLKDMSKG-AVSEAWFCNQSCQEVG 840 (855)
Q Consensus 801 ~~LL~CdqCeraYHv~CL~p~~~~-~p~G~WFCs~~CkeI~ 840 (855)
+.++.|+.|+++||..|+...... ...+.|+|+ .|...-
T Consensus 21 ~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~-~C~~~~ 60 (174)
T 2ri7_A 21 KFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCP-QCQSTE 60 (174)
T ss_dssp SCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCH-HHHHHH
T ss_pred CCEeECCCCCchhChhhcCCchhhccCccCeecC-CCcchh
Confidence 568999999999999999865332 236899997 776543
No 91
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.17 E-value=0.0019 Score=51.99 Aligned_cols=35 Identities=26% Similarity=0.730 Sum_probs=29.2
Q ss_pred CCceeecCCCCCcccccccccCCC-CCCCccccccc
Q 003031 750 GGELICCDNCPSAFHQACLSIQDL-PTGSWFCSNCT 784 (855)
Q Consensus 750 GGeLLcCD~CPraFHlsCLgp~~v-PeG~W~Cp~C~ 784 (855)
++.+|.||.|...||..|+++... ..+.|+|+.|.
T Consensus 15 ~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~ 50 (52)
T 3o7a_A 15 GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 50 (52)
T ss_dssp TCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHH
T ss_pred CCCEEEcCCCCccccccccCCCcccCCCcEECcCCC
Confidence 569999999999999999998432 24689999885
No 92
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.13 E-value=0.0014 Score=52.65 Aligned_cols=36 Identities=25% Similarity=0.632 Sum_probs=29.2
Q ss_pred CcCcccccccchhchhhhccCCcCCCCCCceeeCCccH
Q 003031 800 SFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQ 837 (855)
Q Consensus 800 ~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Ck 837 (855)
+..|+.|+.|+.+||..|+...... ..+.|+|+ .|.
T Consensus 15 ~~~MI~Cd~C~~W~H~~Cvgi~~~~-~~~~~~C~-~C~ 50 (52)
T 3o7a_A 15 GRPMIECNECHTWIHLSCAKIRKSN-VPEVFVCQ-KCR 50 (52)
T ss_dssp TCCEEECTTTCCEEETTTTTCCGGG-CCSSCCCH-HHH
T ss_pred CCCEEEcCCCCccccccccCCCccc-CCCcEECc-CCC
Confidence 4678999999999999999986542 25799997 665
No 93
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.00 E-value=0.0024 Score=55.31 Aligned_cols=45 Identities=22% Similarity=0.622 Sum_probs=33.8
Q ss_pred ccCCCCCCCccCCCcCccccc--ccchhchhhhccCCcCC-----CCCCceeeCCccHH
Q 003031 787 ICGDLVNDKEASSSFDALKCS--QCEHKYHGECLKDMSKG-----AVSEAWFCNQSCQE 838 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~Cd--qCeraYHv~CL~p~~~~-----~p~G~WFCs~~Cke 838 (855)
+|+.. .+.+.|+.|+ .|..+||..|+.-.... .....|||+ .|..
T Consensus 20 iC~~~------~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~-~C~~ 71 (78)
T 1wew_A 20 VCGNS------LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCE-ICRL 71 (78)
T ss_dssp SSCCC------CCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCH-HHHH
T ss_pred ECCCc------CCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECC-CCCc
Confidence 57775 1235799999 99999999999876443 236899997 6754
No 94
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.88 E-value=0.00097 Score=57.17 Aligned_cols=46 Identities=24% Similarity=0.619 Sum_probs=33.4
Q ss_pred ccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCC-----CCCceeeCCccHHH
Q 003031 787 ICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGA-----VSEAWFCNQSCQEV 839 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~-----p~G~WFCs~~CkeI 839 (855)
+|+++. .+..|+.|+.|+.+||..|+....... ....|+|+ .|...
T Consensus 20 ~C~~~~------~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~-~C~~~ 70 (76)
T 1wem_A 20 ICRQPH------NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP-NCTIL 70 (76)
T ss_dssp TTCCCC------CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCH-HHHHH
T ss_pred ECCCcc------CCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECc-CCcCc
Confidence 577752 235689999999999999998763321 25789997 66543
No 95
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.73 E-value=0.0019 Score=55.98 Aligned_cols=47 Identities=26% Similarity=0.690 Sum_probs=33.9
Q ss_pred ccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCC-CCceeeCCccHHH
Q 003031 787 ICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAV-SEAWFCNQSCQEV 839 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p-~G~WFCs~~CkeI 839 (855)
+|+++.. ....|+.|+.|+.+||..|+........ ...|+|+ .|...
T Consensus 16 ~C~~~~d-----~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~-~C~~~ 63 (79)
T 1wep_A 16 LCRQPYN-----VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCP-DCEAV 63 (79)
T ss_dssp TTSCSCC-----SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCT-TTTTT
T ss_pred EcCCccC-----CCCceEEcCCCCCcEEeeecCcccccccCCCeEECC-Ccccc
Confidence 6777521 1367899999999999999987643222 4799997 66543
No 96
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.72 E-value=0.0017 Score=73.14 Aligned_cols=43 Identities=28% Similarity=0.796 Sum_probs=34.9
Q ss_pred ccccccccc----CCceeecCCCCCcccccccccCCCCC---CCccccccc
Q 003031 741 DDSCGICGD----GGELICCDNCPSAFHQACLSIQDLPT---GSWFCSNCT 784 (855)
Q Consensus 741 dD~C~VCgd----GGeLLcCD~CPraFHlsCLgp~~vPe---G~W~Cp~C~ 784 (855)
..+| +|+. ++.+|.||.|...||..|+++...+. +.|+|+.|.
T Consensus 37 ~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 86 (488)
T 3kv5_D 37 PVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86 (488)
T ss_dssp CEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHH
T ss_pred CeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCc
Confidence 3456 7875 57899999999999999999855442 579999997
No 97
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.67 E-value=0.0042 Score=53.22 Aligned_cols=39 Identities=18% Similarity=0.537 Sum_probs=30.4
Q ss_pred cCcccccccc---hhchhhhccCCcCCCCCCceeeCCccHHHHhh
Q 003031 801 FDALKCSQCE---HKYHGECLKDMSKGAVSEAWFCNQSCQEVGNK 842 (855)
Q Consensus 801 ~~LL~CdqCe---raYHv~CL~p~~~~~p~G~WFCs~~CkeI~~~ 842 (855)
+.|+.||.|+ .+||..|+.... .+.+.|||+ .|.....+
T Consensus 17 g~MI~CD~cdC~~~WfH~~Cvgl~~--~p~~~w~Cp-~C~~~~~k 58 (70)
T 1x4i_A 17 GEMVGCDNQDCPIEWFHYGCVGLTE--APKGKWYCP-QCTAAMKR 58 (70)
T ss_dssp SSEECCSCTTCSCCCEEHHHHTCSS--CCSSCCCCH-HHHHHHHH
T ss_pred CCEeEeCCCCCCccCCcccccccCc--CCCCCEECC-CCCccccc
Confidence 4689999975 899999999753 457999998 77655443
No 98
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.60 E-value=0.0033 Score=56.40 Aligned_cols=51 Identities=24% Similarity=0.682 Sum_probs=37.7
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCc------------CCCCCCceeeCCccHHHHhhh
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMS------------KGAVSEAWFCNQSCQEVGNKL 843 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~------------~~~p~G~WFCs~~CkeI~~~L 843 (855)
|.+|.... ...++.|..|.|.||..||+... .......|.|+ +|.++..-|
T Consensus 18 C~VC~~~t-------~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~-~CenL~lLL 80 (89)
T 1wil_A 18 CDVCEVWT-------AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCH-YCDNINLLL 80 (89)
T ss_dssp CTTTCCCC-------SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCT-TTCCCCSSS
T ss_pred cCcccccc-------ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCcccc-ccchhhhhc
Confidence 77888641 35688999999999999998751 11138899997 887765544
No 99
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=95.56 E-value=0.003 Score=54.28 Aligned_cols=40 Identities=20% Similarity=0.613 Sum_probs=31.3
Q ss_pred CcCcccccccchhchhhhccCCcCCCC-CCceeeCCccHHHH
Q 003031 800 SFDALKCSQCEHKYHGECLKDMSKGAV-SEAWFCNQSCQEVG 840 (855)
Q Consensus 800 ~~~LL~CdqCeraYHv~CL~p~~~~~p-~G~WFCs~~CkeI~ 840 (855)
+..|+.|+.|+.+||..|+.......+ .+.|+|+ .|....
