Citrus Sinensis ID: 003033
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 855 | 2.2.26 [Sep-21-2011] | |||||||
| Q8GUH1 | 834 | U-box domain-containing p | yes | no | 0.933 | 0.956 | 0.557 | 0.0 | |
| Q94A51 | 805 | U-box domain-containing p | no | no | 0.569 | 0.604 | 0.445 | 1e-116 | |
| Q0DR28 | 518 | U-box domain-containing p | no | no | 0.419 | 0.693 | 0.453 | 5e-95 | |
| Q9SW11 | 835 | U-box domain-containing p | no | no | 0.870 | 0.891 | 0.306 | 5e-95 | |
| Q9FKG5 | 796 | U-box domain-containing p | no | no | 0.429 | 0.461 | 0.426 | 5e-87 | |
| Q9FKG6 | 845 | U-box domain-containing p | no | no | 0.500 | 0.506 | 0.381 | 6e-87 | |
| Q9LU47 | 819 | Putative U-box domain-con | no | no | 0.442 | 0.461 | 0.404 | 4e-85 | |
| Q8S8S7 | 801 | U-box domain-containing p | no | no | 0.389 | 0.415 | 0.404 | 1e-76 | |
| Q9FGD7 | 765 | Putative U-box domain-con | no | no | 0.536 | 0.6 | 0.340 | 2e-65 | |
| C0LGQ7 | 898 | Probable LRR receptor-lik | no | no | 0.298 | 0.283 | 0.367 | 3e-43 |
| >sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/890 (55%), Positives = 625/890 (70%), Gaps = 92/890 (10%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
MALVS +PA+ + S+R I G SSR GI++EPV+ +I++KI+VAV K V +SKS
Sbjct: 1 MALVSPIPAMGERAGSMRFHGIGSPGSRSSRSGIMDEPVSRLIDEKIFVAVDKHVAKSKS 60
Query: 61 VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
L+WALQN+GGK+IC+IHVH P+QMIP+MG KFP +++EE+V+ +RE ER+ +H LD
Sbjct: 61 TLIWALQNTGGKKICLIHVHQPSQMIPLMGAKFPVGAVKEEEVRVFREKEREKVHMILDD 120
Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
L IC+Q GVRAEK+ E ES E GI++LIS GIRKLVMGAAAD+HY ++M DLKS+KA
Sbjct: 121 YLRICQQRGVRAEKMFIEMESIENGIVQLISELGIRKLVMGAAADRHYSRRMTDLKSRKA 180
Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPS--------FQASHNTENRHP 232
I VR++AP C IWF C G LI+TRE ++D + E +SP Q E+ H
Sbjct: 181 IFVRREAPTLCQIWFTCKGYLIHTREATMDDTESEYASPRPSISASDLLQTFSTPESEHQ 240
Query: 233 NCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDA 292
+ R QS T+ VQ L V N +++ S SD
Sbjct: 241 HISRVQS-----------TDSVQQL------------VSNGSSTEQS-------GRVSDG 270
Query: 293 EVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDG 352
+++DE S GS G +T+ S SS P DG
Sbjct: 271 SLNTDE---EERESDGS------------------EVTGSATVMSSGHSSPSSFP---DG 306
Query: 353 SVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
VDD+ ++ +A +EA +S++EAF E LRR KAEK+A+++IRRAK SES Y+EELKRRK
Sbjct: 307 -VDDSFNVKIRKATSEAHSSKQEAFAETLRRQKAEKNALDAIRRAKQSESAYSEELKRRK 365
Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
+ E A+A K +K + + +MEELQ A+ QK++LESQIA+SD T ++L QK+ AV+
Sbjct: 366 DTEIAVAKEKERFITIKNEQEVIMEELQSAMAQKAMLESQIAKSDGTMEKLNQKLDIAVK 425
Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDP 532
LLQ + E++ELQ ERD+A++EAEELR + +S+ +PQ+F+DFSFSEIE AT++FD
Sbjct: 426 LLQKLRDEREELQTERDRALREAEELRSHAE--TSTLQLPQYFTDFSFSEIEEATNHFDS 483
Query: 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+LKIGEGGYGSIY GLLRH QVAIKML+P+S QGP E+QQE+D+LSK+RHPN++TL+GAC
Sbjct: 484 TLKIGEGGYGSIYVGLLRHTQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGAC 543
Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
PE W+LVYEYLP GSLEDRL+CKDNSPPLSWQ R+RIATE+C+ L+FLHS K HS+VHGD
Sbjct: 544 PEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGD 603
Query: 653 LKPANILLDANFVSKLSDF---------------------------EFLASGELTPKSDV 685
LKPANILLD+N VSKLSDF E +SGELTPKSDV
Sbjct: 604 LKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDV 663
Query: 686 YSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE 745
YSFGIILLRLLTGRPAL I+ EV+YALD G L +LLDPLAGDWPFVQAEQLA LA+RCCE
Sbjct: 664 YSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCE 723
Query: 746 MSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAA 805
++RP+LG +VWRVLEPMRAS GGS+S+ LG E PPYF CPIFQEVMQDPHVAA
Sbjct: 724 TVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQEVMQDPHVAA 783
Query: 806 DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
DGFTYEAEA++ WLDS H+TSPMTN+ L+H +L+ N ALRSAIQEWLQ H
Sbjct: 784 DGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALRSAIQEWLQHH 833
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Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: - |
| >sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 342/514 (66%), Gaps = 27/514 (5%)
Query: 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
+AM + S R + EA ++ + + E++ +AKA E L +E +RK EE L KL
Sbjct: 295 KAMHDIGQSDRTVYGEAGKKWEEDASTTEALCKAKALEGLCIKESSQRKRLEELLEKEKL 354
Query: 424 ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDE 483
E++ + +Q++ M+ELQ+ + LESQ+ + KE +K +A+ELL+++++++DE
Sbjct: 355 EVKMVIEQNNGFMKELQMVQGRNLKLESQMRKLQDLEKEHGEKFDTAMELLKSFRQKRDE 414
Query: 484 LQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGS 543
++++ + AVKE LR+ K + S + D+SF EI AT+ FDPS K+GEG YGS
Sbjct: 415 IRIDHENAVKEVNALRRLVKGETGESSGSEML-DYSFMEINEATNEFDPSWKLGEGKYGS 473
Query: 544 IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYL 603
+YKG L+H+QVA+KML + EF++ ++ILS++RHPNLVTL+GACPE +L+Y+Y+
Sbjct: 474 VYKGNLQHLQVAVKMLPSYGSLNHFEFERRVEILSRVRHPNLVTLMGACPESRSLIYQYI 533
Query: 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
PNGSLED S ++N P LSW++RIRIA+E+CS L+FLHS P I+HG+LKP+ ILLD+N
Sbjct: 534 PNGSLEDCFSSENNVPALSWESRIRIASEICSALLFLHSNIP-CIIHGNLKPSKILLDSN 592
Query: 664 FVSKLSDF--------------------EFLASGELTPKSDVYSFGIILLRLLTGRPALG 703
V+K++D+ + S E+T +SD+Y+FGIILL+LLT RP G
Sbjct: 593 LVTKINDYGISQLIPIDGLDKSDPHVDPHYFVSREMTLESDIYAFGIILLQLLTRRPVSG 652
Query: 704 ITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763
I ++V+ AL+ + +LD AGDWP + ++LAN+A+RCC+ + +RP+L V R ++
Sbjct: 653 ILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMNRPDLAV-VLRFID 711
Query: 764 PMRA---SCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLD 820
M+A ++SY + R PP ++ CPIFQEVM+DP +AADGFTYEAEA++ WL
Sbjct: 712 RMKAPEVPSSETSSYANQNVPR-RPPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLA 770
Query: 821 SGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 854
+GH+TSPMTNL + NL+PN AL AIQ+W Q
Sbjct: 771 NGHDTSPMTNLKMEDCNLIPNHALHLAIQDWQNQ 804
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Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q0DR28|PUB57_ORYSJ U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica GN=PUB57 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 349 bits (896), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/399 (45%), Positives = 247/399 (61%), Gaps = 40/399 (10%)
Query: 482 DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGY 541
D+L+ ERD AV++ ELR S+H+ DFS ++E AT +F + ++G+ Y
Sbjct: 120 DQLKHERDNAVQQVNELR------DQSTHI---ILDFSRKDMEQATEHFKNAREVGDTEY 170
Query: 542 GSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYE 601
G YKG++ +M+V IK+ L FQQE+ IL + RHPN++T +G C EV LVYE
Sbjct: 171 GHTYKGMIHNMKVLIKLSSSQKL-----FQQEVSILRQWRHPNIITFIGVCSEVSALVYE 225
Query: 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661
+LPNG+LEDR+ C +NS PLSW R +I E+C L+FLHS K ++VHGDL+P NIL+D
Sbjct: 226 WLPNGNLEDRIICTNNSAPLSWYNRTQIIGEICCALLFLHSNKSTALVHGDLRPCNILID 285
Query: 662 ANFVSKLSDF-------------------------EFLASGELTPKSDVYSFGIILLRLL 696
AN+ SK+ +F EF +GELT SDVYS G+I+LRLL
Sbjct: 286 ANYRSKICNFGMSNLFLQLGTFPPNLTARLPYMDPEFNTTGELTTLSDVYSLGVIILRLL 345
Query: 697 TGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 756
TG P L ++++V AL + L L+D AGDWP+++A+QLA + + C M+RK RP+L
Sbjct: 346 TGMPPLTLSEKVAEALGSDSLHLLIDKSAGDWPYIEAKQLALIGLSCTGMTRKKRPDLLN 405
Query: 757 DVWRVLEPM-RASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEAL 815
+VW V+EP+ R + Y + P F CPI E+M+DP VA+DGFTYEAEA+
Sbjct: 406 EVWIVIEPLTRKPPAATWPYLQSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAI 465
Query: 816 KGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 854
+ W D G SPMTNL L + NLVPN LRS I +LQQ
Sbjct: 466 RCWFDRGISRSPMTNLALPNLNLVPNRVLRSFIHGYLQQ 504
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Possesses E3 ubiquitin-protein ligase in vitro. May be involved in cell death signaling. Oryza sativa subsp. japonica (taxid: 39947) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 349 bits (896), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 267/871 (30%), Positives = 416/871 (47%), Gaps = 127/871 (14%)
Query: 47 IYVAVAKQVKESKSVLLWALQ---NSGGKRICIIHVHTPAQMIPV-MGTKFPASSLEEEK 102
+ VA++ K SK V+ WA++ G ++H+H +P MG P S + ++
Sbjct: 22 VVVALSGSSK-SKYVVTWAIEKFATEGNVGFKLLHIHPMITSVPTPMGNAIPISEVRDDV 80
Query: 103 VQAYR-EIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMG 161
V AYR EI Q L R+ V E L ES++ I E ++ I ++V+G
Sbjct: 81 VTAYRQEILWQSEEMLKPYTKLFVRR-KVAVEVLVIESDNVAAAIAEEVTRDSIDRIVIG 139
Query: 162 AAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSF 221
++ + +K D+ S + P C ++ + G L R DG + I
Sbjct: 140 GSSRSFFSRKA-DICS----VISALMPNFCTVYVVSKGKLSCVRPSDSDG-NATIREDGS 193
Query: 222 QASHNTENRHPNCLRSQSVVLR----HNRPMKLTNPVQDLFHRVRSMNFDRNVG--NVMT 275
+ ++++ S V+ +RP+ L PV+ + H F G +V
Sbjct: 194 ERTNSSSGSSGPTSDSSDVMSSAHDSQSRPLSL--PVRRMQH------FPAIAGQASVPM 245
Query: 276 SQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTL 335
S+G + DAE + D + RS+ T+ S
Sbjct: 246 ETSSVGSDETRCMSLDAEEARDVSSINRSS-----------------------TDTTSRW 282
Query: 336 PPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIR 395
P + D Y++ +AM+ + +S RE R + +
Sbjct: 283 TPRRRD-----------------YEERKEAMSSS-SSNREYGNFGTRFSWSGMGVDTTHS 324
Query: 396 RAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAE 455
RA S ++ L + + + N E+E+++ + V E +A + ++ E
Sbjct: 325 RASQQASNMSDALSE-QSYTDNQVNLNFEVEKLRAELRHVQEMYAVAQTETFDASRKLGE 383
Query: 456 SDQ-------TAKELEQKIISAVELL----QNYKKEQDELQMERDKAVKEAEELRKSRKE 504
+Q +EL+ K A EL QN++K + + + R++A +E + R++ ++
Sbjct: 384 LNQRRLEEAIKLEELKLKEYEARELAEKEKQNFEKARRDAESMRERAEREIAQRREAERK 443
Query: 505 ASSSSH----------MPQF-FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ 553
++ + PQ + F++ EI AT +F LKIG G YG++YK L H
Sbjct: 444 SARDTKEKEKLEGTLGSPQLQYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHHTT 503
Query: 554 VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLS 613
+K+L Q +FQQE++ILSKIRHP+LV L+GACPE LVYEY+ NGSLEDRL
Sbjct: 504 AVVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPEQGALVYEYMENGSLEDRLF 563
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-- 671
+NSPPL W R RIA E+ + L+FLH KP I+H DLKPANILLD NFVSK+ D
Sbjct: 564 QVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGL 623
Query: 672 ------------------------------EFLASGELTPKSDVYSFGIILLRLLTGRPA 701
E+ +G ++ KSD+YSFG+ILL+LLT +PA
Sbjct: 624 STMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPA 683
Query: 702 LGITKEVQYALDTG-KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760
+ +T V+ A+D+ + +LD AG+WP + +LA LA+ C E+ K RP+L +
Sbjct: 684 IALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQILP 743
Query: 761 VLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLD 820
LE ++ + + G +PP +F CP+ ++VM +P VAADG+TY+ A++ WL
Sbjct: 744 ALENLKKVAEKARNSFSGVS--TQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK 801
Query: 821 SGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851
H TSPMT+ PL KNL+PN L +AI EW
Sbjct: 802 E-HNTSPMTDSPLHSKNLLPNYTLYTAIMEW 831
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Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 323 bits (827), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 244/413 (59%), Gaps = 46/413 (11%)
Query: 487 ERDKAVKEAEELRKSRKEASSSSH----MPQFFSDFSFSEIEGATHNFDPSLKIGEGGYG 542
ER +A AEE+RK ++ + Q + F + EI AT +F LKIG GGYG
Sbjct: 382 ERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIVEATSSFSDELKIGVGGYG 441
Query: 543 SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEY 602
S+Y+ L H VA+K+LH +F QE++ILSKIRHP+L+ L+GACPE +LVYEY
Sbjct: 442 SVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGSLVYEY 501
Query: 603 LPNGSLEDRLSCKD------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 656
+ NGSLE+RL + PPL W R RIA E+ S L FLH+ +P IVH DLKPA
Sbjct: 502 MHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPA 561
Query: 657 NILLDANFVSKLSDF-------------------------------EFLASGELTPKSDV 685
NILLD N VSK+ D E+ +G +TP+SD+
Sbjct: 562 NILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDI 621
Query: 686 YSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
Y+FGIILL+L+T R A+G+ ++ AL TGK +LD AGDWP +A+++ + +RC
Sbjct: 622 YAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRC 681
Query: 744 CEMSRKSRPELGKDVWRVLEPMR--ASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDP 801
EM ++ RP+LGK++ VLE ++ AS + + P +F CPI ++VM++P
Sbjct: 682 AEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVMENP 741
Query: 802 HVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 854
VA+DG+TYE A+K WL H+ SPMT+LP +L+PN +L SAI+EW Q
Sbjct: 742 CVASDGYTYEKRAIKEWLQKNHK-SPMTDLPFPSDSLLPNHSLLSAIKEWRSQ 793
|
Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 322 bits (826), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 268/487 (55%), Gaps = 59/487 (12%)
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
N E+E+++ + V E +A + ++ E +Q E +K++ E + K
Sbjct: 358 NLNFEIEKLRAELKHVQEMYAMAQTETVGASKKLTELNQRRFEESEKLVELKEKEEVAKD 417
Query: 480 EQDELQMERDKAVKEAEELR-----------------------KSRKEASSSSHMPQFFS 516
+ + ++A+KEAE+++ K + +AS S Q+
Sbjct: 418 TASKEKQRYEEAMKEAEKVKELMMKEALHRREAEFKAERDAREKDKLQASLVSPGVQY-Q 476
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI 576
+++ EI AT +F +LKIG G YGS+YK L H A+K+LH Q +F QE++I
Sbjct: 477 HYTWEEIAAATSDFAENLKIGIGAYGSVYKCNLHHTTGAVKVLHAGETQLSKQFDQELEI 536
Query: 577 LSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
LSKIRHP+LV L+GACPE LVYEY+ NGSL+DRL +++PP+ W R RIA E+ S
Sbjct: 537 LSKIRHPHLVLLLGACPERGCLVYEYMDNGSLDDRLMLVNDTPPIPWFERFRIALEVASA 596
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------------- 671
L+FLH KP I+H DLKP NILLD NFVSKL D
Sbjct: 597 LVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGT 656
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL-DTGKLKNLLDPL 724
E+ +G ++PKSDVYS G+++L+L+T +PA+ IT V+ A+ D + +LD
Sbjct: 657 LCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKK 716
Query: 725 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCE 784
AG WP +LA L + C EM R+ RP+L + LE +R + + L S
Sbjct: 717 AGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQN--LLSRTPSG 774
Query: 785 PPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLAL 844
PP +F CP+ + VM +P VAADG+TY+ EA++ WL +TSP+TNLPL +KNL+ N L
Sbjct: 775 PPSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQ-KDTSPVTNLPLPNKNLIANYTL 833
Query: 845 RSAIQEW 851
SAI EW
Sbjct: 834 YSAIMEW 840
|
Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 247/418 (59%), Gaps = 40/418 (9%)
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHN 529
E + ++E+ E R+ +K E ++ K SS P+ + +F++ EI AT +
Sbjct: 400 TEKFEQKRREEREAAQRREAEMKATHEAKEKEKLEESSLVAPKLQYQEFTWEEIINATSS 459
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
F LKIG G YG +YK L H A+K+LH +F QE++ILSKIRHP+LV L+
Sbjct: 460 FSEDLKIGMGAYGDVYKCNLHHTIAAVKVLHSAESSLSKQFDQELEILSKIRHPHLVLLL 519
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
GACP+ LVYEY+ NGSLEDRL ++S P+ W R+RIA E+ S L+FLH KP I+
Sbjct: 520 GACPDHGALVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVFLHKSKPTPII 579
Query: 650 HGDLKPANILLDANFVSKLSDF---------------------------------EFLAS 676
H DLKPANILL+ NFVSK+ D E+ +
Sbjct: 580 HRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRT 639
Query: 677 GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---KLKNLLDPLAGDWPFVQA 733
G ++PKSDVY+FG+I+L+LLTG+ A+ +T V+ A++ +L +LD AG+WP +
Sbjct: 640 GRISPKSDVYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEET 699
Query: 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 793
QLA LA++C E+ K RP+L + VLE ++ + + S +PP +F CP+
Sbjct: 700 RQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKARNSL--SAAPSQPPSHFFCPL 757
Query: 794 FQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851
++VM++P +AADG+TY+ A++ W++ H TSP+TN PL + NL+PN L +AI EW
Sbjct: 758 LKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLYAAIVEW 814
|
Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 211/368 (57%), Gaps = 35/368 (9%)
Query: 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEI 574
+ ++ EI AT F P IGEGGYG +Y+ L A+K++ + + EF +E+
Sbjct: 427 YRKYTIEEIVTATEGFSPEKVIGEGGYGKVYQCSLDSTPAAVKVVRLDTPEKKQEFLKEV 486
Query: 575 DILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
++LS++RHP++V L+GACPE LVYEYL NGSLE+ + + N PPL W R R+ E+
Sbjct: 487 EVLSQLRHPHVVLLLGACPENGCLVYEYLENGSLEEYIFHRKNKPPLPWFIRFRVIFEVA 546
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------- 671
L FLHS KP IVH DLKP NILL+ N+VSK++D
Sbjct: 547 CGLAFLHSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLA 606
Query: 672 --------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 723
E+ +G + PKSD+Y+FGII+L+LLT R GI V+ A+ G L +LD
Sbjct: 607 GTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTEMLDK 666
Query: 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERC 783
DWP + E+LA + ++C E + RP+L +V VL+ + S + GS R
Sbjct: 667 SVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRL-VETANSKVKKEGSNLRA 725
Query: 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 843
P ++ CPI +E+M++P +AADGFTYE +A+ WL+ H SP+T L H L PN
Sbjct: 726 --PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPNHT 782
Query: 844 LRSAIQEW 851
LRSAI++W
Sbjct: 783 LRSAIRDW 790
|
Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 270/517 (52%), Gaps = 58/517 (11%)
Query: 389 DAIESIRRAKASESLYAEELKR----------RKEFEEALANGKL-ELERMKKQHDEVME 437
+ +E +RR L +E R R E+ +L N ++ E E K+ E E
Sbjct: 243 EKLEYVRRKVNEAKLMIDEKSREVKVNAERSNRAEWAISLCNSRIGEFEAWIKEESERRE 302
Query: 438 ELQIALD-QKSLLE--SQIAESDQTA----KELEQKIISAVELLQNYKK----EQDELQM 486
+LQ LD K +E E +T EL++ + S V+ + K E + + +
Sbjct: 303 KLQATLDSDKECIEEAKNYVEKGKTKLHSLAELQEVLSSKVKTMMEAKSQAEVELERVVL 362
Query: 487 ERDKAVKEAEELRKSR----------KE-----ASSSSHMPQFFSDFSFSEIEGATHNFD 531
+R + + E E+LR R KE + S + + ++ +I AT +
Sbjct: 363 QRGEMITEIEKLRSQRDVFNRRIEFCKEREVIGSVSKEEVKCGYREYVAEDIRLATETYS 422
Query: 532 PSLKIGEGG-YGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
L++ GG + ++Y+G ++H VA+K++ SL + F ++ +L++IRHPNLV + G
Sbjct: 423 DRLRLKSGGNWTNVYRGRIKHTTVAVKVI-GDSLSDEA-FGAKVKLLNEIRHPNLVAIAG 480
Query: 591 ACPEV-WTLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKP 645
C + L++EY+ NG+L D L S L W RIRIA ++CS L FLHS KP
Sbjct: 481 FCSQRPKCLLFEYMHNGNLRDNLFTSQRKSRRSKILKWHDRIRIAHQVCSGLGFLHSVKP 540
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEFLA-SGELTPKSDVYSFGIILLRLLTGRPALGI 704
IVHG L P+ ILLD N V K++ F + S + K DV +FG++LL LLTGR G+
Sbjct: 541 KPIVHGRLTPSKILLDRNLVPKITGFGLIMHSDQSDTKPDVMAFGVLLLHLLTGRNWHGL 600
Query: 705 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG-KDVWRVLE 763
K + +++ + LD AG WP A++ LA++C ++R + K++ L
Sbjct: 601 LKAM--SMNQTSILRDLDQTAGKWPLELAKEFGALAVKCSSVNRGGNMDFSTKEIMEELG 658
Query: 764 PMRASC------GG---STSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEA 814
+R GG +T+ + + + P F CPI QEVM++PHVAADGF+YE EA
Sbjct: 659 KIREKADEFKTKGGYEEATNSNMDEGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEA 718
Query: 815 LKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851
++ WL GH+TSPMTNL L ++ L PN LRS IQ+W
Sbjct: 719 IQEWLSMGHDTSPMTNLRLDYQMLTPNHTLRSLIQDW 755
|
Functions as an E3 ubiquitin ligase. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 162/297 (54%), Gaps = 42/297 (14%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIK 557
RK + +S S M +++ E+ T+NF+ L GEGG+G +Y G + + QVA+K
Sbjct: 562 RKKKPSKASRSSMVANKRSYTYEEVAVITNNFERPL--GEGGFGVVYHGNVNDNEQVAVK 619
Query: 558 MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCK 615
+L S QG +F+ E+D+L ++ H NLVTLVG C E L+YEY+ NG+L+ LS +
Sbjct: 620 VLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGE 679
Query: 616 DNSPPLSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKLSDF--- 671
++ PLSW+ R+RIA E L +LH CKP ++H D+K NILLD NF +KL DF
Sbjct: 680 NSRSPLSWENRLRIAAETAQGLEYLHIGCKP-PMIHRDIKSMNILLDNNFQAKLGDFGLS 738
Query: 672 ------------------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE 707
E+ + LT KSDV+SFG++LL ++T +P + T+E
Sbjct: 739 RSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTRE 798
Query: 708 -------VQYALDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 756
V + L G +KN++DP + GD+ + LAM C S RP + +
Sbjct: 799 KSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQ 855
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 855 | ||||||
| 359489801 | 881 | PREDICTED: U-box domain-containing prote | 0.980 | 0.951 | 0.646 | 0.0 | |
| 147772798 | 881 | hypothetical protein VITISV_015820 [Viti | 0.981 | 0.952 | 0.642 | 0.0 | |
| 224064033 | 809 | predicted protein [Populus trichocarpa] | 0.906 | 0.957 | 0.668 | 0.0 | |
| 87240964 | 884 | Protein kinase; U box [Medicago truncatu | 0.983 | 0.951 | 0.619 | 0.0 | |
| 357507363 | 896 | U-box domain-containing protein [Medicag | 0.983 | 0.938 | 0.619 | 0.0 | |
| 356568394 | 883 | PREDICTED: U-box domain-containing prote | 0.983 | 0.952 | 0.618 | 0.0 | |
| 224127680 | 810 | predicted protein [Populus trichocarpa] | 0.893 | 0.943 | 0.633 | 0.0 | |
| 356531997 | 883 | PREDICTED: U-box domain-containing prote | 0.983 | 0.952 | 0.614 | 0.0 | |
| 356522608 | 879 | PREDICTED: U-box domain-containing prote | 0.976 | 0.949 | 0.599 | 0.0 | |
| 356506214 | 877 | PREDICTED: U-box domain-containing prote | 0.980 | 0.955 | 0.589 | 0.0 |
| >gi|359489801|ref|XP_002274993.2| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera] gi|297745303|emb|CBI40383.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/896 (64%), Positives = 693/896 (77%), Gaps = 58/896 (6%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEE-PVASVIEDKIYVAVAKQVKESK 59
MA+VS VPAI+Q +D VR +I ++ + SS IVEE P+A V+EDKI+VAV K+VKESK
Sbjct: 1 MAVVSPVPAISQQLDHVRLHEIGVSAVMSSTGEIVEEQPLALVVEDKIFVAVGKEVKESK 60
Query: 60 SVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119
S+L+WALQNSGGKRI I+HVH PAQMIP+MG KFPAS L+E++V+AYR++ERQDMH L+
Sbjct: 61 SILVWALQNSGGKRISIVHVHQPAQMIPIMGGKFPASKLKEQEVKAYRDLERQDMHKILN 120
Query: 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 179
LLICR+ GVRAEKL ESE+ EKGILELIS +GI+KLV+GAAADKHY ++M++ KSKK
Sbjct: 121 DYLLICRKAGVRAEKLYIESENVEKGILELISEHGIKKLVVGAAADKHYSRRMLEPKSKK 180
Query: 180 AISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSP-SFQASHNTENRHPNCLRSQ 238
A VR +AP CHIWF+C G+LIYTREGSL+G D E+ +P S QAS N E N RS
Sbjct: 181 AAYVRDKAPLFCHIWFVCRGHLIYTREGSLNGADIELRTPPSQQASPNNETGQSNTFRSM 240
Query: 239 SVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSD- 297
SV L N P KL NP QDL R+M+ + V++S D GG+S+P SR E SSD
Sbjct: 241 SVSLGQNHPSKLVNPGQDL---PRTMSVPVRI-TVLSSPDGTGGVSAPWSRMGREGSSDY 296
Query: 298 -ECTTGRSTSQGS-LSSCSSRGVIDVAMIPLIRTEGVSTL--PPSKEDLQ-SSPPSVLDG 352
+ + RS SQ S S+CSS M + +G+ + P +K+ L SSPPSVL+
Sbjct: 297 WDGISKRSPSQASGFSTCSSGD-----MAGEVNEDGLESRASPVAKQALHHSSPPSVLE- 350
Query: 353 SVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
+N+YDQL QAM EAENSRREAF+E+LRR KAEKDAIE+IRRAK +E ++EELK R+
Sbjct: 351 ---ENIYDQLEQAMVEAENSRREAFQESLRRSKAEKDAIEAIRRAKEAERSFSEELKLRR 407
Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
+ EEAL ELE ++ + E+MEEL+I+L+ KSLLE+QIA+S+Q KELE+KII+AVE
Sbjct: 408 DIEEALQAQGKELESLRNKQQEIMEELKISLNHKSLLENQIADSEQVVKELEEKIIAAVE 467
Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDP 532
LLQNYKKE+DELQ+ERD A+K AEEL+K + +S+SH PQ+F++FSF+EIE AT NFDP
Sbjct: 468 LLQNYKKERDELQIERDNAIKTAEELKK---KGASTSHTPQYFAEFSFAEIEKATQNFDP 524
Query: 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
S+KIGEGGYGSIYKG LRH QVAIKMLH S QGP+EFQQE+DILSK+RHPNLVTL+GAC
Sbjct: 525 SVKIGEGGYGSIYKGCLRHTQVAIKMLHSDSFQGPTEFQQEVDILSKLRHPNLVTLIGAC 584
Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
PE W L+YEYLPNGSLEDRL+C+DN+PPLSWQ RIRIA ELCSVLIFLHS P SIVHGD
Sbjct: 585 PEAWALIYEYLPNGSLEDRLNCRDNTPPLSWQARIRIAAELCSVLIFLHSNNPDSIVHGD 644
Query: 653 LKPANILLDANFVSKLSDF---------------------------------EFLASGEL 679
LKP+NILLDANF SKLSDF EFL+SGEL
Sbjct: 645 LKPSNILLDANFGSKLSDFGICRVISHDGNSSNSATMCCRTGPKGTFAYMDPEFLSSGEL 704
Query: 680 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739
T KSDVYSFGIILLRLLTG+PA+GITKEVQ+ALD G L LLDPLAGDWPFVQA+QLA +
Sbjct: 705 TVKSDVYSFGIILLRLLTGKPAIGITKEVQHALDQGNLNTLLDPLAGDWPFVQAKQLALM 764
Query: 740 AMRCCEMSRKSRPELGKDVWRVLEPMRASCGG-STSYRLGSEERCEPPPYFTCPIFQEVM 798
A+RCCEM+RKSRP+L +VWRVLEPM+ SCG S+S+R+GSEER + PPYF CPIFQE+M
Sbjct: 765 ALRCCEMNRKSRPDLVSEVWRVLEPMKVSCGASSSSFRVGSEERGQIPPYFICPIFQEIM 824
Query: 799 QDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 854
QDP VAADGFTYEAEAL+GWLD GH TSPMTNL L H NLVPN ALRSAIQEWLQQ
Sbjct: 825 QDPCVAADGFTYEAEALRGWLDGGHSTSPMTNLKLGHLNLVPNRALRSAIQEWLQQ 880
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147772798|emb|CAN67166.1| hypothetical protein VITISV_015820 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/895 (64%), Positives = 687/895 (76%), Gaps = 56/895 (6%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEE-PVASVIEDKIYVAVAKQVKESK 59
MA+VS VPAI+Q +D VR +I ++ + SS IVEE P+A V+EDKI+VAV K+VKESK
Sbjct: 1 MAVVSPVPAISQQLDHVRLHEIGVSAVMSSTGEIVEEQPLALVVEDKIFVAVGKEVKESK 60
Query: 60 SVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119
S+L+WALQNSGGKRI I+HVH PAQMIP+MG KFPAS L+E++V+AYR++ERQDMH L+
Sbjct: 61 SILVWALQNSGGKRISIVHVHQPAQMIPIMGGKFPASKLKEQEVKAYRDLERQDMHKILN 120
Query: 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 179
+LICR+ GVRAEKL ESE+ EKGILELIS +GI+KLV+GAAADKHY ++M++ KSKK
Sbjct: 121 DYILICRKAGVRAEKLYIESENVEKGILELISEHGIKKLVVGAAADKHYSRRMLEPKSKK 180
Query: 180 AISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSP-SFQASHNTENRHPNCLRSQ 238
A VR +AP CHIWF+C G+LIYTREGS BG D E+ +P S QAS N E N RS
Sbjct: 181 AAYVRDKAPLFCHIWFVCRGHLIYTREGSXBGADIELRTPPSQQASPNNETGQSNTFRSM 240
Query: 239 SVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSD- 297
SV L N KL NP QDL R+M+ + V++S D GG+S+P SR E SSD
Sbjct: 241 SVSLGQNHXSKLVNPGQDL---PRTMSVPVRI-TVLSSPDGTGGVSAPWSRMGREGSSDY 296
Query: 298 -ECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTL--PPSKEDLQ-SSPPSVLDGS 353
+ + RS SQ S S S G M + +G+ + P +K+ L SSPPSVL+
Sbjct: 297 WDGISKRSPSQXSGFSXCSSG----DMAGEVNEDGLESRASPXAKQALHHSSPPSVLE-- 350
Query: 354 VDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE 413
+N+YDQL QAM EAENSRREAF+E+LRR KAEK AIE+IRRAK +E ++EELK R++
Sbjct: 351 --ENIYDQLEQAMVEAENSRREAFQESLRRSKAEKXAIEAIRRAKEAERSFSEELKLRRD 408
Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
EEAL ELE ++ + E+MEEL+I+L+ KSLLE+QIA+S+Q KELE+KIISAVEL
Sbjct: 409 IEEALQAQGKELESLRNKQQEIMEELKISLNHKSLLENQIADSEQVVKELEEKIISAVEL 468
Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPS 533
LQNYKKE+DELQ+ERD A+K AEEL+K + +S+SH PQ+F++FSF+EIE AT NFDPS
Sbjct: 469 LQNYKKERDELQIERDNAIKTAEELKK---KGASTSHTPQYFAEFSFAEIEKATQNFDPS 525
Query: 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
+KIGEGGYGSIYKG LRH QVAIKMLH S QGPSEFQQE+DILSK+RHPNLVTL+GACP
Sbjct: 526 VKIGEGGYGSIYKGCLRHTQVAIKMLHSDSFQGPSEFQQEVDILSKLRHPNLVTLIGACP 585
Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
E W L+YEYLPNGSLEDRL+C+DN+PPLSWQ RIRIA ELCSVLIFLHS P SIVHGDL
Sbjct: 586 EAWALIYEYLPNGSLEDRLNCRDNTPPLSWQARIRIAAELCSVLIFLHSNNPDSIVHGDL 645
Query: 654 KPANILLDANFVSKLSDF---------------------------------EFLASGELT 680
KP+NILLDANF SKLSDF EFL+SGELT
Sbjct: 646 KPSNILLDANFGSKLSDFGICRVISHDGNSSNSATMCCRTGPKGTFAYMDPEFLSSGELT 705
Query: 681 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740
KSDVYSFGIILLRLLTG+PA+GITKEVQ+ALD G L LLDPLAGDWPFVQA+QLA +A
Sbjct: 706 VKSDVYSFGIILLRLLTGKPAIGITKEVQHALDQGNLNTLLDPLAGDWPFVQAKQLALMA 765
Query: 741 MRCCEMSRKSRPELGKDVWRVLEPMRASCGG-STSYRLGSEERCEPPPYFTCPIFQEVMQ 799
+RC EM+RKSRP+L +VWRVLEPM+ SCG S+S+R+GSEER + PPYF CPIFQE+MQ
Sbjct: 766 LRCXEMNRKSRPDLVSEVWRVLEPMKVSCGASSSSFRVGSEERGQIPPYFICPIFQEIMQ 825
Query: 800 DPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 854
DP VAADGFTYEAEAL+GWLD GH TSPMTNL L H NLVPN ALRSAIQEWLQQ
Sbjct: 826 DPCVAADGFTYEAEALRGWLDGGHSTSPMTNLKLGHLNLVPNRALRSAIQEWLQQ 880
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064033|ref|XP_002301358.1| predicted protein [Populus trichocarpa] gi|222843084|gb|EEE80631.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/858 (66%), Positives = 652/858 (75%), Gaps = 83/858 (9%)
Query: 30 SRRGIVEEPVASVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVM 89
S R IVEEPVA VIEDKI+VAV K VKE K +LLWALQNSGGKRICIIHV P+QMIP+M
Sbjct: 3 SGREIVEEPVARVIEDKIFVAVGKSVKECKLMLLWALQNSGGKRICIIHVLQPSQMIPLM 62
Query: 90 GTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILEL 149
GTKF AS+L+E++V+AYRE+ERQ MH LD L ICR+MGVRAEKL E ES EKGILEL
Sbjct: 63 GTKFRASALKEQEVRAYREVERQAMHKMLDEYLSICRKMGVRAEKLYVEMESIEKGILEL 122
Query: 150 ISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTREGSL 209
ISH+GI+KLVMGAAADK + K MMD+KSKKAISV QAPASCHIWFIC G+LI+TREG+L
Sbjct: 123 ISHHGIKKLVMGAAADKRHSKNMMDIKSKKAISVCLQAPASCHIWFICKGHLIHTREGAL 182
Query: 210 DGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRN 269
DG ++ S S Q S +TE + +RSQS+ L N +KLTNP QDL RVRSMN +
Sbjct: 183 DGTGTDVGSSSQQTSPHTEAGQLSHMRSQSIALGQNHFVKLTNPAQDLVRRVRSMNVNGR 242
Query: 270 VGNVMTSQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRT 329
G LS+PAS
Sbjct: 243 GGR----------LSTPAS----------------------------------------P 252
Query: 330 EGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKD 389
+G + P S+ D S DGS +D LYDQL +AM++AENSRREAFEEA+RR KAEK
Sbjct: 253 DGGPSTPSSRSDADGSSDEYDDGSTEDPLYDQLEKAMSDAENSRREAFEEAVRRAKAEKY 312
Query: 390 AIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLL 449
A E+ R+AKASE+LY EE KRRKE EE LA K ELER+ ++ DEVMEEL+IA DQKSLL
Sbjct: 313 AFEATRKAKASENLYTEESKRRKEVEEELAKEKEELERINRECDEVMEELRIAEDQKSLL 372
Query: 450 ESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSS 509
E QI ESDQ KELEQKIISAV LLQNYKKEQDELQ ERD A+KE EELR+S+ EAS +
Sbjct: 373 EKQIKESDQMVKELEQKIISAVGLLQNYKKEQDELQKERDNALKEVEELRRSQTEASGT- 431
Query: 510 HMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE 569
HM QFFS+FS SEIE AT +FDPSLKIGEGGYGSIYKG+LR QVA+KMLH +SLQGP+E
Sbjct: 432 HMSQFFSEFSLSEIEEATQHFDPSLKIGEGGYGSIYKGVLRQTQVAVKMLHSNSLQGPAE 491
Query: 570 FQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI 629
FQQE+D+LSK+RHPNL+TL+GACPE WTL+YEYLPNGSLEDRLSC+DNSPPLSWQTRIRI
Sbjct: 492 FQQEVDVLSKMRHPNLITLIGACPEAWTLIYEYLPNGSLEDRLSCRDNSPPLSWQTRIRI 551
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
A ELCSVLIFLHS K HSIVHGDLKPANILLD NFV+KLSDF
Sbjct: 552 AAELCSVLIFLHSSKQHSIVHGDLKPANILLDENFVTKLSDFGICRLLHHKEGSSNNTAI 611
Query: 672 --------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL 717
EFL++GELTPKSDVYSFGIILLRLLT R LGITKEVQ LD G L
Sbjct: 612 CRTDPKGTFSYMDPEFLSTGELTPKSDVYSFGIILLRLLTARQPLGITKEVQCELDKGNL 671
Query: 718 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRL 777
K LLDPLAGDWPFVQAEQLA+LA+RCCEMSRK+RP+L +VWRVLEPM+ASCGGS+ ++L
Sbjct: 672 KTLLDPLAGDWPFVQAEQLAHLALRCCEMSRKNRPDLLSEVWRVLEPMKASCGGSSFFQL 731
Query: 778 GSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKN 837
GSEE +PP YF CPIFQEVM+DPHVAADG+TYEAEALKGWLDSGH+TSPMTNL LAH++
Sbjct: 732 GSEEHFQPPSYFICPIFQEVMRDPHVAADGYTYEAEALKGWLDSGHDTSPMTNLKLAHRD 791
Query: 838 LVPNLALRSAIQEWLQQH 855
L+PN ALRSAIQEWLQQ
Sbjct: 792 LIPNRALRSAIQEWLQQQ 809
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|87240964|gb|ABD32822.1| Protein kinase; U box [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/898 (61%), Positives = 671/898 (74%), Gaps = 57/898 (6%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
MA+VSS+PA Q SV + + R I EEP V+++ I VAV+K VKESK
Sbjct: 1 MAVVSSMPATIQRTGSV-------SSVRDVRGEIEEEPNQIVVDEVICVAVSKDVKESKL 53
Query: 61 VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
L+WA+QNSGGK+ICI+ VH PA MIP+MG KFPASSL++++V+AYRE+ERQ++H LD
Sbjct: 54 NLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVRAYREMERQNVHKTLDE 113
Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
L IC++MGVRAEKL E E+ EKGI+ELIS +GIRKL+MGAA+DK+Y ++MMDL+S+KA
Sbjct: 114 YLRICQRMGVRAEKLHIEMENIEKGIIELISQHGIRKLIMGAASDKNYSRRMMDLRSRKA 173
Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
I V +QAP+SCHI FIC G+LI+TR+ SLD + E++SP Q N+ P+ RSQS+
Sbjct: 174 IYVCEQAPSSCHIQFICKGHLIHTRDRSLDERNVEVASPLLQQGPNSV--RPS--RSQSI 229
Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIG--GLSSPASRSDAEVSSDE 298
L N + Q+LF RVRS N D ++ T+ + G S+P +R EVSSDE
Sbjct: 230 TLGQNHRTNSISSSQELFRRVRSAN-DGMTASITTNSSPVDNEGFSTPRNRRGTEVSSDE 288
Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPS----KEDLQS-SPPSVL 350
TS LS+ S ID + P E S L S EDL+ SPPSVL
Sbjct: 289 SDRLSRTSPSGLSTFSD-STIDPTLTPYSVAESCENASDLTLSHLIKDEDLRHLSPPSVL 347
Query: 351 DGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR 410
DG V+D LYDQL QAM+EA N+ R A++E RRGKAEKDAIE+IRRAKASESLY +EL
Sbjct: 348 DGGVNDTLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTDELNL 407
Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
RK EE L K ELE + Q D+V EEL++A+D KS LESQ+A S+ +ELEQKIISA
Sbjct: 408 RKMAEEELRKEKEELESVTSQRDKVNEELRLAVDLKSSLESQLASSEVMIQELEQKIISA 467
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
VELLQ+YK E+DELQ++RD A++EAE+LRK + E SS+ H+PQ FS+FSFSEIE AT NF
Sbjct: 468 VELLQSYKNERDELQIQRDNALREAEDLRKKQGEGSST-HVPQLFSEFSFSEIEEATSNF 526
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+PSLKIGEGGYG+IYKGLLRH +VAIK+LH +S+QGP EFQQE+D+LSK+RHPNL+TL+G
Sbjct: 527 NPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIG 586
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
ACPE W+LVYEYLPNGSLEDRL+CKDN+ PLSWQTRIRIA ELCS LIFLHS KPHSIVH
Sbjct: 587 ACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVH 646
Query: 651 GDLKPANILLDANFVSKLSDF---------------------------------EFLASG 677
GDLKP+NI+LD N VSKLSDF EFLASG
Sbjct: 647 GDLKPSNIILDGNLVSKLSDFGICRVLSNYENSSNNNTQFWKTDPKGTFVYMDPEFLASG 706
Query: 678 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
ELTPKSDVYSFGIILLRLLTGRPALGITKEV+YA+DTGKL +LLDPLAGDWPFVQAEQLA
Sbjct: 707 ELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLA 766
Query: 738 NLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEV 797
LA+RCCEM+RKSRP+L DVWR+L+ MRAS GG+ S+ L SE +PP YF CPIFQEV
Sbjct: 767 RLALRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEV 826
Query: 798 MQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
M+DPHVAADGFTYEAEA++GWLDSGH+ SPMTN L+H+NLVPN ALRSAIQ+WLQ H
Sbjct: 827 MRDPHVAADGFTYEAEAIRGWLDSGHDASPMTNSTLSHQNLVPNRALRSAIQDWLQSH 884
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507363|ref|XP_003623970.1| U-box domain-containing protein [Medicago truncatula] gi|355498985|gb|AES80188.1| U-box domain-containing protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/898 (61%), Positives = 671/898 (74%), Gaps = 57/898 (6%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
MA+VSS+PA Q SV + + R I EEP V+++ I VAV+K VKESK
Sbjct: 13 MAVVSSMPATIQRTGSV-------SSVRDVRGEIEEEPNQIVVDEVICVAVSKDVKESKL 65
Query: 61 VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
L+WA+QNSGGK+ICI+ VH PA MIP+MG KFPASSL++++V+AYRE+ERQ++H LD
Sbjct: 66 NLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVRAYREMERQNVHKTLDE 125
Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
L IC++MGVRAEKL E E+ EKGI+ELIS +GIRKL+MGAA+DK+Y ++MMDL+S+KA
Sbjct: 126 YLRICQRMGVRAEKLHIEMENIEKGIIELISQHGIRKLIMGAASDKNYSRRMMDLRSRKA 185
Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
I V +QAP+SCHI FIC G+LI+TR+ SLD + E++SP Q N+ P+ RSQS+
Sbjct: 186 IYVCEQAPSSCHIQFICKGHLIHTRDRSLDERNVEVASPLLQQGPNSV--RPS--RSQSI 241
Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIG--GLSSPASRSDAEVSSDE 298
L N + Q+LF RVRS N D ++ T+ + G S+P +R EVSSDE
Sbjct: 242 TLGQNHRTNSISSSQELFRRVRSAN-DGMTASITTNSSPVDNEGFSTPRNRRGTEVSSDE 300
Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPS----KEDLQS-SPPSVL 350
TS LS+ S ID + P E S L S EDL+ SPPSVL
Sbjct: 301 SDRLSRTSPSGLSTFSD-STIDPTLTPYSVAESCENASDLTLSHLIKDEDLRHLSPPSVL 359
Query: 351 DGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR 410
DG V+D LYDQL QAM+EA N+ R A++E RRGKAEKDAIE+IRRAKASESLY +EL
Sbjct: 360 DGGVNDTLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTDELNL 419
Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
RK EE L K ELE + Q D+V EEL++A+D KS LESQ+A S+ +ELEQKIISA
Sbjct: 420 RKMAEEELRKEKEELESVTSQRDKVNEELRLAVDLKSSLESQLASSEVMIQELEQKIISA 479
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
VELLQ+YK E+DELQ++RD A++EAE+LRK + E SS+ H+PQ FS+FSFSEIE AT NF
Sbjct: 480 VELLQSYKNERDELQIQRDNALREAEDLRKKQGEGSST-HVPQLFSEFSFSEIEEATSNF 538
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+PSLKIGEGGYG+IYKGLLRH +VAIK+LH +S+QGP EFQQE+D+LSK+RHPNL+TL+G
Sbjct: 539 NPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIG 598
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
ACPE W+LVYEYLPNGSLEDRL+CKDN+ PLSWQTRIRIA ELCS LIFLHS KPHSIVH
Sbjct: 599 ACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVH 658
Query: 651 GDLKPANILLDANFVSKLSDF---------------------------------EFLASG 677
GDLKP+NI+LD N VSKLSDF EFLASG
Sbjct: 659 GDLKPSNIILDGNLVSKLSDFGICRVLSNYENSSNNNTQFWKTDPKGTFVYMDPEFLASG 718
Query: 678 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
ELTPKSDVYSFGIILLRLLTGRPALGITKEV+YA+DTGKL +LLDPLAGDWPFVQAEQLA
Sbjct: 719 ELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLA 778
Query: 738 NLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEV 797
LA+RCCEM+RKSRP+L DVWR+L+ MRAS GG+ S+ L SE +PP YF CPIFQEV
Sbjct: 779 RLALRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEV 838
Query: 798 MQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
M+DPHVAADGFTYEAEA++GWLDSGH+ SPMTN L+H+NLVPN ALRSAIQ+WLQ H
Sbjct: 839 MRDPHVAADGFTYEAEAIRGWLDSGHDASPMTNSTLSHQNLVPNRALRSAIQDWLQSH 896
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568394|ref|XP_003552396.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/897 (61%), Positives = 665/897 (74%), Gaps = 56/897 (6%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
MA+VS +PA Q + SVR ++ + +EEP SV++ IYVAV K+VKES+
Sbjct: 1 MAVVSPMPATTQRMGSVR-------SLSDAGGKFLEEPNPSVVDQPIYVAVTKEVKESRL 53
Query: 61 VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
L+WA+QNSGGKRICI++VH A M+P++G KFPAS+L+EE+VQAY E ERQ MH LD
Sbjct: 54 NLIWAIQNSGGKRICILYVHVRATMVPLLGGKFPASALKEEQVQAYWEEERQGMHRILDD 113
Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
L IC++MGVRAEKL E +S EKGILELIS +GI+KLVMGAA+DK+Y ++MMDLKSKKA
Sbjct: 114 YLRICQRMGVRAEKLHIEMDSIEKGILELISQHGIQKLVMGAASDKYYNRRMMDLKSKKA 173
Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
ISV +QAPASCHI F+C G LI+TR+ S + + +++SP Q N+ LRSQSV
Sbjct: 174 ISVCKQAPASCHIQFVCKGRLIHTRDRSSNEGNADVTSPLVQQVPNS----VRSLRSQSV 229
Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMT--SQDSIGGLSSPASRSDAEVSSDE 298
L +R LTNP +LF RVRS N D + + MT S + G S+P R EVSSDE
Sbjct: 230 TLGQDRRANLTNPALELFRRVRSAN-DGHGASFMTVSSPEDTEGFSTPHDRMGTEVSSDE 288
Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPSK---EDLQ-SSPPSVLD 351
S LS+CS V ++A P + +E L S+ EDL SSPPS LD
Sbjct: 289 SDRLSRMSPSGLSTCSDSAV-ELAFTPSLINESSENALELTLSRRIIEDLHYSSPPSTLD 347
Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
G +DD +Y+QL QA AEAEN+ A++E +RR KAEKDA E+IR+ KASESLY EEL R
Sbjct: 348 GGMDDTIYEQLEQARAEAENATLNAYQETVRRRKAEKDAFEAIRKVKASESLYTEELNLR 407
Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
K EE L K ELE MK D+V EEL +ALDQK LESQIA S+ KELEQKI+SAV
Sbjct: 408 KMTEEKLRKEKEELESMKSLRDKVKEELCLALDQKESLESQIASSELMVKELEQKILSAV 467
Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFD 531
+LLQ+YK E+DELQM+RD A++EAEELRK + EAS + ++PQ FS+FSFSEI+ AT NF+
Sbjct: 468 DLLQSYKNERDELQMQRDNALREAEELRKKQGEASGT-NVPQLFSEFSFSEIKEATSNFN 526
Query: 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
PS KIGEGGYGSI+KG+LRH +VAIKML+ S+QGP EFQQE+D+LSK+RHPNL+TL+GA
Sbjct: 527 PSSKIGEGGYGSIFKGVLRHTEVAIKMLNSDSMQGPLEFQQEVDVLSKLRHPNLITLIGA 586
Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
CP+ W LVYEYLPNGSLEDRL+CK+N+PPLSWQ RIRIA ELCS LIFLHS KPHS+VHG
Sbjct: 587 CPDSWALVYEYLPNGSLEDRLACKNNTPPLSWQARIRIAAELCSALIFLHSSKPHSVVHG 646
Query: 652 DLKPANILLDANFVSKLSDF---------------------------------EFLASGE 678
DLKP+NILLDAN +SKLSDF EFLASGE
Sbjct: 647 DLKPSNILLDANLISKLSDFGICRILSNCESSSSNTTEFWRTDPKGTFVYMDPEFLASGE 706
Query: 679 LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
LTPKSDVYSFGIILLRLLTGRPALGITKEV+YALDTGKLK+LLDPLAGDWPFVQAEQLA
Sbjct: 707 LTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTGKLKSLLDPLAGDWPFVQAEQLAR 766
Query: 739 LAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVM 798
LA+RCC+M+RKSRP+L DVWRVL+ MR S GG+ S+ L SE +PP YF CPIFQEVM
Sbjct: 767 LALRCCDMNRKSRPDLYSDVWRVLDAMRVSSGGANSFGLSSEGLLQPPSYFICPIFQEVM 826
Query: 799 QDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
+DPHVAADGFTYEAEA++GWLD GH+ SPMTN LAH NLVPN ALRSAIQ+WLQ H
Sbjct: 827 RDPHVAADGFTYEAEAIRGWLDGGHDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 883
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127680|ref|XP_002320134.1| predicted protein [Populus trichocarpa] gi|222860907|gb|EEE98449.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1051 bits (2718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/863 (63%), Positives = 635/863 (73%), Gaps = 99/863 (11%)
Query: 29 SSRRGIVEEPVA---SVIEDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQM 85
+S R +VEE VA VIE+KI+VAV K VKE KS+L WALQ SGGKRICIIHVH PAQM
Sbjct: 2 ASGREVVEETVARVIEVIEEKIFVAVGKSVKECKSMLFWALQKSGGKRICIIHVHQPAQM 61
Query: 86 IPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKG 145
IP MGTKFPAS L+E++V+AY EIERQ+M L L +CR+MGVRAEKL E ES EKG
Sbjct: 62 IPFMGTKFPASKLKEQEVRAYWEIERQEMLKMLGEYLFLCRKMGVRAEKLYVEMESIEKG 121
Query: 146 ILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNGNLIYTR 205
ILELIS +GIRKLVMGAAADK Y K MMD+KSKKA+SV QAPASCHIWFIC G+LI TR
Sbjct: 122 ILELISQHGIRKLVMGAAADKRYSKNMMDIKSKKAVSVCLQAPASCHIWFICKGHLIQTR 181
Query: 206 EGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMN 265
+G+LDG D ++ S Q S NTE N +RSQS++ + +KLTNP QDLF ++ +
Sbjct: 182 KGALDGTDTDVRPSSQQKSPNTEAGQSNIMRSQSILFGQHHHVKLTNPAQDLFRKMEGLQ 241
Query: 266 FDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIP 325
R G + T +I
Sbjct: 242 LHR--GQMQTG---------------------------------------------VLIN 254
Query: 326 LIRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGK 385
++R +GV LP +Q S DGS++D LYDQL QAMAEAENSR EA EEA+R K
Sbjct: 255 MMRYQGV--LP----KIQFSHH---DGSIEDPLYDQLEQAMAEAENSRFEASEEAVRCAK 305
Query: 386 AEKDAIESIRRAKASESLYAEELKRR-------KEFEEALANGKLELERMKKQHDEVMEE 438
E+D +E+IR+AKASESLY EE KRR + +E L ELE++ K+ DEVM E
Sbjct: 306 EERDVVEAIRKAKASESLYTEESKRRTVVEEELAKEKEELEKINKELEKINKEQDEVMGE 365
Query: 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
L IA D KSLLE QI ESD+ KELEQKIISAV LLQNYKKE+D L RD A+KEAEEL
Sbjct: 366 LCIAQDHKSLLEKQIEESDEMVKELEQKIISAVGLLQNYKKERDHLHKGRDYALKEAEEL 425
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKM 558
R+++ EASS+ HMP+FFSDFSFSEIE ATH+FDPS KIGEGGYG+IYKG+LR QVA+KM
Sbjct: 426 RRNQTEASST-HMPRFFSDFSFSEIEEATHHFDPSRKIGEGGYGNIYKGVLRQTQVAVKM 484
Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNS 618
L +S+QGP+EFQQE+++LSK+RHPNL+TLVGACPE WTL+YEYLPNGSLEDRLSCKDNS
Sbjct: 485 LDSNSMQGPAEFQQEVNVLSKMRHPNLITLVGACPEAWTLIYEYLPNGSLEDRLSCKDNS 544
Query: 619 PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------- 671
PPLSWQTRIRIATELCSVLIFLHS KPHSIVHGDLKPANILLD NFV+KLSDF
Sbjct: 545 PPLSWQTRIRIATELCSVLIFLHSSKPHSIVHGDLKPANILLDENFVTKLSDFGICRLLD 604
Query: 672 -------------------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITK 706
EF+++GEL+PKSDVYSFGIILLRLLT R ALGITK
Sbjct: 605 HKEGSSNNTTICRTDPKGTFVYMDPEFVSTGELSPKSDVYSFGIILLRLLTARQALGITK 664
Query: 707 EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766
EV+YALD G LK LLDPLAGDWPFVQAE LA++A+RCCEM+RK+RP+L +VWRVLEPM+
Sbjct: 665 EVRYALDKGTLKTLLDPLAGDWPFVQAEMLAHMALRCCEMNRKNRPDLASEVWRVLEPMK 724
Query: 767 ASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETS 826
ASCG S+ +LGSEE +PP YFTCPIFQEVM+DPHVAADGFTYEAEALKGWLDSGH+TS
Sbjct: 725 ASCGTSSFSQLGSEEHFQPPSYFTCPIFQEVMRDPHVAADGFTYEAEALKGWLDSGHDTS 784
Query: 827 PMTNLPLAHKNLVPNLALRSAIQ 849
PMTN LAH +L+PN ALRSAIQ
Sbjct: 785 PMTNFKLAHCDLIPNRALRSAIQ 807
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531997|ref|XP_003534561.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/897 (61%), Positives = 661/897 (73%), Gaps = 56/897 (6%)
Query: 1 MALVSSVPAIAQGVDSVRCPDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESKS 60
MA+VS VPA Q + SVR ++ + I+EEP V++ IYVAV K+VKESK
Sbjct: 1 MAVVSPVPATTQRMGSVRL-------LSDAGGEILEEPNPRVVDQPIYVAVTKEVKESKL 53
Query: 61 VLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120
L+WA+Q SGGKRICI++VH A MIP++G KFPAS+L+EE+V+AY E ERQ MH LD
Sbjct: 54 NLIWAIQTSGGKRICILYVHVRATMIPLLGGKFPASTLKEEQVEAYWEEERQGMHGILDE 113
Query: 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 180
L IC++MGVRAEKL E +S EKGILELIS +GIRKLVMGAA+DK+Y ++MMDLKSKKA
Sbjct: 114 YLCICQRMGVRAEKLHIEMDSIEKGILELISQHGIRKLVMGAASDKYYNRRMMDLKSKKA 173
Query: 181 ISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQSV 240
+SV +QAPASCHI F+C G+LI+TR+ S D + E++SP Q N+ LRS S+
Sbjct: 174 VSVCKQAPASCHIQFVCKGHLIHTRDRSSDEGNAEVASPLVQQVPNS----LKSLRSLSI 229
Query: 241 VLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVM--TSQDSIGGLSSPASRSDAEVSSDE 298
L + +TNP +LF RVRS N D + + M +S + GLS+P R EVSSDE
Sbjct: 230 TLGQDCQANITNPALELFRRVRSAN-DGHGASFMAVSSPEDTEGLSTPRDRMGTEVSSDE 288
Query: 299 CTTGRSTSQGSLSSCSSRGVIDVAMIPLI---RTEGVSTLPPSK---EDLQ-SSPPSVLD 351
S LS+CS V ++A+ P + +E L S EDL SSPPS LD
Sbjct: 289 SDRLSRMSPSGLSTCSDSAV-ELALTPSLINESSENALELTLSHLIIEDLHHSSPPSTLD 347
Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
G +DD +YDQL QA AEAEN+ A++E +RR KAEKDA E+IR+ KASESLYAEEL +R
Sbjct: 348 GGMDDTIYDQLEQARAEAENATLNAYQETVRRMKAEKDAFEAIRKIKASESLYAEELNQR 407
Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
K EE L K ELE MK D V EEL++ALDQK+ LESQIA ++ KELEQKI+SAV
Sbjct: 408 KMAEEKLRKEKEELENMKSLRDTVKEELRLALDQKASLESQIASTELMIKELEQKILSAV 467
Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFD 531
LLQ+YK E+DELQM+ D A++EAEELRK + EAS + H+PQ S+FSFSEI+ AT NF+
Sbjct: 468 GLLQSYKNERDELQMQCDNALREAEELRKKQGEASGT-HVPQLCSEFSFSEIKEATSNFN 526
Query: 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
PS KIGEGGYGSI+KG+L H +VAIKML+ S+QGP EFQQE+D+LSK+RHPNL+TL+GA
Sbjct: 527 PSSKIGEGGYGSIFKGVLHHTEVAIKMLNSDSMQGPLEFQQEVDVLSKLRHPNLITLIGA 586
Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
CP+ W LVYEYLPNGSLEDRL+CKDN+PPLSWQ RIRIA ELCS LIFLHS KPHS+VHG
Sbjct: 587 CPDSWALVYEYLPNGSLEDRLACKDNTPPLSWQARIRIAAELCSALIFLHSSKPHSVVHG 646
Query: 652 DLKPANILLDANFVSKLSDF---------------------------------EFLASGE 678
DLKP+NILLDAN +SKLSDF EFLASGE
Sbjct: 647 DLKPSNILLDANLISKLSDFGICRILSNCESSGSNTTEFWRTDPKGTFVYMDPEFLASGE 706
Query: 679 LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
LTPKSDVYSFGIILLRLLTGRPALGIT EV+YALDTGKLK+LLDPLAGDWPFVQAEQLA
Sbjct: 707 LTPKSDVYSFGIILLRLLTGRPALGITMEVKYALDTGKLKSLLDPLAGDWPFVQAEQLAR 766
Query: 739 LAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVM 798
LA+RCC+M+RKSRP+L DVWR+L+ MR S GG+ S+ L SE + P YF CPIFQEVM
Sbjct: 767 LALRCCDMNRKSRPDLYSDVWRILDAMRVSSGGANSFGLSSEGLLQSPSYFICPIFQEVM 826
Query: 799 QDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
+DPHVAADGFTYEAEA++GWLD GH+ SPMTN LAH NLVPN ALRSAIQ+WLQ H
Sbjct: 827 RDPHVAADGFTYEAEAIRGWLDGGHDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 883
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522608|ref|XP_003529938.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/899 (59%), Positives = 648/899 (72%), Gaps = 64/899 (7%)
Query: 1 MALVSSVPAIAQGVDSVRC-PDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESK 59
MA+VSS+PA V+ V DI + GI +SRR IV +P S++ D IYVAV K VK SK
Sbjct: 1 MAMVSSMPATPPQVNPVNSLRDIGVPGIMTSRRKIVNKPSPSMVNDTIYVAVGKNVKSSK 60
Query: 60 SVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119
S L+WA+QNSGG+RICI+HVH PA MIP+MG KFPAS+L EE+VQ Y E ER M+ LD
Sbjct: 61 SNLIWAIQNSGGRRICILHVHVPAPMIPLMGAKFPASALREEEVQDYHETERLKMYKTLD 120
Query: 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 179
L IC+ MGVRA KL E + EKGI+ELIS YGI+KLVMGAA+DK++ ++M +SKK
Sbjct: 121 AYLSICQGMGVRAGKLQIEMDCIEKGIVELISQYGIQKLVMGAASDKYHSRRMTAPRSKK 180
Query: 180 AISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLRSQS 239
AI V +QAPASCHI FICNG LI+TR+ SLD + E++ P Q N+E LRSQS
Sbjct: 181 AIYVCEQAPASCHIQFICNGYLIHTRDCSLDIGNVEVAFPMAQQMANSEVGGSPKLRSQS 240
Query: 240 VVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSSDEC 299
+V N +KLTNP Q+LF RVRS+N G S AS SD
Sbjct: 241 IVQGQNHGIKLTNPAQELFRRVRSVN--------------DGHRRSLASVSDESYGQ--- 283
Query: 300 TTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVST---------LPPSKEDLQSSPPSVL 350
+GRS S S CS ++ + P + ++G +K S+ PS +
Sbjct: 284 -SGRSPS--VFSMCSHSISVEPGLTPNLISDGSENELDLTLNGPFLINKNLHHSASPSEM 340
Query: 351 DGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR 410
DG +DD LYDQL QAMAEA NS+R+A++E +RRG AEK+AI++IRRAK +E+LY EELK
Sbjct: 341 DGGMDDALYDQLEQAMAEAVNSKRDAYQETVRRGNAEKNAIDAIRRAKTTENLYKEELKL 400
Query: 411 RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
RKE EEA+ +L MK Q D+V EEL++AL Q S LE+QIA ++ KELEQKIISA
Sbjct: 401 RKEQEEAVEKANEKLNNMKSQTDKVNEELRLALFQNSSLENQIASTELMIKELEQKIISA 460
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
LLQNYK E D+LQ++RD AV EAEE R+ + EASSS+H Q FS+FSF EI+ AT NF
Sbjct: 461 ENLLQNYKDELDDLQIQRDIAVGEAEEFRRKQWEASSSAHKLQCFSEFSFQEIKEATSNF 520
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+PS KIGEGGYGSI+KG+LRH +VAIKML+ S QGP EFQQE+++LSK+RHPN++TL+G
Sbjct: 521 NPSQKIGEGGYGSIFKGILRHAEVAIKMLNRDSTQGPEEFQQEVEVLSKLRHPNIITLIG 580
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
ACPE WTLVYEYLPNGSLEDRL+CKDNSPPLSWQTRIRIATELCS LIFLHS KPHSI H
Sbjct: 581 ACPESWTLVYEYLPNGSLEDRLNCKDNSPPLSWQTRIRIATELCSALIFLHSNKPHSIAH 640
Query: 651 GDLKPANILLDANFVSKLSDF----------------------------------EFLAS 676
GDLKPANILLDAN VSKLSDF EFLAS
Sbjct: 641 GDLKPANILLDANLVSKLSDFGICRILLSCQDSSSNSTTQFWRTDPKGTFVYLDPEFLAS 700
Query: 677 GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736
GELTPKSDVYSFGIILLRL+TG+PALGI KEVQYALD GKLK++LDP AGDWPF+ AE+L
Sbjct: 701 GELTPKSDVYSFGIILLRLMTGKPALGIIKEVQYALDAGKLKSILDPFAGDWPFMLAEEL 760
Query: 737 ANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQE 796
LA+RCCEM+RKSRP+L DVWR+LEPMRAS G + +++LGS+ C+PPPYF CPIF E
Sbjct: 761 VRLALRCCEMNRKSRPDLYPDVWRILEPMRASSGVTNTFQLGSQGLCQPPPYFICPIFLE 820
Query: 797 VMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
VMQDPHVAADGFTYEAEA++ WL+SGH+TSP TN LAH++LVPN LR AIQ WLQ H
Sbjct: 821 VMQDPHVAADGFTYEAEAIREWLESGHDTSPRTNSKLAHRHLVPNHTLRHAIQNWLQSH 879
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356506214|ref|XP_003521882.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/894 (58%), Positives = 642/894 (71%), Gaps = 56/894 (6%)
Query: 1 MALVSSVPAIAQGVDSVRC-PDIQMAGITSSRRGIVEEPVASVIEDKIYVAVAKQVKESK 59
MA+VS +PA V+ V + + GI +SRR IV EP S++ + IYVAVAK VK+SK
Sbjct: 1 MAVVSPMPATPPQVNPVNLLRNTGVPGIMTSRREIVNEPSPSMVNETIYVAVAKDVKDSK 60
Query: 60 SVLLWALQNSGGKRICIIHVHTPAQMIPV--MGTKFPASSLEEEKVQAYREIERQDMHNH 117
L+WA+QNSGG+RICI+HVH PA MIP+ MG KFPAS+L EE VQ Y E ER MH
Sbjct: 61 LNLIWAIQNSGGRRICILHVHVPAPMIPLALMGAKFPASALREEGVQDYHERERLKMHKT 120
Query: 118 LDMCLLICRQMGVRAEKL-DTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLK 176
LD L IC++MGVRA KL E + EKGI+ELIS YGI+KLVMGAA+DK++ ++M L+
Sbjct: 121 LDAYLFICQRMGVRARKLLHIEMDCIEKGIVELISRYGIQKLVMGAASDKYHSRRMTSLR 180
Query: 177 SKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEISSPSFQASHNTENRHPNCLR 236
SKKAI V +QAPASCHI FICNG LI+TR+ SL+ + E+ P Q N+E H L
Sbjct: 181 SKKAIYVCEQAPASCHIQFICNGYLIHTRDCSLNRGNVEVEFPLLQQMANSEVGHSPNLS 240
Query: 237 SQSVVLRHNRPMKLTNPVQDLFHRVRSMNFDRNVGNVMTSQDSIGGLSSPASRSDAEVSS 296
QS++ N +KLTNP Q+LF RVRS+N D ++ ++ + S G L+ P+ S S
Sbjct: 241 FQSILQGQNHGIKLTNPAQELFRRVRSVN-DGHMRSLESVSSSEGFLTPPSKFSKNISSI 299
Query: 297 DECTTGRSTSQGSLSSCSSRGVIDVAMIPLIRTEGVSTLPP--SKEDLQSSPPSVLDGSV 354
+ T + GS +D+ + P +K+ SS PSVLD +
Sbjct: 300 EPGLTPNLINDGS------ENALDLIL----------NYPSLINKDLHHSSSPSVLDEGM 343
Query: 355 DDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF 414
DD LY QL Q MAEA N+RR+A++E +RR KAEKDAI++I RAKA+E+LY EELK RKE
Sbjct: 344 DDALYYQLEQVMAEASNARRDAYQETVRRSKAEKDAIDAIHRAKATENLYKEELKLRKEQ 403
Query: 415 EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
EEA+ +L MK Q D+V EEL++ALDQ S LE+QIA ++ KEL+QKIISA++LL
Sbjct: 404 EEAVEKANEKLNNMKSQTDKVNEELRLALDQNSSLENQIASTELMVKELKQKIISALDLL 463
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSL 534
QNYK E D+LQ++RD AV EAEE R + EASSS+ FSDFSF EI+ AT NF+PS
Sbjct: 464 QNYKDELDDLQIQRDNAVGEAEEFRSKQGEASSSAQELHCFSDFSFQEIKEATSNFNPSK 523
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
KIGEGGYGSI+KG+LRH +VAIKML+P S QGP EFQQE+++LSK+RHPNL+TL+GAC E
Sbjct: 524 KIGEGGYGSIFKGVLRHTEVAIKMLNPDSTQGPLEFQQEVEVLSKLRHPNLITLIGACAE 583
Query: 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654
WTLVYEYLPNGSLEDRL+ KDN+PPLSWQTRI IA ELCS L FLHS KPHSI HGDLK
Sbjct: 584 SWTLVYEYLPNGSLEDRLNRKDNTPPLSWQTRICIAAELCSALNFLHSNKPHSIAHGDLK 643
Query: 655 PANILLDANFVSKLSDF---------------------------------EFLASGELTP 681