T Consensus 22 ~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~-~C~~~~ 62 (75)
T 3kqi_A 22 TRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCP-NCEKTH 62 (75)
T ss_dssp TSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCH-HHHHHH
T ss_pred CCCEEEcCCCCCCEecccccccccccCCCCEEECC-CCcccC
Confidence 357899999999999999988654333 4789997 777653
No 100
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=95.48 E-value=0.013 Score=51.17 Aligned_cols=51 Identities=25% Similarity=0.260 Sum_probs=40.7
Q ss_pred cCceeccccCCCc---cccceeeeCCCccccccchhHHHHhcccccccCCCCCC
Q 003031 291 AGWAVERRKRPSR---KYMDTIYRSPEGRLFREFPKVWRVCGENLLADGSNVVP 341 (855)
Q Consensus 291 AgW~i~~rkR~~r---~~~~~~y~sP~~~~~r~~~~aWk~cG~~L~~~~~~~~~ 341 (855)
.||+-+-+.|.+- -++|.||.||.|+.||+..++=|++|..|-.+.-+|..
T Consensus 13 ~GW~Re~~~R~~g~s~gk~DvyY~sP~Gkk~RS~~ev~ryL~~~~~~~~FdF~~ 66 (75)
T 1d9n_A 13 PGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66 (75)
T ss_dssp SSCEEEECSSSSSCTTCCCCEEEECSSSCEECSTHHHHHHHCTTCCCTTCCTTT
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCCCCeeecHHHHHHHhccCCCccccCCCC
Confidence 6999888777743 68999999999999999999999998755444444433
No 101
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=95.13 E-value=0.0041 Score=62.14 Aligned_cols=44 Identities=30% Similarity=0.815 Sum_probs=34.0
Q ss_pred cccccccc---CC----ceeecCCCCCcccccccccCC--------CCC-CCcccccccc
Q 003031 742 DSCGICGD---GG----ELICCDNCPSAFHQACLSIQD--------LPT-GSWFCSNCTC 785 (855)
Q Consensus 742 D~C~VCgd---GG----eLLcCD~CPraFHlsCLgp~~--------vPe-G~W~Cp~C~C 785 (855)
..|.+|+. .+ .+|.||.|...||..|+++.. .|+ ..|+|+.|.-
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~ 62 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 62 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCC
Confidence 46888875 23 499999999999999999842 232 3799999973
No 102
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=95.11 E-value=0.0084 Score=50.65 Aligned_cols=45 Identities=22% Similarity=0.557 Sum_probs=31.6
Q ss_pred ccCCCCCCCccCCCcCccccc--ccchhchhhhccCCcCCC----CCCceeeCCccHH
Q 003031 787 ICGDLVNDKEASSSFDALKCS--QCEHKYHGECLKDMSKGA----VSEAWFCNQSCQE 838 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~Cd--qCeraYHv~CL~p~~~~~----p~G~WFCs~~Cke 838 (855)
+||.. ...+.|+.|+ +|..+||..|+.-..... ....|||+ .|+.
T Consensus 14 ~C~~~------~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~-~Cr~ 64 (68)
T 2rsd_A 14 ICSST------MVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCE-LCRL 64 (68)
T ss_dssp TTCCC------SCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCH-HHHH
T ss_pred ECCCC------cCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECc-CccC
Confidence 57764 2235689998 699999999997643221 14689997 7764
No 103
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=94.91 E-value=0.016 Score=50.16 Aligned_cols=51 Identities=29% Similarity=0.417 Sum_probs=41.7
Q ss_pred cCceeccccCC---CccccceeeeCCCccccccchhHHHHhcccccccCCCCCC
Q 003031 291 AGWAVERRKRP---SRKYMDTIYRSPEGRLFREFPKVWRVCGENLLADGSNVVP 341 (855)
Q Consensus 291 AgW~i~~rkR~---~r~~~~~~y~sP~~~~~r~~~~aWk~cG~~L~~~~~~~~~ 341 (855)
.||+-+-+.|. +.-++|.||.||.|+.||+..++=++++..|-.+.-+|..
T Consensus 15 ~GW~R~~~~R~~g~s~~k~DvyY~sP~Gkr~RS~~ev~~YL~~~l~~~~FdF~~ 68 (72)
T 2ky8_A 15 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSCFDFRT 68 (72)
T ss_dssp TTCEEEEEECCSSTTTTCEEEEEECTTCCEEESHHHHHHHHTTSSCCTTCBTTT
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCCCCEeEcHHHHHHHHhcCCChhhcCCCC
Confidence 69998888777 3579999999999999999999999999865555544443
No 104
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=94.81 E-value=0.01 Score=67.71 Aligned_cols=35 Identities=26% Similarity=0.749 Sum_probs=29.4
Q ss_pred CCceeecCCCCCcccccccccCCC---CCCCccccccc
Q 003031 750 GGELICCDNCPSAFHQACLSIQDL---PTGSWFCSNCT 784 (855)
Q Consensus 750 GGeLLcCD~CPraFHlsCLgp~~v---PeG~W~Cp~C~ 784 (855)
+..+|.||.|...||..|+++... ..+.|+||.|.
T Consensus 55 ~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~ 92 (528)
T 3pur_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCV 92 (528)
T ss_dssp TTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTH
T ss_pred CCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCc
Confidence 457999999999999999998432 23689999997
No 105
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=94.58 E-value=0.0076 Score=59.39 Aligned_cols=49 Identities=31% Similarity=0.829 Sum_probs=39.4
Q ss_pred CcccccccccccccCCceeecC--CCCCccccccccc--------CCCCCCCccccccc
Q 003031 736 EDDKNDDSCGICGDGGELICCD--NCPSAFHQACLSI--------QDLPTGSWFCSNCT 784 (855)
Q Consensus 736 ~ed~ndD~C~VCgdGGeLLcCD--~CPraFHlsCLgp--------~~vPeG~W~Cp~C~ 784 (855)
++|..+.+|.+|++||+|++|+ .|+++|-..|+.. .......|.|--|.
T Consensus 74 DeDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~ 132 (159)
T 3a1b_A 74 DDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCG 132 (159)
T ss_dssp CTTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTC
T ss_pred CCCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecC
Confidence 3455678999999999999999 7999999999873 12446789976665
No 106
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=94.11 E-value=0.0065 Score=60.73 Aligned_cols=50 Identities=22% Similarity=0.567 Sum_probs=34.5
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCcCC------CC-CCceeeCCccH
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKG------AV-SEAWFCNQSCQ 837 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~------~p-~G~WFCs~~Ck 837 (855)
|++|+++..+.+. ...++.|+.|+++||..|+...... .| ...|+|+ .|.
T Consensus 5 CpiC~k~Y~~~~~--~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp-~C~ 61 (183)
T 3lqh_A 5 CPLCDKCYDDDDY--ESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCV-NCT 61 (183)
T ss_dssp CTTTCCBCTTCCT--TCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCT-TTC
T ss_pred CCCCcCccCCccc--CCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECc-CCC
Confidence 8888886433321 3568999999999999999775310 11 2479998 554
No 107
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.90 E-value=0.018 Score=65.68 Aligned_cols=40 Identities=25% Similarity=0.525 Sum_probs=31.0
Q ss_pred CCcCcccccccchhchhhhccCCcCCC-CCCceeeCCccHHH
Q 003031 799 SSFDALKCSQCEHKYHGECLKDMSKGA-VSEAWFCNQSCQEV 839 (855)
Q Consensus 799 s~~~LL~CdqCeraYHv~CL~p~~~~~-p~G~WFCs~~CkeI 839 (855)
++..++.||.|+.+||..|+.-..... ..+.|+|| .|...
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp-~C~~~ 94 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCP-KCVPH 94 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCT-TTHHH
T ss_pred cCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECc-CCcCC
Confidence 346789999999999999999764432 35899998 46653
No 108
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.58 E-value=0.0073 Score=67.59 Aligned_cols=41 Identities=27% Similarity=0.701 Sum_probs=33.1
Q ss_pred cccccc----CCceeecCCCCCcccccccccCCCC---CCCccccccc
Q 003031 744 CGICGD----GGELICCDNCPSAFHQACLSIQDLP---TGSWFCSNCT 784 (855)
Q Consensus 744 C~VCgd----GGeLLcCD~CPraFHlsCLgp~~vP---eG~W~Cp~C~ 784 (855)
..+|+. +|.+|.||.|...||..|+++...+ .+.|+|+.|.
T Consensus 7 yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~ 54 (447)
T 3kv4_A 7 YCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54 (447)
T ss_dssp ETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHH
T ss_pred EEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCc
Confidence 346765 5789999999999999999984332 3679999997
No 109
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=93.46 E-value=0.03 Score=48.22 Aligned_cols=41 Identities=24% Similarity=0.376 Sum_probs=36.3
Q ss_pred cCceeccccCC---CccccceeeeCCCccccccchhHHHHhccc
Q 003031 291 AGWAVERRKRP---SRKYMDTIYRSPEGRLFREFPKVWRVCGEN 331 (855)
Q Consensus 291 AgW~i~~rkR~---~r~~~~~~y~sP~~~~~r~~~~aWk~cG~~ 331 (855)
.||+-+-+.|. +.-++|.||.||.|+.||+.+++=++++.+
T Consensus 8 ~GW~R~~~~R~~G~s~gk~DvyY~sP~Gkk~RSk~ev~~yL~~~ 51 (69)
T 3vxv_A 8 CGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKN 51 (69)
T ss_dssp TTCEEEEEECCSSTTTTCEEEEEECTTSCEECSHHHHHHHHHHH
T ss_pred CCCEEEEEEeccCCCCCcceEEEEcCCCCEeeCHHHHHHHHHhC
Confidence 69998888886 456889999999999999999999999875
No 110
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.05 E-value=0.015 Score=65.65 Aligned_cols=39 Identities=23% Similarity=0.624 Sum_probs=29.9
Q ss_pred CcCcccccccchhchhhhccCCcCCCC-CCceeeCCccHHH
Q 003031 800 SFDALKCSQCEHKYHGECLKDMSKGAV-SEAWFCNQSCQEV 839 (855)
Q Consensus 800 ~~~LL~CdqCeraYHv~CL~p~~~~~p-~G~WFCs~~CkeI 839 (855)
++.|+.|+.|+.+||..|+.-...... .+.|+|+ .|...
T Consensus 49 ~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~-~C~~~ 88 (488)
T 3kv5_D 49 NRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCP-NCAVL 88 (488)
T ss_dssp TSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCH-HHHHH
T ss_pred CCCeEEccCCCCceeeeecCcCcccccCCCEEECC-CCcCC
Confidence 367899999999999999987643322 4789998 66543
No 111
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=93.00 E-value=0.02 Score=63.22 Aligned_cols=49 Identities=27% Similarity=0.778 Sum_probs=39.5
Q ss_pred CcccccccccccccCCceeecC--CCCCcccccccccC-------C-CCCCCccccccc
Q 003031 736 EDDKNDDSCGICGDGGELICCD--NCPSAFHQACLSIQ-------D-LPTGSWFCSNCT 784 (855)
Q Consensus 736 ~ed~ndD~C~VCgdGGeLLcCD--~CPraFHlsCLgp~-------~-vPeG~W~Cp~C~ 784 (855)
+++..+.+|.+|++||+|++|| .|++.|-..|+..- . .....|.|--|.
T Consensus 88 D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~ 146 (386)
T 2pv0_B 88 DDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCL 146 (386)
T ss_dssp CSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTS
T ss_pred CCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcC
Confidence 3456678999999999999999 89999999998741 1 234689987776
No 112
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=92.19 E-value=0.11 Score=47.65 Aligned_cols=39 Identities=23% Similarity=0.415 Sum_probs=34.5
Q ss_pred cCceeccccCCC---ccccceeeeCCCccccccchhHHHHhc
Q 003031 291 AGWAVERRKRPS---RKYMDTIYRSPEGRLFREFPKVWRVCG 329 (855)
Q Consensus 291 AgW~i~~rkR~~---r~~~~~~y~sP~~~~~r~~~~aWk~cG 329 (855)
.||+-+-..|.+ --++|.||.+|.|+.||+..++=+++.
T Consensus 26 ~GW~re~~~R~~G~s~gk~DvYY~sP~GkkfRSk~ev~ryL~ 67 (97)
T 3c2i_A 26 EGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIMYFE 67 (97)
T ss_dssp TTCEEEEEECCSSTTTTCEEEEEECTTSCEECSHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCCCcceEEEECCCCCEEECHHHHHHHHH
Confidence 699988888874 458999999999999999999999983
No 113
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=90.11 E-value=0.037 Score=62.04 Aligned_cols=46 Identities=20% Similarity=0.567 Sum_probs=32.9
Q ss_pred ccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCC-CCceeeCCccHH
Q 003031 787 ICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAV-SEAWFCNQSCQE 838 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p-~G~WFCs~~Cke 838 (855)
+|+++. ..++.|+.|+.|+.+||..|+.-...... .+.|+|+ .|..
T Consensus 9 iC~~~~-----d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~-~C~~ 55 (447)
T 3kv4_A 9 LCRLPY-----DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCP-NCEV 55 (447)
T ss_dssp TTTEEC-----CTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCH-HHHH
T ss_pred eCCCcC-----CCCCCeEEcCCCCcccccccCCcCcccccCCCEEECC-CCcc
Confidence 567652 12367899999999999999987543222 4789998 5554
No 114
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=89.38 E-value=0.16 Score=48.79 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=35.5
Q ss_pred cCceeccccCCC---ccccceeeeCCCccccccchhHHHHhcc
Q 003031 291 AGWAVERRKRPS---RKYMDTIYRSPEGRLFREFPKVWRVCGE 330 (855)
Q Consensus 291 AgW~i~~rkR~~---r~~~~~~y~sP~~~~~r~~~~aWk~cG~ 330 (855)
.||+-+-+.|.+ .-++|.||.||+|+.||+..++=+++++
T Consensus 40 ~GWkRe~~~RksG~Sagk~DVYY~SP~GKkfRSk~Ev~ryL~~ 82 (133)
T 1ub1_A 40 EGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEK 82 (133)
T ss_dssp TBCEEEEEECCCSSSCCSEEEEEECTTSCEESSHHHHHHHHTT
T ss_pred CCCEEEEEEecCCCCCCceeEEEECCCCCeeeCHHHHHHHHHH
Confidence 699988887774 5799999999999999999999999963
No 115
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=88.07 E-value=0.08 Score=58.43 Aligned_cols=81 Identities=26% Similarity=0.558 Sum_probs=51.4
Q ss_pred cccccccccCC--------ceeecCCCCCcccccccccCCCCCCCcccccccccccCCCCCCCccCCCcCccccc--ccc
Q 003031 741 DDSCGICGDGG--------ELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCS--QCE 810 (855)
Q Consensus 741 dD~C~VCgdGG--------eLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~Cd--qCe 810 (855)
++.|..|+.-. +.+.|..|-..|+..-.. ..++.| +..|++|+.. +.++.|+ .|.
T Consensus 50 e~~C~~CG~~~~~~~HPl~~v~lC~~Ck~~y~~~~f~---~D~DG~---~~yCr~C~~G---------g~l~~Cdn~~C~ 114 (386)
T 2pv0_B 50 EDICICCGSLQVHTQHPLFEGGICAPCKDKFLDALFL---YDDDGY---QSYCSICCSG---------ETLLICGNPDCT 114 (386)
T ss_dssp GGSBTTTCCSCCCSBCSSBSSBCCHHHHHHHHTTTTC---BCSSSS---BCSCTTTCCC---------SSCEECCSTTCC
T ss_pred cceeCCCCCcCccccCCCcCcchhhHHHHHHhccCcc---cCCCCC---cccceEcCCC---------CeEEEeCCCCCC
Confidence 47899998743 234455554444422221 111222 3458888864 6789999 999
Q ss_pred hhchhhhccCCcCCC------CCCceeeCCccH
Q 003031 811 HKYHGECLKDMSKGA------VSEAWFCNQSCQ 837 (855)
Q Consensus 811 raYHv~CL~p~~~~~------p~G~WFCs~~Ck 837 (855)
+.|+..|+.-..... ..+.|.|- .|.