PANILLDAN VSKLSDF EFLASGELTP
Sbjct: 644 PANILLDANLVSKLSDFGICRILSCQDSSSNSTTQFWRTVPKGTFVYVDPEFLASGELTP 703
Query: 682 KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741
KSDVYSFGIILLRL+TG+PALGI KEVQYALD GKLK++LDPLAG+WPF+ AE+L LA+
Sbjct: 704 KSDVYSFGIILLRLMTGKPALGIIKEVQYALDAGKLKSILDPLAGEWPFMLAEELIRLAL 763
Query: 742 RCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDP 801
RCCEM+RK+RPEL DVWR+LEPMRAS + + +LGS+ C+PPPYF CPIF EVMQDP
Sbjct: 764 RCCEMNRKNRPELYSDVWRILEPMRASSVVTNTSQLGSQRLCQPPPYFICPIFLEVMQDP 823
Query: 802 HVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
HVA+DGFTYEAEA++ WL+SG +TSP TN LAH+NLVPN ALR AIQ WLQ H
Sbjct: 824 HVASDGFTYEAEAIREWLESGRDTSPRTNSKLAHRNLVPNHALRHAIQNWLQSH 877
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 855 | ||||||
| TAIR|locus:2050669 | 834 | AT2G45910 [Arabidopsis thalian | 0.380 | 0.389 | 0.649 | 6.7e-186 | |
| TAIR|locus:2101353 | 805 | AT3G49060 [Arabidopsis thalian | 0.357 | 0.380 | 0.448 | 1.9e-144 | |
| TAIR|locus:2117343 | 835 | AT4G25160 [Arabidopsis thalian | 0.424 | 0.434 | 0.337 | 9.1e-89 | |
| UNIPROTKB|Q0DR28 | 518 | PUB57 "U-box domain-containing | 0.224 | 0.370 | 0.487 | 2.3e-87 | |
| TAIR|locus:2176177 | 819 | AT5G51270 [Arabidopsis thalian | 0.356 | 0.372 | 0.376 | 5.6e-84 | |
| TAIR|locus:2151641 | 796 | AT5G61560 [Arabidopsis thalian | 0.292 | 0.314 | 0.409 | 6.2e-84 | |
| TAIR|locus:504954932 | 789 | AT5G57035 [Arabidopsis thalian | 0.375 | 0.406 | 0.349 | 4e-82 | |
| TAIR|locus:2143094 | 701 | AT5G12000 [Arabidopsis thalian | 0.363 | 0.443 | 0.386 | 5.2e-78 | |
| TAIR|locus:2128131 | 764 | AT4G31230 [Arabidopsis thalian | 0.373 | 0.417 | 0.401 | 9e-75 | |
| TAIR|locus:2180677 | 703 | AT5G26150 [Arabidopsis thalian | 0.353 | 0.429 | 0.393 | 9e-74 |
| TAIR|locus:2050669 AT2G45910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1087 (387.7 bits), Expect = 6.7e-186, Sum P(2) = 6.7e-186
Identities = 213/328 (64%), Positives = 271/328 (82%)
Query: 344 SSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESL 403
SSP S DG VDD+ ++ +A +EA +S++EAF E LRR KAEK+A+++IRRAK SES
Sbjct: 298 SSPSSFPDG-VDDSFNVKIRKATSEAHSSKQEAFAETLRRQKAEKNALDAIRRAKQSESA 356
Query: 404 YAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKEL 463
Y+EELKRRK+ E A+A K +K + + +MEELQ A+ QK++LESQIA+SD T ++L
Sbjct: 357 YSEELKRRKDTEIAVAKEKERFITIKNEQEVIMEELQSAMAQKAMLESQIAKSDGTMEKL 416
Query: 464 EQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEI 523
QK+ AV+LLQ + E++ELQ ERD+A++EAEELR S E +S+ +PQ+F+DFSFSEI
Sbjct: 417 NQKLDIAVKLLQKLRDEREELQTERDRALREAEELR-SHAE-TSTLQLPQYFTDFSFSEI 474
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP 583
E AT++FD +LKIGEGGYGSIY GLLRH QVAIKML+P+S QGP E+QQE+D+LSK+RHP
Sbjct: 475 EEATNHFDSTLKIGEGGYGSIYVGLLRHTQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHP 534
Query: 584 NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
N++TL+GACPE W+LVYEYLP GSLEDRL+CKDNSPPLSWQ R+RIATE+C+ L+FLHS
Sbjct: 535 NIITLIGACPEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSN 594
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF 671
K HS+VHGDLKPANILLD+N VSKLSDF
Sbjct: 595 KAHSLVHGDLKPANILLDSNLVSKLSDF 622
|
|
| TAIR|locus:2101353 AT3G49060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 1.9e-144, Sum P(3) = 1.9e-144
Identities = 138/308 (44%), Positives = 213/308 (69%)
Query: 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
+AM + S R + EA ++ + + E++ +AKA E L +E +RK EE L KL
Sbjct: 295 KAMHDIGQSDRTVYGEAGKKWEEDASTTEALCKAKALEGLCIKESSQRKRLEELLEKEKL 354
Query: 424 ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDE 483
E++ + +Q++ M+ELQ+ + LESQ+ + KE +K +A+ELL+++++++DE
Sbjct: 355 EVKMVIEQNNGFMKELQMVQGRNLKLESQMRKLQDLEKEHGEKFDTAMELLKSFRQKRDE 414
Query: 484 LQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGS 543
++++ + AVKE LR+ K + S + D+SF EI AT+ FDPS K+GEG YGS
Sbjct: 415 IRIDHENAVKEVNALRRLVKGETGESSGSEML-DYSFMEINEATNEFDPSWKLGEGKYGS 473
Query: 544 IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYL 603
+YKG L+H+QVA+KML + EF++ ++ILS++RHPNLVTL+GACPE +L+Y+Y+
Sbjct: 474 VYKGNLQHLQVAVKMLPSYGSLNHFEFERRVEILSRVRHPNLVTLMGACPESRSLIYQYI 533
Query: 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
PNGSLED S ++N P LSW++RIRIA+E+CS L+FLHS P I+HG+LKP+ ILLD+N
Sbjct: 534 PNGSLEDCFSSENNVPALSWESRIRIASEICSALLFLHSNIP-CIIHGNLKPSKILLDSN 592
Query: 664 FVSKLSDF 671
V+K++D+
Sbjct: 593 LVTKINDY 600
|
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| TAIR|locus:2117343 AT4G25160 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 490 (177.5 bits), Expect = 9.1e-89, Sum P(3) = 9.1e-89
Identities = 127/376 (33%), Positives = 193/376 (51%)
Query: 320 DVAMIPLIRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEE 379
DV+ I T+ S P + D + + + S + Y + +
Sbjct: 267 DVSSINRSSTDTTSRWTPRRRDYEERKEA-MSSSSSNREYGNFGTRFSWSGMGVDTTHSR 325
Query: 380 ALRRGKAEKDAI--ESIRRAKASESLYAEELKRR-KEFEEALANGKLELERMKKQHDEVM 436
A ++ DA+ +S + + + E+L+ + +E A + E ++ E+
Sbjct: 326 ASQQASNMSDALSEQSYTDNQVNLNFEVEKLRAELRHVQEMYAVAQTETFDASRKLGELN 385
Query: 437 E---ELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVK 493
+ E I L++ L E + E + K+ +K E ++ ++ + E+ R+ K
Sbjct: 386 QRRLEEAIKLEELKLKEYEARELAEKEKQNFEKARRDAESMR--ERAEREIAQRREAERK 443
Query: 494 EAEELRKSRK-EASSSSHMPQF-FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH 551
A + ++ K E + S PQ + F++ EI AT +F LKIG G YG++YK L H
Sbjct: 444 SARDTKEKEKLEGTLGS--PQLQYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHH 501
Query: 552 MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDR 611
+K+L Q +FQQE++ILSKIRHP+LV L+GACPE LVYEY+ NGSLEDR
Sbjct: 502 TTAVVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPEQGALVYEYMENGSLEDR 561
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
L +NSPPL W R RIA E+ + L+FLH KP I+H DLKPANILLD NFVSK+ D
Sbjct: 562 LFQVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDV 621
Query: 672 EFLASGELTPKSDVYS 687
++ P S ++
Sbjct: 622 GLSTMVQVDPLSTKFT 637
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| UNIPROTKB|Q0DR28 PUB57 "U-box domain-containing protein 57" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 458 (166.3 bits), Expect = 2.3e-87, Sum P(2) = 2.3e-87
Identities = 95/195 (48%), Positives = 126/195 (64%)
Query: 663 NFVSKLS--DFEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 720
N ++L D EF +GELT SDVYS G+I+LRLLTG P L ++++V AL + L L
Sbjct: 310 NLTARLPYMDPEFNTTGELTTLSDVYSLGVIILRLLTGMPPLTLSEKVAEALGSDSLHLL 369
Query: 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGST-SYRLGS 779
+D AGDWP+++A+QLA + + C M+RK RP+L +VW V+EP+ +T Y +
Sbjct: 370 IDKSAGDWPYIEAKQLALIGLSCTGMTRKKRPDLLNEVWIVIEPLTRKPPAATWPYLQSA 429
Query: 780 EERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV 839
P F CPI E+M+DP VA+DGFTYEAEA++ W D G SPMTNL L + NLV
Sbjct: 430 SGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLV 489
Query: 840 PNLALRSAIQEWLQQ 854
PN LRS I +LQQ
Sbjct: 490 PNRVLRSFIHGYLQQ 504
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| TAIR|locus:2176177 AT5G51270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 5.6e-84, Sum P(3) = 5.6e-84
Identities = 118/313 (37%), Positives = 170/313 (54%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN-G 421
A + E SR ++ R KDA+ S+ ++ + ++ L
Sbjct: 291 ASKRSSPETSRSVSWNPQFRDFDERKDAMSSMSSNFEYGNVVTPLGHYFTDNQDTLNEIS 350
Query: 422 KLELERMKKQHDEVMEELQI-ALDQKSLLESQIAESDQTAKELEQKIISA--VELLQNYK 478
KL E ++ H E+ Q+ LD L +++ + T E E K I+ E + +
Sbjct: 351 KLRAE-LRHAH-EMYAVAQVETLDASRKL-NELKFEELTLLEHETKGIAKKETEKFEQKR 407
Query: 479 KEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHNFDPSLKIG 537
+E+ E R+ +K E ++ K SS P+ + +F++ EI AT +F LKIG
Sbjct: 408 REEREAAQRREAEMKATHEAKEKEKLEESSLVAPKLQYQEFTWEEIINATSSFSEDLKIG 467
Query: 538 EGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT 597
G YG +YK L H A+K+LH +F QE++ILSKIRHP+LV L+GACP+
Sbjct: 468 MGAYGDVYKCNLHHTIAAVKVLHSAESSLSKQFDQELEILSKIRHPHLVLLLGACPDHGA 527
Query: 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657
LVYEY+ NGSLEDRL ++S P+ W R+RIA E+ S L+FLH KP I+H DLKPAN
Sbjct: 528 LVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVFLHKSKPTPIIHRDLKPAN 587
Query: 658 ILLDANFVSKLSD 670
ILL+ NFVSK+ D
Sbjct: 588 ILLNHNFVSKVGD 600
|
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| TAIR|locus:2151641 AT5G61560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 448 (162.8 bits), Expect = 6.2e-84, Sum P(3) = 6.2e-84
Identities = 109/266 (40%), Positives = 152/266 (57%)
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLL--ESQIAESDQTAKELEQKIISAVELL 474
A+A ++ ++ KK D + A K+L E + E + +E ++ + EL+
Sbjct: 314 AVAQSEV-IDASKKMQDLNQRRSEEATRLKNLTIREEEADEVVEMERERQEDAENEAELV 372
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSH----MPQFFSDFSFSEIEGATHNF 530
+ + + E ER +A AEE+RK ++ + Q + F + EI AT +F
Sbjct: 373 RECIERETE---ERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIVEATSSF 429
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
LKIG GGYGS+Y+ L H VA+K+LH +F QE++ILSKIRHP+L+ L+G
Sbjct: 430 SDELKIGVGGYGSVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLG 489
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCK 644
ACPE +LVYEY+ NGSLE+RL + PPL W R RIA E+ S L FLH+ +
Sbjct: 490 ACPERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNE 549
Query: 645 PHSIVHGDLKPANILLDANFVSKLSD 670
P IVH DLKPANILLD N VSK+ D
Sbjct: 550 PRPIVHRDLKPANILLDRNNVSKIGD 575
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| TAIR|locus:504954932 AT5G57035 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 4.0e-82, Sum P(3) = 4.0e-82
Identities = 117/335 (34%), Positives = 172/335 (51%)
Query: 366 MAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLEL 425
+ + E+ R + K + D ++ K+ E+L RKE + L+ K
Sbjct: 259 LVDDEHCRSILRHSTVSTSKIQMDPRPHLKTPKSGVRAEVEQL--RKEVQTTLSMYKQAC 316
Query: 426 ERMKKQHDEVMEELQIALDQKSLLESQIAESD---QTAKELEQKIISAVELLQNYK---- 478
E + + +V + + + + + + + + A E ++K + AV+ ++ K
Sbjct: 317 EELVHKQTQVQSLSSECIKETERVITALEKEEMRRKAAAEEKEKHLKAVKEVEEAKSMLA 376
Query: 479 KEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGE 538
KE E Q+ A+K++ E +K ++ + ++ EI AT NF IGE
Sbjct: 377 KEFCERQLAELDALKQSIEKQKVIEQLFLRDGR---YRKYTKEEIAAATDNFSSRKIIGE 433
Query: 539 GGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL 598
GGYG +YK L H VA+K+L P S++ EF +EI +LS++RHP++V L+GACPE L
Sbjct: 434 GGYGKVYKCSLDHTPVALKVLKPDSVEKKEEFLKEISVLSQLRHPHVVLLLGACPENGCL 493
Query: 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
VYEY+ NGSL+ +S K P LSW R RI E L FLH+ KP IVH DLKP NI
Sbjct: 494 VYEYMENGSLDCHISPKKGKPSLSWFIRFRIIYETACGLAFLHNSKPEPIVHRDLKPGNI 553
Query: 659 LLDANFVSKLSDFEF--LASGELTPKSDVYSFGII 691
LLD NFVSK+ D L S E VY II
Sbjct: 554 LLDRNFVSKIGDVGLAKLMSDEAPDSVTVYRNSII 588
|
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| TAIR|locus:2143094 AT5G12000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 525 (189.9 bits), Expect = 5.2e-78, Sum P(3) = 5.2e-78
Identities = 125/323 (38%), Positives = 188/323 (58%)
Query: 353 SVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
S D D + M + + E F+ G +++ A +S R +A ELK+
Sbjct: 247 SFSDESSDVGSMMMMGSIDLSAENFDMVGGSGSSDESASQSTRDIEAEMKRLKIELKQTM 306
Query: 413 EFEEALANGKLELERMKKQHDE-VMEELQIALDQKSLLESQIAESDQTAKELEQ-KIISA 470
+ + L ++ + ++ MEE + + ++ E+ +A + E+E+ K +A
Sbjct: 307 DMYSSACKEALNAKKKANELNQWKMEEARRFEEARNAEEAALAVA-----EMEKAKCRAA 361
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF---FSDFSFSEIEGAT 527
+E + ++ EL+ +R K E + R+S+++ + S + Q + +S EIE AT
Sbjct: 362 LEAAEKAQR-MAELEGQRRKQA-EMKARRESQEKDRALSALVQNDVRYRKYSIDEIEVAT 419
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
F + KIGEGGYG +Y G L H VAIK+L P + QG +FQQE+++LS IRHP++V
Sbjct: 420 ERFANNRKIGEGGYGPVYHGTLDHTPVAIKVLRPDAAQGKKQFQQEVEVLSSIRHPHMVL 479
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
L+GACPE LVYE++ NGSLEDRL + NSPPLSW+ R +IA E+ + L FLH KP
Sbjct: 480 LLGACPEYGCLVYEFMDNGSLEDRLFRRGNSPPLSWRKRFQIAAEIATALSFLHQAKPEP 539
Query: 648 IVHGDLKPANILLDANFVSKLSD 670
+VH DLKPANILLD N+VSK+SD
Sbjct: 540 LVHRDLKPANILLDKNYVSKISD 562
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| TAIR|locus:2128131 AT4G31230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 9.0e-75, Sum P(3) = 9.0e-75
Identities = 136/339 (40%), Positives = 191/339 (56%)
Query: 341 DLQSSPPSVLDGS-VDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKA 399
D +PP + + S VD ++ + + S AF + A + +A
Sbjct: 280 DPNRTPPRLSNFSDVDYCSFESMTFGRRSMDLSSPTAFSTGSFENERFSSASQGGDDVEA 339
Query: 400 SESLYAEELKRRKEF-----EEAL-ANGKL-ELERMKKQHDEVMEELQIALDQKSLLESQ 452
ELK+ E +EAL A K EL+R K + EE ++A ++ +L
Sbjct: 340 EMRRLKLELKQTMEMYSTACKEALTAKHKATELQRWKLAEERKFEEAKLA-EEAALA--- 395
Query: 453 IAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD-KAVKEAEELRKSRKEASSSSHM 511
IAE ++ AK + + A E Q + +++ + KA+KE+E +R +A ++
Sbjct: 396 IAEKEK-AKS--KAAMEAAEAAQRIADIESRKRVDAETKALKESE----ARTKAVNALAK 448
Query: 512 PQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQ 571
+ +S EIE AT FD KIGEG YG +YK L H VA+K L P + QG S+FQ
Sbjct: 449 DVRYRKYSIEEIEDATEFFDDKYKIGEGSYGPVYKCYLDHTPVAVKALRPDAAQGRSQFQ 508
Query: 572 QEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
+E+++L IRHPN+V L+GACPE LVYE++ NGSLEDRL + +SP LSWQTR RIA
Sbjct: 509 KEVEVLCSIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRQGDSPALSWQTRFRIAA 568
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670
E+ +VL+FLH KP +VH DLKPANILLD NFVSKL+D
Sbjct: 569 EIGTVLLFLHQTKPEPLVHRDLKPANILLDRNFVSKLAD 607
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| TAIR|locus:2180677 AT5G26150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 515 (186.3 bits), Expect = 9.0e-74, Sum P(3) = 9.0e-74
Identities = 126/320 (39%), Positives = 185/320 (57%)
Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
GSVD + + + A +S E+ ++ + +AE ++ K + +Y+ K
Sbjct: 260 GSVDLSSQNSM-DFYHGASSSSEESIPQSTKDIEAEMRRLKL--ELKQTMDMYSSACKEA 316
Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESD-QTAKELEQKIISA 470
+ AN EL + K + E+ +++ ++ +L ++I ++ +TA E +K
Sbjct: 317 LTAKRK-AN---ELNQWKIEEARKFEKARLS-EEAALAVAEIEKAKCRTAVEAAEKAQRM 371
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
EL + +++Q E+ KAV E ++ K R S+ +H + +S EIE AT F
Sbjct: 372 AEL-EGQRRKQAEM-----KAVSEEKD--KDRA-VSALAHNDVRYRKYSIEEIEEATERF 422
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
KIGEGGYG +Y G L H VAIK+L P + QG +FQQE+++L IRHP++V L+G
Sbjct: 423 ANHRKIGEGGYGPVYNGELDHTPVAIKVLRPDAAQGKKQFQQEVEVLCSIRHPHMVLLLG 482
Query: 591 ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
ACPE LVYE++ NGSLEDRL NSPPLSW+ R IA E+ + L FLH KP +VH
Sbjct: 483 ACPEYGCLVYEFMENGSLEDRLFRTGNSPPLSWRKRFEIAAEIATALSFLHQAKPEPLVH 542
Query: 651 GDLKPANILLDANFVSKLSD 670
DLKPANILLD N+VSK+SD
Sbjct: 543 RDLKPANILLDKNYVSKISD 562
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8GUH1 | PUB33_ARATH | 2, ., 7, ., 1, 1, ., - | 0.5573 | 0.9333 | 0.9568 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 6.3.2 | 0.691 |
| 3rd Layer | 2.7.11 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pm.C_LG_II0723 | SubName- Full=Putative uncharacterized protein; (810 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 855 | |||
| cd01989 | 146 | cd01989, STK_N, The N-terminal domain of Eukaryoti | 6e-46 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-40 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 7e-39 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-37 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-36 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-35 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-35 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-34 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-30 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-26 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 4e-23 | |
| smart00504 | 63 | smart00504, Ubox, Modified RING finger domain | 2e-22 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-22 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 7e-22 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-21 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 8e-21 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-20 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 5e-20 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-19 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-19 | |
| pfam04564 | 73 | pfam04564, U-box, U-box domain | 7e-19 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 9e-19 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-18 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-18 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 6e-18 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 3e-17 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 3e-17 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-17 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 7e-17 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 7e-17 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-16 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-16 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-16 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-16 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 3e-16 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-16 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 3e-16 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 4e-16 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 5e-16 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 6e-16 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-16 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 9e-16 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-15 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 1e-15 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-15 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-15 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 4e-15 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 5e-15 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 6e-15 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 1e-14 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-14 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-14 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 2e-14 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 3e-14 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 4e-14 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 5e-14 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 5e-14 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 7e-14 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 8e-14 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-13 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 1e-13 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-13 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 2e-13 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-13 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 6e-13 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 8e-13 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 9e-13 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-12 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-12 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-12 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-12 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 2e-12 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-12 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-12 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-12 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 4e-12 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 4e-12 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-12 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 6e-12 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 6e-12 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 7e-12 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 7e-12 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 7e-12 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 7e-12 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 8e-12 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 8e-12 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 8e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 9e-12 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 9e-12 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-11 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-11 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 1e-11 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-11 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 2e-11 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 2e-11 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 4e-11 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-11 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 4e-11 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 5e-11 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-11 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 6e-11 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 7e-11 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 9e-11 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 9e-11 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 1e-10 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-10 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-10 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 2e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-10 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-10 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-10 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-10 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 3e-10 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-10 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-10 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 4e-10 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 5e-10 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 6e-10 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 7e-10 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 7e-10 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 7e-10 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 1e-09 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-09 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-09 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 2e-09 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 3e-09 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-09 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 3e-09 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 4e-09 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 4e-09 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 4e-09 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 4e-09 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-09 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 5e-09 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 6e-09 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 6e-09 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 7e-09 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 7e-09 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 7e-09 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 1e-08 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-08 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 1e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-08 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-08 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-08 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-08 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-08 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 3e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-08 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 3e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 4e-08 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 4e-08 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 4e-08 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 6e-08 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 6e-08 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 6e-08 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 7e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-08 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 8e-08 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 1e-07 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 1e-07 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-07 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 1e-07 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 2e-07 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 2e-07 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 2e-07 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-07 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-07 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 3e-07 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-07 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 3e-07 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 3e-07 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-07 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 4e-07 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 5e-07 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 7e-07 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 7e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-07 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 8e-07 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 8e-07 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 9e-07 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 9e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 1e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-06 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 2e-06 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 2e-06 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-06 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 2e-06 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 2e-06 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 3e-06 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-06 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 8e-06 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 8e-06 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 1e-05 | |
| COG1579 | 239 | COG1579, COG1579, Zn-ribbon protein, possibly nucl | 1e-05 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 1e-05 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 1e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-05 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 1e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-05 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-05 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 2e-05 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-05 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 2e-05 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 2e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-05 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-05 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 2e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-05 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-05 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 3e-05 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 3e-05 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 4e-05 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 4e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-05 | |
| cd00293 | 130 | cd00293, USP_Like, Usp: Universal stress protein f | 5e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 6e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 6e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-05 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 7e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 8e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 8e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 9e-05 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 9e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 9e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-04 | |
| COG1842 | 225 | COG1842, PspA, Phage shock protein A (IM30), suppr | 1e-04 | |
| pfam04012 | 220 | pfam04012, PspA_IM30, PspA/IM30 family | 1e-04 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 1e-04 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 1e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-04 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 2e-04 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 2e-04 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 2e-04 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 2e-04 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-04 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 2e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-04 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 3e-04 | |
| pfam09731 | 493 | pfam09731, Mitofilin, Mitochondrial inner membrane | 3e-04 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 3e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-04 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 4e-04 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 4e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 5e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 5e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 5e-04 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-04 | |
| COG4487 | 438 | COG4487, COG4487, Uncharacterized protein conserve | 5e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 6e-04 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 6e-04 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 6e-04 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 6e-04 | |
| pfam13863 | 126 | pfam13863, DUF4200, Domain of unknown function (DU | 6e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 7e-04 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 7e-04 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 7e-04 | |
| pfam13949 | 292 | pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain bi | 7e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 8e-04 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 8e-04 | |
| TIGR03319 | 514 | TIGR03319, RNase_Y, ribonuclease Y | 8e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 9e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.001 | |
| COG3173 | 321 | COG3173, COG3173, Predicted aminoglycoside phospho | 0.001 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 0.001 | |
| pfam13514 | 1118 | pfam13514, AAA_27, AAA domain | 0.001 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 0.001 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.001 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 0.001 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 0.001 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 0.001 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| COG4477 | 570 | COG4477, EzrA, Negative regulator of septation rin | 0.002 | |
| pfam00769 | 244 | pfam00769, ERM, Ezrin/radixin/moesin family | 0.002 | |
| pfam00430 | 132 | pfam00430, ATP-synt_B, ATP synthase B/B' CF(0) | 0.002 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 0.002 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.003 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 0.003 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.003 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.003 | |
| PRK12705 | 508 | PRK12705, PRK12705, hypothetical protein; Provisio | 0.003 | |
| PRK14139 | 185 | PRK14139, PRK14139, heat shock protein GrpE; Provi | 0.003 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 0.003 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 0.003 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 0.003 | |
| COG4372 | 499 | COG4372, COG4372, Uncharacterized protein conserve | 0.003 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.004 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.004 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.004 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.004 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 0.004 | |
| pfam12037 | 276 | pfam12037, DUF3523, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|238947 cd01989, STK_N, The N-terminal domain of Eukaryotic Serine Threonine kinases | Back alignment and domain information |
|---|
Score = 160 bits (408), Expect = 6e-46
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 46 KIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKV 103
+ VAV K K+SK+ L WAL N + G+ I ++HVH P IP K E
Sbjct: 1 SVAVAVDK-DKKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGKL-------EVA 52
Query: 104 QAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAA 163
AY++ E ++ L C + GV+ E + E + K I+E ++ +GI KLVMGA+
Sbjct: 53 SAYKQEEDKEAKELLLPYRCFCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGAS 112
Query: 164 ADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199
+D H+ K KS A SV ++AP C ++ + G
Sbjct: 113 SDNHFSMK--FKKSDVASSVLKEAPDFCTVYVVSKG 146
|
The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding. Length = 146 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 3e-40
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 37/192 (19%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC 592
+GEGG+G++Y + +VAIK++ E +EI+IL K+ HPN+V L G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
LV EY GSL+D L K+N LS +RI ++ L +LHS + I+H
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLL--KENEGKLSEDEILRILLQILEGLEYLHS---NGIIH 115
Query: 651 GDLKPANILLDA-NFVSKLSDF--------------------EFLA------SGELTPKS 683
DLKP NILLD+ N KL+DF ++A G + KS
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 684 DVYSFGIILLRL 695
D++S G+IL L
Sbjct: 176 DIWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 144 bits (367), Expect = 7e-39
Identities = 78/256 (30%), Positives = 115/256 (44%), Gaps = 51/256 (19%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
K+GEG +G +YKG L+ ++VA+K L S Q EF +E I+ K+ HPN+V
Sbjct: 6 KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65
Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+G C E +V EY+ G L L + N P LS + A ++ + +L S
Sbjct: 66 LLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSFALQIARGMEYLESKN- 122
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGEL 679
+H DL N L+ N V K+SDF E L G+
Sbjct: 123 --FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKF 180
Query: 680 TPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736
T KSDV+SFG++L + T +P G++ +EV L G L P +L
Sbjct: 181 TSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNG---YRLPQ-----PPNCPPEL 232
Query: 737 ANLAMRCCEMSRKSRP 752
+L ++C + RP
Sbjct: 233 YDLMLQCWAEDPEDRP 248
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 2e-37
Identities = 72/259 (27%), Positives = 104/259 (40%), Gaps = 45/259 (17%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
K+GEG +G +Y + VAIK++ + +EI IL K++HPN+V L
Sbjct: 6 KLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDV 65
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+++ LV EY G L D L LS ++ S L +LHS I
Sbjct: 66 FEDEDKLY-LVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQILSALEYLHS---KGI 118
Query: 649 VHGDLKPANILLDANFVSKLSDF------------------------EFLASGELTPKSD 684
VH DLKP NILLD + KL+DF E L D
Sbjct: 119 VHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVD 178
Query: 685 VYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
++S G+IL LLTG+ P G + ++ GK K P D + +L +
Sbjct: 179 IWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDIS----PEAKDLIRKL 234
Query: 744 CEMSRKSRP---ELGKDVW 759
+ R E + +
Sbjct: 235 LVKDPEKRLTAEEALQHPF 253
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 1e-36
Identities = 80/257 (31%), Positives = 114/257 (44%), Gaps = 52/257 (20%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
K+GEG +G +YKG L+ ++VA+K L S Q EF +E I+ K+ HPN+V
Sbjct: 6 KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPP-LSWQTRIRIATELCSVLIFLHSCK 644
L+G C E +V EY+P G L D L + N P LS + A ++ + +L S
Sbjct: 66 LLGVCTEEEPLMIVMEYMPGGDLLDYL--RKNRPKELSLSDLLSFALQIARGMEYLESKN 123
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGE 678
+H DL N L+ N V K+SDF E L G+
Sbjct: 124 ---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGK 180
Query: 679 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
T KSDV+SFG++L + T P G++ EV L G L P +
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKG---YRLPK-----PPNCPPE 232
Query: 736 LANLAMRCCEMSRKSRP 752
L L ++C + RP
Sbjct: 233 LYKLMLQCWAEDPEDRP 249
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 134 bits (341), Expect = 2e-35
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 52/257 (20%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
K+GEG +G +YKG L+ +VA+K L S + EF +E I+ K+ HPN+V
Sbjct: 6 KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65
Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+G C E +V EY+P G L D L + + L+ + +++A ++ + +L S
Sbjct: 66 LLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQMALQIAKGMEYLES--- 120
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGE 678
+ VH DL N L+ N V K+SDF E L G+
Sbjct: 121 KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGK 180
Query: 679 LTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
T KSDV+SFG++L + T +P G++ +EV L+ G L +
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDG---YRLPRPENCPD-----E 232
Query: 736 LANLAMRCCEMSRKSRP 752
L L ++C + RP
Sbjct: 233 LYELMLQCWAYDPEDRP 249
|
Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 3e-35
Identities = 86/265 (32%), Positives = 120/265 (45%), Gaps = 51/265 (19%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLV 589
K+G G +G++YK + VA+K+L S + + Q EI IL ++ HPN+V L+
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRLSHPNIVRLI 64
Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
A ++ LV EY G L D LS PLS +IA ++ L +LHS +
Sbjct: 65 DAFEDKDHLY-LVMEYCEGGDLFDYLS---RGGPLSEDEAKKIALQILRGLEYLHS---N 117
Query: 647 SIVHGDLKPANILLDANFVSKLSDF----EFLASGEL----------------------T 680
I+H DLKP NILLD N V K++DF + L S
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYG 177
Query: 681 PKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFV--QAEQLA 737
PK DV+S G+IL LLTG+P G Q L + L PL D P +E+
Sbjct: 178 PKVDVWSLGVILYELLTGKPPFSGENILDQLQLI---RRILGPPLEFDEPKWSSGSEEAK 234
Query: 738 NLAMRCCEMSRKSRP---ELGKDVW 759
+L +C RP E+ + W
Sbjct: 235 DLIKKCLNKDPSKRPTAEEILQHPW 259
|
Length = 260 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-34
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 44/199 (22%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
K+GEG +G +YKG L+ +VA+K L S + +F +E ++ K+ HPN+V L
Sbjct: 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61
Query: 589 VGACPEV--WTLVYEYLPNGSLEDRL------SCKDNSPPLSWQTRIRIATELCSVLIFL 640
+G C E LV EY+ G L D L LS + + A ++ + +L
Sbjct: 62 LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------------EF 673
S K VH DL N L+ + V K+SDF E
Sbjct: 122 ASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES 178
Query: 674 LASGELTPKSDVYSFGIIL 692
L G T KSDV+SFG++L
Sbjct: 179 LKDGIFTSKSDVWSFGVLL 197
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-30
Identities = 64/200 (32%), Positives = 94/200 (47%), Gaps = 35/200 (17%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
F+ KIG+GG+G +YK + VAIK++ S + + EI IL K +HPN+V
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 588 LVGA--CP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G+ E+W +V E+ GSL+D L K + L+ + EL L +LHS
Sbjct: 62 YYGSYLKKDELW-IVMEFCSGGSLKDLL--KSTNQTLTESQIAYVCKELLKGLEYLHS-- 116
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTP----------------------- 681
+ I+H D+K ANILL ++ KL DF A T
Sbjct: 117 -NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYD 175
Query: 682 -KSDVYSFGIILLRLLTGRP 700
K+D++S GI + L G+P
Sbjct: 176 YKADIWSLGITAIELAEGKP 195
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 41/201 (20%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+G G +GS+Y L + +A+K L S + ++EI ILS ++HPN+V G
Sbjct: 7 LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66
Query: 591 AC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+ + EY+ GSL L L + ++ L +LHS +
Sbjct: 67 SERDEEKNTLNIFLEYVSGGSLSSLL---KKFGKLPEPVIRKYTRQILEGLAYLHS---N 120
Query: 647 SIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGEL 679
IVH D+K ANIL+D++ V KL+DF E + E
Sbjct: 121 GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEY 180
Query: 680 TPKSDVYSFGIILLRLLTGRP 700
+D++S G ++ + TG+P
Sbjct: 181 GRAADIWSLGCTVIEMATGKP 201
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 102 bits (253), Expect = 4e-23
Identities = 77/267 (28%), Positives = 107/267 (40%), Gaps = 51/267 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHP-NLVTL-- 588
K+GEG +G +Y VA+K+L E F +EI IL+ + HP N+V L
Sbjct: 7 KLGEGSFGEVYLAR-DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYD 65
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
LV EY+ GSLED L PLS + I ++ S L +LHS I
Sbjct: 66 FFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGI 122
Query: 649 VHGDLKPANILLDAN-FVSKLSDF----------------------------------EF 673
+H D+KP NILLD + V KL DF
Sbjct: 123 IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLG 182
Query: 674 LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------LKNLLDPLAGD 727
L+ + SD++S GI L LLTG P K T K +L PL+
Sbjct: 183 LSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPS 242
Query: 728 WPFVQAEQLANLAMRCCEMSRKSRPEL 754
P + ++ ++L + K+R
Sbjct: 243 NPELISKAASDLLKKLLAKDPKNRLSS 269
|
Length = 384 |
| >gnl|CDD|128780 smart00504, Ubox, Modified RING finger domain | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 2e-22
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 788 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSA 847
F CPI EVM+DP + G TYE A++ WL S H T P+T PL H++L+PNLAL+SA
Sbjct: 1 EFLCPISLEVMKDPVILPSGQTYERSAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSA 59
Query: 848 IQEW 851
IQEW
Sbjct: 60 IQEW 63
|
Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination. Length = 63 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 6e-22
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 29/181 (16%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV 595
IG+G +G + G R +VA+K L S + F E +++ +RHPNLV L+G +
Sbjct: 14 IGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLVQLLGVVLQG 72
Query: 596 WTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
L V EY+ GSL D L + + ++ ++ A ++C + +L VH DL
Sbjct: 73 NPLYIVTEYMAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEEKN---FVHRDL 128
Query: 654 KPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSFGII 691
N+L+ + V+K+SDF E L + + KSDV+SFGI+
Sbjct: 129 AARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188
Query: 692 L 692
L
Sbjct: 189 L 189
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 7e-22
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 37/213 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
K+G G +G ++ G +VA+K L P ++ P F QE I+ K+RH LV L C
Sbjct: 13 KLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLYAVCS 71
Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E +V EY+ GSL D L L + +A ++ + +L S + +H
Sbjct: 72 EEEPIYIVTEYMSKGSLLDFLK-SGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHR 127
Query: 652 DLKPANILLDANFVSKLSDF---------EFLAS-----------------GELTPKSDV 685
DL NIL+ N V K++DF E+ A G T KSDV
Sbjct: 128 DLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDV 187
Query: 686 YSFGIILLRLLT-GR-PALGITK-EVQYALDTG 715
+SFGI+L ++T GR P G+T EV ++ G
Sbjct: 188 WSFGILLTEIVTYGRVPYPGMTNREVLEQVERG 220
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 3e-21
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVG 590
IG G +G +YKGL VAIK + ++ + QEID+L ++HPN+V +G
Sbjct: 7 LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66
Query: 591 ACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ +L + EY NGSL + P ++ L +LH +
Sbjct: 67 SIETSDSLYIILEYAENGSLRQIIK---KFGPFPESLVAVYVYQVLQGLAYLHE---QGV 120
Query: 649 VHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELTPKS 683
+H D+K ANIL + V KL+DF E + + S
Sbjct: 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTAS 180
Query: 684 DVYSFGIILLRLLTGRP 700
D++S G ++ LLTG P
Sbjct: 181 DIWSLGCTVIELLTGNP 197
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 8e-21
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 51/207 (24%)
Query: 535 KIGEGGYGSIYKGLLRH----MQVAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
+IG+G +G +Y L+R +K L S + + E+ IL K+ HPN++
Sbjct: 7 QIGKGSFGKVY--LVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY 64
Query: 589 VGACPEVWT------LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLH 641
E + +V EY G L ++ K P + + +LC L +LH
Sbjct: 65 Y----ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF---------EFLAS---GELTP-------- 681
S K I+H D+KP NI L +N + KL DF LA G TP
Sbjct: 121 SRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVG--TPYYLSPELC 175
Query: 682 -------KSDVYSFGIILLRLLTGRPA 701
KSD++S G +L L T +
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKHP 202
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 2e-20
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 57/209 (27%)
Query: 536 IGEGGYGSIYKGLL------RHMQ-VAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
+GEG +G +YKG L VAIK L + EF+QE +++S ++HPN+V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSP---------------PLSWQTRIRIA 630
L+G C + +++EYL +G L + L NSP L + IA
Sbjct: 73 LLGVCTKEQPTCMLFEYLAHGDLHEFLV--RNSPHSDVGAESGDETVKSSLDCSDFLHIA 130
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------- 671
++ + + +L S H VH DL N L+ K+SDF
Sbjct: 131 IQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSL 187
Query: 672 --------EFLASGELTPKSDVYSFGIIL 692
E + G+ T +SD++SFG++L
Sbjct: 188 LPVRWMPPEAILYGKFTTESDIWSFGVVL 216
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.6 bits (226), Expect = 5e-20
Identities = 63/200 (31%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
K+GEG YG +YK R + VA+K + + +G PS +EI +L +++HPN+V L
Sbjct: 6 KLGEGTYGVVYKA--RDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKL 63
Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
V LV+EY L+ L PLS I +L L + HS H
Sbjct: 64 LDVIHTERKLYLVFEYCDM-DLKKYL--DKRPGPLSPNLIKSIMYQLLRGLAYCHS---H 117
Query: 647 SIVHGDLKPANILLDANFVSKLSDF----EF----------------------LASGELT 680
I+H DLKP NIL++ + V KL+DF F L S +
Sbjct: 118 RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYS 177
Query: 681 PKSDVYSFGIILLRLLTGRP 700
D++S G I ++TG+P
Sbjct: 178 TAVDIWSVGCIFAEMITGKP 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 2e-19
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 37/213 (17%)
Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G G +G +++GL + VA+K L P ++ P +F E I+ K+RHP L+ L C
Sbjct: 13 KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71
Query: 594 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E +V E + GSL + L L I +A ++ S + +L + + +H
Sbjct: 72 LEEPIYIVTELMKYGSLLEYLQ-GGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHR 127
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL N+L+ N + K++DF E + KSDV
Sbjct: 128 DLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDV 187
Query: 686 YSFGIILLRLLT-GR-PALGIT-KEVQYALDTG 715
+SFGI+L ++T GR P G+T EV +D G
Sbjct: 188 WSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG 220
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 2e-19
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 49/208 (23%)
Query: 535 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNL 585
++GEG +G + R+ QVA+K L+ Q S+F++EI+IL + H N+
Sbjct: 11 QLGEGHFGKVELC--RYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68
Query: 586 VTLVGACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
V G C + L+ EYLP+GSL D L + + ++ + + ++++C + +L
Sbjct: 69 VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYL--QRHRDQINLKRLLLFSSQICKGMDYLG 126
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------------EF 673
S + +H DL NIL+++ + K+SDF E
Sbjct: 127 SQR---YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPEC 183
Query: 674 LASGELTPKSDVYSFGIILLRLLT-GRP 700
L + + + SDV+SFG+ L L T G P
Sbjct: 184 LRTSKFSSASDVWSFGVTLYELFTYGDP 211
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|203049 pfam04564, U-box, U-box domain | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 7e-19
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 786 PPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALR 845
P F PI E+M+DP + G TY+ ++ L S T P T PL H L+PNL L+
Sbjct: 2 PDEFLDPITLELMKDPVILPSGITYDRSTIERHLLSVDPTDPFTREPLTHDQLIPNLELK 61
Query: 846 SAIQEWLQQH 855
I WL+++
Sbjct: 62 EKIDAWLEEN 71
|
This domain is related to the Ring finger pfam00097 but lacks the zinc binding residues. Length = 73 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 9e-19
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 55/212 (25%)
Query: 536 IGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVT 587
+GEG +G ++ G H VA+K L + + F++E ++L+ +H N+V
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSP-------------PLSWQTRIRIATE 632
G C E +V+EY+ +G L L + + P L+ ++IA +
Sbjct: 73 FYGVCTEGDPPIMVFEYMEHGDLNKFL--RSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------- 671
+ S +++L S VH DL N L+ + V K+ DF
Sbjct: 131 IASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLP 187
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLT 697
E + + T +SDV+SFG++L + T
Sbjct: 188 IRWMPPESIMYRKFTTESDVWSFGVVLWEIFT 219
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 1e-18
Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 50/301 (16%)
Query: 513 QFF-SDFSFS-EIEGATHNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS 568
QFF S S S I + I G G+ YKG + MQ +K ++ + S
Sbjct: 673 QFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSS 732
Query: 569 EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
E + K++HPN+V L+G C + L++EY+ +L + L LSW+ R
Sbjct: 733 EIAD----MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERR 782
Query: 627 IRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKL---------SDFEFLAS 676
+IA + L FLH C P ++V G+L P I++D L +D + S
Sbjct: 783 RKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFIS 841
Query: 677 G-----------ELTPKSDVYSFGIILLRLLTGR----PALG----ITKEVQYALDTGKL 717
++T KSD+Y FG+IL+ LLTG+ G I + +Y L
Sbjct: 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL 901
Query: 718 KNLLDP-LAGDWPFVQAE--QLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTS 774
+DP + GD Q E ++ NLA+ C +RP DV + LE S +
Sbjct: 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP-CANDVLKTLESASRSSSSCVT 960
Query: 775 Y 775
Sbjct: 961 G 961
|
Length = 968 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.0 bits (214), Expect = 1e-18
Identities = 63/200 (31%), Positives = 87/200 (43%), Gaps = 44/200 (22%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+G+G +G + L+R A+K+L + E + E +ILS+I HP +V L
Sbjct: 1 LGKGSFGKVL--LVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL 58
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHSCKP 645
A E LV EY P G L LS S + R R A E+ L +LHS
Sbjct: 59 HYAFQTEEKLYLVLEYAPGGELFSHLS---KEGRFS-EERARFYAAEIVLALEYLHS--- 111
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELT 680
I++ DLKP NILLDA+ KL+DF E L
Sbjct: 112 LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYG 171
Query: 681 PKSDVYSFGIILLRLLTGRP 700
D +S G++L +LTG+P
Sbjct: 172 KAVDWWSLGVLLYEMLTGKP 191
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 6e-18
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
+G G +GS+ KG+ ++VA+K L H G EF +E +++++ HP +V L+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 590 GAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
G C E LV E P G L L K + +A ++ + +L S
Sbjct: 63 GVCKGEPLMLVMELAPLGPLLKYL--KKR-REIPVSDLKELAHQVAMGMAYLESKH---F 116
Query: 649 VHGDLKPANILLDANFVSKLSDF----------------------------EFLASGELT 680
VH DL N+LL +K+SDF E + G+ +
Sbjct: 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFS 176
Query: 681 PKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 716
KSDV+S+G+ L + +P + EV L++G+
Sbjct: 177 SKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE 215