T Consensus 115 r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf-~C~ 146 (386)
T 2pv0_B 115 RCYCFECVDSLVGPGTSGKVHAMSNWVCY-LCL 146 (386)
T ss_dssp CEECHHHHHHHTCTTHHHHHHHCSSCCCT-TTS
T ss_pred cchHHHHHHHhcChhHHHHhhccCCceEE-EcC
Confidence 999999998754222 16999996 554
No 116
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=87.47 E-value=0.23 Score=45.11 Aligned_cols=33 Identities=30% Similarity=0.815 Sum_probs=25.9
Q ss_pred ceeecCCCCCcccccccccC--CC----CCCCccccccc
Q 003031 752 ELICCDNCPSAFHQACLSIQ--DL----PTGSWFCSNCT 784 (855)
Q Consensus 752 eLLcCD~CPraFHlsCLgp~--~v----PeG~W~Cp~C~ 784 (855)
.|+.|+.|...||..|+++. .+ ..+.|.|+.|.
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~ 112 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCY 112 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC
T ss_pred ceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCc
Confidence 48899999999999999962 11 22359999885
No 117
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=86.33 E-value=0.18 Score=45.39 Aligned_cols=34 Identities=29% Similarity=0.779 Sum_probs=27.6
Q ss_pred eeecCCCCCcccccccccC--------CCC-CCCccccccccc
Q 003031 753 LICCDNCPSAFHQACLSIQ--------DLP-TGSWFCSNCTCW 786 (855)
Q Consensus 753 LLcCD~CPraFHlsCLgp~--------~vP-eG~W~Cp~C~C~ 786 (855)
|+.||.|..+||..|+++. ..| .-.|.|+.|...
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 7899999999999999862 445 347999999754
No 118
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=85.23 E-value=0.12 Score=46.32 Aligned_cols=90 Identities=31% Similarity=0.634 Sum_probs=52.5
Q ss_pred ccccccccccC-------CceeecCCCCCcccccccccCCCCCCCccccccc-------------------ccccCCCCC
Q 003031 740 NDDSCGICGDG-------GELICCDNCPSAFHQACLSIQDLPTGSWFCSNCT-------------------CWICGDLVN 793 (855)
Q Consensus 740 ndD~C~VCgdG-------GeLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~-------------------C~ICge~~~ 793 (855)
++..|.+|.+. ++.+.--.|+-.||..|+...... .-.||.|+ |.+|.+...
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--ANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTT--CSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHH
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHh--CCCCCCCCCcCccccccccccCCCCCCCCCCCCccc
Confidence 35679999862 444455578889999999752111 12577775 666654321
Q ss_pred CCccCCCcCcccccccchhchhhhccCCcCCCCCCceeeCCccHH
Q 003031 794 DKEASSSFDALKCSQCEHKYHGECLKDMSKGAVSEAWFCNQSCQE 838 (855)
Q Consensus 794 D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p~G~WFCs~~Cke 838 (855)
+.. ..........|.+.||..|+...... ...|| .|..
T Consensus 84 ~~~--~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP-~Cr~ 121 (133)
T 4ap4_A 84 EIV--QNGRLIVSTECGHVFCSQCLRDSLKN----ANTCP-TCRK 121 (133)
T ss_dssp HHH--HTTCCEEEETTSBEEEHHHHHHHHHH----CSBCT-TTCC
T ss_pred ccc--ccCcceEeCCCCChhhHHHHHHHHHc----CCCCC-CCCC
Confidence 100 01122345578899999998764321 23676 4543
No 119
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=84.47 E-value=0.12 Score=51.01 Aligned_cols=81 Identities=25% Similarity=0.544 Sum_probs=51.0
Q ss_pred cccccccccCC--------ceeecCCCCCcccccccccCCCCCCCcccccccccccCCCCCCCccCCCcCccccc--ccc
Q 003031 741 DDSCGICGDGG--------ELICCDNCPSAFHQACLSIQDLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCS--QCE 810 (855)
Q Consensus 741 dD~C~VCgdGG--------eLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~Cd--qCe 810 (855)
++.|..|+.-. +.+.|..|-..|+..-... -.+| ....|++|+.. +.++.|+ .|.
T Consensus 36 e~~Ct~CG~~~~~~~HPlf~v~lC~~Ck~~y~e~~f~~--DeDG----~~~yC~wC~~G---------g~l~~Cdn~~C~ 100 (159)
T 3a1b_A 36 EDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQY--DDDG----YQSYCTICCGG---------REVLMCGNNNCC 100 (159)
T ss_dssp GGSBTTTCCSCCCEECSSBSSEECHHHHHHHHHHTTCB--CTTS----SBSSCTTTSCC---------SEEEECSSTTTC
T ss_pred cCcccCCCCcCccccCCCccchhhHHHHHHHhhccccc--CCCC----CcceeeEecCC---------CeEEeeCCCCCC
Confidence 67899998732 2344555555554322221 1111 13348888863 6789999 899
Q ss_pred hhchhhhccCCcCCC------CCCceeeCCccH
Q 003031 811 HKYHGECLKDMSKGA------VSEAWFCNQSCQ 837 (855)
Q Consensus 811 raYHv~CL~p~~~~~------p~G~WFCs~~Ck 837 (855)
+.|+..|+.-..... ..+.|.|= .|.
T Consensus 101 r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy-~C~ 132 (159)
T 3a1b_A 101 RCFCVECVDLLVGPGAAQAAIKEDPWNCY-MCG 132 (159)
T ss_dssp CEEEHHHHHHHTCTTHHHHHHTSSSCCCT-TTC
T ss_pred CchhHHHHHHhcCHhHHHHHhccCCCEEE-ecC
Confidence 999999997653321 28999995 554
No 120
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=82.57 E-value=0.34 Score=43.58 Aligned_cols=35 Identities=20% Similarity=0.504 Sum_probs=25.5
Q ss_pred cccccccchhchhhhccCCc------CCCC-CCceeeCCccH
Q 003031 803 ALKCSQCEHKYHGECLKDMS------KGAV-SEAWFCNQSCQ 837 (855)
Q Consensus 803 LL~CdqCeraYHv~CL~p~~------~~~p-~G~WFCs~~Ck 837 (855)
|+.|+.|+.+||..|..-.. ...+ ...|.||.++.
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 68899999999999987542 1223 55789985543
No 121
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=67.31 E-value=2.5 Score=42.39 Aligned_cols=24 Identities=21% Similarity=0.450 Sum_probs=19.8
Q ss_pred cccCCc----eeecCCCCCccccccccc
Q 003031 747 CGDGGE----LICCDNCPSAFHQACLSI 770 (855)
Q Consensus 747 CgdGGe----LLcCD~CPraFHlsCLgp 770 (855)
|+.+|+ ++.|..|.+.||..|+..
T Consensus 10 CG~~~~~~~~mLqC~~C~qWFH~~Cl~~ 37 (177)
T 3rsn_A 10 EENGRQLGEVELQCGICTKWFTADTFGI 37 (177)
T ss_dssp -CTTCCTTSCEEECTTTCCEEEGGGGTC
T ss_pred cCCCCCCCceeEeeccccceecHHHhcc
Confidence 676554 889999999999999984
No 122
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=65.73 E-value=3.6 Score=41.24 Aligned_cols=46 Identities=11% Similarity=0.259 Sum_probs=29.3
Q ss_pred ccCCCCCCCccCCCcCcccccccchhchhhhccCCcCCCC----CCceeeCCccHH
Q 003031 787 ICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMSKGAV----SEAWFCNQSCQE 838 (855)
Q Consensus 787 ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~~~~p----~G~WFCs~~Cke 838 (855)
.||.+... ...+++|..|.++||..|++....... .-.+.| ..|..
T Consensus 9 YCG~~~~~-----~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C-~~C~~ 58 (177)
T 3rsn_A 9 DEENGRQL-----GEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHC-NVCHH 58 (177)
T ss_dssp --CTTCCT-----TSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEEC-TTTST
T ss_pred EcCCCCCC-----CceeEeeccccceecHHHhcccccCccccceeEEEEc-cccCC
Confidence 37875322 356899999999999999986542222 333345 57765
No 123
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=63.94 E-value=4.1 Score=31.30 Aligned_cols=30 Identities=23% Similarity=0.604 Sum_probs=21.9
Q ss_pred cccccccccC----CceeecCCCCCccccccccc
Q 003031 741 DDSCGICGDG----GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 741 dD~C~VCgdG----GeLLcCD~CPraFHlsCLgp 770 (855)
+..|.+|.+. ........|.-.||..|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~ 38 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDM 38 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHH
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHH
Confidence 4679999862 23444556899999999975
No 124
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.92 E-value=3.1 Score=35.93 Aligned_cols=31 Identities=23% Similarity=0.532 Sum_probs=24.1
Q ss_pred ccccccccccC-CceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
..+.|.+|.+- -.-+.|..|...||..|+..
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIRMHLPCVAK 45 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCEECHHHHHH
T ss_pred CCCcCcchhhHcccCCccCCCCchhhHHHHHH
Confidence 45679999872 23357889999999999984
No 125
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.41 E-value=1.5 Score=37.96 Aligned_cols=33 Identities=36% Similarity=0.650 Sum_probs=21.7
Q ss_pred cccccccccccc----CCceee---cCCCCCccccccccc
Q 003031 738 DKNDDSCGICGD----GGELIC---CDNCPSAFHQACLSI 770 (855)
Q Consensus 738 d~ndD~C~VCgd----GGeLLc---CD~CPraFHlsCLgp 770 (855)
...++.|.||.+ ++.++. |.+....||..|+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~ 51 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQ 51 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHH
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHH
Confidence 345678999985 234442 222348999999985
No 126
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=55.57 E-value=5.2 Score=44.20 Aligned_cols=31 Identities=39% Similarity=0.918 Sum_probs=23.7
Q ss_pred cccccccccc----CCce--eecC--CCCCccccccccc
Q 003031 740 NDDSCGICGD----GGEL--ICCD--NCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgd----GGeL--LcCD--~CPraFHlsCLgp 770 (855)
....|.||-. +|++ ..|+ .|...||..|+..
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~k 345 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEE 345 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHH
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHH
Confidence 4567999975 2443 4688 7999999999974
No 127
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=53.97 E-value=4.6 Score=46.41 Aligned_cols=77 Identities=23% Similarity=0.513 Sum_probs=25.7
Q ss_pred ccccccccc-----CCceeecCCCCCccccccccc-CCCC--------------CCCccc----ccccccccCCCCCCCc
Q 003031 741 DDSCGICGD-----GGELICCDNCPSAFHQACLSI-QDLP--------------TGSWFC----SNCTCWICGDLVNDKE 796 (855)
Q Consensus 741 dD~C~VCgd-----GGeLLcCD~CPraFHlsCLgp-~~vP--------------eG~W~C----p~C~C~ICge~~~D~e 796 (855)
-.+|.+|++ +-+-+.|..|.-..|..|... .... .-.|.- ..-.|..|++....-
T Consensus 48 p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g~- 126 (674)
T 3pfq_A 48 PTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGL- 126 (674)
T ss_dssp ------------------------------------------------------CCCCCEECCSSCCCCSSSCSCCBBS-
T ss_pred CCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccchh-
Confidence 367999987 247789999999999999873 1100 012321 112388888753211
Q ss_pred cCCCcCcccccccchhchhhhccCC
Q 003031 797 ASSSFDALKCSQCEHKYHGECLKDM 821 (855)
Q Consensus 797 ~~s~~~LL~CdqCeraYHv~CL~p~ 821 (855)
...-+.|..|...+|..|....
T Consensus 127 ---~~qg~~C~~C~~~~H~~C~~~v 148 (674)
T 3pfq_A 127 ---IHQGMKCDTCMMNVHKRCVMNV 148 (674)
T ss_dssp ---SSCEECCSSSCCCBCSSTTSSS
T ss_pred ---hcCccccccCCcchhhhhhhcc
Confidence 1245889999999999998653
No 128
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=53.00 E-value=1.9 Score=35.50 Aligned_cols=45 Identities=24% Similarity=0.483 Sum_probs=25.2
Q ss_pred cccccccccccC--Ccee-e--cCCCCCcccccccccCCCCCCCcccccc
Q 003031 739 KNDDSCGICGDG--GELI-C--CDNCPSAFHQACLSIQDLPTGSWFCSNC 783 (855)
Q Consensus 739 ~ndD~C~VCgdG--GeLL-c--CD~CPraFHlsCLgp~~vPeG~W~Cp~C 783 (855)
.....|.||.++ ++++ - |.+.-+.||..||.......+.+.|+-|
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C 53 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQIC 53 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTT
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCC
Confidence 456789999763 2332 2 2233448999999862222233444444
No 129
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=51.07 E-value=5.5 Score=41.00 Aligned_cols=30 Identities=23% Similarity=0.553 Sum_probs=24.3
Q ss_pred ccccccccc-CCceeecCCCCCccccccccc
Q 003031 741 DDSCGICGD-GGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 741 dD~C~VCgd-GGeLLcCD~CPraFHlsCLgp 770 (855)
...|.+|.+ --.-..|..|+..||..|+.-
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAK 210 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHH
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHH
Confidence 466999998 223478999999999999975
No 130
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=47.87 E-value=9 Score=33.94 Aligned_cols=40 Identities=23% Similarity=0.767 Sum_probs=29.3
Q ss_pred CCCCCCcccccccccccCCCCCCCccCCCcCcccccc--cchhchhhhccCC
Q 003031 772 DLPTGSWFCSNCTCWICGDLVNDKEASSSFDALKCSQ--CEHKYHGECLKDM 821 (855)
Q Consensus 772 ~vPeG~W~Cp~C~C~ICge~~~D~e~~s~~~LL~Cdq--CeraYHv~CL~p~ 821 (855)
.+|...|. =+|.+|++. ..+..+.|.. |.++||+.|....
T Consensus 10 NIp~~R~~---l~C~iC~~~-------~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 10 NIPPARWK---LTCYLCKQK-------GVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp CCCCCCCC---CCBTTTTBC-------CSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred CCChHHhc---CCCcCCCCC-------CCcEeEecCCCCCCCcCcHHHHHHC
Confidence 46777784 358899853 1245688985 9999999998764
No 131
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.37 E-value=7.5 Score=31.97 Aligned_cols=32 Identities=22% Similarity=0.534 Sum_probs=23.3
Q ss_pred ccccccccccc---CCceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGD---GGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgd---GGeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+ .++.+..-.|.-.||..|+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~ 55 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 55 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHH
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHH
Confidence 34567999985 344444456888999999975
No 132
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=46.12 E-value=8.8 Score=28.48 Aligned_cols=11 Identities=27% Similarity=1.168 Sum_probs=8.7
Q ss_pred CCCCccccccc
Q 003031 774 PTGSWFCSNCT 784 (855)
Q Consensus 774 PeG~W~Cp~C~ 784 (855)
..|+|.|+.|.
T Consensus 3 ~~gDW~C~~C~ 13 (33)
T 2k1p_A 3 SANDWQCKTCS 13 (33)
T ss_dssp SSSSCBCSSSC
T ss_pred CCCCcccCCCC
Confidence 46899999764
No 133
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=45.75 E-value=11 Score=30.38 Aligned_cols=33 Identities=30% Similarity=0.665 Sum_probs=23.4
Q ss_pred cccccccccccc---CCceeecCCCCCccccccccc
Q 003031 738 DKNDDSCGICGD---GGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 738 d~ndD~C~VCgd---GGeLLcCD~CPraFHlsCLgp 770 (855)
...+..|.||.+ .++.+..-.|.-.||..|+..