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 536 IGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
+G G +G ++ G R + VAIKM+ ++ +F +E ++ K+ HPNLV L G C +
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAMS-EDDFIEEAKVMMKLSHPNLVQLYGVCTK 70
Query: 595 VWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
+ V EY+ NG L + L ++ L + + + +++C + +L S + +H D
Sbjct: 71 QRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRD 125
Query: 653 LKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDVY 686
L N L+ + V K+SDF E + KSDV+
Sbjct: 126 LAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVW 185
Query: 687 SFGIILLRLLTG 698
SFG+++ + +
Sbjct: 186 SFGVLMWEVFSE 197
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 3e-17
Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 44/249 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G G +G ++ G H +VAIK L S+ P F E +++ +++HP LV L
Sbjct: 13 KLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVT 71
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
E ++ EY+ NGSL D L + L+ I +A ++ + F+ + +H D
Sbjct: 72 QEPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIER---KNYIHRD 127
Query: 653 LKPANILLDANFVSKLSDF---------EFLAS-----------------GELTPKSDVY 686
L+ ANIL+ K++DF E+ A G T KSDV+
Sbjct: 128 LRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 187
Query: 687 SFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
SFGI+L ++T GR P G+T EV L+ G P + P E+L L C
Sbjct: 188 SFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM----PRPDNCP----EELYELMRLC 239
Query: 744 CEMSRKSRP 752
+ + RP
Sbjct: 240 WKEKPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 53/256 (20%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
IG G +G + +G L+ + VAIK L S + +F E I+ + HPN++ L
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71
Query: 590 GACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G + + + EY+ NGSL+ L ++N + + + + S + +L +
Sbjct: 72 GVVTKSRPVMIITEYMENGSLDKFL--RENDGKFTVGQLVGMLRGIASGMKYLSE---MN 126
Query: 648 IVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGELT 680
VH DL NIL+++N V K+SDF E +A + T
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFT 186
Query: 681 PKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG-KLKNLLDPLAGDWPFVQAEQL 736
SDV+SFGI++ +++ RP ++ ++V A++ G +L P D P +
Sbjct: 187 SASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL-----PPPMDCPSALYQ-- 239
Query: 737 ANLAMRCCEMSRKSRP 752
L + C + R RP
Sbjct: 240 --LMLDCWQKDRNERP 253
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 7e-17
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 42/196 (21%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G G +G +++GL + ++VAIK+L L +FQ+E+ L ++RH +L++L C
Sbjct: 13 KLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS 72
Query: 594 E---VWTLVYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
V+ ++ E + GSL L + L I +A ++ + +L
Sbjct: 73 VGEPVY-IITELMEKGSLLAFLRSPEGQVLPVASL-----IDMACQVAEGMAYLEE---Q 123
Query: 647 SIVHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELTP 681
+ +H DL NIL+ + V K++DF E + G +
Sbjct: 124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFST 183
Query: 682 KSDVYSFGIILLRLLT 697
KSDV+SFGI+L + T
Sbjct: 184 KSDVWSFGILLYEMFT 199
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 7e-17
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 47/201 (23%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
KIGEG G +YK R +VAIK + L+ ++ EI I+ +HPN+V
Sbjct: 26 KIGEGASGEVYKATDRATGKEVAIKKMR---LRKQNKELIINEILIMKDCKHPNIVDYYD 82
Query: 591 AC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI-RIATELCSVLIFLHSCKPH 646
+ E+W +V EY+ GSL D ++ N ++ + +I + E+ L +LHS
Sbjct: 83 SYLVGDELW-VVMEYMDGGSLTDIITQ--NFVRMN-EPQIAYVCREVLQGLEYLHS---Q 135
Query: 647 SIVHGDLKPANILLDANFVSKLSDFEFLASGELT-------------------------- 680
+++H D+K NILL + KL+DF F A +LT
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADFGFAA--QLTKEKSKRNSVVGTPYWMAPEVIKRKDY 193
Query: 681 -PKSDVYSFGIILLRLLTGRP 700
PK D++S GI+ + + G P
Sbjct: 194 GPKVDIWSLGIMCIEMAEGEP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 1e-16
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
+G+G G +YK + A+K +H + + +E+ L P +V GA
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGA 67
Query: 592 C--PEVWTLVYEYLPNGSLEDRL--SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
++V EY+ GSL D L K P L+ IA ++ L +LH
Sbjct: 68 FYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA-----YIARQILKGLDYLH--TKRH 120
Query: 648 IVHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELTPK 682
I+H D+KP+N+L+++ K++DF E + +
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYA 180
Query: 683 SDVYSFGIILLRLLTGR 699
+D++S G+ LL G+
Sbjct: 181 ADIWSLGLTLLECALGK 197
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 1e-16
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 40/197 (20%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIK---MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
KIG+G +G +YKG+L+ + +VA+K P L+ +F QE +IL + HPN+V L+G
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLK--RKFLQEAEILKQYDHPNIVKLIG 59
Query: 591 ACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
C + + V E +P GSL L K N + ++ + + + + +L S +
Sbjct: 60 VCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSL--DAAAGMEYLES---KNC 114
Query: 649 VHGDLKPANILLDANFVSKLSDF---------------------------EFLASGELTP 681
+H DL N L+ N V K+SDF E L G T
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTS 174
Query: 682 KSDVYSFGIILLRLLTG 698
+SDV+S+GI+L +
Sbjct: 175 ESDVWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 48/203 (23%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIK-MLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVG 590
KIGEG YG +YK L VAIK + +G P +EI +L ++ HPN++ L+
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL- 64
Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHSC 643
+V+ LV+E++ + L + KD L ++ I+ +L L F HS
Sbjct: 65 ---DVFRHKGDLYLVFEFM-DTDLYKLI--KDRQRGLP-ESLIKSYLYQLLQGLAFCHS- 116
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEF--------------------------LASG 677
H I+H DLKP N+L++ V KL+DF L
Sbjct: 117 --HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDK 174
Query: 678 ELTPKSDVYSFGIILLRLLTGRP 700
+ D++S G I LL+ RP
Sbjct: 175 GYSTPVDIWSVGCIFAELLSRRP 197
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 2e-16
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 56/210 (26%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL 585
FD K+GEG YGS+YK + H + VAIK++ E +EI IL + P +
Sbjct: 5 FDILEKLGEGSYGSVYKAI--HKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYI 60
Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLED--RLSCKDNSPPLSWQTRIRIATELCSV---L 637
V G+ ++W +V EY GS+ D +++ K L+ + IA L L
Sbjct: 61 VKYYGSYFKNTDLW-IVMEYCGAGSVSDIMKITNK----TLTEE---EIAAILYQTLKGL 112
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGEL------------TP---- 681
+LHS + +H D+K NILL+ +KL+DF SG+L TP
Sbjct: 113 EYLHS---NKKIHRDIKAGNILLNEEGQAKLADFG--VSGQLTDTMAKRNTVIGTPFWMA 167
Query: 682 -----------KSDVYSFGIILLRLLTGRP 700
K+D++S GI + + G+P
Sbjct: 168 PEVIQEIGYNNKADIWSLGITAIEMAEGKP 197
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 3e-16
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 47/186 (25%)
Query: 553 QVAIKMLHP----HSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606
VA+K+L P ++ + +F +E+ ILS++ PN+ L+G C ++ EY+ NG
Sbjct: 48 LVAVKVLRPDASDNARE---DFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENG 104
Query: 607 SLEDRLS--------CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658
L L NS LS+ T + +AT++ S + +L S + VH DL N
Sbjct: 105 DLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC 161
Query: 659 LLDANFVSKLSDF---------------------------EFLASGELTPKSDVYSFGII 691
L+ N+ K++DF E + G+ T KSDV++FG+
Sbjct: 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221
Query: 692 LLRLLT 697
L +LT
Sbjct: 222 LWEILT 227
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 50/207 (24%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVG 590
KIG G +G +Y L +A+K + + E E+ +L ++HPNLV G
Sbjct: 7 KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66
Query: 591 ACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHSCKP 645
EV + EY G+LE+ L + IR+ T +L L +LHS
Sbjct: 67 V--EVHREKVYIFMEYCSGGTLEELLEHGRILD----EHVIRVYTLQLLEGLAYLHSHG- 119
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF--------------EFLASGELTPK--------- 682
IVH D+KPANI LD N V KL DF E + S TP
Sbjct: 120 --IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITG 177
Query: 683 ---------SDVYSFGIILLRLLTGRP 700
+D++S G ++L + TG+
Sbjct: 178 GKGKGHGRAADIWSLGCVVLEMATGKR 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 44/199 (22%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGA 591
++G G G + K L R + + + +Q E+DIL K P +V GA
Sbjct: 8 ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGA 67
Query: 592 C---PEVWTLVYEYLPNGSLEDRL-SCKDNSP--PLSWQTRIRIATELCSVLIFLHSCKP 645
++ + EY+ GSL+ L + P L +IA + L +LH
Sbjct: 68 FYNNGDIS-ICMEYMDGGSLDKILKEVQGRIPERILG-----KIAVAVLKGLTYLHE--K 119
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEFLASGELT---------------P--------- 681
H I+H D+KP+NIL+++ KL DF SG+L P
Sbjct: 120 HKIIHRDVKPSNILVNSRGQIKLCDFG--VSGQLVNSLAKTFVGTSSYMAPERIQGNDYS 177
Query: 682 -KSDVYSFGIILLRLLTGR 699
KSD++S G+ L+ L TGR
Sbjct: 178 VKSDIWSLGLSLIELATGR 196
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 4e-16
Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 49/204 (24%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIK-MLHPHSLQGPSEF-QQEIDILSKIRHPNLVTLVG 590
+GEG YG + K + VAIK + + +E+ +L ++RH N+V L
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67
Query: 591 ACPEV--WTLVYEYLPNGSLEDRLSCKDNSPP-----LSWQTRIRIATELCSVLIFLHSC 643
A LV+EY+ LE + PP WQ L + + HS
Sbjct: 68 AFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQ--------LLQAIAYCHS- 118
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEF---------------------------LAS 676
H+I+H D+KP NIL+ + V KL DF F +
Sbjct: 119 --HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGD 176
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
DV++ G I+ LL G P
Sbjct: 177 TNYGKPVDVWAIGCIMAELLDGEP 200
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 5e-16
Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 535 KIGEGGYGSIYKG-----LLRHMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
K+G+G +G + +G + + VA+K L L +F +E I+ + H NL+ L
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61
Query: 589 VGACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G V T +V E P GSL DRL KD T A ++ + + +L S
Sbjct: 62 YGV---VLTHPLMMVTELAPLGSLLDRLR-KDALGHFLISTLCDYAVQIANGMRYLES-- 115
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+H DL NILL ++ K+ DF E L +
Sbjct: 116 -KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT 174
Query: 677 GELTPKSDVYSFGIILLRLLT 697
+ SDV+ FG+ L + T
Sbjct: 175 RTFSHASDVWMFGVTLWEMFT 195
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 6e-16
Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 79/236 (33%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML---HPHSLQGPSEFQQEIDILSKI-R 581
+F IGEG + ++ + + AIK+L + + E ++L+++
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60
Query: 582 HPNLVTLVGACPEVWT--------LVYEYLPNGSLED---RLSCKDNSPPLSWQTRIR-I 629
HP ++ L +T V EY PNG L + D + R
Sbjct: 61 HPGIIKLY------YTFQDEENLYFVLEYAPNGELLQYIRKYGSLD-------EKCTRFY 107
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
A E+ L +LHS I+H DLKP NILLD + K++DF
Sbjct: 108 AAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD 164
Query: 672 ---------------------------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E L SD+++ G I+ ++LTG+P
Sbjct: 165 ATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP 220
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 7e-16
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 53/209 (25%)
Query: 535 KIGEGGYGSIYKGL-LRHMQ-VAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVG 590
+IGEG YG +YK + + VA+K + + + P +EI +L K+RHPN+V L
Sbjct: 6 QIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK- 64
Query: 591 ACPEVWT--------LVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFL 640
E+ T +V+EY+ + L L + + Q + +L L +L
Sbjct: 65 ---EIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTES---QIK-CYMKQLLEGLQYL 116
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF------EFLASGELT-------------- 680
HS I+H D+K +NIL++ + V KL+DF S + T
Sbjct: 117 HSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELL 173
Query: 681 -------PKSDVYSFGIILLRLLTGRPAL 702
P+ D++S G IL L G+P
Sbjct: 174 LGATRYGPEVDMWSVGCILAELFLGKPIF 202
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 9e-16
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 44/250 (17%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+K+G+G +G ++ G +VAIK L P ++ P F QE ++ K+RH LV L
Sbjct: 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 70
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E +V EY+ GSL D L + L + +A ++ S + ++ + VH
Sbjct: 71 SEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 126
Query: 652 DLKPANILLDANFVSKLSDF---------EFLAS-----------------GELTPKSDV 685
DL+ ANIL+ N V K++DF E+ A G T KSDV
Sbjct: 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 686 YSFGIILLRLLT-GR-PALG-ITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742
+SFGI+L L T GR P G + +EV ++ G P + P E L +L +
Sbjct: 187 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM----PCPPECP----ESLHDLMCQ 238
Query: 743 CCEMSRKSRP 752
C + RP
Sbjct: 239 CWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-15
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 536 IGEGGYGSIYKG-------LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
+G G +GS+Y+G +V++ + + +QEI +LSK++HPN+V
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 589 VGACPEVWTL-VY-EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE-LCSVLIFLHSCKP 645
+G E L ++ E +P GSL L + P + IR+ T + L +LH
Sbjct: 68 LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFP----EPVIRLYTRQILLGLEYLHD--- 120
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF---------EFLASGELTP--------------- 681
+ VH D+K ANIL+D N V KL+DF F S + +P
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYG 180
Query: 682 -KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 720
+D++S G +L + TG+P + V G+ K L
Sbjct: 181 LAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL 220
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 1e-15
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 41/200 (20%)
Query: 536 IGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
+G+G +G +YK + + A K++ S + +F EIDILS+ +HPN+V L A
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
++W L+ E+ G+L D + + Q R + ++ L FLHS H ++H
Sbjct: 73 YENKLWILI-EFCDGGAL-DSIMLELERGLTEPQIRY-VCRQMLEALNFLHS---HKVIH 126
Query: 651 GDLKPANILLDANFVSKLSDFEFLASG--EL--------TP------------------- 681
DLK NILL + KL+DF A L TP
Sbjct: 127 RDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYD 186
Query: 682 -KSDVYSFGIILLRLLTGRP 700
K+D++S GI L+ L P
Sbjct: 187 YKADIWSLGITLIELAQMEP 206
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
+IGEG +G ++K + + VA+K + L+G P++ +EI L +HP +V L
Sbjct: 7 RIGEGAHGIVFKA--KDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKL 64
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+ + LV EY+P L + L +D PL L + ++H+ +
Sbjct: 65 LDVFPHGSGFVLVMEYMP-SDLSEVL--RDEERPLPEAQVKSYMRMLLKGVAYMHA---N 118
Query: 647 SIVHGDLKPANILLDANFVSKLSDF 671
I+H DLKPAN+L+ A+ V K++DF
Sbjct: 119 GIMHRDLKPANLLISADGVLKIADF 143
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 3e-15
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 41/196 (20%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
K+G G YG +Y+G+ + + VA+K L +++ EF +E ++ +I+HPNLV L+G C
Sbjct: 13 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 71
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNS--PPLSWQTRIRIATELCSVLIFLHSCKPHS 647
P + ++ E++ G+L D L + + + +AT++ S + +L +
Sbjct: 72 TREPPFY-IITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KN 124
Query: 648 IVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTP 681
+H DL N L+ N + K++DF E LA + +
Sbjct: 125 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 184
Query: 682 KSDVYSFGIILLRLLT 697
KSDV++FG++L + T
Sbjct: 185 KSDVWAFGVLLWEIAT 200
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 4e-15
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 83/291 (28%)
Query: 535 KIGEGGYGSIY----KGLLRHMQ------------VAIKMLHPHSLQGP-SEFQQEIDIL 577
K+GEG +G ++ +GL + VA+KML + ++F +EI I+
Sbjct: 12 KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71
Query: 578 SKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSL---------EDRLSCKDNSPPLSWQTR 626
S++++PN++ L+G C + ++ EY+ NG L E + +N P +S
Sbjct: 72 SRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANL 131
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------- 671
+ +A ++ S + +L S + VH DL N L+ ++ K++DF
Sbjct: 132 LYMAVQIASGMKYLASL---NFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQ 188
Query: 672 ------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKL 717
E + G+ T SDV++FG+ L + T + KE Y+L D +
Sbjct: 189 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT------LCKEQPYSLLSDEQVI 242
Query: 718 KNLLDPLAGDWPFVQAEQ------------LANLAMRCCEMSRKSRPELGK 756
+N G++ Q Q + L MRC K RP K
Sbjct: 243 EN-----TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 5e-15
Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 48/257 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVT 587
IG+G +G++ K +R + K + ++ E QQ E++IL +++HPN+V
Sbjct: 7 TIGKGSFGTVRK--VRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVR 63
Query: 588 ----LVGACPEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLH- 641
++ + +V EY G L + CK + + RI T+L L H
Sbjct: 64 YYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHN 123
Query: 642 -SCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLA 675
S ++++H DLKPANI LDAN KL DF E L
Sbjct: 124 RSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLN 183
Query: 676 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
KSD++S G ++ L P ++Q A K+K P+ + +
Sbjct: 184 HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA---SKIKEGKFR---RIPYRYSSE 237
Query: 736 LANLAMRCCEMSRKSRP 752
L + + RP
Sbjct: 238 LNEVIKSMLNVDPDKRP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 6e-15
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 64/267 (23%)
Query: 536 IGEGGYGSIYKGLLRH-------MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
+G+G +G +Y+GL + +VAIK ++ + S++ EF E ++ + ++V
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 588 LVGAC----PEVWTLVYEYLPNGSLEDRL-SCK------DNSPPLSWQTRIRIATELCSV 636
L+G P + +V E + G L+ L S + P + Q I++A E+
Sbjct: 74 LLGVVSTGQPTL--VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------------- 671
+ +L + K VH DL N ++ + K+ DF
Sbjct: 132 MAYLAAKK---FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 188
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKE--VQYALDTGKLKNLLDPLA 725
E L G T KSDV+SFG++L + T +P G++ E +++ +D G L
Sbjct: 189 APESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL-------- 240
Query: 726 GDWPFVQAEQLANLAMRCCEMSRKSRP 752
D P ++L L C + + K RP
Sbjct: 241 -DLPENCPDKLLELMRMCWQYNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 1e-14
Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 36/213 (16%)
Query: 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+K+G+G +G ++ G +VAIK L P ++ P F QE I+ K+RH LV L
Sbjct: 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-PEAFLQEAQIMKKLRHDKLVPLYAVV 70
Query: 593 PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E +V E++ GSL D L D L + +A ++ + ++ + +H
Sbjct: 71 SEEPIYIVTEFMGKGSLLDFLKEGDGKY-LKLPQLVDMAAQIADGMAYIERM---NYIHR 126
Query: 652 DLKPANILLDANFVSKLSDF---------EFLAS-----------------GELTPKSDV 685
DL+ ANIL+ N V K++DF E+ A G T KSDV
Sbjct: 127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 686 YSFGIILLRLLT-GR-PALG-ITKEVQYALDTG 715
+SFGI+L L+T GR P G + +EV ++ G
Sbjct: 187 WSFGILLTELVTKGRVPYPGMVNREVLEQVERG 219
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 60/210 (28%), Positives = 85/210 (40%), Gaps = 56/210 (26%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
I +G YG ++ L + AIK++ + ++ Q E DILS+ + P +V L
Sbjct: 1 ISKGAYGRVF--LAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL 58
Query: 589 VGACPEVWTL--VYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
+ L V EYLP G SL + + D RI IA E+ L +LHS
Sbjct: 59 YYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDED-----VARIYIA-EIVLALEYLHS- 111
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-------------------------------- 671
+ I+H DLKP NIL+D+N KL+DF
Sbjct: 112 --NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIA 169
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E + + D +S G IL L G P
Sbjct: 170 PEVILGQGHSKTVDWWSLGCILYEFLVGIP 199
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 2e-14
Identities = 75/293 (25%), Positives = 119/293 (40%), Gaps = 77/293 (26%)
Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNL 585
+GEG +G + K ++ VA+KML ++ SE + E ++L ++ HP++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHV 65
Query: 586 VTLVGACP--EVWTLVYEYLPNGSLE------------------DRLSCKDNSP---PLS 622
+ L GAC L+ EY GSL +R S ++P L+
Sbjct: 66 IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------- 671
I A ++ + +L K +VH DL N+L+ K+SDF
Sbjct: 126 MGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS 182
Query: 672 ----------------EFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYALD 713
E L T +SDV+SFG++L ++T G P GI E
Sbjct: 183 YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE------ 236
Query: 714 TGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
+L NLL + P +E++ NL + C + RP D+ + LE M
Sbjct: 237 --RLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTF-ADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 2e-14
Identities = 58/200 (29%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
IG+G +G +YK + + VAIK++ + + QQEI LS+ R P + G+
Sbjct: 8 CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGS 67
Query: 592 CPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ L + EY GS D L L I E+ L +LH +
Sbjct: 68 FLKGSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGK---I 120
Query: 650 HGDLKPANILLDANFVSKLSDFEFLASGEL------------TP---------------K 682
H D+K ANILL KL+DF SG+L TP K
Sbjct: 121 HRDIKAANILLSEEGDVKLADFG--VSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEK 178
Query: 683 SDVYSFGIILLRLLTGRPAL 702
+D++S GI + L G P L
Sbjct: 179 ADIWSLGITAIELAKGEPPL 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 3e-14
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 35/189 (18%)
Query: 533 SLKIGEGGYGSIYKGL-LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
+IG G +G ++ G L +VAIK + ++ +F +E ++ K+ HP LV L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 592 CPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
C E LV+E++ +G L D L + S +T + + ++C + +L S +++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYLRAQRGK--FSQETLLGMCLDVCEGMAYLES---SNVI 122
Query: 650 HGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKS 683
H DL N L+ N V K+SDF E + + + KS
Sbjct: 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKS 182
Query: 684 DVYSFGIIL 692
DV+SFG+++
Sbjct: 183 DVWSFGVLM 191
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 4e-14
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 52/218 (23%)
Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLV 589
IGEG +G + + +++ M AIKML + + +F E+++L K+ HPN++ L+
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 590 GACPEVWTL--VYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELC 634
GAC L EY P G+L D L + L+ Q ++ A+++
Sbjct: 70 GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGE---------------- 678
+ + +L +H DL N+L+ N SK++DF L+ GE
Sbjct: 130 TGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFG-LSRGEEVYVKKTMGRLPVRWM 185
Query: 679 ---------LTPKSDVYSFGIILLRL--LTGRPALGIT 705
T KSDV+SFG++L + L G P G+T
Sbjct: 186 AIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 5e-14
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 75/289 (25%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
IG+G +G +++ GLL + VA+KML S ++FQ+E ++++ HPN+V
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72
Query: 588 LVGACP--EVWTLVYEYLPNGSLEDRL-------------------SCKDNSPPLSWQTR 626
L+G C + L++EY+ G L + L C N PLS +
Sbjct: 73 LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------- 671
+ IA ++ + + +L K VH DL N L+ N V K++DF
Sbjct: 133 LCIAKQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189
Query: 672 ------------EFLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGK 716
E + T +SDV+++G++L + + +P G+ +EV Y + G
Sbjct: 190 ENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN 249
Query: 717 LKNLLD--PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763
+ + D PL +L NL C RP + R+L+
Sbjct: 250 VLSCPDNCPL----------ELYNLMRLCWSKLPSDRPSFA-SINRILQ 287
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 73.3 bits (181), Expect = 5e-14
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 45/199 (22%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ------EIDILSKIRHPNL 585
+G G +G + L+RH A+K+L + + +Q E IL IRHP L
Sbjct: 9 LGTGSFGRVM--LVRHKGSGKYYALKILSKAKI---VKLKQVEHVLNEKRILQSIRHPFL 63
Query: 586 VTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
V L G+ + L V EY+P G L L K P R A ++ L +LHS
Sbjct: 64 VNLYGSFQDDSNLYLVMEYVPGGELFSHLR-KSGRFPEP-VARFYAA-QVVLALEYLHSL 120
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-----------------EFLASGELTPK---- 682
IV+ DLKP N+LLD++ K++DF E+LA + K
Sbjct: 121 D---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGK 177
Query: 683 -SDVYSFGIILLRLLTGRP 700
D ++ GI++ +L G P
Sbjct: 178 AVDWWALGILIYEMLAGYP 196
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 7e-14
Identities = 60/221 (27%), Positives = 85/221 (38%), Gaps = 67/221 (30%)
Query: 536 IGEGGYGSIYKGLLRHMQV-----AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+G GG+G + ++ +K H E +IL + HP +V L
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60
Query: 591 -------------ACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
C E+WT++ + G ++ + R IA C
Sbjct: 61 TFKDKKYIYMLMEYCLGGELWTILRD---RGLFDE------------YTARFYIA---CV 102
Query: 636 VLIF--LHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---LASGELT---------- 680
VL F LH+ I++ DLKP N+LLD+N KL DF F L SG+ T
Sbjct: 103 VLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYV 159
Query: 681 -PK----------SDVYSFGIILLRLLTGRPALGITKEVQY 710
P+ D +S GI+L LLTGRP G E
Sbjct: 160 APEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM 200
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 8e-14
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 53/209 (25%)
Query: 535 KIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSE---FQ--QEIDILSKIRHPNLVT 587
K+GEG Y +YK + VAIK + + + F +EI +L +++HPN++
Sbjct: 7 KLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG 66
Query: 588 LVGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFL 640
L+ +V+ LV+E++ LE + KD S L+ I+ L +L
Sbjct: 67 LL----DVFGHKSNINLVFEFME-TDLEKVI--KDKSIVLT-PADIKSYMLMTLRGLEYL 118
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------SGELTPK------------ 682
HS + I+H DLKP N+L+ ++ V KL+DF LA + ++T +
Sbjct: 119 HS---NWILHRDLKPNNLLIASDGVLKLADFG-LARSFGSPNRKMTHQVVTRWYRAPELL 174
Query: 683 ---------SDVYSFGIILLRLLTGRPAL 702
D++S G I LL P L
Sbjct: 175 FGARHYGVGVDMWSVGCIFAELLLRVPFL 203
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 1e-13
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 44/249 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G G +G ++ G + +VA+K L P ++ P F +E I+ K+RH LV L
Sbjct: 13 KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVS 71
Query: 594 E-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
E +V EY+ GSL D L + L + +A ++ + + ++ + +H D
Sbjct: 72 EEPIYIVTEYMSKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIERM---NYIHRD 127
Query: 653 LKPANILLDANFVSKLSDF---------EFLAS-----------------GELTPKSDVY 686
L+ ANIL+ V K++DF E+ A G T KSDV+
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187
Query: 687 SFGIILLRLLT-GR-PALGI-TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
SFGI+L L+T GR P G+ +EV ++ G P D P L L ++C
Sbjct: 188 SFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM----PCPQDCPI----SLHELMLQC 239
Query: 744 CEMSRKSRP 752
+ + RP
Sbjct: 240 WKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 1e-13
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 35/203 (17%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNL 585
NF K+GEG Y ++YKG R VA+K +H + +G PS +EI ++ +++H N+
Sbjct: 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60
Query: 586 VTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
V L V LV+EY+ + L+ + L T +L + F C
Sbjct: 61 VRLHDVIHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAF---C 116
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFE--------------------------FLASG 677
+ ++H DLKP N+L++ KL+DF L S
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSR 176
Query: 678 ELTPKSDVYSFGIILLRLLTGRP 700
+ D++S G I+ ++TGRP
Sbjct: 177 TYSTSIDIWSVGCIMAEMITGRP 199
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 65/218 (29%), Positives = 86/218 (39%), Gaps = 62/218 (28%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
IGEG YG +YK + VAIK++ E ++E +IL K HPN+ T GA
Sbjct: 14 IGEGTYGKVYKARHKKTGQLVAIKIMDI-IEDEEEEIKEEYNILRKYSNHPNIATFYGAF 72
Query: 593 ---------PEVWTLVYEYLPNGSLED---RLSCKDNSPPLSWQTRIRIA---TELCSVL 637
++W LV E GS+ D L K W IA E L
Sbjct: 73 IKKNPPGNDDQLW-LVMELCGGGSVTDLVKGLRKKGKRLKEEW-----IAYILRETLRGL 126
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGEL------------TP---- 681
+LH + ++H D+K NILL N KL DF S +L TP
Sbjct: 127 AYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG--VSAQLDSTLGRRNTFIGTPYWMA 181
Query: 682 ----------------KSDVYSFGIILLRLLTGRPALG 703
+SDV+S GI + L G+P L
Sbjct: 182 PEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 2e-13
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 59/219 (26%)
Query: 535 KIGEGGYGSIY----KGLLRHMQ--------------VAIKMLHPHSLQGP-SEFQQEID 575
K+GEG +G ++ +G+ + M VA+KML + + ++F +EI
Sbjct: 12 KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71
Query: 576 ILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS--------CKDNSPPLSWQT 625
I+S+++ PN++ L+ C L + EY+ NG L LS K + +S+ T
Sbjct: 72 IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST 131
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------- 671
I +AT++ S + +L S + VH DL N L+ N+ K++DF
Sbjct: 132 LIFMATQIASGMKYLSSL---NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRI 188
Query: 672 -------------EFLASGELTPKSDVYSFGIILLRLLT 697
E + G+ T SDV++FG+ L +LT
Sbjct: 189 QGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.5 bits (172), Expect = 4e-13
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 52/218 (23%)
Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLV 589
IGEG +G + K ++ M AIK + ++ + +F E+++L K+ HPN++ L+
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 590 GACPEVWTL--VYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELC 634
GAC L EY P+G+L D L + LS Q + A ++
Sbjct: 63 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGE---------------- 678
+ +L +H DL NIL+ N+V+K++DF L+ G+
Sbjct: 123 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG-LSRGQEVYVKKTMGRLPVRWM 178
Query: 679 ---------LTPKSDVYSFGIILLRL--LTGRPALGIT 705
T SDV+S+G++L + L G P G+T
Sbjct: 179 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 6e-13
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 43/218 (19%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPS-EFQQEIDILSKIRHPNLVTL 588
+G G +G++YKG+ + VAIK+L + + E E +++ + HP++V L
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 589 VGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C L+ + +P G L D + +++ + Q + ++ + +L
Sbjct: 75 LGICLSSQVQLITQLMPLGCLLDYV--RNHKDNIGSQYLLNWCVQIAKGMSYLEE---KR 129
Query: 648 IVHGDLKPANILLDANFVSKLSDF-----------EFLASGELTP--------------- 681
+VH DL N+L+ K++DF E+ A G P
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYT 189
Query: 682 -KSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTG 715
KSDV+S+G+ + L+T +P GI E+ L+ G
Sbjct: 190 HKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 8e-13
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 71/228 (31%)
Query: 535 KIGEGGYGSIY--------------------KGLLRHMQVAIKMLHPHSLQGP-SEFQQE 573
K+GEG +G ++ KG R + VA+K+L P + + ++F +E
Sbjct: 12 KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKG--RPLLVAVKILRPDANKNARNDFLKE 69
Query: 574 IDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK----------DNSPP- 620
+ ILS+++ PN++ L+G C + ++ EY+ NG L LS D PP
Sbjct: 70 VKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPA 129
Query: 621 -----LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---- 671
+S+ + + +A ++ S + +L S + VH DL N L+ N K++DF
Sbjct: 130 HCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRDLATRNCLVGENLTIKIADFGMSR 186
Query: 672 -----------------------EFLASGELTPKSDVYSFGIILLRLL 696
E + G+ T SDV++FG+ L +L
Sbjct: 187 NLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 9e-13
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 50/257 (19%)
Query: 536 IGEGGYGSIYKGLLRHMQ-VAIKM--LHPHS-LQGPSEF---QQEIDILSKIRHPNLVTL 588
+G+G YG++Y GL Q +A+K L + L E+ Q+E+D+L ++H N+V
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+G C + T+ E++P GS+ L + PL + ++ + +LH+ +
Sbjct: 68 LGTCLDDNTISIFMEFVPGGSISSIL---NRFGPLPEPVFCKYTKQILDGVAYLHN---N 121
Query: 647 SIVHGDLKPANILLDANFVSKLSDF----------------EFLASGELTP--------- 681
+VH D+K N++L N + KL DF L S TP
Sbjct: 122 CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN 181
Query: 682 ------KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
KSD++S G + + TG+P L + G + L+ L P +
Sbjct: 182 ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRL----PDSFSAA 237
Query: 736 LANLAMRCCEMSRKSRP 752
+ C + RP
Sbjct: 238 AIDFVTSCLTRDQHERP 254
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 1e-12
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 42/249 (16%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-P 593
IGEG +G++ +G +VA+K + F +E +++K+ H NLV L+G
Sbjct: 13 IIGEGEFGAVLQGEYTGQKVAVKNIKCDVTA--QAFLEETAVMTKLHHKNLVRLLGVILH 70
Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
+V E + G+L + L + + +S ++ + ++ + +L S K +VH DL
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLESKK---LVHRDL 126
Query: 654 KPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSFGII 691
NIL+ + V+K+SDF E L + + KSDV+S+G++
Sbjct: 127 AARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVL 186
Query: 692 LLRLLT-GR---PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMS 747
L + + GR P + + KEV+ ++ G ++P G V L C E
Sbjct: 187 LWEVFSYGRAPYPKMSL-KEVKECVEKGY---RMEPPEGCPADVYV-----LMTSCWETE 237
Query: 748 RKSRPELGK 756
K RP K
Sbjct: 238 PKKRPSFHK 246
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 1e-12
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 33/183 (18%)
Query: 536 IGEGGYGSIYKGLLRHMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
IG+G +G + G R +VA+K + + + Q F E +++++RH NLV L+G E
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 595 ---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+V EY+ GSL D L + S L ++ + ++C + +L + ++ VH
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEA---NNFVHR 126
Query: 652 DLKPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSFG 689
DL N+L+ + V+K+SDF E L + + KSDV+SFG
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 186
Query: 690 IIL 692
I+L
Sbjct: 187 ILL 189
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 1e-12
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 55/270 (20%)
Query: 536 IGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
IG G +G +++G+L+ + VAIK L P ++ + +F E I+ + H N++ L
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G + ++ EY+ NG+L+ L D + ++ L + + +
Sbjct: 73 GVVTKFKPAMIITEYMENGALDKYLRDHDGE-----FSSYQLVGMLRGIAAGMKYLSDMN 127
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGEL 679
VH DL NIL+++N K+SDF E +A +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 680 TPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG-KLKNLLDPLAGDWPFVQAEQ 735
T SDV+SFGI++ +++ RP ++ EV A++ G +L P D P
Sbjct: 188 TSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL-----PAPMDCP----SA 238
Query: 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
+ L ++C + R RP D+ +L+ +
Sbjct: 239 VYQLMLQCWQQDRARRPRFV-DIVNLLDKL 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL-- 588
KIGEG YG +YKG + VA+K + S + PS +EI +L +++HPN+V L
Sbjct: 7 KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD 66
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
V L++E+L + L+ L D+ P + + + L +L + C +
Sbjct: 67 VLMQESRLYLIFEFL-SMDLKKYL---DSLPKGQYMDAELVKSYLYQILQGILFCHSRRV 122
Query: 649 VHGDLKPANILLDANFVSKLSDF 671
+H DLKP N+L+D V KL+DF
Sbjct: 123 LHRDLKPQNLLIDNKGVIKLADF 145
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 54/210 (25%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
D +KIGEG G + + QVA+K + Q E+ I+ +HPN+V
Sbjct: 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79
Query: 587 T-----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVL- 637
LVG E+W +V E+L G+L D ++ TR+ +IAT +VL
Sbjct: 80 EMYSSYLVG--DELW-VVMEFLEGGALTDIVT----------HTRMNEEQIATVCLAVLK 126
Query: 638 --IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--SGEL--------TP---- 681
FLH+ ++H D+K +ILL ++ KLSDF F A S E+ TP
Sbjct: 127 ALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMA 183
Query: 682 -----------KSDVYSFGIILLRLLTGRP 700
+ D++S GI+++ ++ G P
Sbjct: 184 PEVISRLPYGTEVDIWSLGIMVIEMVDGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 2e-12
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
KIG+G G++Y + +VAIK ++ EI ++ + +HPN+V + +
Sbjct: 26 KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85
Query: 592 --CPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
E+W +V EYL GSL D ++ C D + + E L FLHS +
Sbjct: 86 LVGDELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS---NQ 135
Query: 648 IVHGDLKPANILLDANFVSKLSDFEFLAS-------------------------GELTPK 682
++H D+K NILL + KL+DF F A PK
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 195
Query: 683 SDVYSFGIILLRLLTGRP 700
D++S GI+ + ++ G P
Sbjct: 196 VDIWSLGIMAIEMVEGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
+IG G YG +YK VAIK++ QQEI +L + RHPN+V G+
Sbjct: 10 RIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY 69
Query: 592 --CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
++W +V EY GSL+D + PLS + E L +LH +
Sbjct: 70 LRRDKLW-IVMEYCGGGSLQDIY--QVTRGPLSELQIAYVCRETLKGLAYLHETG---KI 123
Query: 650 HGDLKPANILLDANFVSKLSDF 671
H D+K ANILL + KL+DF
Sbjct: 124 HRDIKGANILLTEDGDVKLADF 145
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 75/239 (31%), Positives = 105/239 (43%), Gaps = 59/239 (24%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLH-PHSLQG-PSEFQQEIDILSKIR---HPNLV 586
IGEG YG++YK R + VA+K + P S +G P +EI +L ++ HPN+V
Sbjct: 7 IGEGAYGTVYKA--RDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64
Query: 587 TLVGAC--PEVW-----TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
L+ C P TLV+E++ + L LS K P L +T + +L + F
Sbjct: 65 RLLDVCHGPRTDRELKLTLVFEHV-DQDLATYLS-KCPKPGLPPETIKDLMRQLLRGVDF 122
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDF------EF-------------------L 674
LHS H IVH DLKP NIL+ ++ K++DF F L
Sbjct: 123 LHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLL 179
Query: 675 ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD----PLAGDWP 729
S TP D++S G I L RP T E +L + D P +WP
Sbjct: 180 QSSYATP-VDMWSVGCIFAELFRRRPLFRGTSEAD------QLDKIFDVIGLPSEEEWP 231
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 3e-12
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 59/271 (21%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGP-SEFQQEIDILSKI 580
N +G G +G ++ + ++ V +K L + SEF++E+D+ K+
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65
Query: 581 RHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRL------SCKDNSPPLSWQTRIRIATE 632
H N+V L+G C E ++ EY G L+ L K PPLS + ++ + T+
Sbjct: 66 SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS----------------------- 669
+ + L + VH DL N L+ + K+S
Sbjct: 126 IALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPL 182
Query: 670 ---DFEFLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDP 723
E + + + KSDV+SFG+++ + T P G++ +EV L GKL+
Sbjct: 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE----- 237
Query: 724 LAGDWPFVQA--EQLANLAMRCCEMSRKSRP 752
P + +L L RC ++ K RP
Sbjct: 238 ----LPVPEGCPSRLYKLMTRCWAVNPKDRP 264
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 43/200 (21%)
Query: 536 IGEGGYGSIYKGLLRHMQ------VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
+G+G +GS+ +Q VA+K L + + +F++EI+IL ++H N+V
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71
Query: 590 GACPEV----WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
G C LV EYLP GSL D L + L + + A+++C + +L S +
Sbjct: 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQ--KHRERLDHRKLLLYASQICKGMEYLGSKR- 128
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASG 677
VH DL NIL+++ K+ DF E L
Sbjct: 129 --YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTES 186
Query: 678 ELTPKSDVYSFGIILLRLLT 697
+ + SDV+SFG++L L T
Sbjct: 187 KFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 4e-12
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 49/203 (24%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
IG+G +G +Y G L + + A+K L+ L+ +F +E I+ HPN+++L+
Sbjct: 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
G C P V V Y+ +G L + + + ++P + + I ++ + +L S
Sbjct: 63 GICLPSEGSPLV---VLPYMKHGDLRNFIRSETHNPTV--KDLIGFGLQVAKGMEYLASK 117
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-----------------------------EFL 674
K VH DL N +LD +F K++DF E L
Sbjct: 118 K---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL 174
Query: 675 ASGELTPKSDVYSFGIILLRLLT 697
+ + T KSDV+SFG++L L+T
Sbjct: 175 QTQKFTTKSDVWSFGVLLWELMT 197
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 5e-12
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 52/212 (24%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
++GEG +G ++ + M VA+K L +L +FQ+E ++L+ ++H ++V
Sbjct: 12 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71
Query: 588 LVGAC--PEVWTLVYEYLPNGSLE--------DRLSCKDNSP-----PLSWQTRIRIATE 632
G C + +V+EY+ +G L D + D P L + IA++
Sbjct: 72 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------- 671
+ S +++L S VH DL N L+ AN + K+ DF
Sbjct: 132 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 188
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLT 697
E + + T +SDV+SFG+IL + T
Sbjct: 189 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT 220
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 6e-12
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 43/202 (21%)
Query: 536 IGEGGYGSIYKGL-------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
+G+G +G +Y L QV P + + + + EI +L ++H +V
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69
Query: 589 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
G E ++ EY+P GS++D+L L+ + ++ + +LHS +
Sbjct: 70 YGCLRDDETLSIFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHS---N 123
Query: 647 SIVHGDLKPANILLDANFVSKLSDF-------------EFLASGELTP------------ 681
IVH D+K ANIL D+ KL DF + S TP
Sbjct: 124 MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG 183
Query: 682 ---KSDVYSFGIILLRLLTGRP 700
K+DV+S G ++ +LT +P
Sbjct: 184 YGRKADVWSVGCTVVEMLTEKP 205
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 6e-12
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKM--LHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
KIGEG YG +YK R +A+K L PS +EI +L +++H N+V L
Sbjct: 9 KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
V + LV+EYL + L+ + D+SP + R+ I T L +L + C H +
Sbjct: 69 VVHSEKRLYLVFEYL-DLDLKKHM---DSSPDFAKNPRL-IKTYLYQILRGIAYCHSHRV 123
Query: 649 VHGDLKPANILLD-ANFVSKLSDF 671
+H DLKP N+L+D KL+DF
Sbjct: 124 LHRDLKPQNLLIDRRTNALKLADF 147
|
Length = 294 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 7e-12
Identities = 71/263 (26%), Positives = 113/263 (42%), Gaps = 54/263 (20%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
IG G +G + G L R + VAIK L ++ + +F E I+ + HPN++ L
Sbjct: 12 IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71
Query: 590 GA---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
G V +V EY+ NGSL+ L D T I++ L + +
Sbjct: 72 GVVTKSKPV-MIVTEYMENGSLDAFLRKHDGQ-----FTVIQLVGMLRGIASGMKYLSDM 125
Query: 647 SIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGE 678
VH DL NIL+++N V K+SDF E +A +
Sbjct: 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 185
Query: 679 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
T SDV+S+GI++ +++ RP ++ ++V A++ G L P+ D P
Sbjct: 186 FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG--YRLPAPM--DCPAA---- 237
Query: 736 LANLAMRCCEMSRKSRPELGKDV 758
L L + C + R RP+ + V
Sbjct: 238 LHQLMLDCWQKDRNERPKFEQIV 260
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 7e-12
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 50/217 (23%)
Query: 536 IGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLV 589
IGEG +G + K ++ M AIK + ++ + +F E+++L K+ HPN++ L+
Sbjct: 15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74
Query: 590 GACPE--VWTLVYEYLPNGSLEDRLS-------------CKDNSPPLSWQTRIRIATELC 634
GAC L EY P+G+L D L + LS Q + A ++
Sbjct: 75 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------- 671
+ +L +H DL NIL+ N+V+K++DF
Sbjct: 135 RGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 191
Query: 672 -EFLASGELTPKSDVYSFGIILLRL--LTGRPALGIT 705
E L T SDV+S+G++L + L G P G+T
Sbjct: 192 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 7e-12
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
KIGEG YG +YK R VA+K + +G PS +EI +L ++ HPN+V L
Sbjct: 6 KIGEGTYGVVYKA--RDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRL 63
Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSCK 644
V LV+E+L + L+ + D+SP + +L + + HS
Sbjct: 64 LDVVHSENKLYLVFEFL-DLDLKKYM---DSSPLTGLDPPLIKSYLYQLLQGIAYCHS-- 117
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF 671
H ++H DLKP N+L+D KL+DF
Sbjct: 118 -HRVLHRDLKPQNLLIDREGALKLADF 143
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 7e-12
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 46/250 (18%)
Query: 535 KIGEGGYGSIYKGLL-RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G G +G ++ +H +VA+K + P S+ F E +++ ++H LV L
Sbjct: 13 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVT 71
Query: 594 -EVWTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E ++ E++ GSL D L + + PL I + ++ + F+ + +H
Sbjct: 72 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ---RNYIHR 126
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL+ ANIL+ A+ V K++DF E + G T KSDV
Sbjct: 127 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 186
Query: 686 YSFGIILLRLLT-GR-PALGITK-EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742
+SFGI+L+ ++T GR P G++ EV AL+ G + E+L N+ MR
Sbjct: 187 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC--------PEELYNIMMR 238
Query: 743 CCEMSRKSRP 752
C + + RP
Sbjct: 239 CWKNRPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 56/210 (26%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLH----PHSLQGPSEFQQEIDILSKIRHPNLVT- 587
IG G +Y L + +VAIK + S+ E ++E+ +S+ HPN+V
Sbjct: 8 VIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVD---ELRKEVQAMSQCNHPNVVKY 64
Query: 588 ----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL---IFL 640
+VG E+W LV YL GSL D + +S P IAT L VL +L
Sbjct: 65 YTSFVVGD--ELW-LVMPYLSGGSLLDIMK---SSYPRGGLDEAIIATVLKEVLKGLEYL 118
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLASGEL-----------TP----- 681
HS + +H D+K NILL + K++DF LA G TP
Sbjct: 119 HS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAP 175
Query: 682 -----------KSDVYSFGIILLRLLTGRP 700
K+D++SFGI + L TG
Sbjct: 176 EVMEQVHGYDFKADIWSFGITAIELATGAA 205
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 8e-12
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 47/191 (24%)
Query: 553 QVAIKML---HPHSLQGPSEFQQEIDILSKIRHPNLVTLV--GACPEVWTL-VYEYLPNG 606
+VAIK+L P + F++E + +++ HPN+V L+ G P V+EY+P
Sbjct: 5 EVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGR 64
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV- 665
+L + L+ L R+ ++ L H+ IVH DLKP NI++ V
Sbjct: 65 TLREVLA---ADGALPAGETGRLMLQVLDALACAHN---QGIVHRDLKPQNIMVSQTGVR 118
Query: 666 --SKLSDF---------------------EFLAS----------GE-LTPKSDVYSFGII 691
+K+ DF E L + GE +TP SD+Y++G+I
Sbjct: 119 PHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLI 178
Query: 692 LLRLLTGRPAL 702
L LTG+ +
Sbjct: 179 FLECLTGQRVV 189
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 8e-12
Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKM--LHPHSLQGPSEFQQEIDILSKIRH 582
NF KIGEG YG +YK R+ VA+K L + PS +EI +L ++ H
Sbjct: 1 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 58
Query: 583 PNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
PN+V L V LV+E+L +D D SP + I + L +L L
Sbjct: 59 PNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASPLSGIPLPL-IKSYLFQLLQGL 113
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
C H ++H DLKP N+L++ KL+DF
Sbjct: 114 AFCHSHRVLHRDLKPQNLLINTEGAIKLADF 144
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 9e-12
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 35/192 (18%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
++G G +G + G R VAIKM+ S+ EF +E ++ K+ H LV L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLYGVCT 69
Query: 594 EVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+ +V EY+ NG L + L +++ + + ++C + +L S +H
Sbjct: 70 KQRPIYIVTEYMSNGCLLNYL--REHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHR 124
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL N L+D K+SDF E L + + KSDV
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDV 184
Query: 686 YSFGIILLRLLT 697
++FG+++ + +
Sbjct: 185 WAFGVLMWEVYS 196
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 9e-12
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 50/204 (24%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ------QEIDILSKIRHPN 584
+GEG YG + K +H + VAIK L+ + +EI +L ++RH N
Sbjct: 8 LVGEGSYGMVMK--CKHKETGQIVAIKKF----LESEDDKMVKKIAMREIRMLKQLRHEN 61
Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
LV L+ + LV+E++ + L+D L N L + ++ + F HS
Sbjct: 62 LVNLIEVFRRKKRLYLVFEFVDHTVLDD-LEKYPNG--LDESRVRKYLFQILRGIEFCHS 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFEF---LASG----------------ELTPKS 683
H+I+H D+KP NIL+ + V KL DF F LA+ EL
Sbjct: 119 ---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD 175
Query: 684 -------DVYSFGIILLRLLTGRP 700
D+++ G ++ +LTG P
Sbjct: 176 TKYGRAVDIWAVGCLVTEMLTGEP 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 1e-11
Identities = 59/260 (22%), Positives = 97/260 (37%), Gaps = 50/260 (19%)
Query: 536 IGEGGYGSIYKGLL----RHMQVAIKMLHPHSLQGPSEFQQ--------EIDILSKIRHP 583
IG+G YG +Y L M V L Q+ EI+ L + H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 584 NLVTLVG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
N+V +G E ++ EY+P GS+ SC Q ++ L +LH
Sbjct: 69 NIVQYLGFETTEEYLSIFLEYVPGGSIG---SCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFE---------------------FLASGEL- 679
S I+H DLK N+L+DA+ + K+SDF F + E+
Sbjct: 126 S---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVI 182
Query: 680 -------TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732
+ K D++S G ++L + GR + + G ++ P+ D
Sbjct: 183 HSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRS-APPIPPDVSMNL 241
Query: 733 AEQLANLAMRCCEMSRKSRP 752
+ + C ++ +RP
Sbjct: 242 SPVALDFLNACFTINPDNRP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 1e-11
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 58/266 (21%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
IG G +G + +G L+ + VAIK L ++ + +F E I+ + HPN++ L
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71
Query: 590 G----ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
G + P + ++ E++ NG+L+ L D T I++ L + +
Sbjct: 72 GVVTKSRPVM--IITEFMENGALDSFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYLSE 124
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF------------------------------EFLA 675
+ VH DL NIL+++N V K+SDF E +A
Sbjct: 125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIA 184
Query: 676 SGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQ 732
+ T SDV+S+GI++ +++ RP ++ ++V A++ ++ P D P
Sbjct: 185 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE----QDYRLPPPMDCPTA- 239
Query: 733 AEQLANLAMRCCEMSRKSRPELGKDV 758
L L + C + R +RP+ G+ V