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~ 46 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQ 46 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHH
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHH
Confidence 345577999965 334444456899999999974
No 134
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=45.32 E-value=4.2 Score=31.18 Aligned_cols=31 Identities=19% Similarity=0.486 Sum_probs=23.0
Q ss_pred ccccccccccC----CceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDG----GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdG----GeLLcCD~CPraFHlsCLgp 770 (855)
.+..|.+|.+. ++.+..-.|.-.||..|+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 38 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEE 38 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHH
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHH
Confidence 35679999863 34455667888999999974
No 135
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=42.82 E-value=11 Score=33.98 Aligned_cols=59 Identities=20% Similarity=0.490 Sum_probs=33.8
Q ss_pred CCCccccccc-------ccccCCCCCCCccCCCcCcccccccchhch--hhhccCCc-----CCC----CCCceeeCCcc
Q 003031 775 TGSWFCSNCT-------CWICGDLVNDKEASSSFDALKCSQCEHKYH--GECLKDMS-----KGA----VSEAWFCNQSC 836 (855)
Q Consensus 775 eG~W~Cp~C~-------C~ICge~~~D~e~~s~~~LL~CdqCeraYH--v~CL~p~~-----~~~----p~G~WFCs~~C 836 (855)
+|.-+|..|- |..|++++...+ ..+ ..-++.|| ..|..-.. ... ..+.-||..+|
T Consensus 49 ~g~~yC~~cy~~~~~~~C~~C~~~I~~~~-----~~~--~a~~~~~H~~~~CF~C~~C~~~l~~~~f~~~~~~~yC~~~~ 121 (126)
T 2xqn_T 49 NDKPVCKPCYVKNHAVVCQGCHNAIDPEV-----QRV--TYNNFSWHASTECFLCSCCSKCLIGQKFMPVEGMVFCSVEC 121 (126)
T ss_dssp TTEEEEHHHHHHHSCCBCTTTCSBCCTTS-----CEE--EETTEEEESSTTTSBCTTTCCBCTTSEEEEETTEEESSHHH
T ss_pred CCEEechHHhCcCcCccCcccCCcCCcCc-----eEE--ECCCCEeeCCCCCcCcCCCCCccCCCeeEeECCEEcchHHh
Confidence 4567787773 999999864321 111 12345677 66654321 111 26778887788
Q ss_pred HHHH
Q 003031 837 QEVG 840 (855)
Q Consensus 837 keI~ 840 (855)
.++|
T Consensus 122 ~~~f 125 (126)
T 2xqn_T 122 KKRM 125 (126)
T ss_dssp HHSC
T ss_pred hhhc
Confidence 7654
No 136
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=42.03 E-value=18 Score=29.66 Aligned_cols=32 Identities=25% Similarity=0.614 Sum_probs=21.6
Q ss_pred cccccccccccC---CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG---GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG---GeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.||.+. ++.+.--.|.-.||..|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~ 47 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVP 47 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHH
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHH
Confidence 445789999762 33322235888999999974
No 137
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=38.67 E-value=9.4 Score=28.15 Aligned_cols=10 Identities=30% Similarity=1.262 Sum_probs=8.1
Q ss_pred CCCccccccc
Q 003031 775 TGSWFCSNCT 784 (855)
Q Consensus 775 eG~W~Cp~C~ 784 (855)
.|+|.|+.|.
T Consensus 3 ~gDW~C~~C~ 12 (32)
T 2lk0_A 3 FEDWLCNKCC 12 (32)
T ss_dssp CSEEECTTTC
T ss_pred CCCCCcCcCc
Confidence 5899999874
No 138
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=38.51 E-value=13 Score=32.78 Aligned_cols=15 Identities=40% Similarity=0.804 Sum_probs=11.9
Q ss_pred cCCCCCccccccccc
Q 003031 756 CDNCPSAFHQACLSI 770 (855)
Q Consensus 756 CD~CPraFHlsCLgp 770 (855)
--.|.-.||..|+..
T Consensus 58 ~~~C~H~Fh~~Ci~~ 72 (114)
T 1v87_A 58 LTKCSHAFHLLCLLA 72 (114)
T ss_dssp ESSSCCEECHHHHHH
T ss_pred cCCCCCcccHHHHHH
Confidence 345888999999985
No 139
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=38.17 E-value=9.6 Score=31.45 Aligned_cols=32 Identities=19% Similarity=0.521 Sum_probs=22.4
Q ss_pred cccccccccccC-CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+. .+.+.-..|+-.||..|+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 45 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRT 45 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSCCEECTTHHHH
T ss_pred CCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHH
Confidence 445779999873 33344344888999999874
No 140
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=36.09 E-value=21 Score=31.96 Aligned_cols=32 Identities=34% Similarity=0.883 Sum_probs=26.1
Q ss_pred ceeecCCCCC-cccccccccCCCCCCCccccccc
Q 003031 752 ELICCDNCPS-AFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 752 eLLcCD~CPr-aFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
+|+.|..|.. .-|..|..+.. ....|.|..|.
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~l~~-~~~~weC~~C~ 77 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSSLRP-NSKKWECNECL 77 (85)
T ss_dssp BCEECSSSCCCEECSGGGTCCT-TCSCCCCTTTS
T ss_pred EEEeCcccCCchhHHHHhCCcC-CCCCEECCcCc
Confidence 6899999988 79999998742 45579998887
No 141
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=35.33 E-value=11 Score=32.52 Aligned_cols=32 Identities=31% Similarity=0.692 Sum_probs=22.5
Q ss_pred ccccccccccc---CCceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGD---GGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgd---GGeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.||.+ .++.+..-.|.-.||..|+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~ 72 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSI 72 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHH
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHH
Confidence 34567999975 233333345899999999975
No 142
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.58 E-value=13 Score=32.01 Aligned_cols=30 Identities=27% Similarity=0.662 Sum_probs=22.5
Q ss_pred ccccCCCCCCCccCCCcCcccccccchhchhhhccCCc
Q 003031 785 CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLKDMS 822 (855)
Q Consensus 785 C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~p~~ 822 (855)
|.||...+. .-..|..|...||..|+..-.
T Consensus 18 C~IC~~~i~--------~g~~C~~C~h~fH~~Ci~kWl 47 (74)
T 2ct0_A 18 CNICHSLLI--------QGQSCETCGIRMHLPCVAKYF 47 (74)
T ss_dssp CSSSCCBCS--------SSEECSSSCCEECHHHHHHHS
T ss_pred CcchhhHcc--------cCCccCCCCchhhHHHHHHHH
Confidence 778887532 124788999999999998643
No 143
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.26 E-value=33 Score=26.93 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=18.6
Q ss_pred cccccccccccCCceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDGGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+.-.-..--.|+-.|+..|+..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~ 35 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA 35 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHcc
Confidence 34566999987322111224776777777754
No 144
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.90 E-value=30 Score=27.83 Aligned_cols=31 Identities=23% Similarity=0.540 Sum_probs=21.9
Q ss_pred cccccccccccC-CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+. .+.+.. .|+-.||..|+..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~ 49 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQ 49 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHH
T ss_pred ccCCEeccCCcccCCeEEc-CCCChhhHHHHHH
Confidence 345679999973 232222 7888999999975
No 145
>1qz7_B Axin; beta-catenin, protein-protein complex, cell adhesion; 2.20A {Xenopus laevis}
Probab=30.68 E-value=23 Score=30.83 Aligned_cols=24 Identities=21% Similarity=0.508 Sum_probs=21.5
Q ss_pred cCCChHHHHHHHHHHHHHcCceec
Q 003031 273 KMDPRSLLQNHIFNLLTAAGWAVE 296 (855)
Q Consensus 273 ~~d~~~~l~~h~~~l~~~AgW~i~ 296 (855)
++||-.+|..|+.|+|+.-|-..-
T Consensus 32 EedPesILDeHvsRV~ktPGcqSP 55 (70)
T 1qz7_B 32 EENPESILDEHVQRVMKTPGCQSP 55 (70)
T ss_pred ccChHHHHHHHHHHHHhCcCCCCC
Confidence 689999999999999999986654
No 146
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.61 E-value=16 Score=30.99 Aligned_cols=14 Identities=36% Similarity=1.094 Sum_probs=11.9
Q ss_pred CCCCCccccccccc
Q 003031 757 DNCPSAFHQACLSI 770 (855)
Q Consensus 757 D~CPraFHlsCLgp 770 (855)
..|.-.||..|+..
T Consensus 46 ~~C~H~FH~~Ci~~ 59 (81)
T 2ecl_A 46 GECNHSFHNCCMSL 59 (81)
T ss_dssp ETTSCEEEHHHHHH
T ss_pred CCCCCccChHHHHH
Confidence 36889999999985
No 147
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=30.56 E-value=12 Score=34.14 Aligned_cols=44 Identities=27% Similarity=0.792 Sum_probs=25.9
Q ss_pred cccccccccc-------CCceeecCCCCCcccccccccCCCCCCCccccccc
Q 003031 740 NDDSCGICGD-------GGELICCDNCPSAFHQACLSIQDLPTGSWFCSNCT 784 (855)
Q Consensus 740 ndD~C~VCgd-------GGeLLcCD~CPraFHlsCLgp~~vPeG~W~Cp~C~ 784 (855)
+..+|.+|++ |.-.+.|..|.-..-..|+.- +..+|.-.||.|.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY-ErkeG~q~CpqCk 65 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY-ERREGTQNCPQCK 65 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH-HHHTSCSSCTTTC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHH-HHhccCccccccC
Confidence 4578999998 345777877765554555543 2223444455544
No 148
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=30.54 E-value=17 Score=32.20 Aligned_cols=28 Identities=36% Similarity=0.827 Sum_probs=23.0
Q ss_pred cccccccc--CCceeecCC--CCCcccccccc
Q 003031 742 DSCGICGD--GGELICCDN--CPSAFHQACLS 769 (855)
Q Consensus 742 D~C~VCgd--GGeLLcCD~--CPraFHlsCLg 769 (855)
..|.+|++ .|--+-|.. |..+||..|..
T Consensus 18 l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 18 LTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred CCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 45999986 377788875 99999999975
No 149
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.41 E-value=24 Score=28.61 Aligned_cols=31 Identities=26% Similarity=0.606 Sum_probs=21.0
Q ss_pred ccccccccccC---CceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDG---GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdG---GeLLcCD~CPraFHlsCLgp 770 (855)
.+..|.||.+. +..+.--.|.-.||..|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~ 47 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIK 47 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHH
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHH
Confidence 45679999873 22222224888999999974
No 150
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=28.46 E-value=17 Score=31.06 Aligned_cols=11 Identities=27% Similarity=1.005 Sum_probs=6.8
Q ss_pred cccccccchhc
Q 003031 803 ALKCSQCEHKY 813 (855)
Q Consensus 803 LL~CdqCeraY 813 (855)
.+.|..|++.|
T Consensus 66 ~~~C~~C~~~f 76 (124)
T 2dlq_A 66 VFTCSVCQETF 76 (124)
T ss_dssp CEECSSSCCEE
T ss_pred CeECCCCCCcc
Confidence 45666666665
No 151
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.36 E-value=23 Score=27.94 Aligned_cols=32 Identities=41% Similarity=0.791 Sum_probs=23.1
Q ss_pred cccccccccccC-------CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG-------GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG-------GeLLcCD~CPraFHlsCLgp 770 (855)
.....|.||.+. ++.+.-..|.-.||..|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 51 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD 51 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHH
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHH
Confidence 345679999872 34445567888999999974
No 152
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=27.58 E-value=22 Score=28.36 Aligned_cols=31 Identities=42% Similarity=0.816 Sum_probs=23.5
Q ss_pred ccccccccccC-------CceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDG-------GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdG-------GeLLcCD~CPraFHlsCLgp 770 (855)
.+..|.+|.+. ++.+..-.|+-.||..|+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 46 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD 46 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHH
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHH
Confidence 45679999862 45556668999999999974
No 153
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=27.39 E-value=30 Score=32.88 Aligned_cols=39 Identities=18% Similarity=0.359 Sum_probs=23.0
Q ss_pred CCCCccccccc-------ccccCCCCCCCccCCCcCcccccccchhchhhhcc
Q 003031 774 PTGSWFCSNCT-------CWICGDLVNDKEASSSFDALKCSQCEHKYHGECLK 819 (855)
Q Consensus 774 PeG~W~Cp~C~-------C~ICge~~~D~e~~s~~~LL~CdqCeraYHv~CL~ 819 (855)
.+|.-||..|- |..|++.+...+. ++ ..-++.||..|..
T Consensus 50 ~~g~~yC~~~y~~~f~~~C~~C~~~I~~~~~-----v~--~a~~~~~H~~CF~ 95 (169)
T 2rgt_A 50 RGESVYCKDDFFKRFGTKCAACQLGIPPTQV-----VR--RAQDFVYHLHCFA 95 (169)
T ss_dssp SSSCEECHHHHHHHHSCBCTTTCCBCCTTSE-----EE--EETTEEEEGGGCB
T ss_pred cCCeeeecccccccccccccccccccCCCcE-----EE--EcCCceEeeCCCc
Confidence 36678888884 9999987543211 11 1234567766654
No 154
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.17 E-value=18 Score=29.07 Aligned_cols=30 Identities=30% Similarity=0.684 Sum_probs=21.2
Q ss_pred ccccccccccCCceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDGGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdGGeLLcCD~CPraFHlsCLgp 770 (855)
....|.+|.+.-.- .--.|.-.||..|+..
T Consensus 14 ~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~ 43 (70)
T 2ecn_A 14 DEEECCICMDGRAD-LILPCAHSFCQKCIDK 43 (70)
T ss_dssp CCCCCSSSCCSCCS-EEETTTEEECHHHHHH
T ss_pred CCCCCeeCCcCccC-cccCCCCcccHHHHHH
Confidence 45679999874322 2335888899999975
No 155
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.32 E-value=27 Score=28.33 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=21.3
Q ss_pred cccccccccccC-CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+. .+.+.- .|.-.||..|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~ 44 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL-PCKHVFCYLCVKG 44 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHH
T ss_pred CCCCCCccCCcccCCCEEc-cCCCHHHHHHHHH
Confidence 345679999873 232222 5888899999874
No 156
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.99 E-value=36 Score=26.04 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=25.8
Q ss_pred ccccccccccCC-ceeecCCCCCcccccccccCCC-CCCCcccccc
Q 003031 740 NDDSCGICGDGG-ELICCDNCPSAFHQACLSIQDL-PTGSWFCSNC 783 (855)
Q Consensus 740 ndD~C~VCgdGG-eLLcCD~CPraFHlsCLgp~~v-PeG~W~Cp~C 783 (855)
.+..|.+|.+.- +.+. -.|.-.||..|+..... ......||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVI-IECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCC-CSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEe-CCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 456799998732 2111 25888899999875211 1234566655
No 157
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=25.05 E-value=44 Score=27.14 Aligned_cols=30 Identities=23% Similarity=0.635 Sum_probs=20.1
Q ss_pred ccccccccccC-CceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
.+..|.+|.+. .+.+. -.|+-.||..|+..
T Consensus 11 ~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~ 41 (79)
T 2egp_A 11 EEVTCPICLELLTEPLS-LDCGHSLCRACITV 41 (79)
T ss_dssp CCCEETTTTEECSSCCC-CSSSCCCCHHHHSC
T ss_pred cCCCCcCCCcccCCeeE-CCCCCHHHHHHHHH
Confidence 45679999872 22221 25888899999874
No 158
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=25.00 E-value=18 Score=32.73 Aligned_cols=14 Identities=43% Similarity=0.819 Sum_probs=11.8
Q ss_pred CCCCCccccccccc
Q 003031 757 DNCPSAFHQACLSI 770 (855)
Q Consensus 757 D~CPraFHlsCLgp 770 (855)
-.|.-.||..|+..
T Consensus 71 ~~C~H~FH~~Ci~~ 84 (106)
T 3dpl_R 71 GVCNHAFHFHCISR 84 (106)
T ss_dssp ETTSCEEEHHHHHH
T ss_pred cccCcEECHHHHHH
Confidence 36888999999985
No 159
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=25.00 E-value=13 Score=34.64 Aligned_cols=18 Identities=28% Similarity=0.538 Sum_probs=5.1
Q ss_pred eEeccCCCccch-hhhhhh
Q 003031 671 IICKCCNLVFSV-SQFKIH 688 (855)
Q Consensus 671 I~C~CC~kv~S~-S~FE~H 688 (855)
..|.-|++.|.. ..+..|
T Consensus 22 ~~C~~C~~~f~~~~~l~~H 40 (190)
T 2i13_A 22 YACPECGKSFSRSDHLAEH 40 (190)
T ss_dssp ---------CCSSHHHHHG
T ss_pred CcCCCCccccCCHHHHHHH
Confidence 568888877654 446666
No 160
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=24.76 E-value=32 Score=27.19 Aligned_cols=12 Identities=33% Similarity=1.320 Sum_probs=8.8
Q ss_pred CCCCCcccc--ccc
Q 003031 773 LPTGSWFCS--NCT 784 (855)
Q Consensus 773 vPeG~W~Cp--~C~ 784 (855)
...|+|.|+ .|.