Sbjct: 240 ---LHQLMLDCWQKDRNARPKFGQIV 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL 588
IGEG +G +Y+G+ + VA+K + E F QE I+ + HP++V L
Sbjct: 13 CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+G E VW +V E P G L L S L+ + I + +L + L +L S +
Sbjct: 73 IGVITENPVW-IVMELAPLGELRSYLQVNKYSLDLA--SLILYSYQLSTALAYLESKR-- 127
Query: 647 SIVHGDLKPANILLDANFVSKLSDF 671
VH D+ N+L+ + KL DF
Sbjct: 128 -FVHRDIAARNVLVSSPDCVKLGDF 151
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 2e-11
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPN 584
F ++G+GGYG ++ + VA+K + L +E + E DIL+ +
Sbjct: 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW 62
Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSW-QTRIRIATELCSVLIFLH 641
LV L+ A E L EY+P G L+ N LS R +A +V
Sbjct: 63 LVKLLYAFQDDEYLYLAMEYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAV----D 115
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELT 680
+ +H DLKP N L+DA+ KL+DF L+ G +T
Sbjct: 116 ALHELGYIHRDLKPENFLIDASGHIKLTDFG-LSKGIVT 153
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 2e-11
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 53/205 (25%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGP----SEFQQEIDILSKIRH---PN 584
IG G YG++Y+G H+ VA+K++ +L P S+ Q+E+ +LS++R PN
Sbjct: 9 IGRGAYGAVYRGK--HVPTGRVVALKII---NLDTPDDDVSDIQREVALLSQLRQSQPPN 63
Query: 585 LVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
+ G+ P +W ++ EY GS+ + + P++ + I E+ L ++H
Sbjct: 64 ITKYYGSYLKGPRLW-IIMEYAEGGSVRTLM----KAGPIAEKYISVIIREVLVALKYIH 118
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLASGEL-------TP---------- 681
++H D+K ANIL+ KL DF L TP
Sbjct: 119 K---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITE 175
Query: 682 ------KSDVYSFGIILLRLLTGRP 700
K+D++S GI + + TG P
Sbjct: 176 GKYYDTKADIWSLGITIYEMATGNP 200
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 2e-11
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 48/203 (23%)
Query: 536 IGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGPS-EFQQEIDILSKIRHPNLV 586
+GEG +G + L R+ QVA+K L P S + ++EI+IL + H N+V
Sbjct: 12 LGEGHFGKVE--LCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 69
Query: 587 TLVGACPEVW----TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
G C E L+ E+LP+GSL++ L N ++ + +++ A ++C + +L S
Sbjct: 70 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP--RNKNKINLKQQLKYAVQICKGMDYLGS 127
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFL 674
VH DL N+L+++ K+ DF E L
Sbjct: 128 ---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL 184
Query: 675 ASGELTPKSDVYSFGIILLRLLT 697
+ SDV+SFG+ L LLT
Sbjct: 185 IQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-11
Identities = 74/270 (27%), Positives = 111/270 (41%), Gaps = 43/270 (15%)
Query: 527 THNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIR 581
NF KIG+G + +YK LL VA+K + + Q +EID+L ++
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 582 HPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLI 638
HPN++ + + E L V E G L + K + +T + +LCS L
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLASGEL-------TP------- 681
+HS I+H D+KPAN+ + A V KL D F +S TP
Sbjct: 121 HMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177
Query: 682 --------KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733
KSD++S G +L + + K Y+L K PL D +
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPAD---HYS 234
Query: 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLE 763
E+L +L RC + RP D+ VL+
Sbjct: 235 EELRDLVSRCINPDPEKRP----DISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 3e-11
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 40/177 (22%)
Query: 554 VAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTLVYEYLPNGSL 608
VA+K L Q S +++EI+IL + H N+V G C E L+ EY+P GSL
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668
D L K L+ + A ++C + +LHS +H DL N+LLD + + K+
Sbjct: 96 RDYLP-KHK---LNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKI 148
Query: 669 SDF----------------------------EFLASGELTPKSDVYSFGIILLRLLT 697
DF E L + + SDV+SFG+ L LLT
Sbjct: 149 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILSKIRHPNLVTLVGA 591
+G G +G ++ + V IK + + Q E +L + HPN++
Sbjct: 8 VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67
Query: 592 CPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
E L V EY P G+L + + + NS L T + + +L+ LH I+
Sbjct: 68 FLEDKALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQ---ILLALHHVHTKLIL 123
Query: 650 HGDLKPANILLDAN-FVSKLSDFEFLASGELTPKSDVYS 687
H DLK NILLD + V K+ DF S L+ KS Y+
Sbjct: 124 HRDLKTQNILLDKHKMVVKIGDFGI--SKILSSKSKAYT 160
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 4e-11
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 63/276 (22%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQ-VAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVT 587
++GE +G IYKG L H Q VAIK L + Q EFQQE +++++ HPN+V
Sbjct: 12 ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71
Query: 588 LVGACPEVW--TLVYEYLPNGSLEDRL---------SCKDNS-----PPLSWQTRIRIAT 631
L+G + +++EYL G L + L C + L + IA
Sbjct: 72 LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
++ + + +L S H VH DL NIL+ K+SD
Sbjct: 132 QIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188
Query: 672 -------EFLASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALDTGKLKNLLD 722
E + G+ + SD++SFG++L + + +P G + Q ++ + + LL
Sbjct: 189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMVRKRQLL- 245
Query: 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758
P + D P ++ +L C + RP KD+
Sbjct: 246 PCSEDCP----PRMYSLMTECWQEGPSRRPRF-KDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 63/268 (23%)
Query: 536 IGEGGYGSIYKGLLRHM--------QVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLV 586
+G G +G +Y+G + +VA+K L + Q EF +E ++S HPN+V
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62
Query: 587 TLVGAC--PEVWTLVYEYLPNGS----LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
L+G C E ++ E + G L D + P L+ + + I ++ ++L
Sbjct: 63 KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122
Query: 641 HSCKPHSIVHGDLKPANILL-----DANFVSKLSDF------------------------ 671
+ H +H DL N L+ DA+ V K+ DF
Sbjct: 123 E--QMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRW 179
Query: 672 ---EFLASGELTPKSDVYSFGIILLRLLT-GR---PALGITKEVQYALDTGKLKNLLDPL 724
E L G+ T +SDV+SFG+++ +LT G+ PAL + +Q+ G+L+
Sbjct: 180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQK----- 234
Query: 725 AGDWPFVQAEQLANLAMRCCEMSRKSRP 752
P +++ L C RP
Sbjct: 235 ----PENCPDKIYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 5e-11
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 49/260 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQE--ID---ILSKIRHP 583
+F+ KIG+G +G ++K ++R + + L + ++E ID +L+K+
Sbjct: 1 DFEILNKIGKGSFGVVFK-VVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSS 59
Query: 584 NLVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSP---PLSWQTRIRIATELCSVLI 638
++ + + L V EY NG L L + P W+ I+I L
Sbjct: 60 YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA---- 115
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------EFLASGEL 679
LHS K I+H D+K N+ LDA K+ D + S EL
Sbjct: 116 HLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPEL 172
Query: 680 ------TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733
KSDV++ G++L TG+ Q AL ++ + P++ + Q
Sbjct: 173 CEDKPYNEKSDVWALGVVLYECCTGKHPFDA--NNQGALILKIIRGVFPPVSQ--MYSQ- 227
Query: 734 EQLANLAMRCCEMSRKSRPE 753
QLA L +C + RP+
Sbjct: 228 -QLAQLIDQCLTKDYRQRPD 246
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 51/203 (25%)
Query: 536 IGEGGYGSIYKGLLRH-------MQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVT 587
+G G +G +Y+GL R +QVA+K L S Q S+F E I+SK H N+V
Sbjct: 14 LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73
Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSP------PLSWQTRIRIATELCSVLIF 639
L+G E ++ E + G L+ L ++N P L+ + + A V
Sbjct: 74 LIGVSFERLPRFILLELMAGGDLKSFL--RENRPRPERPSSLTMKDLLFCA---RDVAKG 128
Query: 640 LHSCKPHSIVHGDLKPANILLD---ANFVSKLSDF------------------------- 671
+ + +H D+ N LL V+K++DF
Sbjct: 129 CKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWM 188
Query: 672 --EFLASGELTPKSDVYSFGIIL 692
E G T K+DV+SFG++L
Sbjct: 189 PPEAFLDGIFTSKTDVWSFGVLL 211
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 6e-11
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 51/223 (22%)
Query: 536 IGEGGYGSIYKGL------LRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLV 586
+G G +G++YKG+ + VAIK+L+ + GP EF E I++ + HP+LV
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLV 72
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
L+G C P + LV + +P+G L D + KDN + Q + ++ +++L
Sbjct: 73 RLLGVCLSPTI-QLVTQLMPHGCLLDYVHEHKDN---IGSQLLLNWCVQIAKGMMYLEE- 127
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-----------EFLASG--------------- 677
+VH DL N+L+ + K++DF E+ A G
Sbjct: 128 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 185
Query: 678 -ELTPKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 716
+ T +SDV+S+G+ + L+T G+P GI T+E+ L+ G+
Sbjct: 186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE 228
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 7e-11
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 51/211 (24%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
++GEG +G ++ + M VA+K L S +FQ+E ++L+ ++H ++V
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSC-----------KDNSP-PLSWQTRIRIATEL 633
G C E +V+EY+ +G L L +D +P L+ + IA+++
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------- 671
S +++L S VH DL N L+ V K+ DF
Sbjct: 132 ASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 188
Query: 672 -----EFLASGELTPKSDVYSFGIILLRLLT 697
E + + T +SD++SFG++L + T
Sbjct: 189 RWMPPESILYRKFTTESDIWSFGVVLWEIFT 219
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 9e-11
Identities = 62/196 (31%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 535 KIGEGGYGSIYK-GLLRHMQV-AIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
K+G+G YGS+YK L Q A+K + S+ + + EI IL+ + HPN+++
Sbjct: 7 KLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKE 66
Query: 591 ACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
A + L V EY P G L +S K + Q RI +L L LH K
Sbjct: 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--- 123
Query: 648 IVHGDLKPANILLDANFVSKLSDFEF--LASGEL------TP---------------KSD 684
I+H DLK ANILL AN + K+ D + + TP KSD
Sbjct: 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSD 183
Query: 685 VYSFGIILLRLLTGRP 700
++S G +L + T P
Sbjct: 184 IWSLGCLLYEMATFAP 199
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 9e-11
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 39/189 (20%)
Query: 536 IGEGGYGSIYKGLLR-HMQVAIKMLH---PHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
+G+G +G ++KG L+ VA+K P L+ +F E IL + HPN+V L+G
Sbjct: 3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK--IKFLSEARILKQYDHPNIVKLIGV 60
Query: 592 CPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
C + +V E +P G L K + L + ++ A + + + +L S + +
Sbjct: 61 CTQRQPIYIVMELVPGGDFLSFLRKKKDE--LKTKQLVKFALDAAAGMAYLES---KNCI 115
Query: 650 HGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKS 683
H DL N L+ N V K+SDF E L G + +S
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSES 175
Query: 684 DVYSFGIIL 692
DV+S+GI+L
Sbjct: 176 DVWSYGILL 184
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 1e-10
Identities = 61/266 (22%), Positives = 101/266 (37%), Gaps = 61/266 (22%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTL 588
+GEG +GS+ +G L ++VA+K + H+ EF E + HPN++ L
Sbjct: 7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66
Query: 589 VGACPEVWTL--------VYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
+G C E +L + ++ +G L L L QT ++ ++ +
Sbjct: 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------- 671
+L + + +H DL N +L + ++DF
Sbjct: 127 EYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 183
Query: 672 -EFLASGELTPKSDVYSFGI----ILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 726
E LA T KSDV++FG+ I R T P + + Y +LK D L
Sbjct: 184 IESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCL-- 241
Query: 727 DWPFVQAEQLANLAMRCCEMSRKSRP 752
++L +L C K RP
Sbjct: 242 -------DELYDLMYSCWRADPKDRP 260
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 1e-10
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 569 EFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
++EI +++++ HP+++ ++GA E + L E++ GS+ LS
Sbjct: 49 ALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLS---KYGAFKEAVI 105
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF-------------- 671
I +L L +LH + I+H D+K AN+L+D+ +++DF
Sbjct: 106 INYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAG 162
Query: 672 ----------EFLA----SGELTPKS-DVYSFGIILLRLLTGRPALGITKEVQYALDTGK 716
F+A GE +S DV+S G +++ + T +P K + K
Sbjct: 163 EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFK 222
Query: 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 752
+ + P + L ++ +RC E+ + RP
Sbjct: 223 IASATTA--PSIPEHLSPGLRDVTLRCLELQPEDRP 256
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 2e-10
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 37/197 (18%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
K+GEG Y +++KG L VA+K + H P +E+ +L ++H N+VTL +
Sbjct: 12 KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDI 71
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
TLV+EYL + L+ L DN L ++I + +L L C I+
Sbjct: 72 IHTERCLTLVFEYLDS-DLKQYL---DNCGNLMSMHNVKIF--MFQLLRGLSYCHKRKIL 125
Query: 650 HGDLKPANILLDANFVSKLSDFE--------------------------FLASGELTPKS 683
H DLKP N+L++ KL+DF L S E +
Sbjct: 126 HRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPI 185
Query: 684 DVYSFGIILLRLLTGRP 700
D++ G IL + TGRP
Sbjct: 186 DMWGVGCILYEMATGRP 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 48/219 (21%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQG--PSEFQQEIDILSKIRH 582
F+ +IGEG YG +Y+ R VA+K + + + P +EI +L +RH
Sbjct: 8 EFEKLNRIGEGTYGIVYRA--RDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH 65
Query: 583 PNLVTL----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVL 637
PN+V L VG + LV EY +D S DN P P S + +L L
Sbjct: 66 PNIVELKEVVVGKHLDSIFLVMEYCE----QDLASLLDNMPTPFSESQVKCLMLQLLRGL 121
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS------GELTPKS-------- 683
+LH + I+H DLK +N+LL K++DF LA +TPK
Sbjct: 122 QYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFG-LARTYGLPAKPMTPKVVTLWYRAP 177
Query: 684 -------------DVYSFGIILLRLLTGRPALGITKEVQ 709
D+++ G IL LL +P L E++
Sbjct: 178 ELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE 216
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 2e-10
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 49/216 (22%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQGPSEFQQEIDILSKI 580
HN ++GEG +G ++ ++ VA+K L S +F +E ++L+ +
Sbjct: 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 64
Query: 581 RHPNLVTLVGACPE--VWTLVYEYLPNGSLE--------DRLSCKDNSPP--LSWQTRIR 628
+H ++V G C E +V+EY+ +G L D + + + P L+ +
Sbjct: 65 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLH 124
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
IA ++ + +++L S VH DL N L+ N + K+ DF
Sbjct: 125 IAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 181
Query: 672 ----------EFLASGELTPKSDVYSFGIILLRLLT 697
E + + T +SDV+S G++L + T
Sbjct: 182 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 68/236 (28%)
Query: 536 IGEGGYGSIYKGLLR-------HMQVAIKML----HPHSLQGPSEFQQEIDILSKI-RHP 583
+GEG +G + K VA+KML L S+ E++++ I +H
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDL---SDLVSEMEMMKMIGKHK 76
Query: 584 NLVTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPP---------------LSWQT 625
N++ L+G C + ++ +V EY +G+L D L + PP L+ +
Sbjct: 77 NIINLLGVCTQEGPLYVVV-EYAAHGNLRDFL--RARRPPGEYASPDDPRPPEETLTQKD 133
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------- 671
+ A ++ + FL S K +H DL N+L+ + V K++DF
Sbjct: 134 LVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRK 190
Query: 672 -------------EFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 712
E L T +SDV+SFG++L + T G P GI E + L
Sbjct: 191 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 246
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 2e-10
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 35/192 (18%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
++G G +G ++ G R ++VAIK ++ ++ +F +E ++ K+ HP LV L G C
Sbjct: 11 ELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS-EEDFIEEAKVMMKLSHPKLVQLYGVCT 69
Query: 594 EVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+ L V E++ NG L + L + LS + + ++C + +L +S +H
Sbjct: 70 QQKPLYIVTEFMENGCLLNYL--RQRQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHR 124
Query: 652 DLKPANILLDANFVSKLSDF---------EFLAS-----------------GELTPKSDV 685
DL N L+ + V K+SDF E+ +S + + KSDV
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDV 184
Query: 686 YSFGIILLRLLT 697
+SFG+++ + T
Sbjct: 185 WSFGVLMWEVFT 196
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 62/183 (33%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIK---------MLHPHSLQGPSEFQQEIDILSKIR 581
KIGEG YG ++K R+ + VAIK ++ +L+ EI +L +++
Sbjct: 8 KIGEGSYGVVFK--CRNRETGQIVAIKKFVESEDDPVIKKIALR-------EIRMLKQLK 58
Query: 582 HPNLVTLVGACPEVWT------LVYEYL-----------PNGSLEDRLSCKDNSPPLSWQ 624
HPNLV L+ EV+ LV+EY P G K + WQ
Sbjct: 59 HPNLVNLI----EVFRRKRKLHLVFEYCDHTVLNELEKNPRGV--PEHLIKK----IIWQ 108
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSD 684
T L ++ C H+ +H D+KP NIL+ KL DF F + LT D
Sbjct: 109 T-----------LQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGF--ARILTGPGD 155
Query: 685 VYS 687
Y+
Sbjct: 156 DYT 158
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 3e-10
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 43/199 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
+IG+G +G +YKG+ + VAIK++ + E QQEI +LS+ P + G+
Sbjct: 11 RIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGS 70
Query: 592 ---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
++W ++ EYL GS D L PL I E+ L +LHS +
Sbjct: 71 YLKGTKLW-IIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSERK--- 122
Query: 649 VHGDLKPANILLDANFVSKLSDFEFLASGELTP--------------------------- 681
+H D+K AN+LL KL+DF +G+LT
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFG--VAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDF 180
Query: 682 KSDVYSFGIILLRLLTGRP 700
K+D++S GI + L G P
Sbjct: 181 KADIWSLGITAIELAKGEP 199
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 4e-10
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 60/266 (22%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
++G+G +G +Y+G R + +VA+K ++ SL+ EF E ++ ++V
Sbjct: 13 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72
Query: 587 TLVGACP--EVWTLVYEYLPNGSLEDRLSC-------KDNSPPLSWQTRIRIATELCSVL 637
L+G + +V E + +G L+ L PP + Q I++A E+ +
Sbjct: 73 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------- 671
+L++ K VH DL N ++ +F K+ DF
Sbjct: 133 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 189
Query: 672 -EFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLKNLLDPLAG 726
E L G T SD++SFG++L + L +P G++ E +++ +D G L
Sbjct: 190 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL--------- 240
Query: 727 DWPFVQAEQLANLAMRCCEMSRKSRP 752
D P E++ +L C + + K RP
Sbjct: 241 DQPDNCPERVTDLMRMCWQFNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 51/209 (24%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPH---SLQGPSEFQQEIDILSKIR 581
+ + +G G +G ++ L+R A+K++ L+ E +L ++
Sbjct: 2 DLERIKTVGTGTFGRVH--LVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS 59
Query: 582 HPNLVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL 633
HP ++ L WT ++ EY+P G L L NS S T + A+E+
Sbjct: 60 HPFIIRLF------WTEHDQRFLYMLMEYVPGGELFSYLR---NSGRFSNSTGLFYASEI 110
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------EFLAS 676
L +LHS IV+ DLKP NILLD KL+DF E+LA
Sbjct: 111 VCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAP 167
Query: 677 GELTPKS-----DVYSFGIILLRLLTGRP 700
+ K D ++ GI++ +L G P
Sbjct: 168 EVIQSKGHNKAVDWWALGILIYEMLVGYP 196
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 4e-10
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 39/197 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
KIG+G +G ++KG+ Q VAIK++ + E QQEI +LS+ P + G+
Sbjct: 11 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 70
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
++W ++ EYL GS D L PL I E+ L +LHS K
Sbjct: 71 YLKDTKLW-IIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKK--- 122
Query: 649 VHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELTPKS 683
+H D+K AN+LL + KL+DF E + K+
Sbjct: 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 182
Query: 684 DVYSFGIILLRLLTGRP 700
D++S GI + L G P
Sbjct: 183 DIWSLGITAIELAKGEP 199
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 61.3 bits (148), Expect = 5e-10
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 46/200 (23%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
KIG+G G++Y + +VAIK ++ EI ++ + ++PN+V
Sbjct: 26 KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
LVG E+W +V EYL GSL D ++ C D + + E L FLHS
Sbjct: 86 LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALDFLHS--- 133
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEFLAS-------------------------GELT 680
+ ++H D+K NILL + KL+DF F A
Sbjct: 134 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 193
Query: 681 PKSDVYSFGIILLRLLTGRP 700
PK D++S GI+ + ++ G P
Sbjct: 194 PKVDIWSLGIMAIEMVEGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 6e-10
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
K+GEG Y ++YKG L VA+K + H P +E+ +L ++H N+VTL +
Sbjct: 13 KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ TLV+EYL + L+ L NS + + L +L L+ C ++
Sbjct: 73 IHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMH-----NVKLFLFQLLRGLNYCHRRKVL 126
Query: 650 HGDLKPANILLDANFVSKLSDFE--------------------------FLASGELTPKS 683
H DLKP N+L++ KL+DF L S + + +
Sbjct: 127 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQI 186
Query: 684 DVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWP 729
D++ G I + TGRP G T E Q + L P WP
Sbjct: 187 DMWGVGCIFYEMSTGRPLFPGSTVEEQLHF---IFRILGTPTEETWP 230
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 7e-10
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSL-QG-PSEFQQEIDILSKIRHPN 584
++ KIGEG YG+++K R VA+K + +G PS +EI +L +++H N
Sbjct: 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60
Query: 585 LVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+V L V + TLV+EY + SC + P ++ +L L F HS
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKS---FMFQLLKGLAFCHS 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF 671
H+++H DLKP N+L++ N KL+DF
Sbjct: 118 ---HNVLHRDLKPQNLLINKNGELKLADF 143
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 7e-10
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKML--HPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
+I EG YG +Y+ R + VA+K L P +EI+IL K++HPN+VT+
Sbjct: 12 RIEEGTYGVVYRA--RDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTV 69
Query: 589 ----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
VG+ + +V EY+ + L+ + + P + +L S + LH
Sbjct: 70 KEVVVGSNLDKIYMVMEYVEH-DLKSLM--ETMKQPFLQSEVKCLMLQLLSGVAHLHD-- 124
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----EF----------------------LASGE 678
+ I+H DLK +N+LL+ + K+ DF E+ L + E
Sbjct: 125 -NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKE 183
Query: 679 LTPKSDVYSFGIILLRLLTGRP 700
+ D++S G I LLT +P
Sbjct: 184 YSTAIDMWSVGCIFAELLTKKP 205
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 7e-10
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 37/213 (17%)
Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--VGA 591
K+G G +G ++ G + +VA+K L P ++ + F +E +++ ++H LV L V
Sbjct: 13 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 71
Query: 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E ++ EY+ GSL D L D + I + ++ + ++ + +H
Sbjct: 72 KEEPIYIITEYMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 127
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL+ AN+L+ + + K++DF E + G T KSDV
Sbjct: 128 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 187
Query: 686 YSFGIILLRLLT-GR-PALGITK-EVQYALDTG 715
+SFGI+L ++T G+ P G++ +V AL G
Sbjct: 188 WSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG 220
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 62/281 (22%), Positives = 108/281 (38%), Gaps = 68/281 (24%)
Query: 535 KIGEGGYGSIYKG----LLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVT 587
+IG G +G + G + +V +K L + P E F QE+ ++ HPN++
Sbjct: 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQ 59
Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSC 643
+G C E + LV E+ P G L++ L Q + R+A E+ S L++LH
Sbjct: 60 CLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ- 118
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-------------------------------- 671
+H DL N L A+ K+ D+
Sbjct: 119 --ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEI 176
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLTGR----PALGITKEVQYALDTGKLK----NLL 721
+ L + T KS+++S G+ + L T P L + ++ + +K L
Sbjct: 177 RGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLD 236
Query: 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762
+ W V M+ C + ++RP ++V +L
Sbjct: 237 LKYSDRWYEV---------MQFCWLDPETRPTA-EEVHELL 267
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 1e-09
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 46/200 (23%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT----- 587
KIG+G G++Y + +VAI+ ++ EI ++ + ++PN+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 588 LVGACPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
LVG E+W +V EYL GSL D ++ C D + + E L FLHS
Sbjct: 87 LVG--DELW-VVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHS--- 134
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEFLAS--------GELT----------------- 680
+ ++H D+K NILL + KL+DF F A +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 681 PKSDVYSFGIILLRLLTGRP 700
PK D++S GI+ + ++ G P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 45/228 (19%)
Query: 522 EIEGATHNFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
E E + +G+G YG +Y L +++AIK + + +EI + S
Sbjct: 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61
Query: 580 IRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCK-----DNSPPLSWQTRIRIATE 632
++H N+V +G+ E + + E +P GSL L K DN + + T+ +
Sbjct: 62 LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTK-----Q 116
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDF---EFLA---------SGEL 679
+ L +LH + IVH D+K N+L++ + V K+SDF + LA +G L
Sbjct: 117 ILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTL 173
Query: 680 T---------------PKSDVYSFGIILLRLLTGRPALGITKEVQYAL 712
+D++S G ++ + TG+P E Q A+
Sbjct: 174 QYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM 221
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 2e-09
Identities = 66/258 (25%), Positives = 105/258 (40%), Gaps = 52/258 (20%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLH---PHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
+IG G +G ++ G LR + VA+K P L+ ++F QE IL + HPN+V L+
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLI 59
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G C + +V E + G L + P L + I++ + + +L S
Sbjct: 60 GVCTQKQPIYIVMELVQGGDFLTFL--RTEGPRLKVKELIQMVENAAAGMEYLES---KH 114
Query: 648 IVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGELT 680
+H DL N L+ V K+SDF E L G +
Sbjct: 115 CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYS 174
Query: 681 PKSDVYSFGIILLRL--LTGRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
+SDV+SFGI+L L P ++ ++ + A++ G L P + + +
Sbjct: 175 SESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG---VRLPC-----PELCPDAVY 226
Query: 738 NLAMRCCEMSRKSRPELG 755
L RC E RP
Sbjct: 227 RLMERCWEYDPGQRPSFS 244
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 535 KIGEGGYGSIYKGL--LRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
K+GEG Y +++KG L VA+K + H P +E+ +L ++H N+VTL +
Sbjct: 13 KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ TLV+EYL +D D+ + ++I L +L L C ++
Sbjct: 73 VHTDKSLTLVFEYLD----KDLKQYMDDCGNIMSMHNVKIF--LYQILRGLAYCHRRKVL 126
Query: 650 HGDLKPANILLDANFVSKLSDFE--------------------------FLASGELTPKS 683
H DLKP N+L++ KL+DF L S E + +
Sbjct: 127 HRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQI 186
Query: 684 DVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733
D++ G I + +GRP G T E + L + L P WP + +
Sbjct: 187 DMWGVGCIFFEMASGRPLFPGSTVEDELHL---IFRLLGTPTEETWPGISS 234
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLV 589
++GEG GS+ K L++ M A+K + P +Q E++I + P +V
Sbjct: 8 RLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYY 65
Query: 590 GACPEVWT----LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
GA + + + EY GSL+ K + + +IA + L +LHS K
Sbjct: 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASGEL------------------------- 679
I+H D+KP+NILL KL DF SGEL
Sbjct: 126 ---IIHRDIKPSNILLTRKGQVKLCDFG--VSGELVNSLAGTFTGTSFYMAPERIQGKPY 180
Query: 680 TPKSDVYSFGIILLRLLTGR 699
+ SDV+S G+ LL + R
Sbjct: 181 SITSDVWSLGLTLLEVAQNR 200
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLH-PHSLQG-PSEFQQEIDILSKIR---H 582
++P +IG G YG++YK H VA+K + + G P +E+ +L ++ H
Sbjct: 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDH 61
Query: 583 PNLVTLVGACPEVWT-------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
PN+V L+ C T LV+E++ + L L K P L +T + +
Sbjct: 62 PNIVRLMDVCATSRTDRETKVTLVFEHV-DQDLRTYLD-KVPPPGLPAETIKDLMRQFLR 119
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
L FLH+ + IVH DLKP NIL+ + KL+DF
Sbjct: 120 GLDFLHA---NCIVHRDLKPENILVTSGGQVKLADF 152
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 3e-09
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPN 584
+++ K+GEG +G +YK VA+K + H+ + P +EI IL K++HPN
Sbjct: 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPN 68
Query: 585 LVTLVGACPEVWTLVYEYLPNGSLEDRLS--------CKDNSPPLSWQTRIR-------- 628
+V L+ + E P+ S R S D S L ++
Sbjct: 69 VVPLI-------DMAVER-PDKSKRKRGSVYMVTPYMDHDLSGLLE-NPSVKLTESQIKC 119
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
+L + +LH I+H D+K ANIL+D + K++DF
Sbjct: 120 YMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADF 159
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 4e-09
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKIRHP 583
H+++ ++G G YG +YK R++ A+K++ S QQEI ++ + +H
Sbjct: 9 HDYELIQRVGSGTYGDVYKA--RNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHC 66
Query: 584 NLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
N+V G+ E + EY GSL+D + PLS + E L +LH
Sbjct: 67 NIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLH 123
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF 671
S +H D+K ANILL N KL+DF
Sbjct: 124 S---KGKMHRDIKGANILLTDNGDVKLADF 150
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 4e-09
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 48/206 (23%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
+ +KIGEG G + +H QVA+KM+ Q E+ I+ +H N+V
Sbjct: 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVE 82
Query: 588 -----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
LVG E+W L+ E+L G+L D +S QTR+ +IAT SVL
Sbjct: 83 MYKSYLVGE--ELWVLM-EFLQGGALTDIVS----------QTRLNEEQIATVCESVLQA 129
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------------------SGELT 680
L ++H D+K +ILL + KLSDF F A + E+
Sbjct: 130 LCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVI 189
Query: 681 PKS------DVYSFGIILLRLLTGRP 700
++ D++S GI+++ ++ G P
Sbjct: 190 SRTPYGTEVDIWSLGIMVIEMVDGEP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 4e-09
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 572 QEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628
+E+ I+ + R P +V+ GA + + E++ GSL DR+ K P+ + +
Sbjct: 52 RELQIMHECRSPYIVSFYGAFLNENNI-CMCMEFMDCGSL-DRIYKKGG--PIPVEILGK 107
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
IA + L +L++ H I+H D+KP+NIL+++ KL DF
Sbjct: 108 IAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGT 165
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLTGR 699
E + G+ T KSDV+S GI ++ L G+
Sbjct: 166 STYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 52/235 (22%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL--V 589
K+GEG Y ++YKG + VA+K + +G P +E +L ++H N+VTL +
Sbjct: 12 KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDI 71
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS------- 642
+ TLV+EYL D + + +V +FL
Sbjct: 72 IHTKKTLTLVFEYLD----------TDLKQYMDDCGGG---LSMHNVRLFLFQLLRGLAY 118
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFE--------------------------FLAS 676
C ++H DLKP N+L+ KL+DF L S
Sbjct: 119 CHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS 178
Query: 677 GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731
E + D++ G I + TGRP + +V+ L + L P WP V
Sbjct: 179 TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHK-IFRVLGTPTEETWPGV 232
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKML--HPHSLQGPSEFQQEIDILSKIR-HPNLVT 587
KIGEG + + K + + AIK + H SL+ + + EI L ++ HPN++
Sbjct: 6 KIGEGTFSEVLKA--QSRKTGKYYAIKCMKKHFKSLEQVNNLR-EIQALRRLSPHPNILR 62
Query: 588 LVGACPEV--------WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
L+ EV LV+E L + +L + + K PL + +L L
Sbjct: 63 LI----EVLFDRKTGRLALVFE-LMDMNLYELI--KGRKRPLPEKRVKSYMYQLLKSLDH 115
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------EF------------L 674
+H + I H D+KP NIL+ + + KL+DF E+ L
Sbjct: 116 MHR---NGIFHRDIKPENILIKDDIL-KLADFGSCRGIYSKPPYTEYISTRWYRAPECLL 171
Query: 675 ASGELTPKSDVYSFGIILLRLLTGRP 700
G PK D+++ G + +L+ P
Sbjct: 172 TDGYYGPKMDIWAVGCVFFEILSLFP 197
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 5e-09
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 45/200 (22%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
+IG+G +G ++KG+ Q VAIK++ + E QQEI +LS+ P + G+
Sbjct: 11 RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 70
Query: 592 C---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSCKP 645
++W ++ EYL GS D L + P +IAT E+ L +LHS K
Sbjct: 71 YLKGTKLW-IIMEYLGGGSALDLL----RAGPFD---EFQIATMLKEILKGLDYLHSEKK 122
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELT 680
+H D+K AN+LL KL+DF E +
Sbjct: 123 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 179
Query: 681 PKSDVYSFGIILLRLLTGRP 700
K+D++S GI + L G P
Sbjct: 180 SKADIWSLGITAIELAKGEP 199
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 6e-09
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 40/161 (24%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKM-LHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
KIG+G +G ++K RH + VA+K L + +G P +EI IL ++H N+V L
Sbjct: 19 KIGQGTFGEVFKA--RHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 76
Query: 589 VGACPEVWT----------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--------RIA 630
+ C T LV+E+ C+ + L + ++
Sbjct: 77 IEICRTKATPYNRYKGSFYLVFEF-----------CEHDLAGLLSNKNVKFTLSEIKKVM 125
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
L + L ++H K I+H D+K ANIL+ + + KL+DF
Sbjct: 126 KMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADF 163
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 6e-09
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 50/257 (19%)
Query: 536 IGEGGYGSIYK----GLLRH---MQVAIKMLHPHSLQGPSE-FQQEIDILSKI-RHPNLV 586
+G G +G + + GL + M+VA+KML P + E E+ I+S + H N+V
Sbjct: 43 LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIV 102
Query: 587 TLVGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
L+GAC P + ++ EY G L + L K S L+ + + + ++ + FL S
Sbjct: 103 NLLGACTIGGPIL--VITEYCCYGDLLNFLRRKRESF-LTLEDLLSFSYQVAKGMAFLAS 159
Query: 643 CKPHSIVHGDLKPANILL-------------------DANFVSKLSDF--------EFLA 675
+ +H DL N+LL D+N+V K + E +
Sbjct: 160 ---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 216
Query: 676 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
+ T +SDV+S+GI+L + + LG +D+ K + + P +
Sbjct: 217 NCVYTFESDVWSYGILLWEIFS----LGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAE 272
Query: 736 LANLAMRCCEMSRKSRP 752
+ ++ C + RP
Sbjct: 273 IYDIMKTCWDADPLKRP 289
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 7e-09
Identities = 66/259 (25%), Positives = 104/259 (40%), Gaps = 39/259 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHP 583
NF KIG G + +Y+ LL + VA+K + L +EID+L ++ HP
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFL 640
N++ + E +V E G L + K + +T + +LCS L +
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLASGEL-------TP--------- 681
HS ++H D+KPAN+ + A V KL D F +S TP
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179
Query: 682 ------KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
KSD++S G +L + + K Y+L + PL D +E+
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH---YSEE 236
Query: 736 LANLAMRCCEMSRKSRPEL 754
L L C + RP++
Sbjct: 237 LRQLVNMCINPDPEKRPDI 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 40/203 (19%)
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKML-HPH--SLQGPSEFQQEIDILSKIRHPNLVT 587
S+ I E SIYKG+ + +V I+ H + EI L +I N++
Sbjct: 23 YTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILK 82
Query: 588 LVG-------ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
+ G P + +L+ EY G L + L D LS++T++ +A + C L L
Sbjct: 83 IYGFIIDIVDDLPRL-SLILEYCTRGYLREVL---DKEKDLSFKTKLDMAIDCCKGLYNL 138
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKL--------------SDFEFLAS---------- 676
+ K + + +L + L+ N+ K+ + F+
Sbjct: 139 Y--KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIF 196
Query: 677 GELTPKSDVYSFGIILLRLLTGR 699
E T K D+YS G++L + TG+
Sbjct: 197 SEYTIKDDIYSLGVVLWEIFTGK 219
|
Length = 283 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 7e-09
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 48/203 (23%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQ--EIDILSKI-RHPNLVTLV 589
++G+G +GS+Y + VAIK + E E+ L K+ HPN+V L
Sbjct: 6 QLGDGTFGSVYLARNKETGELVAIKKMK-KKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64
Query: 590 GACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHS 642
EV+ V+EY+ G+L L P S ++ IR I ++ L +H
Sbjct: 65 ----EVFRENDELYFVFEYM-EGNLYQ-LMKDRKGKPFS-ESVIRSIIYQILQGLAHIHK 117
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF------------------------E-FLASG 677
H H DLKP N+L+ V K++DF E L S
Sbjct: 118 ---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRST 174
Query: 678 ELTPKSDVYSFGIILLRLLTGRP 700
+ D+++ G I+ L T RP
Sbjct: 175 SYSSPVDIWALGCIMAELYTLRP 197
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 19/138 (13%)
Query: 536 IGEGGYGSIYKGLLRH------------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP 583
+G+G + +IYKG+LR + V +K+L + F + ++S++ H
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS-DHRDSLAFFETASLMSQLSHK 61
Query: 584 NLVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+LV L G C + +V EY+ G L+ L + N+ L W ++ +A +L S L +L
Sbjct: 62 HLVKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLED 119
Query: 643 CKPHSIVHGDLKPANILL 660
K +VHG++ NIL+
Sbjct: 120 KK---LVHGNVCGKNILV 134
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 1e-08
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKIRHPN 584
+F+ +IG G YG +YK R++ AIK++ + + QQEI ++ +H N
Sbjct: 10 DFELIQRIGSGTYGDVYKA--RNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN 67
Query: 585 LVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
+V G+ ++W + E+ GSL+D + PLS ++ E L +LH
Sbjct: 68 IVAYFGSYLRRDKLW-ICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLH 123
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF 671
S +H D+K ANILL N KL+DF
Sbjct: 124 S---KGKMHRDIKGANILLTDNGHVKLADF 150
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 1e-08
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 46/206 (22%)
Query: 529 NFDPSLKIGEGGYGSIY--KGLLRHMQVAIKM--LHPHSLQGPSEFQQEIDILSKIRHPN 584
++ KIGEG +G IY K IK L ++ ++E+ +L+K++HPN
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCK-----DNSPPLSWQTRIRIATELCSVL 637
+VT + E L V EY G L R++ + LSW +I + L
Sbjct: 61 IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG------L 114
Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF----------EFLASGELTP----- 681
+H K I+H D+K NI L N V+KL DF E + TP
Sbjct: 115 KHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSP 171
Query: 682 ----------KSDVYSFGIILLRLLT 697
K+D++S G +L L T
Sbjct: 172 EICQNRPYNNKTDIWSLGCVLYELCT 197
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 1e-08
Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 19/165 (11%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIES--------IRRAKASESLYAEELK-- 409
+L + + E E E ++ G+ E+ ++ I + S + EL+
Sbjct: 261 SELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320
Query: 410 --RRKEFEEALANGKLE-------LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460
R + E + E +E +K+ D++ EE ++ L +++ E D+
Sbjct: 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
Query: 461 KELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
E ++ E L+ K+E +EL+ E D+ +E + L + +
Sbjct: 381 AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADL 425
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 71/260 (27%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQ-GPSEFQQ-------------EIDILSK 579
+GEG YG + K L VAIK + + ++ +Q E+ I+++
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 580 IRHPNLVTLVGA-CPEVW-TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
I+H N++ LV + LV + + L+ + D L+ I ++ + L
Sbjct: 77 IKHENIMGLVDVYVEGDFINLVMDIM-ASDLKKVV---DRKIRLTESQVKCILLQILNGL 132
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------EFLASGE- 678
LH +H DL PANI +++ + K++DF E + E
Sbjct: 133 NVLHKW---YFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREE 189
Query: 679 LTPK---------------------SDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL 717
+T K D++S G I LLTG+P E+ G++
Sbjct: 190 MTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---QLGRI 246
Query: 718 KNLL-DPLAGDWPFVQAEQL 736
LL P +WP QA++L
Sbjct: 247 FELLGTPNEDNWP--QAKKL 264
|
Length = 335 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRHPN 584
IG G +GS+Y G+ +A+K + S+ S+ +EI +L +++H N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+V +G+ + + EY+P GS+ L+ + +R ++ L +LH+
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVR---QILKGLNYLHN 124
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF------------------------------- 671
I+H D+K ANIL+D K+SDF
Sbjct: 125 ---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP 181
Query: 672 EFLASGELTPKSDVYSFGIILLRLLTGR 699
E + T K+D++S G +++ +LTG+
Sbjct: 182 EVVKQTSYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 2e-08
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 535 KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
++G+G +G +YK + V A K++ S + ++ EIDIL+ HPN+V L+ A
Sbjct: 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+W L+ E+ G++ D + + P Q R+ + + L +LH K I+
Sbjct: 72 YYENNLWILI-EFCAGGAV-DAVMLELERPLTEPQIRV-VCKQTLEALNYLHENK---II 125
Query: 650 HGDLKPANILLDANFVSKLSDF 671
H DLK NIL + KL+DF
Sbjct: 126 HRDLKAGNILFTLDGDIKLADF 147
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 55/276 (19%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQG--PSEFQQEIDILSKI 580
++ +IGEG YG ++K R ++ VA+K + + + P +E+ +L +
Sbjct: 1 QQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 58
Query: 581 R---HPNLVTLVGACP-------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
HPN+V L C TLV+E++ + L L K P + +T +
Sbjct: 59 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD-KVPEPGVPTETIKDMM 116
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------- 671
+L L FLHS H +VH DLKP NIL+ ++ KL+DF
Sbjct: 117 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 173
Query: 672 -----EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLA 725
E L D++S G I + +P + +V GK+ +++ P
Sbjct: 174 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGE 230
Query: 726 GDWPFVQAEQLANLAMRCCEMSRKSRP---ELGKDV 758
DWP A + + K ELGKD+
Sbjct: 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 266
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 53/206 (25%)
Query: 538 EGGYGSIYKGLLRHM------QVAIKMLHPHSLQGPSEFQ-----QEIDILSKIRHPNLV 586
EG +G I+ G+L +V +K + H+ SE Q QE +L + H N++
Sbjct: 16 EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA----SEIQVTLLLQESCLLYGLSHQNIL 71
Query: 587 TLVGACPEVWT---LVYEYLPNGSLED-----RLSCKDNSPPLSWQTRIRIATELCSVLI 638
++ C E ++Y Y+ G+L+ RL +N LS Q + +A ++ +
Sbjct: 72 PILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSD---------------------------F 671
+LH ++H D+ N ++D K++D
Sbjct: 132 YLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL 188
Query: 672 EFLASGELTPKSDVYSFGIILLRLLT 697
E L + E + SDV+SFG++L L+T
Sbjct: 189 ESLVNKEYSSASDVWSFGVLLWELMT 214
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 3e-08
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
+L +A E E EE +A ++ + + A EELKR E E
Sbjct: 354 AELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEE-- 411
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
LER+ ++ +++ EEL+ + L++++ E ++ +ELE+++ + L+ ++
Sbjct: 412 ----RLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRLKELER 467
Query: 480 EQDELQMERDKAVKEAEELRK 500
E ELQ E + KE L
Sbjct: 468 ELAELQEELQRLEKELSSLEA 488
|
Length = 1163 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 3e-08
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 56/213 (26%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVG 590
+G G YG +YKG RH++ AIK++ + E + EI++L K H N+ T G
Sbjct: 24 VGNGTYGQVYKG--RHVKTGQLAAIKVMDV-TEDEEEEIKLEINMLKKYSHHRNIATYYG 80
Query: 591 A----CP-----EVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFL 640
A P ++W LV E+ GS+ D + + K N+ W I E+ L L
Sbjct: 81 AFIKKSPPGHDDQLW-LVMEFCGAGSVTDLVKNTKGNALKEDWIAYI--CREILRGLAHL 137
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLA 675
H+ H ++H D+K N+LL N KL DF E +A
Sbjct: 138 HA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 194
Query: 676 SGELTP------KSDVYSFGIILLRLLTGRPAL 702
E P +SD++S GI + + G P L
Sbjct: 195 CDE-NPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 536 IGEGGYGSIYKGLLRH----MQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLV 589
+GEG +GS+ +G L ++VA+K + + +F E + + HPN++ L+
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 590 GACPEVW--------TLVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVLI 638
G C + ++ ++ +G L L D L Q ++ T++ S +
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------------- 671
+L S S +H DL N +L+ N ++DF
Sbjct: 127 YLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 672 EFLASGELTPKSDVYSFGI----ILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727
E LA T KSDV+SFG+ I R T P + ++ Y +LK D L G
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDG- 242
Query: 728 WPFVQAEQLANLAMRCCEMSRKSRP 752
L +L C ++ K RP
Sbjct: 243 --------LYSLMSSCWLLNPKDRP 259
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 63/262 (24%)
Query: 535 KIGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTL 588
KIGEG +G L++ Q IK ++ + E ++E+ +LS ++HPN+V
Sbjct: 7 KIGEGSFGKAI--LVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQY 64
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLSCKDNSP-----PLSWQTRIRIATELCSVLIFLH 641
+ E L V +Y G L +++ + L W ++C L +H
Sbjct: 65 QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDW------FVQICLALKHVH 118
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----ASGEL------TP---------- 681
K I+H D+K NI L + KL DF ++ EL TP
Sbjct: 119 DRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICEN 175
Query: 682 -----KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL-LDPLAGDWPFVQAE- 734
KSD+++ G +L + T +++A + G +KNL L + G +P V +
Sbjct: 176 RPYNNKSDIWALGCVLYEMCT----------LKHAFEAGNMKNLVLKIIRGSYPPVSSHY 225
Query: 735 --QLANLAMRCCEMSRKSRPEL 754
L NL + + + + RP +
Sbjct: 226 SYDLRNLVSQLFKRNPRDRPSV 247
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 536 IGEGGYGSIYKGLL------RHMQVAIKMLHPHSLQGPSEFQQEID---ILSKIRHPNLV 586
+G G +G+++KG+ + VAIK + S G FQ+ D + + H +V
Sbjct: 15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIV 72
Query: 587 TLVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+G CP LV + P GSL D + + + L Q + ++ + +L
Sbjct: 73 RLLGICPGASLQLVTQLSPLGSLLDHV--RQHRDSLDPQRLLNWCVQIAKGMYYLEE--- 127
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGE 678
H +VH +L NILL ++ + +++DF E + G
Sbjct: 128 HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGR 187
Query: 679 LTPKSDVYSFGIILLRLLT 697
T +SDV+S+G+ + +++
Sbjct: 188 YTHQSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 6e-08
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 56/213 (26%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVG 590
+G G YG +YKG RH++ AIK++ + E +QEI++L K H N+ T G
Sbjct: 14 VGNGTYGQVYKG--RHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYG 70
Query: 591 AC---------PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFL 640
A ++W LV E+ GS+ D + + K N+ W I E+ L L
Sbjct: 71 AFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI--CREILRGLSHL 127
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLA 675
H H ++H D+K N+LL N KL DF E +A
Sbjct: 128 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 184
Query: 676 SGELTP------KSDVYSFGIILLRLLTGRPAL 702
E P KSD++S GI + + G P L
Sbjct: 185 CDE-NPDATYDFKSDLWSLGITAIEMAEGAPPL 216
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 6e-08
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
KIG+G G+++ + +VAIK ++ EI ++ ++++PN+V + +
Sbjct: 26 KIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF 85
Query: 592 -CPEVWTLVYEYLPNGSLEDRLS--CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ +V EYL GSL D ++ C D + + + E L FLH+ + +
Sbjct: 86 LVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAA------VCRECLQALEFLHA---NQV 136
Query: 649 VHGDLKPANILLDANFVSKLSDFEFLAS-------------------------GELTPKS 683
+H D+K N+LL + KL+DF F A PK
Sbjct: 137 IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 196
Query: 684 DVYSFGIILLRLLTGRP 700
D++S GI+ + ++ G P
Sbjct: 197 DIWSLGIMAIEMVEGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 6e-08
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 535 KIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
++G+G +G +YK + A K++ S + ++ EI+IL+ HP +V L+GA
Sbjct: 19 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCSVLIFLHSCKPHSI 648
++W ++ E+ P G+++ + D + +I+ I ++ L +LHS K I
Sbjct: 79 YWDGKLWIMI-EFCPGGAVDAIMLELDRGLT---EPQIQVICRQMLEALQYLHSMK---I 131
Query: 649 VHGDLKPANILLDANFVSKLSDF 671
+H DLK N+LL + KL+DF
Sbjct: 132 IHRDLKAGNVLLTLDGDIKLADF 154
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 7e-08
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 48/206 (23%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
D +KIGEG G + +H QVA+K + Q E+ I+ H N+V
Sbjct: 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD 83
Query: 588 -----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
LVG E+W +V E+L G+L D ++ TR+ +IAT SVL
Sbjct: 84 MYNSYLVG--DELW-VVMEFLEGGALTDIVT----------HTRMNEEQIATVCLSVLRA 130
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--SGEL--------TP-------- 681
L ++H D+K +ILL ++ KLSDF F A S E+ TP
Sbjct: 131 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVI 190
Query: 682 -------KSDVYSFGIILLRLLTGRP 700
+ D++S GI+++ ++ G P
Sbjct: 191 SRLPYGTEVDIWSLGIMVIEMIDGEP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 8e-08
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 356 DNLYDQLAQAMAEAE--NSRREAFEEALRRGKAEKD-----------AIESIRRAKAS-E 401
+ L +LA E E SR E EE L + E + +ES+ A A +
Sbjct: 719 EELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALAKLK 778
Query: 402 SLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAK 461
E ++R+ +E L + ELE +++ D + EL+ ++ LE +I E ++ +
Sbjct: 779 EEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIE 838
Query: 462 ELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
ELE+K+ E L+ +KE +EL+ E ++ E EEL KE
Sbjct: 839 ELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKEL 882
|
Length = 1163 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 8e-08
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 66/220 (30%)
Query: 535 KIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVT 587
IG G YG +YK ++ + AIK Q Q +EI +L +++H N+V+
Sbjct: 7 CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS 66
Query: 588 LVGACPE-----VWTLVYEYLPNGSLE----DRLSCKDNSPP-----LSWQTRIRIATEL 633
LV E V+ L+++Y + + R + + + PP L WQ +
Sbjct: 67 LVEVFLEHADKSVY-LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ--------I 117
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFEF----------LASG-- 677
+ + +LHS + ++H DLKPANIL+ V K+ D LA
Sbjct: 118 LNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDP 174