T Consensus 10 ~~~GDW~C~~~~C~ 23 (45)
T 1n0z_A 10 VSDGDWICPDKKCG 23 (45)
T ss_dssp SCSSSCBCSSTTTC
T ss_pred CCCCCcCCCCCCCC
Confidence 457899999 554
No 161
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=24.69 E-value=18 Score=33.66 Aligned_cols=33 Identities=33% Similarity=0.602 Sum_probs=1.9
Q ss_pred ccccccccccccCCc------------------eeecCCCCCccccccccc
Q 003031 738 DKNDDSCGICGDGGE------------------LICCDNCPSAFHQACLSI 770 (855)
Q Consensus 738 d~ndD~C~VCgdGGe------------------LLcCD~CPraFHlsCLgp 770 (855)
+..++.|.||.+.=+ .+.-..|.-.||..|+..
T Consensus 45 d~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~ 95 (117)
T 4a0k_B 45 DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR 95 (117)
T ss_dssp CCCC-----------------------------------------------
T ss_pred cCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHH
Confidence 345678999976311 111125888899999976
No 162
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.52 E-value=44 Score=27.20 Aligned_cols=30 Identities=27% Similarity=0.739 Sum_probs=20.5
Q ss_pred ccccccccccC-CceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
.+..|.+|.+. .+.+. -.|.-.||..|+..
T Consensus 18 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~ 48 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVS-ADCNHSFCRACITL 48 (85)
T ss_dssp TTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHH
T ss_pred cCCCCcCCChhhCccee-CCCCCHHHHHHHHH
Confidence 45679999873 22222 24888899999874
No 163
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=23.94 E-value=26 Score=31.20 Aligned_cols=22 Identities=27% Similarity=0.921 Sum_probs=12.5
Q ss_pred cccccccc----CCceeecCCCCCcc
Q 003031 742 DSCGICGD----GGELICCDNCPSAF 763 (855)
Q Consensus 742 D~C~VCgd----GGeLLcCD~CPraF 763 (855)
..|..|.. .+...-|..|.+-|
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~ 28 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDF 28 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEE
T ss_pred CCCCCCCCccccCCCceECccccccC
Confidence 34666664 33455577776643
No 164
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=23.85 E-value=18 Score=30.65 Aligned_cols=32 Identities=19% Similarity=0.521 Sum_probs=21.4
Q ss_pred cccccccccccC-CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+. .+-+.-..|+-.|+..|+..
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 43 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRT 43 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECHHHHHH
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHHHHHHH
Confidence 345679999872 23333344888898888864
No 165
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=23.25 E-value=41 Score=29.10 Aligned_cols=20 Identities=30% Similarity=0.767 Sum_probs=13.0
Q ss_pred cccccccccccCCceeecCCC
Q 003031 739 KNDDSCGICGDGGELICCDNC 759 (855)
Q Consensus 739 ~ndD~C~VCgdGGeLLcCD~C 759 (855)
+...+|.||.+...| .|.+|
T Consensus 6 ee~pWC~ICneDAtl-rC~gC 25 (67)
T 2d8v_A 6 SGLPWCCICNEDATL-RCAGC 25 (67)
T ss_dssp CCCSSCTTTCSCCCE-EETTT
T ss_pred cCCCeeEEeCCCCeE-EecCC
Confidence 455788888887554 45554
No 166
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=22.95 E-value=13 Score=32.60 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=24.6
Q ss_pred cccccccccc-CCceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGD-GGELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgd-GGeLLcCD~CPraFHlsCLgp 770 (855)
.+..|.+|.+ -.+.+.|..|+-.||..|+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~ 52 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRR 52 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHH
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHH
Confidence 3467999988 345667789999999999974
No 167
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=22.70 E-value=55 Score=31.43 Aligned_cols=71 Identities=17% Similarity=0.307 Sum_probs=38.4
Q ss_pred ccccccccc---CCceeecCCCCCccccccccc-------C---CCCCCCccccccc-------ccccCCCCCCCccCCC
Q 003031 741 DDSCGICGD---GGELICCDNCPSAFHQACLSI-------Q---DLPTGSWFCSNCT-------CWICGDLVNDKEASSS 800 (855)
Q Consensus 741 dD~C~VCgd---GGeLLcCD~CPraFHlsCLgp-------~---~vPeG~W~Cp~C~-------C~ICge~~~D~e~~s~ 800 (855)
...|..|+. ++..+.- -.+.||..|..- . ...+|.-||..|- |..|++++...+.
T Consensus 60 ~~~C~~C~~~I~~~~~~~a--~~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~~kC~~C~~~I~~~~~--- 134 (182)
T 2jtn_A 60 IPMCAGCDQHILDRFILKA--LDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQV--- 134 (182)
T ss_dssp CCBCBTSSSBCCCSEEEEE--TTEEECSSTTSCTTTCCCCSSCCEEETTEEECHHHHHHTTSCCCTTTCCCCCSSCC---
T ss_pred CCcCccCCCCccCceeEEe--cCCeEccccCccCCCCCccCCCceeECCEeeecCccccccccccccCCCccCCCce---
Confidence 356888876 2222222 245677666541 0 1125677888884 9999987543211
Q ss_pred cCcccccccchhchhhhccC
Q 003031 801 FDALKCSQCEHKYHGECLKD 820 (855)
Q Consensus 801 ~~LL~CdqCeraYHv~CL~p 820 (855)
++ ..-++.||..|..-
T Consensus 135 --v~--~a~~~~~H~~CF~C 150 (182)
T 2jtn_A 135 --VR--RAQDFVYHLHCFAC 150 (182)
T ss_dssp --CC--EETTEECCTTTCCC
T ss_pred --EE--ecCCCCEEeCCCcC
Confidence 11 12345677776543
No 168
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.26 E-value=50 Score=26.79 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=22.7
Q ss_pred cccccccccccC-CceeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDG-GELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdG-GeLLcCD~CPraFHlsCLgp 770 (855)
..+..|.+|.+. .+.+.-..|.-.||..|+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 45 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECLHTFCKSCIVR 45 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSCCEECHHHHHH
T ss_pred CCCCCCCCCChHHHCcCEECCCCCHHHHHHHHH
Confidence 345779999873 33444457888999999864
No 169
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.71 E-value=31 Score=27.54 Aligned_cols=30 Identities=17% Similarity=0.373 Sum_probs=20.4
Q ss_pred ccccccccccCC-ceeecCCCCCccccccccc
Q 003031 740 NDDSCGICGDGG-ELICCDNCPSAFHQACLSI 770 (855)
Q Consensus 740 ndD~C~VCgdGG-eLLcCD~CPraFHlsCLgp 770 (855)
.+..|.+|.+.- +.+. -.|+-.||..|+..
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~ 44 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ-TECGHRFCESCMAA 44 (66)
T ss_dssp CCEECTTTCCEESSCCC-CSSSCCCCHHHHHH
T ss_pred cCCCCCCCChHhcCeeE-CCCCCHHHHHHHHH
Confidence 456799998732 2111 36888899999875
No 170
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.52 E-value=26 Score=29.04 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=21.0
Q ss_pred cccccccccccCC-c---eeecCCCCCccccccccc
Q 003031 739 KNDDSCGICGDGG-E---LICCDNCPSAFHQACLSI 770 (855)
Q Consensus 739 ~ndD~C~VCgdGG-e---LLcCD~CPraFHlsCLgp 770 (855)
.....|.+|.+.- + ...--.|+-.||..|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~ 48 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEK 48 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHH
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHH
Confidence 3456799998731 1 122226888999999874
Done!