Query: 678 ----------EL-------TPKSDVYSFGIILLRLLTGRP 700
EL T D+++ G I LLT P
Sbjct: 175 VVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEP 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 35/194 (18%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ----QEIDILSKIRHPNLVTLV 589
I +G +GS+Y K AIK+L + ++ + ++ + P + L
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63
Query: 590 GA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+ + LV EYL G S L + E+ + LH
Sbjct: 64 YSFQSKDYLYLVMEYLNGGDCA---SLIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RG 117
Query: 648 IVHGDLKPANILLDANFVSKLSDFEFLASGELTPK---------------------SDVY 686
I+H D+KP N+L+D KL+DF +G K SD +
Sbjct: 118 IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWW 177
Query: 687 SFGIILLRLLTGRP 700
S G ++ L G P
Sbjct: 178 SLGCVIFEFLFGYP 191
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 39/193 (20%)
Query: 534 LKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
+++G G +G + KG+ + + VAIK+L + + E +E +I+ ++ +P +V +
Sbjct: 1 VELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRM 60
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C E LV E G L LS K + +S + + V + + + +
Sbjct: 61 IGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVS-----NVVELMHQVSMGMKYLEGKN 115
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGEL 679
VH DL N+LL +K+SDF E + +
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKF 175
Query: 680 TPKSDVYSFGIIL 692
+ +SDV+S+GI +
Sbjct: 176 SSRSDVWSYGITM 188
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 529 NFDPSLKIGEGGYGS--IYKGLLRHMQVAIKMLHPHSLQGPSEF--QQEIDILSKIRHPN 584
++ P +G+G +G +Y+ V K ++ L EI ILS ++HPN
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60
Query: 585 LVTLVGACPEVWTLV--YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
++ + TL+ EY G+L D++ + + + ++ S + ++H
Sbjct: 61 IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQL-FEEEMVLWYLFQIVSAVSYIHK 119
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF--------EFLASGEL--TP----------- 681
I+H D+K NI L + KL DF E+ + + TP
Sbjct: 120 ---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGV 176
Query: 682 ----KSDVYSFGIILLRLLT 697
KSD+++ G +L LLT
Sbjct: 177 KYNFKSDIWALGCVLYELLT 196
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 1e-07
Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 49/262 (18%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL-- 588
K+GEG Y ++YKG+ R + VA+K++ + +G P +E +L ++H N+V L
Sbjct: 12 KLGEGSYATVYKGISRINGQL-VALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHD 70
Query: 589 VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLIFLHSCKPHS 647
+ E T V+EY+ D P +R+ +L L ++H
Sbjct: 71 IIHTKETLTFVFEYMHT----DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QH 123
Query: 648 IVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTP 681
I+H DLKP N+L+ KL+DF L + + +
Sbjct: 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSS 183
Query: 682 KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDWPFVQAEQLANLA 740
D++ G I + +L G+PA +V L+ K+ +L P WP ++ L
Sbjct: 184 ALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLE--KIWTVLGVPTEDTWP-----GVSKLP 236
Query: 741 MRCCEMSRKSRPELGKDVWRVL 762
E +P+ + VW+ L
Sbjct: 237 NYKPEWFLPCKPQQLRVVWKRL 258
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 61/217 (28%)
Query: 535 KIGEGGYGSIYKGLL-------RHMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNL 585
++GE +G +YKG L + VAIK L + +GP EF+ E + S+++HPN+
Sbjct: 12 ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNI 70
Query: 586 VTLVGACP--EVWTLVYEYLPN----------------GSLEDRLSCKDNSPPLSWQTRI 627
V L+G + ++++ Y + GS +D + K P + +
Sbjct: 71 VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADF---V 127
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------- 671
I T++ + + FL S H +VH DL N+L+ K+SD
Sbjct: 128 HIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMG 184
Query: 672 -----------EFLASGELTPKSDVYSFGIILLRLLT 697
E + G+ + SD++S+G++L + +
Sbjct: 185 NSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 529 NFDPSLKIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHP 583
NF KIG G + +Y+ LL VA+K + + Q +EID+L ++ HP
Sbjct: 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62
Query: 584 NLVTLVGACPE--VWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFL 640
N++ + + E +V E G L + K + +T + +LCS + +
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
HS ++H D+KPAN+ + A V KL D
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDL 150
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 42/202 (20%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGA 591
++G+G YGS+YK L R V + M S+F Q E+DIL K P +V GA
Sbjct: 8 ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGA 67
Query: 592 CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ VY EY+ GSL+ + + + RI + L FL + H+I
Sbjct: 68 F-FIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK--EEHNI 124
Query: 649 VHGDLKPANILLDANFVSKLSDFEFLASGEL----------------------------- 679
+H D+KP N+L++ N KL DF SG L
Sbjct: 125 IHRDVKPTNVLVNGNGQVKLCDFG--VSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNP 182
Query: 680 --TPKSDVYSFGIILLRLLTGR 699
T +SDV+S G+ +L + GR
Sbjct: 183 TYTVQSDVWSLGLSILEMALGR 204
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 60/268 (22%)
Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLV 586
++G+G +G +Y+G+ + +VAIK ++ S++ EF E ++ + ++V
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 587 TLVGACPEVW-TLV-YEYLPNGSLEDRL----SCKDNSP---PLSWQTRIRIATELCSVL 637
L+G + TLV E + G L+ L +N+P P S + I++A E+ +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------- 671
+L++ K VH DL N ++ +F K+ DF
Sbjct: 133 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 189
Query: 672 -EFLASGELTPKSDVYSFGIILLRL--LTGRPALGITKE--VQYALDTGKLKNLLDPLAG 726
E L G T SDV+SFG++L + L +P G++ E +++ ++ G L
Sbjct: 190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL--------- 240
Query: 727 DWPFVQAEQLANLAMRCCEMSRKSRPEL 754
D P + L L C + + K RP
Sbjct: 241 DKPDNCPDMLFELMRMCWQYNPKMRPSF 268
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 48/206 (23%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
D +KIGEG G + ++ VA+K + Q E+ I+ +H N+V
Sbjct: 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 588 -----LVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI---RIATELCSVLIF 639
LVG E+W +V E+L G+L D ++ TR+ +IA +VL
Sbjct: 82 MYNSYLVG--DELW-VVMEFLEGGALTDIVT----------HTRMNEEQIAAVCLAVLKA 128
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------------------SGELT 680
L ++H D+K +ILL + KLSDF F A + EL
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELI 188
Query: 681 ------PKSDVYSFGIILLRLLTGRP 700
P+ D++S GI+++ ++ G P
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 57/199 (28%), Positives = 80/199 (40%), Gaps = 37/199 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
+IG G +G++Y VAIK + Q ++Q +E+ L ++RHPN +
Sbjct: 22 EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK 81
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G T LV EY GS D L + PL I L +LHS H
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHS---HE 135
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------EFLAS--------------GELTPKS 683
+H D+K NILL KL+DF F+ + G+ K
Sbjct: 136 RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 684 DVYSFGIILLRLLTGRPAL 702
DV+S GI + L +P L
Sbjct: 196 DVWSLGITCIELAERKPPL 214
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 34/155 (21%)
Query: 572 QEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI 629
E IL ++ HP LV L + E LV + L G L LS K S + +++
Sbjct: 49 NERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV---KFS-EEQVKF 104
Query: 630 -ATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---------NFVSKLSDFEFLASGEL 679
E+ L +LHS I+H D+KP NILLD N +K++ S
Sbjct: 105 WICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSG 161
Query: 680 TP---------------KSDVYSFGIILLRLLTGR 699
TP D +S G+ L G+
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 3e-07
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 535 KIGEGGYGSIYKGL----LRHMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLV 589
+IG G +G + G QV +K L S+Q +F +E ++H NL+ +
Sbjct: 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61
Query: 590 GACPEV--WTLVYEYLPNGSLEDRL-SCK--DNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G C EV + LV E+ P G L+ L SC+ + P T R+A E+ L+ LH
Sbjct: 62 GQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTP-DPTTLQRMACEIALGLLHLHK-- 118
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF 671
++ +H DL N LL A+ K+ D+
Sbjct: 119 -NNFIHSDLALRNCLLTADLTVKIGDY 144
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 37/199 (18%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
+IG G +G++Y + + VAIK + Q ++Q +E+ L K+RHPN +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G T LV EY GS D L + PL + L +LHS H+
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HN 135
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------EFLAS--------------GELTPKS 683
++H D+K NILL + KL DF F+ + G+ K
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 684 DVYSFGIILLRLLTGRPAL 702
DV+S GI + L +P L
Sbjct: 196 DVWSLGITCIELAERKPPL 214
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 4e-07
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 75/226 (33%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP--HSLQGPSEFQQ----EIDILSK 579
+ IGEG YG + + ++VAIK + P H F Q EI IL +
Sbjct: 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-----FCQRTLREIKILRR 59
Query: 580 IRHPNLVTL--------VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLS--------W 623
+H N++ + + +V+ +V E + L + + LS +
Sbjct: 60 FKHENIIGILDIIRPPSFESFNDVY-IVQELMET-DLYKLIK----TQHLSNDHIQYFLY 113
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------ 671
Q +R L ++HS +++H DLKP+N+LL+ N K+ DF
Sbjct: 114 QI-LR-------GLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162
Query: 672 -----EFLA------------SGELTPKSDVYSFGIILLRLLTGRP 700
E++A S T D++S G IL +L+ RP
Sbjct: 163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRP 208
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 4e-07
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 570 FQQEIDILSKIRH-----PNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQ 624
++E+ IL + P ++ + + L+ E++ +L+ +S +
Sbjct: 38 REREVAILQLLARKGLPVPKVLASGESDGWSY-LLMEWIEGETLD----------EVSEE 86
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASG 677
+ IA +L +L LH + HGDL P NIL+D + + D+E+ G
Sbjct: 87 EKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 5e-07
Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 65/214 (30%)
Query: 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQ---------QEIDILSKIRHPN 584
IG G YG + + +VAIK + F +EI +L +RH N
Sbjct: 8 IGSGAYGVVCSAVDKRTGRKVAIKKISN-------VFDDLIDAKRILREIKLLRHLRHEN 60
Query: 585 LVTLVGACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR-IATELCS 635
++ L+ +V+ +V E + L + PL+ I+ ++
Sbjct: 61 IIGLLDILRPPSPEDFNDVY-IVTELMET-DLHKVIKSPQ---PLTDD-HIQYFLYQILR 114
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------EFLASGELTP------ 681
L +LHS ++H DLKP+NIL+++N K+ DF + G LT
Sbjct: 115 GLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW 171
Query: 682 --------------KS-DVYSFGIILLRLLTGRP 700
K+ D++S G I LLT +P
Sbjct: 172 YRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKP 205
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 7e-07
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 40/241 (16%)
Query: 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQG-PSEFQQEIDILSKIR 581
G +++ K+GEG Y ++YKG + VA+K++ +G P +E +L ++
Sbjct: 2 GKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK 61
Query: 582 HPNLVTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT-ELCSVLI 638
H N+V L + E TLV+EY+ D D P +++ +L L
Sbjct: 62 HANIVLLHDIIHTKETLTLVFEYVHT----DLCQYMDKHPGGLHPENVKLFLFQLLRGLS 117
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE-------------------------- 672
++H I+H DLKP N+L+ KL+DF
Sbjct: 118 YIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDV 174
Query: 673 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732
L S E + D++ G I + ++ G A K++Q L+ L L P WP V
Sbjct: 175 LLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV-LGTPNEDTWPGVH 233
Query: 733 A 733
+
Sbjct: 234 S 234
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 7e-07
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 45/204 (22%)
Query: 536 IGEGGYGSIYKGL-------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
+G+G +G +Y L QV P + + S + EI +L ++H +V
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69
Query: 589 VGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G + T+ EY+P GS++D+L L+ + ++ + +LHS
Sbjct: 70 YGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHS-- 124
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+ IVH D+K ANIL D+ KL DF E ++
Sbjct: 125 -NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG 183
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
K+DV+S G ++ +LT +P
Sbjct: 184 EGYGRKADVWSLGCTVVEMLTEKP 207
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 8e-07
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIE-SIRRAK----ASESLYAEELKRRKEFEEA 417
+ E EE + + E + +E + A+ A E +RR+ E+
Sbjct: 770 LEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQE 829
Query: 418 LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477
+ + E+E ++++ DE+ EEL+ + L+ ++ E + +ELE ++ E +
Sbjct: 830 IEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEEL 889
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEA 505
++E EL+ E + +E E+LR+ +E
Sbjct: 890 EEELRELESELAELKEEIEKLRERLEEL 917
|
Length = 1163 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 8e-07
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ----EIDILSKIRHPNLVT 587
+GEG YG + K RH + VAIK + E ++ E+ +L ++ N+V
Sbjct: 9 VGEGAYGVVLK--CRHKETKEIVAIKKFKDS--EENEEVKETTLRELKMLRTLKQENIVE 64
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L A LV+EY+ LE + PP ++ + + ++ +H C
Sbjct: 65 LKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP------EKVRSYIYQLIKAIHWCHK 118
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEF 673
+ IVH D+KP N+L+ N V KL DF F
Sbjct: 119 NDIVHRDIKPENLLISHNDVLKLCDFGF 146
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 8e-07
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 37/199 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
+IG G +G++Y H VA+K + Q ++Q +E+ L +++HPN +
Sbjct: 28 EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G + T LV EY GS D L + PL I L +LHS H+
Sbjct: 88 GCYLKEHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HN 141
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------EFLAS--------------GELTPKS 683
++H D+K NILL KL+DF F+ + G+ K
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKV 201
Query: 684 DVYSFGIILLRLLTGRPAL 702
DV+S GI + L +P L
Sbjct: 202 DVWSLGITCIELAERKPPL 220
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 9e-07
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 34/182 (18%)
Query: 501 SRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV----AI 556
S +SSS+ + S SE+E +IG G G++YK + H A+
Sbjct: 54 SSSSSSSSASGSAPSAAKSLSELERVN-------RIGSGAGGTVYK--VIHRPTGRLYAL 104
Query: 557 KMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVW------TLVYEYLPNGSLE 609
K+++ H + +EI+IL + HPN+V C +++ ++ E++ GSLE
Sbjct: 105 KVIYGNHEDTVRRQICREIEILRDVNHPNVVK----CHDMFDHNGEIQVLLEFMDGGSLE 160
Query: 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
+ L+ +A ++ S + +LH IVH D+KP+N+L+++ K++
Sbjct: 161 GTHIADE--QFLA-----DVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIA 210
Query: 670 DF 671
DF
Sbjct: 211 DF 212
|
Length = 353 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 9e-07
Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 61/269 (22%)
Query: 536 IGEGGYGSIYKGLLRH-----MQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTL 588
+G+G +GS+ + L+ +VA+KML S EF +E + + HPN++ L
Sbjct: 7 LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66
Query: 589 VGACPE--------VWTLVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
+G + ++ ++ +G L L + L QT +R ++ S +
Sbjct: 67 IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------- 671
+L S + +H DL N +L+ N ++DF
Sbjct: 127 EYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLA 183
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLT--GRPALGI-TKEV-QYALDTGKLKNLLDPLAG 726
E LA T SDV++FG+ + ++T P G+ E+ Y + +LK D L
Sbjct: 184 LESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCL-- 241
Query: 727 DWPFVQAEQLANLAMRCCEMSRKSRPELG 755
E + L +C K RP
Sbjct: 242 -------EDVYELMCQCWSPEPKCRPSFQ 263
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 1e-06
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
++L + + E E E + K E + +E R+A E EE E E L
Sbjct: 754 EELQERLEELEEELESLEEALAKL-KEEIEELEEKRQALQEELEELEEELE--EAERRLD 810
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+ ELE ++++ + + +E++ ++ LE ++ E ++ +ELE+++ E L+ +
Sbjct: 811 ALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEA 870
Query: 480 EQDEL-------QMERDKAVKEAEELRKSRKEASS 507
E++EL + E+++ +E EL E
Sbjct: 871 EKEELEDELKELEEEKEELEEELRELESELAELKE 905
|
Length = 1163 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 1e-06
Identities = 33/148 (22%), Positives = 68/148 (45%)
Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEA 417
L ++L E + E + + E+ E R A E + R +E EE
Sbjct: 686 LEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEE 745
Query: 418 LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477
L + ELE ++++ +E+ EEL+ + + L+ +I E ++ + L++++ E L+
Sbjct: 746 LEELEEELEELQERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEA 805
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEA 505
++ D L+ E + + E L + +E
Sbjct: 806 ERRLDALERELESLEQRRERLEQEIEEL 833
|
Length = 1163 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 536 IGEGGYGSIYKGL---------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
+G+G + I+KG+ L +V +K+L F + ++S++ H +LV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G C + +V EY+ GSL+ L N +SW ++ +A +L L FL
Sbjct: 63 LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFLED-- 118
Query: 645 PHSIVHGDLKPANILL 660
+ HG++ N+LL
Sbjct: 119 -KGLTHGNVCAKNVLL 133
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 2e-06
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 371 NSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELK-RRKEFEEALANGKLELERMK 429
E EE L R + E + ++ +A + + EELK +E E L + EL +K
Sbjct: 238 RKELEELEEELSRLEEELEELQE-ELEEAEKEI--EELKSELEELREELEELQEELLELK 294
Query: 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489
++ +E+ E+ + ++ LE+++ E ++ +EL++KI + E L+ + +EL+
Sbjct: 295 EEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLA 354
Query: 490 ---KAVKEAEELRKSRKEA 505
+A +E EE + E
Sbjct: 355 ELEEAKEELEEKLSALLEE 373
|
Length = 1163 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 2e-06
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 339 KEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAK 398
+E+L+S ++ + ++ QA+ E E EEA RR A + +ES+ + +
Sbjct: 764 EEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRR 823
Query: 399 ASESLYAEELK-RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESD 457
EEL+ +E EE L + ELE ++K+ +E+ EEL+ +K LE ++
Sbjct: 824 ERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDEL---- 879
Query: 458 QTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
KELE++ E L+ + E EL+ E +K + EEL +
Sbjct: 880 ---KELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLER 923
|
Length = 1163 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 2e-06
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH---MQV-AIKMLHPHSLQGPSE---FQQEIDILSKI 580
+FD IG G +G + L+RH QV A+K+L + S+ F +E DI++
Sbjct: 43 EDFDVIKVIGRGAFGEVQ--LVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA 100
Query: 581 RHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
+V L A + +V EY+P G L + +S D P W R A E+ L
Sbjct: 101 NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD--IPEKW-ARFYTA-EVVLALD 156
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
+HS +H D+KP N+LLD + KL+DF
Sbjct: 157 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADF 186
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 2e-06
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 28/82 (34%)
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-------------------EFLASGELTPK---- 682
H ++H D+KP+NILLDA+ KL DF ++A + P
Sbjct: 134 HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNP 193
Query: 683 -----SDVYSFGIILLRLLTGR 699
+DV+S GI L+ L TG+
Sbjct: 194 KYDIRADVWSLGISLVELATGQ 215
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 63/231 (27%), Positives = 94/231 (40%), Gaps = 67/231 (29%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLH-PHSLQG-PSEFQQEIDILSKIRHPNL 585
FD +IGEG YG +YK + VA+K + + +G P +EI IL ++ H N+
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI 68
Query: 586 VTLVGACPEVWT----------------LVYEYLPN---GSLEDRLS--CKDNSPPLSWQ 624
V L E+ T LV+EY+ + G LE L +D+
Sbjct: 69 VNLK----EIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDH------- 117
Query: 625 TRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------- 671
I + + +L L+ C + +H D+K +NILL+ KL+DF
Sbjct: 118 ----IKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRP 173
Query: 672 -------------EFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEV 708
E L E P DV+S G IL L T +P +E+
Sbjct: 174 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL 224
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 48/222 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
++G G +G++ KG+ + + VA+K+L + P+ E +E +++ ++ +P +V
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVR 60
Query: 588 LVGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC-SVLIFLHSCKP 645
++G C E W LV E G L L + + TEL V + + +
Sbjct: 61 MIGICEAESWMLVMELAELGPLNKFLQKNKH-------VTEKNITELVHQVSMGMKYLEE 113
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASG 677
+ VH DL N+LL +K+SDF E +
Sbjct: 114 TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173
Query: 678 ELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 716
+ + KSDV+SFG+++ + +P G+ EV +++G+
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE 215
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSK-IRHPNLVT 587
IG+G +G + L +H A+K+L ++ E + E ++L K ++HP LV
Sbjct: 3 IGKGSFGKVL--LAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 588 LVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCK 644
L + + V +Y+ G L L + + P + R R A E+ S L +LHS
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFP----EPRARFYAAEIASALGYLHSLN 116
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF 671
I++ DLKP NILLD+ L+DF
Sbjct: 117 ---IIYRDLKPENILLDSQGHVVLTDF 140
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 3e-06
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 4/142 (2%)
Query: 363 AQAMAEAENSRRE--AFEEAL--RRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
Q E+ A EE L + E + + E L +E +E L
Sbjct: 192 GQLSELLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEEKERL 251
Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
K L ++ E ++ + L + L ++ E + +ELE++I E L+ +
Sbjct: 252 EELKARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREIEELEEELEGLR 311
Query: 479 KEQDELQMERDKAVKEAEELRK 500
+EL+ +K E L K
Sbjct: 312 ALLEELEELLEKLKSLEERLEK 333
|
Length = 908 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 3e-06
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 37/199 (18%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLV 589
+IG G +G++Y + + + VAIK + Q ++Q +E+ L +I+HPN +
Sbjct: 32 EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91
Query: 590 GACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G T LV EY GS D L + PL I L +LHS H+
Sbjct: 92 GCYLREHTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HN 145
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------EFLAS--------------GELTPKS 683
++H D+K NILL KL+DF F+ + G+ K
Sbjct: 146 MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKV 205
Query: 684 DVYSFGIILLRLLTGRPAL 702
DV+S GI + L +P L
Sbjct: 206 DVWSLGITCIELAERKPPL 224
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 4e-06
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 49/205 (23%)
Query: 554 VAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPNLVTLVGACPEVWTL--VYEYLPNGSLE 609
VA+KML + + S+ E++++ I +H N++ L+GAC + L + EY G+L
Sbjct: 50 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 109
Query: 610 DRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 656
+ L + ++++ + ++ + +L S K +H DL
Sbjct: 110 EYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAAR 166
Query: 657 NILLDANFVSKLSDF---------------------------EFLASGELTPKSDVYSFG 689
N+L+ N V K++DF E L T +SDV+SFG
Sbjct: 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 226
Query: 690 IILLRLLT--GRPALGITKEVQYAL 712
+++ + T G P GI E + L
Sbjct: 227 VLMWEIFTLGGSPYPGIPVEELFKL 251
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 5e-06
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF-EEALA 419
+L + E + E+ K+ K+ + S+ EEL+R+ E + LA
Sbjct: 668 ELKELEEELAELEAQ-LEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+ ELE+++ + +E+ EEL+ ++ L+ ++ ELE+++ S E L K+
Sbjct: 727 ALEEELEQLQSRLEELEEELEELEEELEELQERLE-------ELEEELESLEEALAKLKE 779
Query: 480 EQDELQMERDKAVKEAEELRKSRKEA 505
E +EL+ +R +E EEL + +EA
Sbjct: 780 EIEELEEKRQALQEELEELEEELEEA 805
|
Length = 1163 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 6e-06
Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 361 QLAQAMAEAENSRR------EAFEEALRRGKAEKDAIESIRR--AKASESLYAEELK--- 409
+L + E E EEA + + K +E +R + E L + +
Sbjct: 240 ELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLELKEEIEE 299
Query: 410 ----------RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQT 459
R +E E L + LE +K++ + + EEL+ LE +AE ++
Sbjct: 300 LEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEA 359
Query: 460 AKELEQK----IISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSS 508
+ELE+K + EL + ++E EL+ E + E EEL++ +
Sbjct: 360 KEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEER 412
|
Length = 1163 |
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 8e-06
Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 11/155 (7%)
Query: 361 QLAQAMAEAEN--SRREAFEEALRRGKAEKDAIESIRRAKASE-----SLYAEELKRRKE 413
+LA+ AE + + E E + + +D + E + E K E
Sbjct: 323 RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAE 382
Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKI---ISA 470
+ L + + +LE++K++ +E+ EL ++ L ++A+ + +E KI
Sbjct: 383 TRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEE 442
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
E + ++ E ++E+ A E +
Sbjct: 443 KEDKA-LEIKKQEWKLEQLAADLSKYEQELYDLKE 476
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 8e-06
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 43/219 (19%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
+G G +G++YKGL + VAIK L S + E E +++ + +P++ L
Sbjct: 15 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C L+ + +P G L D + +++ + Q + ++ + +L
Sbjct: 75 LGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEE---RR 129
Query: 648 IVHGDLKPANILLDANFVSKLSDF-----------EFLASGELTP--------------- 681
+VH DL N+L+ K++DF E+ A G P
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYT 189
Query: 682 -KSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 716
+SDV+S+G+ + L+T +P GI E+ L+ G+
Sbjct: 190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 228
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
+G G +G +Y R + V P S + E + EI +L +RH +V
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69
Query: 589 VGAC--PE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G PE ++ EY+P GS++D+L L+ R ++ + +LHS
Sbjct: 70 YGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHS-- 124
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF 671
+ IVH D+K ANIL D+ KL DF
Sbjct: 125 -NMIVHRDIKGANILRDSAGNVKLGDF 150
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 373 RREAFEEALRRGKAEKDAI----ESIRRAKAS--------ESLYAEELKRRKEFEEALAN 420
R + +AL++ KAE +A+ E++ ES E +R K EE L+
Sbjct: 25 RIKEIRKALKKAKAELEALNKALEALEIELEDLENQVSQLESEIQEIRERIKRAEEKLSA 84
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
K E E E+QIA ++ + LE ++AE + ++LE++I E L+ +K
Sbjct: 85 VKDERELRALNI-----EIQIAKERINSLEDELAELMEEIEKLEKEIEDLKERLERLEKN 139
Query: 481 QDELQMERDKAVKEAEELRK--SRKEASSSSHMPQ 513
E + ++ V E E + S K +
Sbjct: 140 LAEAEARLEEEVAEIREEGQELSSKREELKEKLDP 174
|
Length = 239 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 536 IGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTL 588
+G G +G++YKG+ + VAIK+L + S + E E +++ + P + L
Sbjct: 15 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C LV + +P G L D + ++N + Q + ++ + +L +
Sbjct: 75 LGICLTSTVQLVTQLMPYGCLLDYV--RENKDRIGSQDLLNWCVQIAKGMSYLEEVR--- 129
Query: 648 IVHGDLKPANILLDANFVSKLSDF-----------EFLASG----------------ELT 680
+VH DL N+L+ + K++DF E+ A G T
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFT 189
Query: 681 PKSDVYSFGIILLRLLT--GRPALGI-TKEVQYALDTGK 716
+SDV+S+G+ + L+T +P GI +E+ L+ G+
Sbjct: 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE 228
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 1e-05
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 66/215 (30%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIR-HPNLVTL 588
K+G+G YG ++K + R VA+K + + + ++ Q+ EI L ++ HPN+V L
Sbjct: 14 KLGKGAYGIVWKAIDRRTKEVVALKKIF-DAFRNATDAQRTFREIMFLQELGDHPNIVKL 72
Query: 589 VGACPEV----WTLVYEYLPN--------GSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
+ LV+EY+ LED + I +L
Sbjct: 73 LNVIKAENDKDIYLVFEYMETDLHAVIRANILED-------------VHKRYIMYQLLKA 119
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------EF---- 673
L ++HS +++H DLKP+NILL+++ KL+DF ++
Sbjct: 120 LKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATR 176
Query: 674 --------LASGELTPKSDVYSFGIILLRLLTGRP 700
L S T D++S G IL +L G+P
Sbjct: 177 WYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKP 211
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (116), Expect = 1e-05
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
A+ +AE ++A EAL++ E E +++ +A E AEELK+ +E K
Sbjct: 1677 AEEAKKAEEDEKKA-AEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEN------K 1729
Query: 423 LELERMKKQHDE---VMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
++ E KK+ +E EE + ++K + E ++ A+E+ ++ + +E + +
Sbjct: 1730 IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE--EELDE 1787
Query: 480 EQDELQMERDKAVKE 494
E ++ +ME DK +K+
Sbjct: 1788 EDEKRRMEVDKKIKD 1802
|
Length = 2084 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 51/208 (24%)
Query: 552 MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACPE---VWTLVYEYLPNG 606
+ VA+KML + + S+ E++++ I +H N++ L+GAC + ++ LV EY G
Sbjct: 45 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLV-EYASKG 103
Query: 607 SLEDRL-------------SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
+L + L +CK L+++ + A ++ + +L S K +H DL
Sbjct: 104 NLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDL 160
Query: 654 KPANILLDANFVSKLSDF---------------------------EFLASGELTPKSDVY 686
N+L+ + V K++DF E L T +SDV+
Sbjct: 161 AARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 220
Query: 687 SFGIILLRLLT--GRPALGITKEVQYAL 712
SFG++L + T G P GI E + L
Sbjct: 221 SFGVLLWEIFTLGGSPYPGIPVEELFKL 248
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 50/261 (19%)
Query: 536 IGEGGYGSIYK-------GLLRHMQVAIKMLHPHSLQGPSEFQQEID--------ILSKI 580
+G G +G +YK L ++ I + +P + E + I I ++
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALK-EINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66
Query: 581 RHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVL 637
RHPN+V E L V + + L + S K+ + + I ++ L
Sbjct: 67 RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLAL 126
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------------EF 673
+LH K IVH DL P NI+L + ++DF E
Sbjct: 127 RYLH--KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEI 184
Query: 674 LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733
+ + K+DV++FG IL ++ T +P T + A T ++ + +PL + +
Sbjct: 185 VKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA--TKIVEAVYEPLPEG---MYS 239
Query: 734 EQLANLAMRCCEMSRKSRPEL 754
E + ++ C ++RP++
Sbjct: 240 EDVTDVITSCLTPDAEARPDI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-05
Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 8/149 (5%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
+L + + E E E ++ E + K EEL+ R+ E
Sbjct: 292 ELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLE---- 347
Query: 421 GKLELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
ELE++ + +E EEL+ L LE + ELE ++ L+ K+
Sbjct: 348 ---ELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKR 404
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSS 508
E + L+ ++ + E+L++ KE +
Sbjct: 405 EIESLEERLERLSERLEDLKEELKELEAE 433
|
Length = 1163 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-05
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRR----AKASESLYAEELKRRK 412
L ++LA+ A+ E E + ++ +D +E +RR + EL +
Sbjct: 671 ELEEELAELEAQLE-KLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALE 729
Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
E E L + ELE ++ +E +EELQ L++ LE ++ ++ +L+++I E
Sbjct: 730 EELEQLQSRLEELEEELEELEEELEELQERLEE---LEEELESLEEALAKLKEEIEELEE 786
Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRK 503
Q ++E +EL+ E ++A + + L + +
Sbjct: 787 KRQALQEELEELEEELEEAERRLDALERELE 817
|
Length = 1163 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-05
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 368 EAENSRREAFEEALRRGKAEKDAI---ESIRRAKASESLYAEELKRRKEF---EEALANG 421
+ E RE E L + AE + + + E L R+E E LA
Sbjct: 336 KEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEI 395
Query: 422 KLELERMKKQHDEV-------MEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
+ ELE +K++ + + E L+ ++ LE+++ E +EL +++ E L
Sbjct: 396 RNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQL 455
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
+ + EL+ E + EEL++ KE SS
Sbjct: 456 EELRDRLKELERELAEL---QEELQRLEKELSS 485
|
Length = 1163 |
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-05
Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEE 416
+L + + E EE + + ++ I + L+ +E E
Sbjct: 263 SLELEALKIREEELRELERLLEELEEKIERLEELEREIEELEEELEGLRALLEELEELLE 322
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQK----SLLESQIAESDQTAKELEQKIISAVE 472
L + + LE+++++ +++ EL+ ++K LLE ++ E ++ +ELE+++ A+E
Sbjct: 323 KLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELEKALE 382
Query: 473 LLQNYKKEQDEL---QMERDKAVKEA-EELRKSRKE 504
L+ ++ EL E A++E EEL + KE
Sbjct: 383 RLKQLEEAIQELKEELAELSAALEEIQEELEELEKE 418
|
Length = 908 |
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-05
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 340 EDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESI----- 394
ED +L+ + + + E ++ +E R ++ ++S+
Sbjct: 565 EDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKELEERLSQLEELLQSLELSEA 624
Query: 395 -RRAKASESLYAEELKRRKE---FEEALANGKLELERMKKQ-HDEVMEELQIALDQKSLL 449
+ +E EL++ EE L ELE ++ E+ ELQ +++ L
Sbjct: 625 ENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVEELEAEIRRELQRIENEEQLE 684
Query: 450 ESQIAESDQTAKELEQ-------------KIISAVELLQNYKKEQDELQMERD---KAVK 493
E ++ E +Q +ELEQ +I +E L++ K E +EL+ E + KA++
Sbjct: 685 E-KLEELEQLEEELEQLREELEELLKKLGEIEQLIEELESRKAELEELKKELEKLEKALE 743
Query: 494 EAEELRKSRKEASSSSHMPQFFSDF 518
EELR+ +A + + +
Sbjct: 744 LLEELREKLGKAGLRADILRNLLAQ 768
|
Length = 908 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 48/157 (30%)
Query: 578 SKIRHPNLVTLVGACPEVWTLVY---EYLPNGSL-----EDRLSCKDNSPPLSWQTRIRI 629
+ RHP LV L AC + V EY G L D S + R
Sbjct: 57 NSERHPFLVNLF-ACFQTEDHVCFVMEYAAGGDLMMHIHTDVFS----------EPRAVF 105
Query: 630 -ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
A + L +LH + IV+ DLK N+LLD K++DF
Sbjct: 106 YAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC 162
Query: 672 ---EFLASGELTPKS-----DVYSFGIILLRLLTGRP 700
EFLA LT S D + G+++ +L G
Sbjct: 163 GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGES 199
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 45/204 (22%)
Query: 536 IGEGGYGSIY----KGLLRHMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
+G+G +G +Y R + V P S + E + EI +L + H +V
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69
Query: 589 VGAC---PE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G E ++ E++P GS++D+L + L+ + ++ + +LHS
Sbjct: 70 YGCLRDPMERTLSIFMEHMPGGSIKDQLK---SYGALTENVTRKYTRQILEGVSYLHS-- 124
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+ IVH D+K ANIL D+ KL DF E ++
Sbjct: 125 -NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG 183
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
K+D++S G ++ +LT +P
Sbjct: 184 EGYGRKADIWSVGCTVVEMLTEKP 207
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 27/81 (33%)
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-------------------EFLASGELTP----- 681
I+H D+KP+NILLD N KL DF ++A + P
Sbjct: 127 LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDG 186
Query: 682 ---KSDVYSFGIILLRLLTGR 699
+SDV+S GI L + TG+
Sbjct: 187 YDVRSDVWSLGITLYEVATGK 207
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIR 581
+F+ I G YG++Y L+RH + A+K ++ +L ++ QQ E DIL+
Sbjct: 2 DFETIKLISNGAYGAVY--LVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE 59
Query: 582 HPNLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
+P +V++ + C +V EY+ G D + N L E
Sbjct: 60 NPFVVSMFCSFETKRHLC-----MVMEYVEGG---DCATLLKNIGALPVDMARMYFAETV 111
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVY 686
L +LH+ + IVH DLKP N+L+ + KL+DF G ++ +++Y
Sbjct: 112 LALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 54/207 (26%)
Query: 536 IGEGGYGSIY---------KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
+G+GGYG ++ G + M+V K + + + + E +IL ++HP +V
Sbjct: 4 LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63
Query: 587 TLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE------LCSVLI 638
L+ A L+ EYL G L L R I E L + +
Sbjct: 64 DLIYAFQTGGKLYLILEYLSGGELFMHLE------------REGIFMEDTACFYLSEISL 111
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT-----------PK- 682
L I++ DLKP NILLDA KL+DF E + G +T P+
Sbjct: 112 ALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEI 171
Query: 683 ---------SDVYSFGIILLRLLTGRP 700
D +S G ++ +LTG P
Sbjct: 172 LMRSGHGKAVDWWSLGALMYDMLTGAP 198
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 2e-05
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 7/157 (4%)
Query: 356 DNLYDQLAQAMAEAEN-SRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR---- 410
L LA+ AE E R A + R +A E L E +
Sbjct: 729 SALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE 788
Query: 411 --RKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
++ +E L + L+ ++ + + EE ++ LE +IA +++ ++LE++I
Sbjct: 789 AQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIE 848
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
E +++ E +EL+ ++ E E L R
Sbjct: 849 ELSEDIESLAAEIEELEELIEELESELEALLNERASL 885
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 2e-05
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
L + AE EA R E+ + RR + E E + + +
Sbjct: 804 ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE 863
Query: 421 GKLELERMKKQHDEVMEE-------LQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
+ +E ++ + + ++ E L + + L ++ E + EL +++ E
Sbjct: 864 LEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREK 923
Query: 474 LQNYKKEQDELQMERD 489
L + + L++ D
Sbjct: 924 LAQLELRLEGLEVRID 939
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-05
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEA------LAN 420
E + E+ L + E + ES+ EEL+ R KE E L +
Sbjct: 552 EELKKKLAELEKKLDELEEELAELLKELEELGFESV--EELEERLKELEPFYNEYLELKD 609
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+ ELER +K+ ++ EEL A ++ + E ++ E + +ELE+K + E + ++E
Sbjct: 610 AEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY--SEEEYEELREE 667
Query: 481 QDELQMERDKAVKEAEELRKSRKEASSS 508
EL E E EEL K R+E +
Sbjct: 668 YLELSRELAGLRAELEELEKRREEIKKT 695
|
Length = 880 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 62/234 (26%)
Query: 536 IGEGGYGSIYKGLL---------RHMQVAIKMLHPHSLQGP-SEFQQEIDILSKI-RHPN 584
+GEG +G + R +VA+KML + + S+ E++++ I +H N
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP---------------LSWQTRI 627
++ L+GAC + L + EY G+L + L + PP LS++ +
Sbjct: 86 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR--RPPGMEYCYNPTQVPEEQLSFKDLV 143
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------- 671
A ++ + +L S K +H DL N+L+ + V K++DF
Sbjct: 144 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 672 -----------EFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 712
E L T +SDV+SFG++L + T G P G+ E + L
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 254
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIR 581
++D IG G +G + L+RH A+K+L + S+ F +E DI++
Sbjct: 44 DYDVVKVIGRGAFGEVQ--LVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 101
Query: 582 HPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
P +V L A + +V EY+P G L + +S D P W + T V++
Sbjct: 102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---KFYT--AEVVLA 154
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
L + ++H D+KP N+LLD + KL+DF
Sbjct: 155 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADF 186
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 29/158 (18%), Positives = 65/158 (41%), Gaps = 5/158 (3%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRG--KAEKDAIESIRRAKASESLYAEELKRRKE 413
D + +L + E + + E L K+ + IE + + + + L EE + +
Sbjct: 79 DEINAKLQELRKEYRELKEKRNEFNLGGRSIKSLEREIERLEKKQQTSVLTPEEERELVQ 138
Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLES---QIAESDQTAKELEQKIISA 470
+ L + ++ ++++++ E + K +I E A+E +++I
Sbjct: 139 KIKELRKELEDAKKALEENEKLKELKAEIDELKKKAREIHEKIQELANEAQEYHEEMIKL 198
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSS 508
E +KE DEL E + K+ +EL + + +
Sbjct: 199 FEEADELRKEADELHEEFVELSKKIDELHEEFRNLQNE 236
|
Length = 294 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 58/232 (25%)
Query: 536 IGEGGYGSIYK----GLLRHMQ-----VAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPN 584
+GEG +G + + G+ + VA+KML ++ + ++ E++++ I +H N
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKN 79
Query: 585 LVTLVGACPEVWTL--VYEYLPNGSLEDRLSCK-----DNSP--------PLSWQTRIRI 629
++ L+G C + L + EY G+L + L + D + LS++ +
Sbjct: 80 IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSC 139
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
A ++ + +L S + +H DL N+L+ + V K++DF
Sbjct: 140 AYQVARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNG 196
Query: 672 ---------EFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYAL 712
E L T +SDV+SFGI++ + T G P GI E + L
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 52/206 (25%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ--QEIDILSKIRH-PNLVTL 588
+G G YG + K +RH+ +A+K + ++ + + ++DI + P VT
Sbjct: 9 LGRGAYGVVDK--MRHVPTGTIMAVKRI-RATVNSQEQKRLLMDLDISMRSVDCPYTVTF 65
Query: 589 VGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSC 643
GA +VW + + + SL D+ K L+ I +IA + L +LHS
Sbjct: 66 YGALFREGDVW--ICMEVMDTSL-DKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS- 121
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTP---------------------- 681
S++H D+KP+N+L++ N KL DF SG L
Sbjct: 122 -KLSVIHRDVKPSNVLINRNGQVKLCDFGI--SGYLVDSVAKTIDAGCKPYMAPERINPE 178
Query: 682 --------KSDVYSFGIILLRLLTGR 699
KSDV+S GI ++ L TGR
Sbjct: 179 LNQKGYDVKSDVWSLGITMIELATGR 204
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 3e-05
Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 34/179 (18%)
Query: 360 DQLAQAMAEAENSRREAFEE------ALRRGKAEKDA----IESIRRAKAS-ESLYAEEL 408
++L Q + E E E E+ L + E + +E + K E E
Sbjct: 824 ERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELE 883
Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA-------- 460
+ ++E EE L + EL +K++ +++ E L+ + LE ++ E ++
Sbjct: 884 EEKEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTL 943
Query: 461 -KELEQKI--------------ISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
ELE++I + A+E + ++ +EL+ +R+ + E+L + +E
Sbjct: 944 ETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEE 1002
|
Length = 1163 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 3e-05
Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 28/181 (15%)
Query: 356 DNLYDQLAQAMAEAENSRRE------AFEEALRRGKAEKDAIESIRRAKASESLYAEEL- 408
+L D L + + E R+ + + +E + EEL
Sbjct: 698 RSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQ 757
Query: 409 KRRKEFEEAL-------ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAE------ 455
+R +E EE L A K E+E ++++ + EEL+ ++ E ++
Sbjct: 758 ERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELE 817
Query: 456 --------SDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
+Q +ELE++I E L ++E +EL+ E ++ +E EEL ++E
Sbjct: 818 SLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELED 877
Query: 508 S 508
Sbjct: 878 E 878
|
Length = 1163 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 3e-05
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 49/219 (22%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLV----T 587
IG+G YG + + H +VAIK ++ + + +EI +L +RHP++V
Sbjct: 8 IGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHI 67
Query: 588 LVGACPEVWT---LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
++ + +V+E L L + D+ P Q + +L L ++H+
Sbjct: 68 MLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHHQFFL---YQLLRALKYIHTA- 122
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF-----------------EFLAS----------- 676
++ H DLKP NIL +A+ K+ DF +++A+
Sbjct: 123 --NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 180
Query: 677 --GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD 713
+ TP D++S G I +LTG+P L K V + LD
Sbjct: 181 FFSKYTPAIDIWSIGCIFAEVLTGKP-LFPGKNVVHQLD 218
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-05
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTL 588
IG G +G + L+RH A+K+L + S+ F +E DI++ P +V L
Sbjct: 51 IGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 108
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
A + +V EY+P G L + +S D P W R T V++ L +
Sbjct: 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWA---RFYT--AEVVLALDAIHSM 161
Query: 647 SIVHGDLKPANILLDANFVSKLSDF 671
+H D+KP N+LLD + KL+DF
Sbjct: 162 GFIHRDVKPDNMLLDKSGHLKLADF 186
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 50/252 (19%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ----EIDILSKIRHPNLVTLV 589
+G G G++YK LL +A+K++ L E Q+ E++IL K P ++
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVI---PLDITVELQKQIMSELEILYKCDSPYIIGFY 65
Query: 590 GA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
GA ++ E++ GSL D + RIA + L +L S K
Sbjct: 66 GAFFVENRISICTEFMDGGSL-------DVYRKIPEHVLGRIAVAVVKGLTYLWSLK--- 115
Query: 648 IVHGDLKPANILLDANFVSKLSDF-----------------------EFLASGELTPKSD 684
I+H D+KP+N+L++ KL DF E ++ + SD
Sbjct: 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSD 175
Query: 685 VYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLD---PLAGDWPFVQAEQLANLA 740
V+S GI + L GR P I K + L+ ++D P+ F +E+ +
Sbjct: 176 VWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQF--SEKFVHFI 233
Query: 741 MRCCEMSRKSRP 752
+C K RP
Sbjct: 234 TQCMRKQPKERP 245
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 4e-05
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRHMQV-----AIKMLHPHSLQGPSEFQQ---EIDILSK 579
+F +G+G G ++ L ++ A+K+L + ++ ++ E +IL+
Sbjct: 1 KHFKKIKLLGKGDVGRVF---LVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT 57
Query: 580 IRHPNLVTLVG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
+ HP L TL LV +Y P G L L + LS + A E+ L
Sbjct: 58 LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQ-RQPGKCLSEEVARFYAAEVLLAL 116
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE--FLASGELTPKSDVYSFG 689
+LH IV+ DLKP NILL + LSDF+ + E P S G
Sbjct: 117 EYLH-LL--GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKG 167
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-05
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 356 DNLYDQLAQAMAEAENS------RREAFEEALRRGKAE----KDAIESIRRAKASESLYA 405
+N D+L+Q +++A E E+ + K ++ + S+ + +
Sbjct: 701 ENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSEL 760
Query: 406 EEL-KRRKEFEEALANGKLEL---ERMKKQH--DEVMEELQIALDQKSLLESQIAESDQT 459
+EL R +E EE L + L E E+ EL ++ S +E+++ E +Q
Sbjct: 761 KELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQK 820
Query: 460 AKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
L + + +Q ++++ +L+ E+ K++++ E +KE
Sbjct: 821 LNRLTLEKEYLEKEIQELQEQRIDLK-EQIKSIEKEIENLNGKKEE 865
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-05
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 360 DQLAQAMAE-----AENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF 414
++L + E AE EA E L E + + L + E
Sbjct: 344 EKLEELKEELESLEAELEELEAELEELESRLEELEE-QLETLRSKVAQLELQIASLNNEI 402
Query: 415 EEALANGKLE-LERMKKQHDEVMEELQIALD--QKSLLESQIAESDQTAKELEQKIISAV 471
E A +LE LE +++ + +EEL L+ + L++++ E ++ +EL++++
Sbjct: 403 ERLEA--RLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLE 460
Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
E L+ ++E +E + D A +E +L+ +R ++
Sbjct: 461 EALEELREELEEAEQALDAAERELAQLQ-ARLDS 493
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|238182 cd00293, USP_Like, Usp: Universal stress protein family | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 20/119 (16%)
Query: 46 KIYVAVAKQVKESKSVLLWALQN--SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKV 103
+I VAV +ES+ L WA + G + ++HV P
Sbjct: 1 RILVAVDGS-EESERALRWAARLARRLGAELVLLHVVDPPPSSAA--------------- 44
Query: 104 QAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGA 162
E+ ++ L+ + GV+ E + ILE G +VMG+
Sbjct: 45 -ELAELLEEEARALLEALREALAEAGVKVE-TVVLEGDPAEAILEAAEELGADLIVMGS 101
|
The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity. Length = 130 |
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 6e-05
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
+ L + +AE E + E R + E +E+++ + L+ +E
Sbjct: 235 EALEERLAELEEEKERLEELKARLLEIESLELEALKIREEELRELERLLEELEE------ 288
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
++ER+++ E+ E + ++LLE ++ K LE+++ E L+ +
Sbjct: 289 ----KIERLEELEREIEELEEELEGLRALLEELEELLEKL-KSLEERLEKLEEKLEKLES 343
Query: 480 EQDELQMERDKAVKEAEELRKSRKE 504
E +EL E+++ K EE K +E
Sbjct: 344 ELEELAEEKNELAKLLEERLKELEE 368
|
Length = 908 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 46.7 bits (110), Expect = 6e-05
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 350 LDGSVDDNLYDQLAQAMA-EAENSRREAFEEALR----RGKAEKDAIESIRRA----KAS 400
L S D +D A EA EEA + + + + A E+ ++A KA
Sbjct: 1072 LKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE 1131
Query: 401 ESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460
E+ AE+ ++ +E +A ++E+ R K + EE + A D K ++ AE + A
Sbjct: 1132 EARKAEDARKAEEARKAEDAKRVEIAR-KAEDARKAEEARKAEDAKKAEAARKAEEVRKA 1190
Query: 461 KEL----EQKIISAVELLQNYKKEQDELQMERDK---AVKEAEELRKSRKEA 505
+EL + + A + +K ++ + E K AVK+AEE +K +EA
Sbjct: 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEA 1242
|
Length = 2084 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 6e-05
Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 373 RREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQH 432
R E E L + E E +E +E EE L +LE+ ++++
Sbjct: 233 RLEELREELEELQEELKEAEEELEELTAEL---------QELEEKLEELRLEVSELEEEI 283
Query: 433 DEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAV 492
+E+ +EL ++ S LE Q + LE+++ L+ + + DEL E +
Sbjct: 284 EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELE 343
Query: 493 KEAEELRKSRKEAS 506
++ EEL++ +
Sbjct: 344 EKLEELKEELESLE 357
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 7e-05
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 49/186 (26%)
Query: 360 DQLAQAMAEAENSRREAFEEAL-------RRGKAEK--------------------DAIE 392
+++ A E RR+ EEA R+ +AE+ +E
Sbjct: 147 EEIINAKPEE---RRKLIEEAAGVSKYKERKEEAERKLERTEENLERLEDLLEELEKQLE 203
Query: 393 SIRRAKASESLYAEELKRRKEFEEALANGKL------------ELERMKKQHDEVMEELQ 440
+ R Y E +E E AL KL EL R++++ +E+ EEL+
Sbjct: 204 KLERQAEKAERYQELKAELRELELALLLAKLKELRKELEELEEELSRLEEELEELQEELE 263
Query: 441 IALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
A + L+S++ +EL +++ E L K+E +EL+ E + EEL
Sbjct: 264 EAEKEIEELKSEL-------EELREELEELQEELLELKEEIEELEGEISLLRERLEELEN 316
Query: 501 SRKEAS 506
+E
Sbjct: 317 ELEELE 322
|
Length = 1163 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 7e-05
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 536 IGEGGYGSI--YKGLLRHMQVAIK-MLHPHSLQGPSEFQ-QEIDILSKIRHPNLVTL--V 589
+G G +G + + L VAIK ++ P S ++ +E+ +L +RH N+++L +
Sbjct: 18 VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI 77
Query: 590 GACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
P E V E L G+ RL S PL Q ++ L ++HS +
Sbjct: 78 FISPLEDIYFVTELL--GTDLHRLL---TSRPLEKQFIQYFLYQILRGLKYVHSA---GV 129
Query: 649 VHGDLKPANILLDANFVSKLSDF 671
VH DLKP+NIL++ N K+ DF
Sbjct: 130 VHRDLKPSNILINENCDLKICDF 152
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (109), Expect = 8e-05
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 21/152 (13%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRA-----KASESLYAEELKRRKE---F 414
A+A +AE R+ EEA + A+K E++++A A E+ AEE + +E F
Sbjct: 1202 AEAARKAEEERK--AEEARKAEDAKK--AEAVKKAEEAKKDAEEAKKAEEERNNEEIRKF 1257
Query: 415 EEA-LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
EEA +A+ +K + +EL+ A ++K E++ AE + A E ++K A E
Sbjct: 1258 EEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK---AEE- 1313
Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
K+ DE + + ++A K+A+ +K +EA
Sbjct: 1314 ----AKKADEAKKKAEEAKKKADAAKKKAEEA 1341
|
Length = 2084 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 8e-05
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 46/200 (23%)
Query: 536 IGEGGYGSIYKGLLRHMQ-------VAIKMLHPHSLQGPSEFQ--QEIDILSKIRHPNLV 586
+G+G +G ++ L+R + A+K+L +L+ + E DIL+++ HP +V
Sbjct: 4 LGQGSFGKVF--LVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSC 643
L A L+ ++L G L RLS + + ++ EL L LHS
Sbjct: 62 KLHYAFQTEGKLYLILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL 117
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF--------------------EFLASGEL---- 679
I++ DLKP NILLD KL+DF E++A +
Sbjct: 118 ---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 174
Query: 680 -TPKSDVYSFGIILLRLLTG 698
T +D +SFG+++ +LTG
Sbjct: 175 HTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 9e-05
Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
+++ E E E R + ++ + E+L E + E EEA
Sbjct: 303 EISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEE 362
Query: 421 GKLELERMKKQHDEVMEELQIALD----QKSLLESQIAESDQTAKELEQKIISAVELLQN 476
+ +L + ++ +E+ E L+ L + + + +++ E + + LE+++ E L++
Sbjct: 363 LEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEERLERLSERLED 422
Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEA 505
K+E EL+ E ++ E EEL + +E
Sbjct: 423 LKEELKELEAELEELQTELEELNEELEEL 451
|
Length = 1163 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (109), Expect = 9e-05
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 364 QAMAEAENSRR-EAFEEALRRGKAEK-DAIESIRRA-----KASESLYAEELKRRKEFEE 416
QA +AE +R+ + ++A + KA++ E ++A KA E+ A+E K++ E +
Sbjct: 1269 QAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1328
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
A+ + K+ E + A ++ + AE+ + KE +K A +
Sbjct: 1329 KKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388
Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKE 504
KK+ DE + + ++ K+A+EL+K+
Sbjct: 1389 EKKKADEAKKKAEEDKKKADELKKAAAA 1416
|
Length = 2084 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 9e-05
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 528 HNFDPSLKIGEGGYGSIYKGLLRH--------MQVAIK--MLHPHSLQGPSEFQQEIDIL 577
+F+ IG G +G + L++ M+ K ML + + + E DIL
Sbjct: 1 DDFESIKVIGRGAFGEVR--LVQKKDTGHIYAMKKLRKSEMLEKEQV---AHVRAERDIL 55
Query: 578 SKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSW-QTRIRIATELC 634
++ +P +V L + L+ EYLP G + L KD + +TR IA
Sbjct: 56 AEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIA---- 108
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
++ + S +H D+KP N+LLDA KLSDF
Sbjct: 109 ETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDF 145
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 9e-05
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 47/200 (23%)
Query: 536 IGEGGYGSIYKGLL-----RHMQVAIKMLHPHSLQGPSEFQQ-----EIDILSKIRHPNL 585
+G G +G + +G L R + VAI L G S+ Q+ E L + H N+
Sbjct: 13 LGTGRFGELCRGCLKLPSKRELPVAIHTLR----AGCSDKQRRGFLAEALTLGQFDHSNI 68
Query: 586 VTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
V L G T+ V EY+ NG+L+ L + + L + + L S + +L
Sbjct: 69 VRLEGVITRGNTMMIVTEYMSNGALDSFL--RKHEGQLVAGQLMGMLPGLASGMKYLSEM 126
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASG 677
VH L +L++++ V K+S F E +
Sbjct: 127 ---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH 183
Query: 678 ELTPKSDVYSFGIILLRLLT 697
+ SDV+SFGI++ +++
Sbjct: 184 HFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 45.9 bits (108), Expect = 1e-04
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
A+ + +AE +++ E+ ++ EK E +++A+ + A E ++ E ++ A
Sbjct: 1622 AEELKKAEEEKKKV-EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680
Query: 423 LELERMKKQHDEVM----EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
+ E +K+ E + EE + A + K + ++++ K E+ I A E K
Sbjct: 1681 KKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA----K 1736
Query: 479 KEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQ 513
KE +E DK K+AEE +K +E +H+ +
Sbjct: 1737 KEAEE-----DK--KKAEEAKKDEEEKKKIAHLKK 1764
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 45.9 bits (108), Expect = 1e-04
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 355 DDNLYDQLAQAMAEAENSRRE---AFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
D N+ + A+ +AE +R E E ++ KAE+ + KA E AEE K++
Sbjct: 1575 DKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634
Query: 412 KE-FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA 470
E ++ A K + E +KK +E + +K+ + + AE + A+E E+K A
Sbjct: 1635 VEQLKKKEAEEKKKAEELKKAEEENKIKAA-EEAKKAEEDKKKAEEAKKAEEDEKKAAEA 1693
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
++ K+ +EL+ + + K+AEEL+K+ +E
Sbjct: 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEE 1727
|
Length = 2084 |
| >gnl|CDD|224755 COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
+LA+A R+A +A+ R K + +E + AE+L+ + E AL
Sbjct: 38 SELAKA--------RQALAQAIARQKQLERKLEEAQA-------RAEKLEEKA--ELALQ 80
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
G +L R E +EE Q D LE+++ ++++ ++L++++ + + + +
Sbjct: 81 AGNEDLAR------EALEEKQSLEDLAKALEAELQQAEEQVEKLKKQLAALEQKIAELRA 134
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF 514
+++ L R A K E++ +S SSSS M F
Sbjct: 135 KKEAL-KARKAAAKAQEKVNRSLGGGSSSSAMAAF 168
|
Length = 225 |
| >gnl|CDD|217843 pfam04012, PspA_IM30, PspA/IM30 family | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 31/155 (20%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
LAQ +A + R+ E+ + K E A ++ K +E L E L E+
Sbjct: 44 QALAQVIARQKQLERKLEEQKEQAKKLENKARAALT--KGNEELAREALAEIATLEKQAE 101
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+ + + + A++Q L Q+A LE KI Q K
Sbjct: 102 -----------ALETQLTQQRSAVEQ---LRKQLA-------ALETKI-------QQLKA 133
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF 514
++ L+ R KA K E + S AS+ S F
Sbjct: 134 KKTALKA-RLKAAKAQEAVNTSLGSASTESATDSF 167
|
This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma(54) containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator. Length = 220 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 45/198 (22%)
Query: 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQ---EIDILSKIRHPNLVTLV 589
+G G G + K L R + +A K++H L+ P+ Q E+ +L + P +V
Sbjct: 9 LGAGNGGVVTKVLHRPSGLIMARKLIH---LEIKPAIRNQIIRELKVLHECNSPYIVGFY 65
Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
GA E+ ++ E++ GSL D++ K P + +I IA + L +L + H
Sbjct: 66 GAFYSDGEI-SICMEHMDGGSL-DQVLKKAGRIPENILGKISIA--VLRGLTYLR--EKH 119
Query: 647 SIVHGDLKPANILLDANFVSKLSDFEFLASGEL-------------------------TP 681
I+H D+KP+NIL+++ KL DF SG+L T
Sbjct: 120 KIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLIDSMANSFVGTRSYMSPERLQGTHYTV 177
Query: 682 KSDVYSFGIILLRLLTGR 699
+SD++S G+ L+ + GR
Sbjct: 178 QSDIWSLGLSLVEMAIGR 195
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-04
Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 385 KAEKDAIESIRRAKASESLYAEELKRRKEFE--EALANGKLELERMKKQHDEVMEELQIA 442
+AE++A + AK AE +K+ E E + + E E+ ++ +++L+
Sbjct: 35 EAEEEAKRILEEAKKE----AEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKR 90
Query: 443 LDQK-SLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
L QK L+ ++ ++ +ELE+K + Q +K+++EL+ ++ ++E E +
Sbjct: 91 LLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
Length = 520 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-04
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 373 RREAFEEALRRGKAE--KDAIESIRRAKAS-ESLYAEELKRRKEFEEALANGKLELERMK 429
E AL K + + +E + + E E + +E E+ + K ELE ++
Sbjct: 221 ELRELELALLLAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELR 280
Query: 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489
++ +E+ EEL ++ LE +I+ + +ELE + L+ ++ +EL+ + +
Sbjct: 281 EELEELQEELLELKEEIEELEGEISLLRERLEELENE-------LEELEERLEELKEKIE 333
Query: 490 KAVKEAEELRKSRKEASS 507
+E EE +E
Sbjct: 334 ALKEELEERETLLEELEQ 351
|
Length = 1163 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-04
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELER 427
E E +E L+ + E + + + E E E EE + + EL
Sbjct: 235 EELREELEELQEELKEAEEELEELT--AELQELEEKLEELRLEVSELEEEIEELQKELYA 292
Query: 428 MKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487
+ + + ++ QI ++ + LE Q+ E + +ELE K+ E L +++ +EL+ E
Sbjct: 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEE 352
Query: 488 RDKAVKEAEELRKSRKEASSSSH 510
+ E EEL +E S
Sbjct: 353 LESLEAELEELEAELEELESRLE 375
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-04
Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEE 416
L +++AQ E E E R +AE++ E+ + E+ + + K E
Sbjct: 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
AL + EL + ++ + E L+ + + E ++ + ++ +EL + I S ++
Sbjct: 804 ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE 863
Query: 477 YKKEQDELQMERDKAVKE--------------AEELRKSRKEASS 507
++ +EL+ E + + E EEL + +E S
Sbjct: 864 LEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 535 KIGEGGYG-----SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
+IG G +G IY V ++ S + +EF Q+ D ++HPN++ +
Sbjct: 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61
Query: 590 GACPEV--WTLVYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSC 643
G C E + LV+EY G L+ LS + NS L Q R+A E+ + + +H
Sbjct: 62 GQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ---RMACEIAAGVTHMHK- 117
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF 671
H+ +H DL N L ++ K+ D+
Sbjct: 118 --HNFLHSDLALRNCFLTSDLTVKVGDY 143
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 28/96 (29%)
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
A E+ L FLH I++ DLK N+LLD+ K++DF
Sbjct: 102 AAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158
Query: 672 -------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E L+ P D ++ G++L +L G+
Sbjct: 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQS 194
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-04
Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 43/184 (23%)
Query: 341 DLQSSPPSVLDGSVDDNLYD-QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKA 399
DL P +++GS D LY L + + A E LR R +A
Sbjct: 569 DLD---PQLVEGSDSDTLYGVSLDLQRLDVPDY--AANETELRE-----------RLQQA 612
Query: 400 SESLYAEELKRRKEFEEALA---------------------NGKLELERMKKQHDEVMEE 438
E+L + ++K+ EE L +L+L+R++ + + ++
Sbjct: 613 EEALQSAV-AKQKQAEEQLVQANAELEEQKRAEAEARTALKQARLDLQRLQNEQQSLKDK 671
Query: 439 LQIAL-DQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEE 497
L++A+ ++K E+Q+ + D K+L ++ + L+ K + EL+ ER + E
Sbjct: 672 LELAIAERKQQAETQLRQLDAQLKQLLEQQQAF---LEALKDDFRELRTERLAKWQVVEG 728
Query: 498 LRKS 501
+
Sbjct: 729 ELDN 732
|
This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication. Length = 1198 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKML-------HPHSLQGPSEFQQEIDILSKIRHPN 584
IG G +G ++ L+R A+K+L + + E DIL+ P
Sbjct: 9 IGRGAFGEVW--LVRDKDTGQVYAMKVLRKSDMIKRNQI----AHVRAERDILADADSPW 62
Query: 585 LVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
+V L ++ LV EY+P G L + L KD P R IA EL
Sbjct: 63 IVKLY------YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPE-ET-ARFYIA-ELVLA 113
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
L +H +H D+KP NIL+DA+ KL+DF
Sbjct: 114 LDSVHKL---GFIHRDIKPDNILIDADGHIKLADF 145
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 60/220 (27%), Positives = 85/220 (38%), Gaps = 51/220 (23%)
Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHP 583
T ++ IG+G YG +YK + A+K+L P S E + E +IL + HP
Sbjct: 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHP 79
Query: 584 NLVTLVG--------ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR---IATE 632
N+V G ++W LV E GS+ + + L R+ I+
Sbjct: 80 NVVKFYGMFYKADKLVGGQLW-LVLELCNGGSVTELVKGL-----LICGQRLDEAMISYI 133
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---LASGEL-------TP- 681
L L+ L + I+H D+K NILL KL DF L S L TP
Sbjct: 134 LYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPF 193
Query: 682 -------------------KSDVYSFGIILLRLLTGRPAL 702
+ DV+S GI + L G P L
Sbjct: 194 WMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAI-ESIRRAKASESLYAEELKRRK---- 412
L + + E E R+E +EE L+ E++ + E I R + + A+E + ++
Sbjct: 72 GRAVLQEQIEEREKRRQEEYEERLQ----EREQMDEIIERIQEEDEAEAQEKREKQKKLR 127
Query: 413 -EFEEALANGKLELERMKKQHDEVMEELQIA------LDQKSLLESQIAESDQTAKELEQ 465
E +E ++E + +K+ + EEL+I +++ E++ E + KE E
Sbjct: 128 EEIDEFNEE-RIERKEEEKERER-EEELKILEYQREKAEREEEREAERRERKE-EKEREV 184
Query: 466 KIISA-VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
+ A E ++ ++E DEL+ + + E +E +K ++EA
Sbjct: 185 ARLRAQQEEAEDEREELDELRADLYQEEYERKERQKEKEEA 225
|
Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). Length = 349 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-04
Identities = 24/130 (18%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 382 RRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEALANGKLELERMKKQHDEVMEELQ 440
R K ++ + + + LK + E+ L + +LE +++Q +E+ EL
Sbjct: 667 RELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726
Query: 441 IALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
++ L+S++ +ELE+++ E L+ ++ +EL+ E + + +L++
Sbjct: 727 ALEEELEQLQSRL-------EELEEELEELEEELEELQERLEELEEELESLEEALAKLKE 779
Query: 501 SRKEASSSSH 510
+E
Sbjct: 780 EIEELEEKRQ 789
|
Length = 1163 |
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 3e-04
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELER 427
N R + L R + E+ K E L A+ LK KE E+ + EL+
Sbjct: 233 LKLNEERIDLLQELLRDEQEEIESSKQELEKEEEIL-AQVLKENKEEEKEKKLQEEELKL 291
Query: 428 MKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487
+ K+ +E+ EL +K E ++ ES++ K+LE+++ E ++ +KE EL+++
Sbjct: 292 LAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIK 351
Query: 488 RDKAVKEAEELRKSRKEASS 507
R+ +E E+L K +++
Sbjct: 352 REAEEEEEEQLEKLQEKLEQ 371
|
This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162 |
| >gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-04
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 337 PSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRR 396
P ++L S ++D +DNL D L +A A+ + ++ E++ +E +
Sbjct: 136 PVVQELVSIFNDLIDSIKEDNLKDDLESLIASAKEELDQLSKKLAELKAEEEEELERALK 195
Query: 397 AKASESL--YAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIA 454
K E L EEL R E +EA ++++ + + EEL+ ++K L ++
Sbjct: 196 EKREELLSKLEEELLARLESKEAA-----LEKQLRLEFEREKEELRKKYEEK--LRQELE 248
Query: 455 E-----SDQTAKELEQKIISAVELLQNYKKEQDE-LQMERD----------KAVKEAEEL 498
+ EL + A+EL + + KE E ++ ER+ +K E+
Sbjct: 249 RQAEAHEQKLKNELALQ---AIELQREFNKEIKEKVEEERNGRLAKLAELNSRLKGLEKA 305
Query: 499 RKSRKEASSSSH 510
SR EA +H
Sbjct: 306 LDSRSEAEDENH 317
|
Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains. Length = 493 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 49/209 (23%)
Query: 528 HNFDPSLKIGEGGYGSI----YKGLLRHMQVAIKMLHPHSLQGPSEFQ---QEIDILSKI 580
+F+ +G G +G + +KG + AIK L + + Q QE IL ++
Sbjct: 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYY--AIKCLKKREILKMKQVQHVAQEKSILMEL 75
Query: 581 RHPNLVTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
HP +V ++ + + V+ + E++ G L L P +A + L
Sbjct: 76 SHPFIVNMMCSFQDENRVY-FLLEFVVGGELFTHLRKAGRFPN-------DVAKFYHAEL 127
Query: 638 I----FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------EFLAS 676
+ +LHS I++ DLKP N+LLD K++DF E+LA
Sbjct: 128 VLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAP 184
Query: 677 GELTPKS-----DVYSFGIILLRLLTGRP 700
+ K D ++ G++L + G P
Sbjct: 185 EVIQSKGHGKAVDWWTMGVLLYEFIAGYP 213
|
Length = 329 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 39/193 (20%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLH--PHSLQGPSEF---QQEIDILSKIRHPNLVT 587
++G+G +G++Y K + +K+L P P+E QE +LSK+ HP +V
Sbjct: 7 RLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVK 66
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
+ E + ++ EY L+ +L K LS ++ +L+ +H
Sbjct: 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLS---ENQVCEWFIQLLLGVHYMH 123
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFE----FLASGEL------TP------------- 681
I+H DLK NI L N + K+ DF + S +L TP
Sbjct: 124 QRRILHRDLKAKNIFLKNNLL-KIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGY 182
Query: 682 --KSDVYSFGIIL 692
KSD++S G IL
Sbjct: 183 DSKSDIWSLGCIL 195
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-04
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
++ +E EE +A + L ++K+ +E+ EEL+ + L QI+ + LE ++
Sbjct: 684 EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE 743
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
E + KE EL+ E ++ + EE + EA
Sbjct: 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEID-----ILSKIRHPNLV 586
IG+G +G + L + A+K+L ++ E Q I +L ++HP LV
Sbjct: 3 IGKGSFGKVL--LAKRKSDGSFYAVKVLQKKTILKKKE-QNHIMAERNVLLKNLKHPFLV 59
Query: 587 TLVGA--CPEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELCSVL 637
L + E V +Y+ G L E + R R A E+ S +
Sbjct: 60 GLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFL----------EPRARFYAAEVASAI 109
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSF 688
+LHS +I++ DLKP NILLD+ L+DF G + P+ +F
Sbjct: 110 GYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG-VEPEETTSTF 156
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 4e-04
Identities = 57/238 (23%), Positives = 86/238 (36%), Gaps = 47/238 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
KIGEG YG +YK ++ VA+K L P +EI +L + + +
Sbjct: 8 KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL 67
Query: 591 ACPEVWT--------LVYEYLPNG--SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
V LV+EYL + D + + PL +T +L +
Sbjct: 68 DVEHVEEKNGKPSLYLVFEYLDSDLKKFMDS-NGRGPGRPLPAKTIKSFMYQLLKGVAHC 126
Query: 641 HSCKPHSIVHGDLKPANILLD-ANFVSKLSDFE--------------------------F 673
H H ++H DLKP N+L+D + K++D
Sbjct: 127 HK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVL 183
Query: 674 LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731
L S + D++S G I + +P E+Q L KL L P WP V
Sbjct: 184 LGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKL--LGTPTEQVWPGV 239
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 5e-04
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
+++ + + E E E E L + E +E S+ L EL E + +
Sbjct: 405 LEEIQEELEELEKELEEL-ERELEELEEEIKKLEEQINQLESKELMIAELAGAGE-KCPV 462
Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISA----VELL 474
+L E K+ + EL+ L+++ E + AE + +ELE+++ +ELL
Sbjct: 463 CGQELPEEHEKELLELYELELE-ELEEELSREKEEAELREEIEELEKELRELEEELIELL 521
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
+ + ++EL+ + +K EEL + +++
Sbjct: 522 ELEEALKEELEEKLEKLENLLEELEELKEKLQL 554
|
Length = 908 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (102), Expect = 5e-04
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIR----RAKASESLYAEELKRRKEFEEAL 418
A+ +A+ ++++A EEA + +A+K A E+ + + KA E+ A+E K++ E +
Sbjct: 1427 AEEKKKADEAKKKA-EEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKA 1485
Query: 419 ANGKLELERMKKQHDEV---------MEELQIALDQKSLLESQIAESDQTAKEL----EQ 465
K + E KK+ DE +E + A + K E++ AE + A E E+
Sbjct: 1486 DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEK 1545
Query: 466 KIISAVELLQNYKKEQDELQME--------RDKAVKEAEELRKSRK 503
K ++ + KK +++ + E ++ A+++AEE +K+ +
Sbjct: 1546 KKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE 1591
|
Length = 2084 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-04
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 32/166 (19%)
Query: 373 RREAFEEA-------LRRGKAEK-------------DAIESIRRAKASESLYAEELKRRK 412
RR FEEA RR + E+ D + + R S AE+ +R K
Sbjct: 157 RRAIFEEAAGISKYKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYK 216
Query: 413 EFEEALANGKL-----ELERMKKQHDEVMEELQIALDQKSLLESQIAESD---QTAK--- 461
E + L +L LE ++++ +E+ EEL+ A ++ L +++ E + + +
Sbjct: 217 ELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV 276
Query: 462 -ELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEAS 506
ELE++I + L E L+ ++ + L + +E
Sbjct: 277 SELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELE 322
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-04
Identities = 28/145 (19%), Positives = 57/145 (39%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
Q N R+ E + + E E E E + + E L
Sbjct: 303 QKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEE 362
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+ ELE ++ + +E+ E+L+ + + LE QIA + + LE ++ + + ++E
Sbjct: 363 LEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQE 422
Query: 481 QDELQMERDKAVKEAEELRKSRKEA 505
+EL + ++A + + E
Sbjct: 423 IEELLKKLEEAELKELQAELEELEE 447
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-04
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 385 KAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALD 444
A K+ E I+ K + +KR + EE + + ELE + ++ +E+ EL +
Sbjct: 162 NAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELRE 221
Query: 445 QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD---ELQMERDKAVKEAEELRKS 501
+ LE ++ E ++ +E+E+ L + +K ++ EL+ ++ KE EEL +
Sbjct: 222 ELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEK 281
Query: 502 RKE 504
KE
Sbjct: 282 VKE 284
|
Length = 880 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 5e-04
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 45/203 (22%)
Query: 536 IGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL----V 589
IG G +G +Y+ + +VAIK + LQ P +E+ I+ + H N++ L
Sbjct: 74 IGNGSFGVVYEAICIDTSEKVAIKKV----LQDPQYKNRELLIMKNLNHINIIFLKDYYY 129
Query: 590 GACPE------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
C + +V E++P + N+ L + +LC L ++HS
Sbjct: 130 TECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS- 188
Query: 644 KPHSIVHGDLKPANILLDAN-FVSKLSDFE-------------------------FLASG 677
I H DLKP N+L+D N KL DF L +
Sbjct: 189 --KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGAT 246
Query: 678 ELTPKSDVYSFGIILLRLLTGRP 700
T D++S G I+ ++ G P
Sbjct: 247 NYTTHIDLWSLGCIIAEMILGYP 269
|
Length = 440 |
| >gnl|CDD|226889 COG4487, COG4487, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 5e-04
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 356 DNLYDQLAQAMAEAENSR---REAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRK 412
+ + L + EA R R A ++ L + + + + ++ +E + EL +
Sbjct: 38 SRILNTLEEFEKEANEKRAQYRSAKKKELSQLEEQLINQKKEQKNLFNEQIKQFELALQD 97
Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQ-TAKELEQKIISAV 471
E LE + + D+ +E L+ LD+ S ++ + Q TA+ +E+K +
Sbjct: 98 E-----IAKLEALELLNLEKDKELELLEKELDELSK---ELQKQLQNTAEIIEKKRENNK 149
Query: 472 EL----LQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
+N KK ++ L++ER+K ++ E +
Sbjct: 150 NEERLKFENEKKLEESLELEREKFEEQLHEANLDLEFK 187
|
Length = 438 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (102), Expect = 6e-04
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
A+ +AE +++ ++ + KAE+ R + LY EE K + E + K
Sbjct: 1560 AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
Query: 423 LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL---QNYKK 479
++ E +KK +E + Q+ K + ++++ K E+ I A E + KK
Sbjct: 1620 IKAEELKKAEEEKKKVEQL----KKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKK 1675
Query: 480 EQDELQMERDKAVKEAEELRKSRKEA 505
+ +E + + K AE L+K +EA
Sbjct: 1676 KAEEAKKAEEDEKKAAEALKKEAEEA 1701
|
Length = 2084 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 6e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 28/96 (29%)
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT----- 680
A E+ L+FLH H +++ DLK NILLDA KL+DF E + +G T
Sbjct: 102 AAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158
Query: 681 ----------------PKSDVYSFGIILLRLLTGRP 700
P D ++ G+++ ++ G+P
Sbjct: 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQP 194
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 45/195 (23%), Positives = 70/195 (35%), Gaps = 35/195 (17%)
Query: 536 IGEGGYGSIYKGLLRHM--QVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVG 590
+G+GG+G + ++ A K L L +G E IL K+ +V+L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 591 A--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
A + LV + G L+ + P I A ++ L LH I
Sbjct: 61 AFETKDDLCLVMTLMNGGDLKYHIY-NVGEPGFPEARAIFYAAQIICGLEHLHQ---RRI 116
Query: 649 VHGDLKPANILLDANFVSKLSDF------------------------EFLASGELTPKSD 684
V+ DLKP N+LLD + ++SD E L D
Sbjct: 117 VYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVD 176
Query: 685 VYSFGIILLRLLTGR 699
++ G L ++ GR
Sbjct: 177 WFALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 6e-04
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 49/218 (22%)
Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
K+G G YG +YK + + A+K + + + +EI +L +++HPN++ L
Sbjct: 8 KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSA--CREIALLRELKHPNVIALQK 65
Query: 589 ---VGACPEVWTLVYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+ +VW L+++Y + ++ + K N P+ R + + L +L +H
Sbjct: 66 VFLSHSDRKVW-LLFDYAEHDLWHIIKFHRASKANKKPMQL-PRSMVKSLLYQILDGIHY 123
Query: 643 CKPHSIVHGDLKPANILL-------------DANF-------VSKLSDFE---------- 672
+ ++H DLKPANIL+ D F + L+D +
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 183
Query: 673 ---FLASGELTPKSDVYSFGIILLRLLTGRPALGITKE 707
L + T D+++ G I LLT P +E
Sbjct: 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 221
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|206034 pfam13863, DUF4200, Domain of unknown function (DUF4200) | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQ---IALDQK-SLLESQIAESDQTAKELE 464
KRR+ E +L L+ +++ + E L+ L++K L+ + + D+ KE E
Sbjct: 5 KRREMEEV-----QLALDAKREEFERREELLKQREEELEKKEEELQESLIKFDKFLKENE 59
Query: 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
K A + + KK + E + E + E EEL+ ++
Sbjct: 60 AKRRRAEKKAEEEKKLRKEKEEEIKELKAELEELKAEIEK 99
|
This family is found in eukaryotes. It is a coiled-coil domain of unknwon function. Length = 126 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 7e-04
Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 9/152 (5%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
+ Q A + E+ + + +E + + L E + E E LA
Sbjct: 284 EELQKELYALANEISRLEQQKQILRERLANLER-QLEELEAQL-EELESKLDELAEELAE 341
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE-------L 473
+ +LE +K++ + + EL+ + LES++ E ++ + L K+
Sbjct: 342 LEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
++ + + L+ R++ +E EEL K +EA
Sbjct: 402 IERLEARLERLEDRRERLQQEIEELLKKLEEA 433
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 7e-04
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 49/218 (22%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL-- 588
K+G G YG +YK + + A+K + + + +EI +L +++HPN+++L
Sbjct: 8 KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQK 65
Query: 589 ---VGACPEVWTLVYEYLPNG---SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
A +VW L+++Y + ++ + K N P+ R + + L +L +H
Sbjct: 66 VFLSHADRKVW-LLFDYAEHDLWHIIKFHRASKANKKPVQL-PRGMVKSLLYQILDGIHY 123
Query: 643 CKPHSIVHGDLKPANILL-------------DANF-------VSKLSDFE---------- 672
+ ++H DLKPANIL+ D F + L+D +
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 183
Query: 673 ---FLASGELTPKSDVYSFGIILLRLLTGRPALGITKE 707
L + T D+++ G I LLT P +E
Sbjct: 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 221
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 7e-04
Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 71/214 (33%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIK-MLHPHSLQGPSEFQQEID---------ILSKIRHP 583
+G G YG + +VAIK + P FQ I +L + H
Sbjct: 23 VGSGAYGQVCSAFDTKTGRKVAIKKLSRP--------FQSAIHAKRTYRELRLLKHMDHE 74
Query: 584 NLVTLVGACPEVWTLVYEYLPNGSLED-------------RLSCKDNSPPLSWQTRIR-I 629
N++ L+ +V+T P SLED L+ LS I+ +
Sbjct: 75 NVIGLL----DVFT------PASSLEDFQDVYLVTHLMGADLNNIVKCQKLS-DDHIQFL 123
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF--LASGELT------- 680
++ L ++HS I+H DLKP+NI ++ + K+ DF E+T
Sbjct: 124 VYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRW 180
Query: 681 ---PK-----------SDVYSFGIILLRLLTGRP 700
P+ D++S G I+ LLTG+
Sbjct: 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKT 214
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|222469 pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain binding to HIV | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 7e-04
Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 24/185 (12%)
Query: 329 TEGVSTLPPS-----KEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRR 383
EG LPPS +E L+ S+DD +L+Q E +E
Sbjct: 1 LEGPLGLPPSLLEKAEEIRSEGGIERLERSLDD--LPELSQRN-------EEILDEIKEL 51
Query: 384 GKAEKDAIESIRRA-------KASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436
E+ E +R S L AE + +++ L +++ + +E
Sbjct: 52 LDEEESEDEQLRAKYGERWTRPPSSELTAELREELRKYRGYLEQASESDAQLRSKLEEHE 111
Query: 437 EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAE 496
E L++ + LE+ + S + ++ + L+ + +EL+ ER+K ++E +
Sbjct: 112 ENLELLSGPEEELEALLPSSSPS---KTPEVSEQISRLRELLNKLNELKAEREKLLEELK 168
Query: 497 ELRKS 501
E +
Sbjct: 169 EKAQD 173
|
The binding of the LYPxL motif of late HIV p6Gag and EIAV p9Gag to this domain is necessary for viral budding.This domain is generally central between an N-terminal Bro1 domain, pfam03097 and a C-terminal proline-rich domain. The retroviruses thus used this domain to hijack the ESCRT system of the cell. Length = 292 |
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 8e-04
Identities = 29/141 (20%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 373 RREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQH 432
E EE + + ++ ++ ++ K Y + + +E+ + L + L R++++
Sbjct: 264 LEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEI 323
Query: 433 DEVMEELQIALDQKSLLESQIAESDQTAKELE---------QKIISAVELLQNYKKEQDE 483
+ + E ++ +++ LE + + K LE ++ + E L+ KK
Sbjct: 324 NGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTG 383
Query: 484 LQMERDKAVKEAEELRKSRKE 504
L E K KE EEL K+++E
Sbjct: 384 LTPE--KLEKELEELEKAKEE 402
|
Length = 880 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 8e-04
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 36/193 (18%)
Query: 536 IGEGGYGS--IYKGLLRHMQVAIKMLH-PHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+GEG +G + + + + A+K + P S + ++E +L+K++HPN+V +
Sbjct: 8 VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF 67
Query: 593 PEVWTL--VYEYLPNGSLEDRLSCKDNSPPL-SWQTRIRIATELCSVLIFLHSCKPHSIV 649
L V EY G L ++ K L T ++ ++C + +H + ++
Sbjct: 68 EADGHLYIVMEYCDGGDLMQKI--KLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VL 122
Query: 650 HGDLKPANILLDANFVSKLSDF----------EFLASGELTP---------------KSD 684
H D+K NI L N KL DF + + TP KSD
Sbjct: 123 HRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSD 182
Query: 685 VYSFGIILLRLLT 697
++S G IL L T
Sbjct: 183 IWSLGCILYELCT 195
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 8e-04
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 362 LAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421
+ +A EAE ++EA EA + +E + + +E L E +R + EE L
Sbjct: 38 IEEAKKEAETLKKEALLEAKEEVHKLRAELERELKERRNE-LQRLE-RRLLQREETLDR- 94
Query: 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE- 480
++E + K+ + + ++ + +++ L+ + E ++ E +++ L Q KE
Sbjct: 95 --KMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELIAEQREELERISGLTQEEAKEI 152
Query: 481 -----QDELQMERDKAVKEAEE 497
++E + E K +KE EE
Sbjct: 153 LLEEVEEEARHEAAKLIKEIEE 174
|
Members of this family are RNase Y, an endoribonuclease. The member from Bacillus subtilis, YmdA, has been shown to be involved in turnover of yitJ riboswitch [Transcription, Degradation of RNA]. Length = 514 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 9e-04
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEAL 418
++L + + E E E E+AL + E + +E E EEL R+ + L
Sbjct: 680 EELEEKIEELEEKIAEL-EKALAELRKELEELEEELEQLRKE---LEELSRQISALRKDL 735
Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
A + E+E+++++ ++ +EL + LE ++ E+++ E E +I ++ K
Sbjct: 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK 795
Query: 479 KEQDELQMERDKAVKEAEELRKSRKEASS 507
+E L+ D+ E L +
Sbjct: 796 EELKALREALDELRAELTLLNEEAANLRE 824
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 12/162 (7%)
Query: 356 DNLYDQLAQAMAEAENSRREAFE--EALRRGKAEKDAIES-IRRAKASESLYAEELKRRK 412
+ L +L+ +E E + L + IE I + + E E L+ +
Sbjct: 684 EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELE 743
Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQ---------KSLLESQIAESDQTAKEL 463
E +L ++ K+ + +EEL+ L + L S+I E +L
Sbjct: 744 EDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKL 803
Query: 464 EQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
E+++ L+ +++ + L +E++ KE +EL++ R +
Sbjct: 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDL 845
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164 |
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 380 ALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF-EEALANGKLELERMKKQHDEVMEE 438
++ G K + + +R EL+ + E EE L + K EL ++ +E+ +
Sbjct: 651 SITGGSRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQ 710
Query: 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
L+ Q L+ ++A ++ ++L+ ++ E L+ ++E +ELQ ++ +E E L
Sbjct: 711 LEELERQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESL 770
Query: 499 RKSRKE 504
++ +
Sbjct: 771 EEALAK 776
|
Length = 1163 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (100), Expect = 0.001
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 363 AQAMAEAENSRR-EAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421
A + +AE ++ E ++A KAE+D ++R+A+ E+ AEE + + +
Sbjct: 1548 ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAE--EAKKAEEARIEEVMKLYEEEK 1605
Query: 422 KLELERMKKQHDEVM--EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
K++ E KK + + EEL+ A ++K +E + + K+ E+ + E K
Sbjct: 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE--LKKAEEENKIKA 1663
Query: 480 EQDELQMERDKAVKEAEELRKSRKE 504
++ + E DK K+AEE +K+ ++
Sbjct: 1664 AEEAKKAEEDK--KKAEEAKKAEED 1686
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 0.001
Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
D+ A +AE + ++ EEA ++ A K E ++A ++ AEE K++ + + A
Sbjct: 1357 DEAEAAEEKAEAAEKKK-EEAKKKADAAKKKAEEKKKADEAKK-KAEEDKKKADELKKAA 1414
Query: 420 NGKLELERMKKQHDEV--MEELQIALDQKSLLES--QIAESDQTAKELEQKIISAVELLQ 475
K + + KK+ +E +E + ++ + + AE + A+E ++K A + +
Sbjct: 1415 AAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE 1474
Query: 476 NYKKEQ-----DELQMERDKAVKEAEELRKSRKE 504
KK + DE + + ++A K+A+E +K+ +
Sbjct: 1475 AKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (98), Expect = 0.001
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 17/156 (10%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEF---EEALA 419
A+ +A+ ++++A EEA ++ K A E+ + KA E+ AEE K+ E EEA
Sbjct: 1479 AEEAKKADEAKKKA-EEAKKKADEAKKAAEA--KKKADEAKKAEEAKKADEAKKAEEAKK 1535
Query: 420 NGKLELERMKKQHDEV--MEELQIALDQKSLLESQIAESDQT--------AKELEQKIIS 469
+ + KK+ DE+ EEL+ A ++K E++ AE D+ AK+ E+ I
Sbjct: 1536 ADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
Query: 470 AV-ELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
V +L + KK + E + ++A +AEEL+K+ +E
Sbjct: 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE 1631
|
Length = 2084 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASE-----SLYAEELKRRKEF 414
++ + +AEAE + E E + + K E A+ +E A +R +
Sbjct: 771 EEAEEELAEAE-AEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESL 829
Query: 415 EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
E +A + LE +++Q +E+ E+++ + LE I E + + L + S E L
Sbjct: 830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
+ E +EL E + + ELR+ +E
Sbjct: 890 ALLRSELEELSEELRELESKRSELRRELEEL 920
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|225714 COG3173, COG3173, Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 17/107 (15%)
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLLTGRPALG 703
P +VHGD +P N+++D + + D+E G+ P D II + A
Sbjct: 196 GPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD--PLED---LAIICWTIFDEPAARA 250
Query: 704 ITKEVQYALDTGKLKNLLDPLA-------GDWPFVQAEQLANLAMRC 743
I + ALD LL A G W A LA
Sbjct: 251 IFRLGVPALD-----ELLATYARARGLALGLWAAYIALAYFRLAAIP 292
|
Length = 321 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 536 IGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQQEID-----ILSKIRHPNLVTL 588
IG+G +G + K L A+K+L + E Q+ I +L ++HP LV L
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKE-QKHIMAERNVLLKNVKHPFLVGL 61
Query: 589 VGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCKP 645
+ E V +++ G L L ++ S P + R R A E+ S L +LHS
Sbjct: 62 HYSFQTTEKLYFVLDFVNGGELFFHLQ-RERSFP---EPRARFYAAEIASALGYLHSIN- 116
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEFLASG 677
IV+ DLKP NILLD+ L+DF G
Sbjct: 117 --IVYRDLKPENILLDSQGHVVLTDFGLCKEG 146
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|205692 pfam13514, AAA_27, AAA domain | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 13/156 (8%)
Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
GSV D L + + R+ AL K K+ IR + + + +K
Sbjct: 129 GSVRDELEKEADELWKP--RGRKPEINVAL---KELKELEAEIREVQLKTRTWKDLVKAL 183
Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQ---KSLLESQIAESDQTAKELEQKII 468
E EE LAN + EL +++K+ +E L+ L + LE Q+A E+
Sbjct: 184 DEAEEELANLRKELRQLEKEKQR-LERLRRLLPLLAERKALEQQLAA----LGEVIDLPP 238
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
AVE + + E + + + E L+ E
Sbjct: 239 DAVERYEEARAELRAARRNLELLTERLEALQAELDE 274
|
This domain is found in a number of double-strand DNA break proteins. This domain contains a P-loop motif. Length = 1118 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSK-IRHPNLVT 587
IG+G +G + L RH A+K+L ++ E E ++L K ++HP LV
Sbjct: 3 IGKGSFGKVL--LARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 588 LVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIFLHSCK 644
L + L V +Y+ G L L + R R A E+ S L +LHS
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGYLHSL- 115
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSF 688
+IV+ DLKP NILLD+ L+DF L + +F
Sbjct: 116 --NIVYRDLKPENILLDSQGHIVLTDFG-LCKENIEHNGTTSTF 156
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.001
Identities = 47/174 (27%), Positives = 70/174 (40%), Gaps = 33/174 (18%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR----- 410
+L DQL + E+A RR +AEKD +++ +A +L EE K
Sbjct: 443 HDLTDQLGEG-----GRNVHELEKARRRLEAEKDELQAALE-EAEAALELEESKVLRAQV 496
Query: 411 -----RKEFEEALANGKLELERMKKQHDEVMEELQIALDQ-----------KSLLESQIA 454
R E E LA + E E +K H +E LQ L+ K LE I
Sbjct: 497 ELSQIRSEIERRLAEKEEEFENTRKNHQRAIESLQATLEAEAKGKAEASRLKKKLEGDIN 556
Query: 455 ESDQTAKELEQKIISAVELLQNYKKEQD---ELQMERDKAVKEAEELRKSRKEA 505
E + L+ + E +N KK Q ELQ + ++ + E+ R+ A
Sbjct: 557 ELEIA---LDHANKANAEAQKNVKKYQQQVKELQTQVEEEQRAREDAREQLAVA 607
|
The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. Length = 859 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 29/90 (32%)
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------EF------------- 673
L ++HS +++H DLKP+N+LL+AN K+ DF +F
Sbjct: 121 LKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAP 177
Query: 674 ---LASGELTPKSDVYSFGIILLRLLTGRP 700
L E T DV+S G I LL +P
Sbjct: 178 ELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 0.001
Identities = 43/158 (27%), Positives = 60/158 (37%), Gaps = 34/158 (21%)
Query: 573 EIDILSKIRHPNLVTLVGACPEVW-TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
EIDIL I H ++ L+ A W + V +P D + D S PL + I I
Sbjct: 136 EIDILKTISHRAIINLIHAYR--WKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQR 192
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
L L +LH I+H D+K NI LD + L DF
Sbjct: 193 RLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSG 249
Query: 672 -------EFLASGELTPKSDVYSFGIILLRLLTGRPAL 702
E LA K+D++S G++L + L
Sbjct: 250 TLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287
|
Length = 392 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 48/163 (29%)
Query: 568 SEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLS--CKDNSPPLS 622
QQEI +++HPN++ V + E++ +V + GS ED L + P
Sbjct: 44 KLLQQEIITSRQLQHPNILPYVTSFIVDSELY-VVSPLMAYGSCEDLLKTHFPEGLP--- 99
Query: 623 WQTRIR-IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASG 677
+ I I ++ + L ++HS +H +K ++ILL + LS + G
Sbjct: 100 -ELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG 155
Query: 678 E------------------------------LTPKSDVYSFGI 690
+ KSD+YS GI
Sbjct: 156 KRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGI 198
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.002
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHP 583
+F+ ++G G G + K ++H + +A K++H ++ +E+ +L + P
Sbjct: 6 DFERISELGAGNGGVVTK--VQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP 63
Query: 584 NLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
+V GA E+ ++ E++ GSL+ L P + +++ + L +L
Sbjct: 64 YIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKEAKRIPE---EILGKVSIAVLRGLAYL 119
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------------EFLASG 677
+ H I+H D+KP+NIL+++ KL DF E L
Sbjct: 120 R--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 177
Query: 678 ELTPKSDVYSFGIILLRLLTGR 699
+ +SD++S G+ L+ L GR
Sbjct: 178 HYSVQSDIWSMGLSLVELAIGR 199
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.002
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 356 DNLYDQLAQAMAEAEN---SRREAFEEALRRGKAEKDAI-ESIRRAKASESLYAEELKRR 411
++LYD L + EA+N + L + K + + E I R K S L EL
Sbjct: 291 ESLYDLLERE-VEAKNVVEENLPILPDYLEKAKENNEHLKEEIERVKESYRLAETELGSV 349
Query: 412 KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
++FE+ EL+ ++ DE++E ++ S L+ + E ++ ++E +
Sbjct: 350 RKFEK-------ELKELESVLDEILENIEAQEVAYSELQDNLEEIEKALTDIEDEQEKVQ 402
Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFF 515
E L + +K++ E + ++ + E+ K E S+ +P+ F
Sbjct: 403 EHLTSLRKDELEARENLERLKSKLHEI-KRYMEKSNLPGLPETF 445
|
Length = 570 |
| >gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 26/154 (16%)
Query: 368 EAENSRREA------FEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421
EAE ++E EE +RR A+K+ E A E+LK+ +E + L
Sbjct: 2 EAEREQQELEERMEQMEEDMRR--AQKELEEYEETAL----ELEEKLKQEEEEAQLLEKK 55
Query: 422 KLELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
ELE ++ +EE A + ++ LE+++ E+ +LE+ E + ++
Sbjct: 56 ADELEEENRR----LEEEAAASEEERERLEAEVDEATAEVAKLEE----EREKKEAETRQ 107
Query: 481 -QDELQMERDKAVKEAEELRKSRKEASSSSHMPQ 513
Q EL+ ++ + +EL EA+++ P
Sbjct: 108 LQQELREAQEAHERARQEL----LEAAAAPTAPP 137
|
This family of proteins contain a band 4.1 domain (pfam00373), at their amino terminus. This family represents the rest of these proteins. Length = 244 |
| >gnl|CDD|109486 pfam00430, ATP-synt_B, ATP synthase B/B' CF(0) | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 360 DQLAQAMAEAENSRREA------FEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE 413
+++A + EAE ++A E+ L +A +A E I AK A++LK
Sbjct: 33 EKIANNIKEAEERLKQAAALLAEAEQQLA--QARAEASEIINNAKKE----AQKLK---- 82
Query: 414 FEEALANGKLELERMKKQ-HDEVMEELQIALDQKSLLESQIAE-SDQTAKEL 463
EE LA + + ER+ + E+ +E + AL + L Q+A + Q A++L
Sbjct: 83 -EEILAEAQKDAERLLESARAEIEQEKEQALAE---LRQQVAALAVQIAEKL 130
|
Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006. Length = 132 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 28/93 (30%)
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------LASGEL------TP-- 681
VL+ +H ++H D+K ANILL +N + KL DF F S ++ TP
Sbjct: 152 VLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYY 211
Query: 682 -------------KSDVYSFGIILLRLLT-GRP 700
K+D++S G++L LLT RP
Sbjct: 212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP 244
|
Length = 496 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (96), Expect = 0.003
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
A +AE ++ +EA ++ + K A E+ ++A+ ++ A+ K++ E + A
Sbjct: 1292 ADEAKKAEEKKK--ADEAKKKAEEAKKADEAKKKAEEAKK-KADAAKKKAEEAKKAAEAA 1348
Query: 423 LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
E EE A ++K + A++ + E ++K A + + KK+ D
Sbjct: 1349 KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD 1408
Query: 483 ELQMERDKAVKEAEELRKSRKE 504
EL+ + A K+A+E +K +E
Sbjct: 1409 ELK-KAAAAKKKADEAKKKAEE 1429
|
Length = 2084 |
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.003
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Query: 367 AEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELE 426
E E L+ + + D E ++ ++ +ELK+ KE E L ELE
Sbjct: 290 KLLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELE 349
Query: 427 RMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQM 486
++ +E E+L + LE E K +++ SA +L + + ++E +
Sbjct: 350 IKREAEEEEEEQL---EKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEK 406
Query: 487 ERDKAVKEAEELRKSRKEA 505
E ++ +E+ KE
Sbjct: 407 EAKLLLELSEQEEDLLKEE 425
|
This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162 |
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAI----ESIRRAKASESLYAEELKRRK-- 412
D L + + E ++ E E L + AE ES +A E EELK++
Sbjct: 273 LDSLREQLEEESEAKAEL-ERQLSKANAEIQQWRSKFESEGALRAEE---LEELKKKLNQ 328
Query: 413 ---EFEEAL--ANGKL-ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQK 466
E EEA AN K LE+ K + +E+LQI L++ ++ A ELE+K
Sbjct: 329 KISELEEAAEAANAKCDSLEKTKSRLQSELEDLQIELER----------ANAAASELEKK 378
Query: 467 IISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
+ ++L +K++ DELQ E D A +EA L
Sbjct: 379 QKNFDKILAEWKRKVDELQAELDTAQREARNL 410
|
The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. Length = 859 |
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.003
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDA---IESIR-RAKASESLYAEELKRRKEFE 415
++L + + E E EE L R + +A IE + R + E L AE + +E
Sbjct: 478 EELEAELEDLE-EEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKR 536
Query: 416 EALAN-----GKLELERMKKQHD--EVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
E +LE E +K+ E EE + A ++ + L S++AE + + LE +I
Sbjct: 537 ERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIR 595
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSR 502
+ + + + + E + L+ E+ +A+ E + R+ R
Sbjct: 596 TLLAAIADAEDEIERLR-EKREALAELNDERRER 628
|
Length = 880 |
| >gnl|CDD|237178 PRK12705, PRK12705, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Query: 362 LAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEE-LKRRKEFEEALAN 420
L +A EAE A EA E++ R + E EE L +++E +A A
Sbjct: 39 LQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDARAE 98
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+L+ ++ Q +E + L + LE Q+ L + LL+ E
Sbjct: 99 ---KLDNLENQLEEREKALSARELELEELEKQLDNELYRVAGLTPEQARK-LLLKLLDAE 154
Query: 481 QDELQMERDKAVKE 494
+E + +R K ++E
Sbjct: 155 LEEEKAQRVKKIEE 168
|
Length = 508 |
| >gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE-FEE 416
L D +A AE EN RR A E+ KA K AIES +AE L K+ E
Sbjct: 51 LQDSFLRAKAETENVRRRAQEDV---AKAHKFAIES----------FAESLLPVKDSLEA 97
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLE 450
ALA+ +LE++++ + +++L A ++ ++E
Sbjct: 98 ALADESGDLEKLREGVELTLKQLTSAFEKGRVVE 131
|
Length = 185 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHP-HSLQGPSEFQQEIDILSKIR-HPNLVTLVG- 590
IG+G YG ++K L + + A+K+L P H + E + E +IL + HPN+V G
Sbjct: 26 IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID--EEIEAEYNILKALSDHPNVVKFYGM 83
Query: 591 -------ACPEVWTLVYEYLPNGSLEDRLSC-----KDNSPPLSWQTRIRIATELCSVLI 638
++W LV E GS+ D + + P+ IA L L+
Sbjct: 84 YYKKDVKNGDQLW-LVLELCNGGSVTDLVKGFLKRGERMEEPI-------IAYILHEALM 135
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELT 680
L + +H D+K NILL KL DF S +LT
Sbjct: 136 GLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG--VSAQLT 175
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.003
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 26/140 (18%)
Query: 532 PSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HP 583
LK+ +G +G + +L+H +Q IK + +++ E + ++ +P
Sbjct: 20 KKLKLIDGKFGKVS--VLKHKPTQKLFVQKIIKAKNFNAI--------EPMVHQLMKDNP 69
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
N + L + + L+ +Y+ +G L D L LS +I +L L LH
Sbjct: 70 NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLK---KEGKLSEAEVKKIIRQLVEALNDLH 126
Query: 642 SCKPHSIVHGDLKPANILLD 661
H+I+H D+K N+L D
Sbjct: 127 K---HNIIHNDIKLENVLYD 143
|
Length = 267 |
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.003
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 39/131 (29%)
Query: 376 AFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEV 435
AFE A R G E I AK L E+ K +L +
Sbjct: 490 AFEIAKRLGLPE----NIIEEAKK---LIGED--------------KEKLNEL------- 521
Query: 436 MEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEA 495
IA SL E + E +Q A+E E + A +L + ++++++LQ E DK ++EA
Sbjct: 522 -----IA----SLEELER-ELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEA 571
Query: 496 E-ELRKSRKEA 505
E E +++ KEA
Sbjct: 572 EKEAQQAIKEA 582
|
Length = 782 |
| >gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 377 FEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436
LR G + D I RA +E A+ KR E E A +L+ R +++ V
Sbjct: 65 LNRNLRSGVFQLDDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQERE--AVR 122
Query: 437 EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAE 496
+EL A + + ++A + A++L+ ++ + E + + + LQ + + A
Sbjct: 123 QELAAARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASAT 182
Query: 497 ELRKSRKEASSSS 509
+L+ + S
Sbjct: 183 QLKSQVLDLKLRS 195
|
Length = 499 |
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Query: 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
+ L + E + E +E + + I K EEL+R E L
Sbjct: 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRL---SEEL 422
Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478
A+ + ++ + +E+ EE + + E ++ + + EQ++ E +
Sbjct: 423 ADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
Query: 479 KEQDELQMERDKAVKEAEELRKS 501
KE +LQ E +A +A +
Sbjct: 483 KELSKLQRELAEAEAQARASEER 505
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164 |
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.004
Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 26/163 (15%)
Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELK------- 409
+L +L+ + + EE + R +A IE E Y E+
Sbjct: 783 DLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
Query: 410 -----RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELE 464
+ K E+ + N + E + +E +EEL+ AL LES++ +L+
Sbjct: 843 IDLKEQIKSIEKEIENLNGKKEEL----EEELEELEAALRD---LESRL-------GDLK 888
Query: 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
++ L+ +++ +EL+ + +K K EL+ +
Sbjct: 889 KERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164 |
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.004
Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 357 NLYDQLAQAMAEAEN---SRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKE 413
L + + E S E E+ + + + +E + K L +R KE
Sbjct: 308 EGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEK--NELAKLLEERLKE 365
Query: 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL 473
EE L + ELE+ ++ ++ E +Q ++ + L + + E + +ELE++ +E
Sbjct: 366 LEERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKE----LEE 421
Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSH 510
L+ +E +E + ++ + + E E + +
Sbjct: 422 LERELEELEEEIKKLEEQINQLESKELMIAELAGAGE 458
|
Length = 908 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 0.004
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 368 EAENSRREAFEEALRRGKAEKDAIESIRRA--KASESLYAEELKRRKEFEEALANGKLEL 425
EA+ + E E +R+ + + A + R+A KA E+ A+ELK+ +E ++A K E
Sbjct: 1241 EAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE 1300
Query: 426 ERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQ 485
++ + + EE + A + K E ++D K+ E+ +A + DE +
Sbjct: 1301 KKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE 1360
Query: 486 MERDKAVKEAEELRKS 501
+K EA E +K
Sbjct: 1361 AAEEK--AEAAEKKKE 1374
|
Length = 2084 |
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 359 YDQLAQAMAEAENSRREAFEE--ALRRGKAEKDA-IESIRRAKAS------------ESL 403
++L + + E + +EA EE L E + +E +R + +L
Sbjct: 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293
Query: 404 YAE--ELKRRKEF-EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460
E L+++K+ E LAN + +LE ++ Q +E+ +L ++ + LE ++ E +
Sbjct: 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEEL 353
Query: 461 KELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
+ LE ++ L+ + +EL+ + + + +L ++
Sbjct: 354 ESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNN 400
|
SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGP---SEFQQEIDILSKIR 581
+FD +G G +G + ++R A+K++ L S F++E DILS
Sbjct: 2 DFDVKSLVGRGHFGEVQ--VVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN 59
Query: 582 HPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639
P + L A + LV EY P G L L+ ++ + + L +++
Sbjct: 60 SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED--QFD-EDMAQFY--LAELVLA 114
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
+HS VH D+KP N+L+D KL+DF
Sbjct: 115 IHSVHQMGYVHRDIKPENVLIDRTGHIKLADF 146
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|221389 pfam12037, DUF3523, Domain of unknown function (DUF3523) | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 379 EALRRG-KAEKDAIESIRRA-KASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436
AL RG KA ++ +ES A KA E +E R+ E E + + + + K + V
Sbjct: 32 TALERGAKALRE-LESSPHAKKAFELSKMQEKTRQAELEAKIKEYEAQQAQAKLERARVE 90
Query: 437 EELQIALDQKSLLESQIAESDQTAK---ELEQKIISAVELLQNYKKEQDELQMERDKAVK 493
E +++ L+ Q + Q A+ EL +K EL Q ++ ++ L+M+ + ++
Sbjct: 91 AE-----ERRKTLQEQTQQEQQRAQYQDELARKRYQK-ELEQQRRQNEELLKMQEESVLR 144
Query: 494 EAEELRKSRKE 504
+ E +R++ +E
Sbjct: 145 Q-EAMRRATEE 154
|
This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 257 to 277 amino acids in length. This domain is found associated with pfam00004. This domain has a conserved LER sequence motif. Length = 276 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 855 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.98 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.98 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.98 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.98 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.98 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.98 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.98 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.98 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.98 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.98 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.98 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.98 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.98 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.98 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.98 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.98 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.98 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.98 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.98 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.98 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.98 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.98 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.98 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.98 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.98 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.98 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.98 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.98 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.98 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.98 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.98 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.98 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.98 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.98 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.98 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.98 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.97 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.97 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.97 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.97 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.97 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.97 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.97 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.97 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.97 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.97 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.97 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.97 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.97 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.97 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.97 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.97 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.96 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.96 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.96 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.96 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.96 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.96 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.96 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.96 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.96 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.96 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.96 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.96 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.96 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.95 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.95 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.95 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.95 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.95 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.95 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.95 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.95 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.94 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.94 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.93 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.93 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.92 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.92 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.91 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.91 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.89 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.89 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.89 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.88 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.88 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.87 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.87 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.84 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.83 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.82 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.8 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.79 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.79 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.77 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.76 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.76 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.74 | |
| cd01989 | 146 | STK_N The N-terminal domain of Eukaryotic Serine T | 99.73 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.72 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.72 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.68 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.67 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.66 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.66 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.65 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.64 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.64 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.63 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.62 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.61 | |
| PF04564 | 73 | U-box: U-box domain; InterPro: IPR003613 Quality c | 99.6 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.6 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.59 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.59 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.52 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.5 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.5 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.45 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.34 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.3 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.19 | |
| cd01987 | 124 | USP_OKCHK USP domain is located between the N-term | 99.18 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.09 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.08 | |
| PRK15005 | 144 | universal stress protein F; Provisional | 99.06 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.06 | |
| PRK15456 | 142 | universal stress protein UspG; Provisional | 99.03 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 99.03 | |
| cd00293 | 130 | USP_Like Usp: Universal stress protein family. The | 99.02 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.02 | |
| PF00582 | 140 | Usp: Universal stress protein family; InterPro: IP | 99.01 | |
| cd01988 | 132 | Na_H_Antiporter_C The C-terminal domain of a subfa | 98.95 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.94 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.93 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.87 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.86 | |
| PRK09982 | 142 | universal stress protein UspD; Provisional | 98.84 | |
| PRK15118 | 144 | universal stress global response regulator UspA; P | 98.84 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.82 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.81 | |
| PRK10116 | 142 | universal stress protein UspC; Provisional | 98.75 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.7 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.65 | |
| PRK11175 | 305 | universal stress protein UspE; Provisional | 98.64 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.56 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.4 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.39 | |
| PRK11175 | 305 | universal stress protein UspE; Provisional | 98.35 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.27 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.24 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 98.19 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.17 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.13 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 98.09 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.0 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.95 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 97.9 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.9 | |
| COG0589 | 154 | UspA Universal stress protein UspA and related nuc | 97.89 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 97.82 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 97.8 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 97.74 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.72 | |
| PRK12652 | 357 | putative monovalent cation/H+ antiporter subunit E | 97.67 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 97.65 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 97.65 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 97.58 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 97.56 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 97.56 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 97.4 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 97.37 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 97.35 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 97.27 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 97.25 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.25 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 97.24 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.2 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 97.14 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 96.93 | |
| PLN02236 | 344 | choline kinase | 96.92 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 96.87 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 96.83 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 96.24 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 96.2 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-45 Score=405.56 Aligned_cols=250 Identities=47% Similarity=0.801 Sum_probs=215.9
Q ss_pred cccccchhhhhcccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee
Q 003033 514 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592 (855)
Q Consensus 514 ~~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~ 592 (855)
....|++.++..+|++|.....||+|+||.||+|.+.+ +.||||.+.....+...+|.+|+.+|.+++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999986 88999988776543145699999999999999999999999
Q ss_pred c--C-ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 593 P--E-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 593 ~--~-~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
. + ..+||||||++|+|.++|+..... +|+|..|++||.++|.||.|||...+.+||||||||+|||||.++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 4 3 379999999999999999765444 89999999999999999999999776789999999999999999999999
Q ss_pred eccccc--------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCC---------chHHHHHHhh
Q 003033 670 DFEFLA--------------------------SGELTPKSDVYSFGIILLRLLTGRPALGI---------TKEVQYALDT 714 (855)
Q Consensus 670 DFg~~~--------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~---------~~~~~~~~~~ 714 (855)
|||++. ++.++.|+|||||||+|+||+||++|.+. ..|....+..
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 997421 13456799999999999999999988763 2344456677
Q ss_pred cccccccCCCC--CCCCh-hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 715 GKLKNLLDPLA--GDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 715 ~~~~~~~d~~~--~~~p~-~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+.+..++|+.. +.++. .....+..++.+|++.+|..||+| .+|++.|+.+
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m-~~Vv~~L~~~ 352 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTM-SQVVKELEGI 352 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCH-HHHHHHHHhh
Confidence 78899999853 56664 577889999999999999999999 7788888655
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=369.10 Aligned_cols=232 Identities=34% Similarity=0.554 Sum_probs=193.0
Q ss_pred CccccceeeccCceEEEEEEECCeE-EEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceecC---ceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE---VWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~-VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~~---~~~LV~Ey 602 (855)
.+.....||.|+||+||+|.++++. ||||++....... ...|.+|+.+|.+++|||||+++|+|.+ ..+|||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3444556999999999999999988 9999998754333 4589999999999999999999999954 37899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-ceecccccCceeeCCCC-cEEEeeccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKPANILLDANF-VSKLSDFEF------- 673 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~-IvHrDLKp~NILld~~~-~~KL~DFg~------- 673 (855)
|++|+|.++|... ....|++..++.|+.|||.||.|||+ ++ ||||||||+|||++.++ ++||+|||+
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999753 35679999999999999999999999 45 99999999999999998 999999973
Q ss_pred ------------------cc--cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 674 ------------------LA--SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 674 ------------------~~--~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
+. ...|+.|+|||||||+||||+||+.||......+.+.... ....++..|..++
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-----~~~~Rp~~p~~~~ 272 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-----VGGLRPPIPKECP 272 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-----hcCCCCCCCccCC
Confidence 22 2358999999999999999999999998766533222110 1112334455567
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcCC
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCG 770 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~~ 770 (855)
..+..|+.+||..||..||++ .+++..|+.+.....
T Consensus 273 ~~l~~l~~~CW~~dp~~RP~f-~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 273 PHLSSLMERCWLVDPSRRPSF-LEIVSRLESIMSHIS 308 (362)
T ss_pred HHHHHHHHHhCCCCCCcCCCH-HHHHHHHHHHHHhhc
Confidence 889999999999999999999 899999998866443
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=359.12 Aligned_cols=226 Identities=30% Similarity=0.506 Sum_probs=192.6
Q ss_pred CCccccceeeccCceEEEEEEECCe-EEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~-~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey~~ 604 (855)
..+...+.||+|.||.||.|.+++. .||+|.++... .....|.+|+++|++|+|+|||+|+|+|.. .+|||||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 3455678899999999999999975 89999998763 356789999999999999999999999943 5899999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
.|+|.++|.. .....+...+.+.++.|||+|++||++ +++|||||.+.|||++++..+||+|||++
T Consensus 285 ~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 285 KGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred cCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 9999999965 344568889999999999999999999 89999999999999999999999999854
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhhcccccccCCCCCCCChhhHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
..+.++.|||||||||+||||+| |+.|+...... -..+..|. +-+.|..++..
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy--------Rlp~P~~CP~~ 432 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY--------RLPRPEGCPDE 432 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC--------cCCCCCCCCHH
Confidence 34567889999999999999999 89998765433 33344432 23456677899
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+.+|+..||+.+|++|||+ +.+...|+.+..
T Consensus 433 vY~lM~~CW~~~P~~RPtF-~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 433 VYELMKSCWHEDPEDRPTF-ETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHhhCCcccCCCH-HHHHHHHHHhhh
Confidence 9999999999999999999 788888887643
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=336.67 Aligned_cols=218 Identities=24% Similarity=0.362 Sum_probs=180.2
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEecee--cC-ceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PE-VWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~-~~~LV~Ey~ 603 (855)
++....||+|..|+|||+.++ ++.+|+|++..... ...+++.+|++|+..++||+||.+||+| .. ..+|+||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 345678999999999999998 57899999954432 2357889999999999999999999998 33 388999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc----------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---------- 673 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~---------- 673 (855)
.+|||++++.. .+.+++...-+|+.+|++||.|||.. ++||||||||+|||++..|.+||||||+
T Consensus 161 DgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 161 DGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred CCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 99999999843 35689999999999999999999964 5899999999999999999999999973
Q ss_pred -------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHhhcccccccCCCCCCCChh-hHH
Q 003033 674 -------------LASGELTPKSDVYSFGIILLRLLTGRPALGIT-----KEVQYALDTGKLKNLLDPLAGDWPFV-QAE 734 (855)
Q Consensus 674 -------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~-----~~~~~~~~~~~~~~~~d~~~~~~p~~-~~~ 734 (855)
+.+..|+.++||||||++++||++|+.||... .+... +..+++...+..|.. .++
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L------l~~Iv~~ppP~lP~~~fS~ 309 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL------LCAIVDEPPPRLPEGEFSP 309 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH------HHHHhcCCCCCCCcccCCH
Confidence 23567899999999999999999999998653 22221 122333333445554 778
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
++..++..||..||.+||++ ++++
T Consensus 310 ef~~FV~~CL~Kdp~~R~s~-~qLl 333 (364)
T KOG0581|consen 310 EFRSFVSCCLRKDPSERPSA-KQLL 333 (364)
T ss_pred HHHHHHHHHhcCCcccCCCH-HHHh
Confidence 99999999999999999999 6553
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=330.50 Aligned_cols=221 Identities=31% Similarity=0.472 Sum_probs=179.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~ 600 (855)
..+|.....||.|+||+||+|+++ +..||||.+..... ...+-+..|+.+|+.++|||||.|++++ ++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888899999999999999886 57899999987643 2345578999999999999999999998 56789999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC------CcEEEeecccc
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN------FVSKLSDFEFL 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~------~~~KL~DFg~~ 674 (855)
|||.||+|.++|..+ ..++..+...++.||+.||.+||+ ++||||||||.||||+.. -.+||+|||++
T Consensus 89 EyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 999999999999644 368999999999999999999999 899999999999999764 56899999743
Q ss_pred ------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 003033 675 ------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 675 ------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
..+.|+.|+|+||+|+|||+|++|++||......+......+-..++ ...+.
T Consensus 163 R~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~----~~~~~ 238 (429)
T KOG0595|consen 163 RFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV----PVLPA 238 (429)
T ss_pred hhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc----Cchhh
Confidence 35779999999999999999999999998666555433222222222 22333
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
.....+.+|+...+..+|.+|-++...
T Consensus 239 ~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 239 ELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred hccCchhhhhhHHHhcCccccCchHHh
Confidence 444556788888888898888887443
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=331.70 Aligned_cols=216 Identities=24% Similarity=0.333 Sum_probs=178.8
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceecC--ceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~L 598 (855)
..++|+.+..||+|+||.||.+.-+ |..+|+|+|++.... ....++.|-.+|...++|+||+||.+|++ .+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4568999999999999999999765 678999999986543 34568899999999999999999999964 7899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----- 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----- 673 (855)
||||+|||++..+|. ....|+......++.+++.|+..||. +|+|||||||+|+|||..|++||+|||+
T Consensus 219 iMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999995 34579999999999999999999999 8999999999999999999999999962
Q ss_pred -------------------------------------------------------------------cccCCCCcchhHH
Q 003033 674 -------------------------------------------------------------------LASGELTPKSDVY 686 (855)
Q Consensus 674 -------------------------------------------------------------------~~~~~~t~ksDVw 686 (855)
+.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 2233467779999
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh--hhHHHHHHHHHHhhccCCCCCCC
Q 003033 687 SFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF--VQAEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 687 SfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~--~~~~~l~~L~~~Cl~~dP~~RPs 753 (855)
|||||+||||.|.|||.........-+.-.+...+. ||. ..+.+..+||.+||. ||.+|--
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~-----fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK-----FPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc-----CCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999987665443333222222211 222 234789999999999 9999987
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=339.82 Aligned_cols=218 Identities=25% Similarity=0.400 Sum_probs=183.0
Q ss_pred CCccccceeeccCceEEEEEEE--CCeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~ 600 (855)
..|...+.||+|||+.||.++. .|..||+|++.+... ...+.+.+||+|.+.|+|||||+++++|.+ +.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999987 368899999987533 335678999999999999999999999965 689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
|+|++|+|..++. ...+|++.....++.||+.||.|||+ ++|||||||..|+||+++.++||+|||++.
T Consensus 98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999995 44679999999999999999999999 899999999999999999999999998542
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
....+..+||||+|||||-||+|+|||.... +...+..-+.. .-..|...+.+
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vkety~~Ik~~------~Y~~P~~ls~~ 244 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKETYNKIKLN------EYSMPSHLSAE 244 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHHHHHHHHhc------CcccccccCHH
Confidence 2335667999999999999999999996443 32222221111 12345566788
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+|+.++|..||.+||++ ++|+
T Consensus 245 A~dLI~~lL~~~P~~Rpsl-~~vL 267 (592)
T KOG0575|consen 245 AKDLIRKLLRPNPSERPSL-DEVL 267 (592)
T ss_pred HHHHHHHHhcCCcccCCCH-HHHh
Confidence 9999999999999999999 6664
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=335.77 Aligned_cols=217 Identities=27% Similarity=0.407 Sum_probs=181.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceecC--ceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~--~~~LV 599 (855)
.+|...+.||+|+|++||+|+.. ++.+|||++.+.-. ...+-+.+|-++|.+| .||.||+||..|+| .+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 35666778999999999999876 57899999976522 2234467899999999 89999999999965 68999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc-------
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE------- 672 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg------- 672 (855)
+||++||+|.++|... +.|+......++.+|+.||+|||+ +|||||||||+|||||.+|++||+|||
T Consensus 153 Le~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 9999999999999543 568888899999999999999999 899999999999999999999999996
Q ss_pred -------------------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 003033 673 -------------------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 673 -------------------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
++..+..++.+|+|+||||||+|+.|.|||...++.......-.
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~----- 301 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA----- 301 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH-----
Confidence 22334567789999999999999999999988877654333222
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+.-.||...++.+.+|+.+.|..||.+|++. ++|
T Consensus 302 --l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~-~qI 335 (604)
T KOG0592|consen 302 --LDYEFPEGFPEDARDLIKKLLVRDPSDRLTS-QQI 335 (604)
T ss_pred --hcccCCCCCCHHHHHHHHHHHccCccccccH-HHH
Confidence 2235666667889999999999999999998 555
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=327.33 Aligned_cols=219 Identities=27% Similarity=0.438 Sum_probs=174.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-------hhhHHHHHHHHHhcCCCcceeEecee--cCce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-------PSEFQQEIDILSKIRHPNLVTLVGAC--PEVW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-------~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~ 596 (855)
+.|...+.||.|+||.|-+|..+ ++.||||++++..... .....+|++||++|+|||||+++++| ++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 45777889999999999999776 6889999998764332 22357999999999999999999999 4567
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC---CcEEEeeccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFEF 673 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~~KL~DFg~ 673 (855)
||||||+.||+|.+++-. ...+....-..++.|++.|+.|||+ +||+||||||+||||..+ ..+||+|||+
T Consensus 252 YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred EEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999999853 3457777778899999999999999 899999999999999665 8999999984
Q ss_pred cc------------------------cC---CCCcchhHHHHHHHHHHHHhCCCCCCCchH---HHHHHhhcccccccCC
Q 003033 674 LA------------------------SG---ELTPKSDVYSFGIILLRLLTGRPALGITKE---VQYALDTGKLKNLLDP 723 (855)
Q Consensus 674 ~~------------------------~~---~~t~ksDVwSfGvvl~elltG~~pf~~~~~---~~~~~~~~~~~~~~d~ 723 (855)
+. +. .+..++|+||+|||||-+++|.|||..... ....+..|.+..
T Consensus 326 AK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f---- 401 (475)
T KOG0615|consen 326 AKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF---- 401 (475)
T ss_pred hhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc----
Confidence 31 11 123478999999999999999999964322 223334443321
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
....| ...+++..+|+.++|..||++||+. +++
T Consensus 402 ~p~~w-~~Iseea~dlI~~mL~VdP~~R~s~-~ea 434 (475)
T KOG0615|consen 402 GPLQW-DRISEEALDLINWMLVVDPENRPSA-DEA 434 (475)
T ss_pred cChhh-hhhhHHHHHHHHHhhEeCcccCcCH-HHH
Confidence 11123 3567889999999999999999999 554
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=322.94 Aligned_cols=213 Identities=29% Similarity=0.381 Sum_probs=179.4
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
..++|+.++.||+|+||+||.++.+ ++.+|+|++++.... ......+|..||.+++||+||.|+..|+ +.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4568999999999999999998766 577999999876433 3567889999999999999999999995 47999
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----- 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----- 673 (855)
|+||+.||.|..+|.+ ...+++.....++.+|+.||.|||+ ++||||||||+|||||.+|+++|+|||+
T Consensus 103 Vld~~~GGeLf~hL~~---eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQR---EGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHh---cCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 9999999999999953 3468899899999999999999999 8999999999999999999999999974
Q ss_pred --------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChh
Q 003033 674 --------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 674 --------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
+....|+..+|+|||||++|||++|.|||...+... ..+..++ ....|..
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k--------~~~~p~~ 248 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK--------LPLPPGY 248 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc--------CCCCCcc
Confidence 234568899999999999999999999998765433 2223322 1123334
Q ss_pred hHHHHHHHHHHhhccCCCCCC
Q 003033 732 QAEQLANLAMRCCEMSRKSRP 752 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RP 752 (855)
.+.+..+|+.+.+..||.+|-
T Consensus 249 ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 LSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCHHHHHHHHHHhccCHHHhc
Confidence 567899999999999999995
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=317.59 Aligned_cols=221 Identities=22% Similarity=0.334 Sum_probs=182.0
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceecC------ceEEEEEec
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE------VWTLVYEYL 603 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------~~~LV~Ey~ 603 (855)
...||+|++|.||+|.+.+..||||.+....... .+.|.+|+.+|.+++|||||+++|+|.+ ..++||||+
T Consensus 25 ~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred CeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 4579999999999999999999999998654333 3567899999999999999999998843 468999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.. ...++|.....++.+++.||.|||.. .+++||||||+|||++.++.+||+|||+..
T Consensus 105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~ 179 (283)
T PHA02988 105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFK 179 (283)
T ss_pred CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccccc
Confidence 99999999953 34689999999999999999999973 378899999999999999999999998532
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|||+||+.||........ .+..+. .....|...+..+.
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~l~ 252 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKN-------NSLKLPLDCPLEIK 252 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC-------CCCCCCCcCcHHHH
Confidence 14578899999999999999999999976543221 111111 11123334567899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+|+.+||+.||.+||++ ++++..|+.+.
T Consensus 253 ~li~~cl~~dp~~Rps~-~ell~~l~~~~ 280 (283)
T PHA02988 253 CIVEACTSHDSIKRPNI-KEILYNLSLYK 280 (283)
T ss_pred HHHHHHhcCCcccCcCH-HHHHHHHHHHH
Confidence 99999999999999999 89999988764
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=328.22 Aligned_cols=228 Identities=26% Similarity=0.416 Sum_probs=182.4
Q ss_pred ccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceecC--
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACPE-- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~-- 594 (855)
..++|...++||+|+||.||+|.+. +..||||++..... .....+.+|+.+|..+ +|||||+++|+|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 3457888999999999999999752 25699999975432 2245688999999999 89999999998843
Q ss_pred -ceEEEEEecCCCCHHHHhcccCC--------------------------------------------------------
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDN-------------------------------------------------------- 617 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~-------------------------------------------------------- 617 (855)
.+++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 47899999999999999853211
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------------
Q 003033 618 ---SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------------- 675 (855)
Q Consensus 618 ---~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------------- 675 (855)
..++++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 1358889999999999999999999 799999999999999999999999998432
Q ss_pred --------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH---HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHh
Q 003033 676 --------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV---QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743 (855)
Q Consensus 676 --------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~---~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~C 743 (855)
...++.++|||||||+||||++ |.+||...... ...+..+. ....|...+..+.+|+.+|
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~c 313 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT--------RMRAPENATPEIYRIMLAC 313 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC--------CCCCCCCCCHHHHHHHHHH
Confidence 2336788999999999999997 99999754321 11111111 1112334457799999999
Q ss_pred hccCCCCCCChHHHHHHHHhhh
Q 003033 744 CEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 744 l~~dP~~RPs~~~evl~~L~~~ 765 (855)
|..||.+||++ .++++.|+.+
T Consensus 314 l~~dp~~RPs~-~el~~~l~~~ 334 (338)
T cd05102 314 WQGDPKERPTF-SALVEILGDL 334 (338)
T ss_pred ccCChhhCcCH-HHHHHHHHHH
Confidence 99999999999 8999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=309.17 Aligned_cols=224 Identities=26% Similarity=0.390 Sum_probs=177.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+.|+.+.++|+|+||.|||++.+ |..||||++...... -.+-.++||.+|++|+|||+|.|+.+|. ..++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999876 578999999754321 1344679999999999999999999994 46899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
||...-|.++= .....++......|+.|++.|+.|+|+ +++|||||||+||||+.+|.+||||||++.
T Consensus 82 ~~dhTvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 82 YCDHTVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred ecchHHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 99875555543 233458889999999999999999999 899999999999999999999999998532
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-c-----------------
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-L----------------- 717 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-~----------------- 717 (855)
...|+..+||||+||++.||++|.|.|.+..++++...... +
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 24578899999999999999999999988887766543211 1
Q ss_pred ccccC-------CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 KNLLD-------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ~~~~d-------~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.- ++...+| ..+.-+.+|+.+|+++||.+|++. ++++
T Consensus 236 ~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc-~qll 282 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSC-EQLL 282 (396)
T ss_pred eeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccH-HHHh
Confidence 11111 1112222 223468999999999999999998 5553
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=310.60 Aligned_cols=219 Identities=27% Similarity=0.433 Sum_probs=180.5
Q ss_pred CCccccceeeccCceEEEEEEE--CCeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEec-eec---CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG-ACP---EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g-~~~---~~~~LV 599 (855)
.+|.+.++||+|.||.||++.. .+..||.|.++-..... .+....|+.+|++|+|||||++++ .+. +.++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4688899999999999999865 47889999998543332 456889999999999999999998 442 237899
Q ss_pred EEecCCCCHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeCCCCcEEEeeccc----
Q 003033 600 YEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFEF---- 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld~~~~~KL~DFg~---- 673 (855)
||||.+|+|...+.. +.....+++..+++++.|+|.||..+|+..++ -|+||||||+||+|+.+|++||+|||+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999998853 33445789999999999999999999995543 389999999999999999999999973
Q ss_pred ---------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCC-
Q 003033 674 ---------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWP- 729 (855)
Q Consensus 674 ---------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p- 729 (855)
+....|+.||||||+||++|||+.-++||.+.+-... .+..+.+ ++.|
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~--------~~~p~ 250 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY--------PPLPD 250 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC--------CCCcH
Confidence 3346789999999999999999999999988754332 2233321 1233
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
...+..+..|+..|+..||..||+.
T Consensus 251 ~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHhhhHHHHHHHHHccCCcccCCCc
Confidence 5678999999999999999999985
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=334.27 Aligned_cols=237 Identities=27% Similarity=0.454 Sum_probs=190.8
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec-CceE
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP-EVWT 597 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~ 597 (855)
.++......+.+...||+|.||+||+|.|.|. ||||+++...... .+.|+.|+.+|++-||-||+-+.|+|. +...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A 463 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA 463 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence 33444444556778899999999999999764 9999999875543 567999999999999999999999994 3558
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
||.-+|+|-+|+.+|+... ..|...+.+.|+.|||+|+.|||. ++|||||||..||+|.+++.+||+|||++.
T Consensus 464 IiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999997543 458889999999999999999999 899999999999999999999999998431
Q ss_pred ----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 003033 676 ----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 ----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~ 727 (855)
..+|++.+||||||||+|||+||..||.+....+..+..|.-.-..|...
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~-- 616 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSK-- 616 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchh--
Confidence 34689999999999999999999999985444333333332211222211
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
....+++++.+|+..||.+++++||.+ .+|+..|+.+.
T Consensus 617 ~~s~~pk~mk~Ll~~C~~~~~~eRP~F-~~il~~l~~l~ 654 (678)
T KOG0193|consen 617 IRSNCPKAMKRLLSDCWKFDREERPLF-PQLLSKLEELL 654 (678)
T ss_pred hhccCHHHHHHHHHHHHhcCcccCccH-HHHHHHHHHhh
Confidence 122456789999999999999999999 67877777663
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=346.80 Aligned_cols=228 Identities=30% Similarity=0.556 Sum_probs=193.3
Q ss_pred CCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
.+....+.||+|+||+||+|...+ ..||||.++..... ...+|+||+++|..|+|||||+|+|+|. +..|
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 345567789999999999998653 56999999877654 5778999999999999999999999994 5689
Q ss_pred EEEEecCCCCHHHHhcccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 598 LVYEYLPNGSLEDRLSCKDN-----------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
+|+|||..|||.++|....+ .++|+..+.+.||.|||.|+.||-+ +.+|||||-..|+|+.++..+
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEE
Confidence 99999999999999953211 3459999999999999999999999 779999999999999999999
Q ss_pred EEeeccc---------------------------cccCCCCcchhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHhhcc
Q 003033 667 KLSDFEF---------------------------LASGELTPKSDVYSFGIILLRLLT-GRPALGITK--EVQYALDTGK 716 (855)
Q Consensus 667 KL~DFg~---------------------------~~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~--~~~~~~~~~~ 716 (855)
||+|||+ +..++||++||||||||||||+++ |+.|+.+.. ++-..+..|.
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~ 722 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ 722 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC
Confidence 9999973 345789999999999999999998 888876543 3444555554
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+ -..|..++.++..|+..||+.+|++||++ .+|-..|+.+..
T Consensus 723 l--------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF-~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 723 L--------LSCPENCPTEVYSLMLECWNENPKRRPSF-KEIHSRLQAWAQ 764 (774)
T ss_pred c--------ccCCCCCCHHHHHHHHHHhhcCcccCCCH-HHHHHHHHHHHh
Confidence 4 23567778999999999999999999999 899999987633
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=297.74 Aligned_cols=223 Identities=26% Similarity=0.407 Sum_probs=184.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~E 601 (855)
..|...++||+|.||.||+|.+. ++.||||+++.....+ .....+||..|+.++||||+.|+++|+. .+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35777889999999999999876 6889999998764332 3457899999999999999999999954 6789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
||+ .+|+..+. +....|+..++..++.++++||+|||. +.|+||||||.|+|++.+|.+||+|||++
T Consensus 82 fm~-tdLe~vIk--d~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIK--DKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhc--ccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 996 58999995 455679999999999999999999999 89999999999999999999999999843
Q ss_pred -------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh-----
Q 003033 675 -------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF----- 730 (855)
Q Consensus 675 -------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~----- 730 (855)
....|+..+|+||.|||+.||+-|.|-|.+..++++.... +..+-.|....||.
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~I--f~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKI--FRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHH--HHHcCCCCcccCccccccc
Confidence 3456888999999999999999999999988887764332 22222333344442
Q ss_pred ------------------hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 731 ------------------VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 731 ------------------~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+..+.+|+.+++.+||.+|.++ ++++
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita-~qaL 279 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITA-SQAL 279 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccH-HHHh
Confidence 234577999999999999999999 5554
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=321.83 Aligned_cols=221 Identities=29% Similarity=0.387 Sum_probs=180.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec----CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~L 598 (855)
.+.|+.+.+||+|+||.||+++.. +..||+|+++.+.. ....-..+||.||++|+|||||+|.+... ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 346888889999999999999875 57799999987653 33455679999999999999999999873 36899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
|+|||+. ||.-++. ...-.|+..++..|+.|++.||.|+|. ++|+|||||.+|||||.+|++||+|||++.
T Consensus 196 VFeYMdh-DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999975 8888874 334468999999999999999999999 899999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC--
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP-- 729 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p-- 729 (855)
...|++.+|+||.||||.||++|+|.|.+..++.+.-.+-++-. -|....|+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG--SP~e~~W~~~ 347 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG--SPTEDYWPVS 347 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC--CCChhccccc
Confidence 34588899999999999999999999999988876544322211 11111122
Q ss_pred ----------------------hhhHHHHHHHHHHhhccCCCCCCChH
Q 003033 730 ----------------------FVQAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 730 ----------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
...+....+|+..+|..||.+|.|+.
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~ 395 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTAS 395 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHH
Confidence 11245688999999999999999983
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=318.69 Aligned_cols=222 Identities=29% Similarity=0.488 Sum_probs=180.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cC--ceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PE--VWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~--~~~LV~E 601 (855)
.++...+.||+|+||.||++... +...|||.+........+.+.+|+.+|.+|+|||||+++|.. .+ .++|+||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35677888999999999999886 488999998765322255688999999999999999999963 34 4789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeeccccc-----
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLA----- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~----- 675 (855)
|+++|+|.+++...+. .|+...+.+++.||++||.|||+ +|||||||||+|||++. ++.+||+|||...
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999964332 69999999999999999999998 89999999999999999 7999999998321
Q ss_pred -----------------------cC-CCCcchhHHHHHHHHHHHHhCCCCCCC-chHHHHHHhhcccccccCCCCCCCCh
Q 003033 676 -----------------------SG-ELTPKSDVYSFGIILLRLLTGRPALGI-TKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -----------------------~~-~~t~ksDVwSfGvvl~elltG~~pf~~-~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
.+ ....++|||||||+++||+||++||.. .......+..+.-. ..+.+|.
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-----~~P~ip~ 246 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-----SLPEIPD 246 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-----CCCCCCc
Confidence 11 112389999999999999999999975 33333333333211 2236777
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+.+..+++.+|+..||..|||+ +++|.
T Consensus 247 ~ls~~a~~Fl~~C~~~~p~~Rpta-~eLL~ 275 (313)
T KOG0198|consen 247 SLSDEAKDFLRKCFKRDPEKRPTA-EELLE 275 (313)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCH-HHHhh
Confidence 788999999999999999999999 66643
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=321.51 Aligned_cols=224 Identities=25% Similarity=0.395 Sum_probs=185.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhh--HHHHHHHHHhcC-CCcceeEeceecC---ceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIR-HPNLVTLVGACPE---VWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~--f~~Ei~iL~~l~-HpnIV~l~g~~~~---~~~L 598 (855)
.++|..+++||.|+||.||+|+-. +..||||.++..... .++ =+||+.-|++|+ |||||+|..++.+ .+++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 357888999999999999999765 678999999865433 333 358999999999 9999999999843 5789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----- 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----- 673 (855)
|||||. .+|++++..+ ..+|+...+..|+.||++||+|+|. +|+.||||||+|||+..+..+||+|||+
T Consensus 88 VfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc
Confidence 999994 6999999654 5789999999999999999999999 8999999999999999999999999984
Q ss_pred --------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh---
Q 003033 674 --------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF--- 730 (855)
Q Consensus 674 --------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~--- 730 (855)
+..+.|+.+.|+||+|||++|+.+-+|.|.+.+++++..+.-.+. -.|....|+.
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VL--GtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVL--GTPDKDSWPEGYN 239 (538)
T ss_pred cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHh--CCCccccchhHHH
Confidence 345778999999999999999999999999999887765542111 1111122221
Q ss_pred ----------------------hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 731 ----------------------VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 731 ----------------------~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+.++.+|+.+||.+||.+|||+ ++.++
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA-~~al~ 290 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTA-SQALQ 290 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccH-HHHhc
Confidence 245789999999999999999999 66544
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=311.90 Aligned_cols=232 Identities=27% Similarity=0.490 Sum_probs=178.1
Q ss_pred CCccccceeeccCceEEEEEEEC------------------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL 588 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~------------------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l 588 (855)
++|...++||+|+||.||+|.+. +..||||.+...... ....|.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46778889999999999999753 236999999765322 24578999999999999999999
Q ss_pred eceec--CceEEEEEecCCCCHHHHhcccC----------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 003033 589 VGACP--EVWTLVYEYLPNGSLEDRLSCKD----------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650 (855)
Q Consensus 589 ~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~----------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH 650 (855)
+|+|. +..+|||||+++|+|.+++.... ....++|.....++.||+.||.|||+ .+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence 99984 46889999999999999884321 12357889999999999999999999 79999
Q ss_pred cccccCceeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh--CCCC
Q 003033 651 GDLKPANILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT--GRPA 701 (855)
Q Consensus 651 rDLKp~NILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt--G~~p 701 (855)
|||||+|||++.++.+||+|||+.. .+.++.++|||||||++|+|++ |..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999998532 2346778999999999999987 5567
Q ss_pred CCCchHHHHHHhhcc-cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 702 LGITKEVQYALDTGK-LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 702 f~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
|.............. +...........|...+..+.+|+.+||..||.+||++ .+|.+.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~-~~i~~~l~ 303 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF-SDIHAFLT 303 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH-HHHHHHHh
Confidence 764432221111100 01100111111233445789999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=305.27 Aligned_cols=225 Identities=25% Similarity=0.408 Sum_probs=182.0
Q ss_pred cCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
..+|...+.||+|+||.||+|.+. +..||+|.++..... ....|.+|+.+|.+++||||++++|++. +..+|
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 346888899999999999999764 367999999865322 2356889999999999999999999983 46899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
||||+++|+|.+++... ...+++..++.++.||+.||.|||+ ++++||||||+|||++.++.+|++|||..
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 99999999999998532 3468999999999999999999998 79999999999999999999999999742
Q ss_pred ----------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCC
Q 003033 675 ----------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 675 ----------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p 729 (855)
..+.++.++|||||||++|||++ |.+||........ .+..+. ....|
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 230 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF--------RLPAP 230 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--------CCCCC
Confidence 12346778999999999999775 9999975543322 121111 11123
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+..+.+++.+||+.+|.+||++ +++.+.|..+
T Consensus 231 ~~~~~~~~~li~~c~~~~p~~RP~~-~~i~~~l~~~ 265 (266)
T cd05064 231 RNCPNLLHQLMLDCWQKERGERPRF-SQIHSILSKM 265 (266)
T ss_pred CCCCHHHHHHHHHHcCCCchhCCCH-HHHHHHHHhh
Confidence 3455779999999999999999999 8898888653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=310.85 Aligned_cols=226 Identities=23% Similarity=0.411 Sum_probs=182.2
Q ss_pred CCccccceeeccCceEEEEEEEC--C----eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
.+|+..+.||+|+||.||+|.+. + ..||||.++.... .....|.+|+.+++.++||||++++|+|. +..++|
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 46888999999999999999863 2 3489999875432 23567889999999999999999999984 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
+||+++|+|.+++... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 87 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 87 TQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence 9999999999998532 3458899999999999999999999 799999999999999999999999997432
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|||++ |.+||........ ....+ .....|
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~--------~~~~~~ 233 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--------ERLPQP 233 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC--------CCCCCC
Confidence 1335678999999999999998 9999976543221 11111 111122
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
...+..+.+++.+||..+|.+||++ .+++..|..+..
T Consensus 234 ~~~~~~~~~li~~cl~~~p~~Rps~-~~l~~~l~~~~~ 270 (316)
T cd05108 234 PICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMAR 270 (316)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHc
Confidence 3345678999999999999999999 788888887744
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=320.26 Aligned_cols=226 Identities=25% Similarity=0.405 Sum_probs=180.4
Q ss_pred cCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~ 595 (855)
.++|...+.||+|+||.||+|.+. +..||||+++.... .....+.+|+.+|..+ +|||||+++|+|. +.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 347888999999999999999742 35799999975432 2345688999999999 8999999999994 46
Q ss_pred eEEEEEecCCCCHHHHhcccCC----------------------------------------------------------
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------- 617 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------- 617 (855)
.++|||||++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 7899999999999998853211
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 618 --------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 618 --------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
...++|..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1258899999999999999999999 799999999999999999999999998531
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH---HHHhhcccccccCCCCCCCChhh
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ---YALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~---~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++|||||||++|||++ |.+||....... ..+..+. ....|...
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 342 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY--------RMLSPECA 342 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc--------cCCCCCCC
Confidence 2346778999999999999998 899986543221 1122111 11122233
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.++.+|+.+||+.||.+||++ .+|++.|+.
T Consensus 343 ~~~l~~li~~cl~~dP~~RPs~-~eil~~l~~ 373 (375)
T cd05104 343 PSEMYDIMKSCWDADPLKRPTF-KQIVQLIEQ 373 (375)
T ss_pred CHHHHHHHHHHccCChhHCcCH-HHHHHHHHh
Confidence 5679999999999999999999 889888875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=332.85 Aligned_cols=231 Identities=23% Similarity=0.358 Sum_probs=189.8
Q ss_pred hcccCCccccceeeccCceEEEEEEEC-C-eEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEecee-----cC-
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR-H-MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC-----PE- 594 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~-----~~- 594 (855)
.....++.+.+.|.+|||+.||.+... + ..||+|++-..+......+.+||++|++|. |||||.|++.. .+
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 445567788899999999999999886 3 789999998777777888999999999997 99999999943 11
Q ss_pred ---ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 595 ---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 595 ---~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
..+|.||||.||.|-|++..+... .|++..+++|+.++|+|+.+||.+.| +|||||||-+||||+.+|+.|||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~p-PiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKP-PIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCC-ccchhhhhhhheEEcCCCCEEeCcc
Confidence 356899999999999999654443 39999999999999999999999875 8999999999999999999999999
Q ss_pred c-------------------------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003033 672 E-------------------------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 714 (855)
Q Consensus 672 g-------------------------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~ 714 (855)
| +..+..++.|+|||+|||+||-|+....||+..... ++..
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aIln 268 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AILN 268 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eEEe
Confidence 7 234456788999999999999999999999754322 1222
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+++. .+++ ..++..|.+||..||+.||.+||++ -+|+..+..+.
T Consensus 269 g~Y~------~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI-~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 269 GNYS------FPPF-PNYSDRLKDLIRTMLQPNPDERPNI-YQVLEEIFELA 312 (738)
T ss_pred cccc------CCCC-ccHHHHHHHHHHHHhccCcccCCCH-HHHHHHHHHHh
Confidence 2221 1111 2577899999999999999999999 56766666663
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=323.59 Aligned_cols=231 Identities=27% Similarity=0.456 Sum_probs=187.8
Q ss_pred ccCCccccceeeccCceEEEEEEECC------eEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEecee--cC
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PE 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~ 594 (855)
...+-...++||+|+||.||+|.++- ..||||..+... .....+|.+|+++|++++|||||++||++ .+
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 33444556899999999999998752 238999988532 22356799999999999999999999998 45
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
.++||||+|+||+|.++|.... ..++..+++.++.++|.||.|||+ +++|||||-..|+|++.++.+||+|||+.
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccc
Confidence 7899999999999999996433 369999999999999999999999 89999999999999999999999999853
Q ss_pred -------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 675 -------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 -------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
..+.|+.++|||||||++||+++ |..||.+....+..... . ........
T Consensus 310 ~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI--~---~~~~r~~~ 384 (474)
T KOG0194|consen 310 RAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI--V---KNGYRMPI 384 (474)
T ss_pred cCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHH--H---hcCccCCC
Confidence 23457899999999999999999 88899776654322111 0 11112233
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|...+..+..++.+||..+|.+||+| .++.+.|+.+..
T Consensus 385 ~~~~p~~~~~~~~~c~~~~p~~R~tm-~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 385 PSKTPKELAKVMKQCWKKDPEDRPTM-STIKKKLEALEK 422 (474)
T ss_pred CCCCHHHHHHHHHHhccCChhhccCH-HHHHHHHHHHHh
Confidence 44567889999999999999999999 889999998754
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=296.40 Aligned_cols=210 Identities=27% Similarity=0.396 Sum_probs=179.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~ 600 (855)
++|+.++.||.|+||.|...+.+ +..+|+|++++...-. .++...|..+|+.+.||++++|++.|.+ .++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888999999999999999876 5779999998764433 3456789999999999999999999854 689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------- 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------- 673 (855)
||++||.|..+|+ ....++......++.||+.||+|||+ ++|++|||||+|||||.+|++||+|||+
T Consensus 124 eyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 9999999999995 34568999999999999999999999 7999999999999999999999999974
Q ss_pred ---------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhhHHHH
Q 003033 674 ---------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 674 ---------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
+.+..|+..+|+|||||++|||+.|.|||...+..... +..++ -.+|...+..+
T Consensus 198 T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~---------v~fP~~fs~~~ 268 (355)
T KOG0616|consen 198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK---------VKFPSYFSSDA 268 (355)
T ss_pred EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc---------ccCCcccCHHH
Confidence 34566888999999999999999999999877764432 22222 24677778899
Q ss_pred HHHHHHhhccCCCCCC
Q 003033 737 ANLAMRCCEMSRKSRP 752 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RP 752 (855)
.+|+.+.++.|-.+|.
T Consensus 269 kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 269 KDLLKKLLQVDLTKRF 284 (355)
T ss_pred HHHHHHHHhhhhHhhh
Confidence 9999999999999884
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=305.19 Aligned_cols=218 Identities=41% Similarity=0.668 Sum_probs=171.5
Q ss_pred ccceeeccCceEEEEEEEC------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 532 PSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
..+.||.|.||.||+|.+. +..|+||.++..... ....|.+|++++.+++||||++++|+|. +..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3567999999999999988 478999999653322 2578999999999999999999999995 457899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.++|... ....+++..+..|+.||+.||.|||+ ++|+|+||+|+|||++.++.+||+|||+..
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999654 24568999999999999999999999 789999999999999999999999997432
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhh
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++||||||+++|||+| |+.||....... ..+..+.. ...|...
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~ 230 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR--------LPIPDNC 230 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------TTSBTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ceeccch
Confidence 2335778999999999999999 788986543322 12222211 1223344
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
+..+.+|+.+||+.+|.+||++ .++++.|
T Consensus 231 ~~~~~~li~~C~~~~p~~RPs~-~~i~~~L 259 (259)
T PF07714_consen 231 PKDIYSLIQQCWSHDPEKRPSF-QEILQEL 259 (259)
T ss_dssp BHHHHHHHHHHT-SSGGGS--H-HHHHHHH
T ss_pred hHHHHHHHHHHcCCChhhCcCH-HHHHhcC
Confidence 5779999999999999999999 7887765
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=306.46 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=173.6
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.|...+.||+|+||.||+|... +..||||.+..... .....+.+|+.+|.+++||||+.+++++. +..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677889999999999999875 68899999875432 22345789999999999999999999884 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 99999999887532 23468999999999999999999999 899999999999999999999999997431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|++|++||....... ..+... +......++...+..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~ 231 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR-----VKEDQEEYSEKFSED 231 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH-----hhcccccCCccCCHH
Confidence 2346788999999999999999999997543211 111110 111112344455678
Q ss_pred HHHHHHHhhccCCCCCCCh
Q 003033 736 LANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~ 754 (855)
+.+|+.+||..||.+||+.
T Consensus 232 ~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 232 AKSICRMLLTKNPKERLGC 250 (285)
T ss_pred HHHHHHHHhhcCHHHhcCC
Confidence 9999999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=309.33 Aligned_cols=211 Identities=26% Similarity=0.358 Sum_probs=174.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+|++++||||+++++++. +..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999886 68899999975322 23456889999999999999999999884 4578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 99999999999853 3468899999999999999999999 899999999999999999999999998532
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|++|++||........ .+..+ ...+|...+..+
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~---------~~~~~~~~~~~~ 225 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG---------KLEFPRHLDLYA 225 (291)
T ss_pred cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---------CcCCCccCCHHH
Confidence 23467789999999999999999999976543321 11111 123444556789
Q ss_pred HHHHHHhhccCCCCCCC
Q 003033 737 ANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs 753 (855)
.+|+.+||..||.+||+
T Consensus 226 ~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 226 KDLIKKLLVVDRTRRLG 242 (291)
T ss_pred HHHHHHHcCCCHHHccC
Confidence 99999999999999997
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=314.71 Aligned_cols=221 Identities=28% Similarity=0.373 Sum_probs=180.7
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC----CC-CChhhHHHHHHHHHhcC-CCcceeEecee--cC
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----SL-QGPSEFQQEIDILSKIR-HPNLVTLVGAC--PE 594 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~----~~-~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~ 594 (855)
....+|...+.||+|+||.||.|... +..||||++... .. ...+.+.+|+.+|+.++ ||||++++.++ ..
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568999999999999999999775 688999987764 12 23456778999999999 99999999998 45
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEF 673 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~ 673 (855)
..++||||+.||+|.+++.. ..++.+.....++.|++.|+.|||+ +||+||||||+|||||.+ +++||+|||+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred eEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 68999999999999999954 4568889999999999999999999 899999999999999999 9999999974
Q ss_pred cc-------------------------cCC-C-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 003033 674 LA-------------------------SGE-L-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 726 (855)
Q Consensus 674 ~~-------------------------~~~-~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~ 726 (855)
.. ... | +.++||||+||+||-|++|+.||...+........ ....-
T Consensus 168 s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki-------~~~~~ 240 (370)
T KOG0583|consen 168 SAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKI-------RKGEF 240 (370)
T ss_pred ccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHH-------hcCCc
Confidence 32 222 4 46899999999999999999999875443322221 11112
Q ss_pred CCChhh-HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 727 DWPFVQ-AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 727 ~~p~~~-~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+|... +.++..|+.+|+..||.+|+++ .+++
T Consensus 241 ~~p~~~~S~~~~~Li~~mL~~~P~~R~t~-~~i~ 273 (370)
T KOG0583|consen 241 KIPSYLLSPEARSLIEKMLVPDPSTRITL-LEIL 273 (370)
T ss_pred cCCCCcCCHHHHHHHHHHcCCCcccCCCH-HHHh
Confidence 334444 7889999999999999999999 6665
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=296.76 Aligned_cols=222 Identities=24% Similarity=0.438 Sum_probs=179.4
Q ss_pred CCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.+|+..+.||+|+||.||++.+.. ..+|+|.+.... .....|.+|+.+|++++||||++++++|. +..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 357778899999999999998864 579999986443 34567899999999999999999999984 46889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++... ...++|..+..++.+++.||.|||+ ++|+||||||+||+++.++.+||+|||+..
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 99999998532 2358999999999999999999999 799999999999999999999999998432
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++||||||+++|+|++ |++||................ ....|...+..+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~ 231 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF------RLYRPKLASMTVY 231 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------CCCCCCCCCHHHH
Confidence 1235678999999999999999 999997655433222111111 1112333456799
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
+|+.+||..+|.+||++ ++++..|
T Consensus 232 ~li~~c~~~~p~~Rps~-~~l~~~l 255 (256)
T cd05114 232 EVMYSCWHEKPEGRPTF-AELLRAI 255 (256)
T ss_pred HHHHHHccCCcccCcCH-HHHHHhh
Confidence 99999999999999999 7787765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=318.05 Aligned_cols=230 Identities=24% Similarity=0.413 Sum_probs=181.5
Q ss_pred cCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec--Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP--EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~ 595 (855)
.++|+..+.||+|+||.||+|...+ ..||||+++..... ....+.+|+.+|+.+ +|||||+++|+|. +.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 3478899999999999999987532 46999999764322 245688999999999 8999999999984 46
Q ss_pred eEEEEEecCCCCHHHHhcccC-----------------------------------------------------------
Q 003033 596 WTLVYEYLPNGSLEDRLSCKD----------------------------------------------------------- 616 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~----------------------------------------------------------- 616 (855)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 889999999999999884321
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 617 --------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 617 --------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
...++++.....|+.||+.||.|||+ ++|+||||||+|||++.++++||+|||+..
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 11358889999999999999999999 799999999999999999999999998531
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++ |++||............ ... ......|...+..+.+|+
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~l~~li 348 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM--VKR---GYQMSRPDFAPPEIYSIM 348 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH--HHc---ccCccCCCCCCHHHHHHH
Confidence 1346778999999999999997 99999654321111110 000 011112333457899999
Q ss_pred HHhhccCCCCCCChHHHHHHHHhhh
Q 003033 741 MRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+||+.||.+||++ .+|++.|+.+
T Consensus 349 ~~cl~~dp~~RPs~-~~l~~~l~~~ 372 (374)
T cd05106 349 KMCWNLEPTERPTF-SQISQLIQRQ 372 (374)
T ss_pred HHHcCCChhhCcCH-HHHHHHHHHH
Confidence 99999999999999 8999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=303.21 Aligned_cols=229 Identities=24% Similarity=0.307 Sum_probs=186.0
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEecee--cCceEE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL 598 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~L 598 (855)
......|+....||.|.-+.||+|+.. +..||||+++-+.... ...+++|+..|+.++|||||+++..| ...+++
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 345568999999999999999999875 6889999998765443 57889999999999999999999988 457899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
||.||.+||+.+++...-. ..+++..+..|+++++.||.|||. +|.||||||+.||||+.+|.+||+|||+.
T Consensus 102 VmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred eehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 9999999999999964332 348999999999999999999999 89999999999999999999999999621
Q ss_pred ---------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC-CCCC
Q 003033 675 ---------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAG 726 (855)
Q Consensus 675 ---------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d-~~~~ 726 (855)
.-..|+.|+|||||||+..||++|..||.........+.. +.+... +...
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~pp~~~t~ 255 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDPPTLLTS 255 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCCCCcccc
Confidence 1234889999999999999999999999876665543322 111111 0111
Q ss_pred CCCh----hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 727 DWPF----VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 727 ~~p~----~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+. .....+..++..||..||.+||++ ++++
T Consensus 256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptA-skLl 291 (516)
T KOG0582|consen 256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTA-SKLL 291 (516)
T ss_pred cCChHHhhhhcHHHHHHHHHHhhcCcccCCCH-HHHh
Confidence 1222 235689999999999999999998 5554
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=311.16 Aligned_cols=226 Identities=26% Similarity=0.331 Sum_probs=179.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|.....||+|+||.||+|... +..||||++..... .....+.+|+.+|..++||||+++++++. +..+|||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999886 57899999975422 23456889999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~ 154 (333)
T cd05600 81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY 154 (333)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccccc
Confidence 99999999999953 3468899999999999999999999 899999999999999999999999998432
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC-CCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d-~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|||++|.+||..................+. +.........+.++.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 234 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234 (333)
T ss_pred cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence 23567899999999999999999999976554332211111111111 111100113457899
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+|+.+||..+|.+||++ .+++.
T Consensus 235 ~li~~~l~~~~~rr~s~-~~ll~ 256 (333)
T cd05600 235 DLITKLINDPSRRFGSL-EDIKN 256 (333)
T ss_pred HHHHHHhhChhhhcCCH-HHHHh
Confidence 99999999999999998 66643
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=315.96 Aligned_cols=214 Identities=26% Similarity=0.469 Sum_probs=177.6
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEecCCCCHHH
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLED 610 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey~~~GsL~~ 610 (855)
+.-||.|+-|.||.|.+++..||||+++.-. ..+|.-|++|+||||+.+.|+|.. .+|||||||+.|-|..
T Consensus 129 LeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 3459999999999999999999999986422 257888999999999999999954 5789999999999999
Q ss_pred HhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc------------------
Q 003033 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE------------------ 672 (855)
Q Consensus 611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg------------------ 672 (855)
.|.. ..+++......|..+||.|+.|||. +.|||||||.-||||..+..+||+|||
T Consensus 202 VLka---~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTV 275 (904)
T KOG4721|consen 202 VLKA---GRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTV 275 (904)
T ss_pred HHhc---cCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhH
Confidence 9953 3457778889999999999999999 789999999999999999999999996
Q ss_pred ------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhcc
Q 003033 673 ------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEM 746 (855)
Q Consensus 673 ------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~ 746 (855)
++...+.+.|+|||||||||||||||.-||...+.....+ |.-.+. +....|..+++-|.-|+..||.-
T Consensus 276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw--GVGsNs---L~LpvPstcP~GfklL~Kqcw~s 350 (904)
T KOG4721|consen 276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW--GVGSNS---LHLPVPSTCPDGFKLLLKQCWNS 350 (904)
T ss_pred hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE--eccCCc---ccccCcccCchHHHHHHHHHHhc
Confidence 4566788999999999999999999999996444322111 111111 22345667778899999999999
Q ss_pred CCCCCCChHHHHHHHHhhh
Q 003033 747 SRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 747 dP~~RPs~~~evl~~L~~~ 765 (855)
.|..||++ .+++.-|+-.
T Consensus 351 KpRNRPSF-rqil~HldIa 368 (904)
T KOG4721|consen 351 KPRNRPSF-RQILLHLDIA 368 (904)
T ss_pred CCCCCccH-HHHHHHHhhc
Confidence 99999999 7787777643
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=312.46 Aligned_cols=212 Identities=22% Similarity=0.326 Sum_probs=175.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.+|...+.||+|+||.||+|... +..||||++.... ......+.+|+.+|.+++||||+++++++. +..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888899999999999999886 5789999997542 223456889999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 99999999999853 3458889999999999999999999 899999999999999999999999998532
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|+||++||......... +..+. ..+|...+..+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~---------~~~p~~~~~~~ 242 (329)
T PTZ00263 172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR---------LKFPNWFDGRA 242 (329)
T ss_pred cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC---------cCCCCCCCHHH
Confidence 234678899999999999999999999765443221 11111 12343455778
Q ss_pred HHHHHHhhccCCCCCCCh
Q 003033 737 ANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~ 754 (855)
.+|+.+||..||.+||+.
T Consensus 243 ~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 243 RDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred HHHHHHHhhcCHHHcCCC
Confidence 999999999999999973
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=337.28 Aligned_cols=228 Identities=30% Similarity=0.488 Sum_probs=190.3
Q ss_pred CccccceeeccCceEEEEEEECC-------eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
+......||+|+||.||.|.+.+ ..||||.+.... .+...+|.+|..+|++++|||||+++|+|. ...+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 44556789999999999998763 349999998763 345678999999999999999999999994 45789
Q ss_pred EEEecCCCCHHHHhcccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 599 VYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
++|||.+|+|..+|..... ...|+....+.++.+||+|+.||++ +++|||||...|+||+....+||+|||++
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence 9999999999999964311 4568999999999999999999999 78999999999999999999999999743
Q ss_pred ---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH---HHhhcccccccCC
Q 003033 675 ---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY---ALDTGKLKNLLDP 723 (855)
Q Consensus 675 ---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~---~~~~~~~~~~~d~ 723 (855)
..+.+|.|+|||||||+|||++| |..||+..+..+- .+..|
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-------- 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-------- 921 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC--------
Confidence 34678999999999999999999 8999986654432 22222
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
+-+.|..++..+.+|+..||..+|.+||++ ..+++.+..+....
T Consensus 922 -RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F-~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 922 -RLDPPSYCPEKLYQLMLQCWKHDPEDRPSF-RTIVEQDPAISNAA 965 (1025)
T ss_pred -ccCCCCCCChHHHHHHHHHccCChhhCccH-HHHHhhhhhhhhhh
Confidence 224566778999999999999999999999 67888777775543
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=301.65 Aligned_cols=227 Identities=26% Similarity=0.390 Sum_probs=173.6
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
..++|...++||+|+||.||+|... +..||||++...... ....+.+|+.+++.++||||+++++++. +..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 3468999999999999999999885 578999999754322 2346789999999999999999999883 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||++ |+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 83 e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 83 EYVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred ECCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 9995 688887743 23458889999999999999999999 899999999999999999999999998431
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-----cccc-----c-----
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-----GKLK-----N----- 719 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-----~~~~-----~----- 719 (855)
...++.++|||||||++|+|+||.+||.........+.. +... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 123567899999999999999999999765433221111 0000 0
Q ss_pred ccCCC------C----CCCCh-hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 LLDPL------A----GDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ~~d~~------~----~~~p~-~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+. . ..|+. ..+..+.+|+.+||+.||.+|||+ .+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~-~~~l 286 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA-QAAL 286 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCH-HHHh
Confidence 00000 0 00000 123568899999999999999998 5553
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=311.23 Aligned_cols=206 Identities=22% Similarity=0.256 Sum_probs=168.1
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||++... +..||||++..... .....+.+|+.+|.+++||||+++++++. +..+|||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 6999999999999875 57899999975422 22346788999999999999999999884 46889999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------ 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------ 675 (855)
|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 82 LFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 9999853 3468999999999999999999999 799999999999999999999999998532
Q ss_pred -------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 676 -------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 676 -------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
...++.++|||||||++|||+||++||...+........ ......+|...+..+.+|+.+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~p~~~~~~~~~li~~ 228 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI-------LMEEIRFPRTLSPEAKSLLAG 228 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH-------HcCCCCCCCCCCHHHHHHHHH
Confidence 234677899999999999999999999655432211111 001123444566789999999
Q ss_pred hhccCCCCCCC
Q 003033 743 CCEMSRKSRPE 753 (855)
Q Consensus 743 Cl~~dP~~RPs 753 (855)
||+.||.+||+
T Consensus 229 ~L~~dP~~R~~ 239 (323)
T cd05571 229 LLKKDPKQRLG 239 (323)
T ss_pred HccCCHHHcCC
Confidence 99999999994
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=294.50 Aligned_cols=222 Identities=27% Similarity=0.369 Sum_probs=178.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEecee----cCceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~----~~~~~LV 599 (855)
+.|+.+++|++|+||.||+|+.+ +..||+|.++..... ..-.-++||.+|.+++|||||.+-.+. -+..|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 46888999999999999999886 578999999876422 234568999999999999999986654 4579999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
||||+. +|..++.. ...++......-+..|++.||.|||. +.|+||||||+|+|+.+.|.+||+|||++
T Consensus 156 Me~~Eh-DLksl~d~--m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMET--MKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999975 88888853 23578888999999999999999999 89999999999999999999999999843
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC----
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP---- 729 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p---- 729 (855)
....|++..|+||+|||+.||++++|.|.+..+..+.-.. +..+-.|....||
T Consensus 230 p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I--f~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 230 PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI--FKLLGTPSEAIWPGYSE 307 (419)
T ss_pred CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH--HHHhCCCccccCCCccc
Confidence 3456889999999999999999999999988776654332 1111112222222
Q ss_pred ----------------------hh-hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 730 ----------------------FV-QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 730 ----------------------~~-~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.. .++.-.+|+..++.+||++|-|+ ++.
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA-~~~ 358 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA-EDG 358 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH-HHh
Confidence 11 33677899999999999999998 443
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=298.36 Aligned_cols=226 Identities=25% Similarity=0.434 Sum_probs=180.2
Q ss_pred ccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
.+++|+....||+|+||.||+|.+.+ ..||||.+..... .....|.+|+.+++.++||||++++++|. ..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45679999999999999999997643 5699999865322 22456889999999999999999999985 45
Q ss_pred eEEEEEecCCCCHHHHhcccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEE
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDN-------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL 668 (855)
.++||||+++|+|.+++..... ...+++..+..++.+++.||.|||+ .+++||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 7899999999999999854221 2346888999999999999999999 79999999999999999999999
Q ss_pred eeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHH--Hhhcccc
Q 003033 669 SDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGKLK 718 (855)
Q Consensus 669 ~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~--~~~~~~~ 718 (855)
+|||+.. .+.++.++|||||||++|||++ |.+||......... ...+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~- 239 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL- 239 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 9998531 1345778999999999999999 78898655432211 111111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
...+...+..+.+++.+||+.+|.+||++ .+++..|+
T Consensus 240 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~e~l~~l~ 276 (277)
T cd05062 240 -------LDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIK 276 (277)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHhh
Confidence 12233445779999999999999999999 78887775
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=299.61 Aligned_cols=225 Identities=26% Similarity=0.350 Sum_probs=173.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
.+|...++||.|+||.||+|... +..||+|+++.... .....+.+|+.++++++||||+++++++. +..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999876 57899999975432 23456789999999999999999999884 357899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++ |+|.+++... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LD-SDLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CC-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 97 5899888532 3457889999999999999999999 899999999999999999999999998431
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----c--------------ccc
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G--------------KLK 718 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~--------------~~~ 718 (855)
...++.++|||||||++|+|+||++||............ + .+.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 134677899999999999999999999754432211100 0 000
Q ss_pred cccCCC-C-CC---CChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 NLLDPL-A-GD---WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ~~~d~~-~-~~---~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+. . .. .....+.++.+|+.+||..||.+|||+ ++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~-~~~l 283 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISA-EAAL 283 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCH-HHHh
Confidence 000000 0 00 001234678999999999999999999 6664
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=294.66 Aligned_cols=226 Identities=26% Similarity=0.462 Sum_probs=183.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.+|...++||+|+||.||+|.+. ++.||+|.+.... .....|.+|+.++..++||||++++++|. +..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35777889999999999999875 5789999987542 34567999999999999999999999984 4678999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.... ...+++..+..++.|++.||.|||. ++++||||||+|||++.++.+||+|||+..
T Consensus 85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 9999999985432 3458999999999999999999998 799999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|||++ |.+||............ . .......|...+..+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~ 234 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---E---KGYRMERPEGCPPKV 234 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---H---CCCCCCCCCCCCHHH
Confidence 2345678999999999999998 99999654432211111 0 011123344456789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+++.+||..+|.+||++ .++++.|+.+
T Consensus 235 ~~li~~cl~~~p~~Rp~~-~~l~~~l~~~ 262 (263)
T cd05052 235 YELMRACWQWNPSDRPSF-AEIHQAFETM 262 (263)
T ss_pred HHHHHHHccCCcccCCCH-HHHHHHHHhh
Confidence 999999999999999999 8899888864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=296.83 Aligned_cols=228 Identities=26% Similarity=0.487 Sum_probs=186.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
...+|...++||.|+||.||+|... +..||+|.+..........+..|+.+++.++||||+++++++. +..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3456888899999999999999886 4789999998766555678999999999999999999999884 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.... ...+++..+..++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 84 MEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999996432 3468999999999999999999999 799999999999999999999999997531
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|++ |+.||............. .......+...+..+
T Consensus 160 ~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 233 (261)
T cd05148 160 LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT------AGYRMPCPAKCPQEI 233 (261)
T ss_pred cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH------hCCcCCCCCCCCHHH
Confidence 2345678999999999999998 899996544322111110 111112234556789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
.+++.+||..||.+||++ .++++.|+.
T Consensus 234 ~~~i~~~l~~~p~~Rpt~-~~l~~~L~~ 260 (261)
T cd05148 234 YKIMLECWAAEPEDRPSF-KALREELDN 260 (261)
T ss_pred HHHHHHHcCCCchhCcCH-HHHHHHHhc
Confidence 999999999999999999 889888875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=294.59 Aligned_cols=223 Identities=25% Similarity=0.447 Sum_probs=179.2
Q ss_pred CCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.+|.....||+|+||.||+|.+.+ ..||||.+.... .....|.+|+.++.+++||||++++++|. +..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 357778899999999999998775 469999987543 34567999999999999999999999984 35789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++... ...+++..+..++.+|+.||.|||+ .+|+|+||||+|||++.++.+||+|||...
T Consensus 83 ~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 83 NGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999998532 2368999999999999999999999 799999999999999999999999997421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|+| |..||.............. ......+...+..+.
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 231 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ------GLRLYRPHLASEKVY 231 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc------CCCCCCCCCCCHHHH
Confidence 1345778999999999999999 9999975543221111100 011112333457899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
+++.+||..+|.+||++ .+++..|+
T Consensus 232 ~li~~cl~~~p~~Rp~~-~~ll~~~~ 256 (256)
T cd05113 232 AIMYSCWHEKAEERPTF-QQLLSSIE 256 (256)
T ss_pred HHHHHHcCCCcccCCCH-HHHHHhhC
Confidence 99999999999999999 77876653
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=299.61 Aligned_cols=225 Identities=24% Similarity=0.311 Sum_probs=174.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|...+.||+|+||.||+|..+ +..||||++..... .....+.+|+.++..++||||++++++|. +..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888999999999999999986 47899999875432 23456889999999999999999999884 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|++++.|..+.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 999887765542 23468999999999999999999999 799999999999999999999999997431
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc-----------------
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK----------------- 718 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~----------------- 718 (855)
+..++.++|||||||++|+|++|++||................
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 2346778999999999999999999997654332221110000
Q ss_pred -cccCCC-------CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 -NLLDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 -~~~d~~-------~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+. ...+....+..+.+|+.+||+.||.+||++ ++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~-~~~l 282 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT-EQCL 282 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH-HHHh
Confidence 000000 001111245679999999999999999999 6664
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=315.49 Aligned_cols=229 Identities=24% Similarity=0.397 Sum_probs=182.4
Q ss_pred cccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcC-CCcceeEeceec--
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP-- 593 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~-- 593 (855)
...+.|.+.++||+|+||.||+|...+ ..||||++...... ....|.+|+.+|.++. |||||+++|+|.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 345678889999999999999998642 36999999764322 2457899999999996 999999999995
Q ss_pred CceEEEEEecCCCCHHHHhcccC---------------------------------------------------------
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKD--------------------------------------------------------- 616 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 616 (855)
+..+||||||++|+|.++|....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 46899999999999999885321
Q ss_pred ------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 617 ------------------------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 617 ------------------------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
....+++..+..++.||+.||.|||+ ++|+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEE
Confidence 01358899999999999999999999 799999999999999
Q ss_pred CCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH---
Q 003033 661 DANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--- 709 (855)
Q Consensus 661 d~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--- 709 (855)
+.++.+||+|||+.. ...++.++|||||||++|+|++ |..||.......
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 999999999997421 2345778999999999999997 889986432211
Q ss_pred HHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 710 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 710 ~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
..+..+ .....+...+..+.+|+.+||..+|.+||++ .+|.+.|+.+
T Consensus 351 ~~~~~~--------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-~~l~~~l~~l 397 (400)
T cd05105 351 NKIKSG--------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSF-LHLSDIVESL 397 (400)
T ss_pred HHHhcC--------CCCCCCccCCHHHHHHHHHHCccCHhHCcCH-HHHHHHHHHH
Confidence 111111 1112233455789999999999999999999 8899998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=298.19 Aligned_cols=232 Identities=27% Similarity=0.408 Sum_probs=180.0
Q ss_pred CCccccceeeccCceEEEEEEEC------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec----CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~ 597 (855)
.+|.....||+|+||.||++.+. +..||||.+..........|.+|+.+|.+++||||+++++++. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46788899999999999998753 4689999987655444567899999999999999999999862 2578
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 999999999999998532 2458999999999999999999999 799999999999999999999999997422
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhcc--------cccc
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGK--------LKNL 720 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-~~~~~~~~--------~~~~ 720 (855)
...++.++|||||||++|||++|..|+...... ........ +...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence 134567899999999999999987765432211 10000000 0000
Q ss_pred cC-CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 721 LD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 721 ~d-~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+. ......+...+..+.+|+.+||..+|.+||++ .+|+..|+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSF-SELALQVEAI 283 (284)
T ss_pred HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHhc
Confidence 00 01111122345789999999999999999999 8899988865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=298.35 Aligned_cols=225 Identities=28% Similarity=0.497 Sum_probs=181.4
Q ss_pred CCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
.+|...+.||+|+||.||+|...+ ..||+|.+...... ....|.+|+.++.+++||||+++++++. +..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 367788899999999999998653 46999998754322 2456889999999999999999999984 3578
Q ss_pred EEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC
Q 003033 598 LVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 664 (855)
++|||+++|+|.+++..... ...+++.....++.|++.||.|||. ++|+||||||+|||++.++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence 99999999999999854211 1458899999999999999999999 7999999999999999999
Q ss_pred cEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhh
Q 003033 665 VSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDT 714 (855)
Q Consensus 665 ~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~ 714 (855)
.+||+|||+.. .+.++.++|||||||++|||++ |..||........ .+..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS 241 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999998431 2345778999999999999998 9999865443221 1111
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+. ....|...+..+.+|+.+||+.||.+||++ ++|++.|+.
T Consensus 242 ~~--------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~-~~i~~~l~~ 282 (283)
T cd05048 242 RQ--------LLPCPEDCPARVYALMIECWNEIPARRPRF-KDIHTRLRS 282 (283)
T ss_pred CC--------cCCCcccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHhc
Confidence 11 112344556889999999999999999999 889888864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=294.08 Aligned_cols=226 Identities=27% Similarity=0.432 Sum_probs=181.5
Q ss_pred CCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
++|.....||+|+||.||+|.+. ...||||.++..... ....|.+|+.++.+++||||+++++++. +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888899999999999999875 247999998764322 2457889999999999999999999884 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 9999999999998532 2368999999999999999999999 899999999999999999999999997421
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++||||||+++|+|++ |..||.............. ......+..
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~ 232 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED------GYRLPPPMD 232 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc------CCCCCCCCC
Confidence 1335678999999999999998 9999864432221111110 011122334
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+..+.+|+.+||+.+|.+||++ .+|++.|+.+
T Consensus 233 ~~~~l~~li~~cl~~~p~~Rp~~-~ei~~~l~~~ 265 (266)
T cd05033 233 CPSALYQLMLDCWQKDRNERPTF-SQIVSTLDKM 265 (266)
T ss_pred CCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence 45789999999999999999999 8899988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=293.83 Aligned_cols=224 Identities=25% Similarity=0.456 Sum_probs=181.3
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.++|+..++||+|+||.||+|... +..||+|.+.... ...+.|.+|+.++++++||||+++++.+. +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 356888999999999999999876 4679999987543 24568999999999999999999999874 4678999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++... ....+++..+..++.+++.||.|||. .+++||||||+|||++.++.+||+|||+..
T Consensus 84 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 84 AKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 999999998543 23468899999999999999999999 789999999999999999999999997431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
.+.++.++|||||||++|+|+| |.+||....... ..+..+. ..+. +...+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----~~~~----~~~~~~ 231 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY----RMPR----MENCPD 231 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC----CCCC----CCCCCH
Confidence 1334668999999999999998 999996543322 1111111 0111 123456
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
.+.+|+.+||..+|.+||++ +++.+.|+.
T Consensus 232 ~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~ 260 (261)
T cd05072 232 ELYDIMKTCWKEKAEERPTF-DYLQSVLDD 260 (261)
T ss_pred HHHHHHHHHccCCcccCcCH-HHHHHHHhc
Confidence 79999999999999999999 899998875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=306.04 Aligned_cols=227 Identities=21% Similarity=0.330 Sum_probs=176.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.++|+....||+|+||.||++... +..||+|.+..... .....|.+|+++|.+++||||+++++++. +..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467999999999999999999886 57799999876422 12456899999999999999999999883 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
|+++|+|.+++.. ...+++..+..++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||+.
T Consensus 84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 9999999999853 23588999999999999999999973 36999999999999999999999999743
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--Hhhcccc------------------
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLK------------------ 718 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~------------------ 718 (855)
.+..++.++|||||||++|+|+||+.||......... +......
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGR 238 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccc
Confidence 2234678999999999999999999999644332211 1100000
Q ss_pred --------------------cccCCCCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 --------------------NLLDPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 --------------------~~~d~~~~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.......++ ...+.++.+|+.+||..||++||++ ++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~-~ell 299 (331)
T cd06649 239 PVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADL-KMLM 299 (331)
T ss_pred cccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCH-HHHh
Confidence 00000001111 1245679999999999999999999 6664
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=293.37 Aligned_cols=226 Identities=23% Similarity=0.387 Sum_probs=179.1
Q ss_pred ccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC--------
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 594 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------- 594 (855)
|.+.+.||+|+||.||+|.+.. ..||||.++..... ....|.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567789999999999998642 56999999764332 23578999999999999999999998721
Q ss_pred ceEEEEEecCCCCHHHHhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKD---NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
..++||||+++|+|..++.... ....+++.....++.|++.||.|||+ ++|+||||||+|||+++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 2689999999999999884321 22468999999999999999999999 79999999999999999999999999
Q ss_pred cccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCC
Q 003033 672 EFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDP 723 (855)
Q Consensus 672 g~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~ 723 (855)
|+.. ...++.++|||||||++|||++ |.+||............ ...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~------~~~ 231 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL------RHG 231 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH------HcC
Confidence 8532 1335678999999999999999 89999655433221111 011
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.....|...+..+.+++.+||..||.+||++ .++++.|+.+
T Consensus 232 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~e~~~~l~~~ 272 (273)
T cd05035 232 NRLKQPEDCLDELYDLMYSCWRADPKDRPTF-TKLREVLENI 272 (273)
T ss_pred CCCCCCcCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence 1112233456789999999999999999999 8898888764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=292.16 Aligned_cols=227 Identities=27% Similarity=0.473 Sum_probs=183.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
...+|...+.||+|+||.||+|... +..||||.++... .....|.+|+.++++++||||+++++++. +..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 3456888899999999999999875 4679999987643 24567999999999999999999999884 457899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.... ...+++..+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999985432 3468999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|+| |++||.............. .. ....+...+..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~ 232 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ--GY----RMPCPPGCPKE 232 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CC----CCCCCCcCCHH
Confidence 1234668999999999999999 9999975443321111111 00 01122334578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.+++.+||..+|.+||++ +++...|+.
T Consensus 233 ~~~li~~~l~~~P~~Rp~~-~~l~~~l~~ 260 (261)
T cd05068 233 LYDIMLDCWKEDPDDRPTF-ETLQWKLED 260 (261)
T ss_pred HHHHHHHHhhcCcccCCCH-HHHHHHHhc
Confidence 9999999999999999999 889888875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=294.55 Aligned_cols=223 Identities=26% Similarity=0.413 Sum_probs=175.6
Q ss_pred cccceeeccCceEEEEEEECC----eEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--------Cce
Q 003033 531 DPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--------EVW 596 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~~~ 596 (855)
.+.+.||+|+||.||+|.+.. ..||+|.++.... .....|.+|+.++..++||||++++++|. ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999998763 3699999875432 22456889999999999999999999862 135
Q ss_pred EEEEEecCCCCHHHHhccc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 597 TLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~---~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
++||||+++|+|.+++... .....+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence 7999999999999887321 123458999999999999999999999 7999999999999999999999999985
Q ss_pred cc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCC
Q 003033 674 LA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDP 723 (855)
Q Consensus 674 ~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~ 723 (855)
.. ...++.++|||||||++|+|++ |++||....... ..+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 232 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR------ 232 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC------
Confidence 32 1225678999999999999999 899996543322 11222111
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+...+..+.+++.+||+.||.+||++ +++++.|+.+
T Consensus 233 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~l~~~l~~~ 271 (272)
T cd05075 233 --LKQPPDCLDGLYSLMSSCWLLNPKDRPSF-ETLRCELEKA 271 (272)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence 01122345679999999999999999999 8898888753
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=291.54 Aligned_cols=215 Identities=24% Similarity=0.447 Sum_probs=174.9
Q ss_pred eeeccCceEEEEEEEC----CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||+|.++ +..||+|++...... ....|.+|+.++..++||||++++|++. +.+++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 5899999999999763 477999998754322 2457889999999999999999999984 46789999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------ 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------ 675 (855)
|.+++.. ...+++.....++.|++.||.|||. ++|+||||||.|||++.++.+||+|||+..
T Consensus 82 L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 82 LNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 9999853 2458999999999999999999999 799999999999999999999999997431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|||+| |.+||....... ..+..+. ....|...+..+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~l 227 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE--------RMECPQRCPPEM 227 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC--------CCCCCCCCCHHH
Confidence 1234568999999999999998 999997543322 2222211 122344556789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
.+|+.+||..||.+||++ +.|.+.|+.
T Consensus 228 ~~li~~~~~~~p~~Rp~~-~~i~~~l~~ 254 (257)
T cd05116 228 YDLMKLCWTYGVDERPGF-AVVELRLRN 254 (257)
T ss_pred HHHHHHHhccCchhCcCH-HHHHHHHhc
Confidence 999999999999999999 788887764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=312.43 Aligned_cols=219 Identities=26% Similarity=0.386 Sum_probs=182.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
.|....+||+|+.|.||.+... +..||||.+........+-+..|+.+|+..+|+|||.++..| .+.+++|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 4566678999999999999765 477999999887666667788999999999999999999987 567899999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
||+|.|.+.. ..+++.++..|+.+++.||.|||. ++|||||||.+||||+.+|.+||+|||++
T Consensus 354 ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR 426 (550)
T KOG0578|consen 354 GGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR 426 (550)
T ss_pred CCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence 9999998842 348999999999999999999999 89999999999999999999999999853
Q ss_pred ---------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 675 ---------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 675 ---------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
....|++|.|||||||+++||+-|.|||-..+..+.......- . ......|...+..|.++
T Consensus 427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n---g-~P~lk~~~klS~~~kdF 502 (550)
T KOG0578|consen 427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---G-TPKLKNPEKLSPELKDF 502 (550)
T ss_pred ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc---C-CCCcCCccccCHHHHHH
Confidence 2346899999999999999999999999655544332221100 0 11123455677899999
Q ss_pred HHHhhccCCCCCCChHHHHH
Q 003033 740 AMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+||+.|+.+||++ .++|
T Consensus 503 L~~cL~~dv~~RasA-~eLL 521 (550)
T KOG0578|consen 503 LDRCLVVDVEQRASA-KELL 521 (550)
T ss_pred HHHHhhcchhcCCCH-HHHh
Confidence 999999999999999 6664
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=311.60 Aligned_cols=213 Identities=28% Similarity=0.390 Sum_probs=179.5
Q ss_pred CCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|.....||+|+||.||||+-+. ..||||.+.+.... ..+.+.+|++|++.|+|||||.++++|. ..+++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 467777889999999999997664 67999999876433 3456889999999999999999999995 46899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-------- 673 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-------- 673 (855)
|+.| +|..+|.. ...|++.....|+.++..||.|||+ ++|+|||+||.||||+..|++|+||||+
T Consensus 82 ~a~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred hhhh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9966 99999953 3569999999999999999999999 8999999999999999999999999974
Q ss_pred -----------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 674 -----------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 674 -----------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...+.|+..+|.||+|||+|||++|+|||....-.+. + ..+-.....||...+..+
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L-v------~~I~~d~v~~p~~~S~~f 227 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL-V------KSILKDPVKPPSTASSSF 227 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH-H------HHHhcCCCCCcccccHHH
Confidence 3456788899999999999999999999954332221 1 111122345788888999
Q ss_pred HHHHHHhhccCCCCCCCh
Q 003033 737 ANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~ 754 (855)
.+++...|..||.+|-+-
T Consensus 228 ~nfl~gLL~kdP~~RltW 245 (808)
T KOG0597|consen 228 VNFLQGLLIKDPAQRLTW 245 (808)
T ss_pred HHHHHHHhhcChhhcccH
Confidence 999999999999999987
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=297.34 Aligned_cols=225 Identities=28% Similarity=0.436 Sum_probs=179.1
Q ss_pred CCccccceeeccCceEEEEEEEC------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.+|+..+.||+|+||.||+|.+. +..||+|.+...... ....|.+|+.++++++||||+++++++. +..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 35777889999999999999752 367999999754322 2356889999999999999999999874 46789
Q ss_pred EEEecCCCCHHHHhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC
Q 003033 599 VYEYLPNGSLEDRLSCKDN--------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~--------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 664 (855)
||||+++|+|.+++..... ...+++.....++.+++.||.|||+ ++|+||||||+|||++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence 9999999999999842211 2358899999999999999999999 7999999999999999999
Q ss_pred cEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhh
Q 003033 665 VSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDT 714 (855)
Q Consensus 665 ~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~--~~~~~~ 714 (855)
.+||+|||+.. .+.++.++|||||||++|||++ |.+||...... ...+..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 241 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK 241 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999998542 1345778999999999999998 99999654332 122221
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.. ...+...+..+.+++.+||..||.+||++ .+|++.|..
T Consensus 242 ~~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~i~~~l~~ 282 (283)
T cd05090 242 RQL--------LPCSEDCPPRMYSLMTECWQEGPSRRPRF-KDIHTRLRS 282 (283)
T ss_pred CCc--------CCCCCCCCHHHHHHHHHHcccCcccCcCH-HHHHHHhhc
Confidence 111 12333455789999999999999999999 778877753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=285.74 Aligned_cols=220 Identities=25% Similarity=0.416 Sum_probs=181.1
Q ss_pred cCCccccceeeccCceEEEEEEECC--eEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV 599 (855)
.++|+..+.||+|-||.||.|+.+. ..||+|++.+... +-..++.+|++|-+.|+||||+++||+|.+ ..||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 4578999999999999999998873 6799999976532 234678999999999999999999999954 68999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc------
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------ 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------ 673 (855)
+||.++|+|...|... ....++......++.|+|.||.|+|. ++||||||||+|+|++..+.+||+|||.
T Consensus 101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 9999999999999632 33457778888899999999999999 7899999999999999999999999973
Q ss_pred -----------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 674 -----------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 674 -----------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
..+..++..+|+|++||+.||++.|.|||.....-.......+. ...+|...+...
T Consensus 177 ~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~-------~~~~p~~is~~a 249 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV-------DLKFPSTISGGA 249 (281)
T ss_pred CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc-------cccCCcccChhH
Confidence 23455778899999999999999999999755432222222111 123455667889
Q ss_pred HHHHHHhhccCCCCCCChHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+|+.+|+..+|.+|..+ .++
T Consensus 250 ~dlI~~ll~~~p~~r~~l-~~v 270 (281)
T KOG0580|consen 250 ADLISRLLVKNPIERLAL-TEV 270 (281)
T ss_pred HHHHHHHhccCccccccH-HHH
Confidence 999999999999999998 444
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=290.64 Aligned_cols=222 Identities=27% Similarity=0.468 Sum_probs=182.1
Q ss_pred CCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec---CceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV~Ey~~ 604 (855)
.+|...+.||+|+||.||+|...+..||+|.+.... ..+.|.+|+.++++++||||+++++++. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 467888899999999999999999999999986432 3467899999999999999999999752 35789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++.... ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 159 (256)
T cd05082 84 KGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159 (256)
T ss_pred CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCCCC
Confidence 999999986432 3458999999999999999999999 799999999999999999999999997432
Q ss_pred -------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 -------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 -------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|+|++ |++||........ .+..+ .....+...+..+.++
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l 231 (256)
T cd05082 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--------YKMDAPDGCPPVVYDV 231 (256)
T ss_pred ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCCHHHHHH
Confidence 2346778999999999999998 9999865433221 11111 1112233455789999
Q ss_pred HHHhhccCCCCCCChHHHHHHHHhh
Q 003033 740 AMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.+||..+|.+||++ .++++.|+.
T Consensus 232 i~~~l~~~p~~Rpt~-~~l~~~l~~ 255 (256)
T cd05082 232 MKQCWHLDAATRPSF-LQLREQLEH 255 (256)
T ss_pred HHHHhcCChhhCcCH-HHHHHHHhc
Confidence 999999999999999 888888774
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=296.95 Aligned_cols=223 Identities=27% Similarity=0.408 Sum_probs=171.0
Q ss_pred CccccceeeccCceEEEEEEEC---CeEEEEEEecCCCCC--ChhhHHHHHHHHHhc---CCCcceeEeceec-------
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI---RHPNLVTLVGACP------- 593 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~------- 593 (855)
+|.....||+|+||.||+|... +..||||.++..... ....+.+|+.+++.+ +||||++++++|.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6888899999999999999873 467999998754322 234577888888776 6999999999873
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..+++||||++ |+|.+++... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 24789999996 6899988543 23458999999999999999999999 8999999999999999999999999974
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.. ...++.++|||||||++|||++|++||............-.... .+....||
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~--~~~~~~~~ 234 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG--LPGEEDWP 234 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC--CCChhhch
Confidence 31 23467789999999999999999999976554332211100000 00000111
Q ss_pred ----------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 ----------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ----------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||+.||++||++ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-~~~l 285 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA-YSAL 285 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCH-HHHh
Confidence 1234567899999999999999999 5554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=302.32 Aligned_cols=219 Identities=29% Similarity=0.414 Sum_probs=173.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--------------ChhhHHHHHHHHHhcCCCcceeEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------GPSEFQQEIDILSKIRHPNLVTLV 589 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------------~~~~f~~Ei~iL~~l~HpnIV~l~ 589 (855)
..+.|.+...||+|.||.|-+|+.. ++.||||++.+.... ..+..++||.||++|+|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3467899999999999999999775 688999999764211 124688999999999999999999
Q ss_pred ceec----CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc
Q 003033 590 GACP----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 590 g~~~----~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
.+.. +.+|||+|||..|.+...= ...+.|+..+.+.|+.++..||.|||. ++||||||||+|+||+.+|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence 9873 4689999999999875432 233339999999999999999999999 89999999999999999999
Q ss_pred EEEeeccccc------------------------------cC----CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH
Q 003033 666 SKLSDFEFLA------------------------------SG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA 711 (855)
Q Consensus 666 ~KL~DFg~~~------------------------------~~----~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~ 711 (855)
+||+|||+.. ++ ..+.+.||||+||+||-|+.|+.||-........
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 9999997422 10 1245789999999999999999999765544322
Q ss_pred HhhcccccccCCCCCCCCh--hhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 712 LDTGKLKNLLDPLAGDWPF--VQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 712 ~~~~~~~~~~d~~~~~~p~--~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
-++ .. +++. +|. +..+.+.+|+.++|+.||.+|.++ .+|
T Consensus 329 ~KI--vn---~pL~--fP~~pe~~e~~kDli~~lL~KdP~~Ri~l-~~i 369 (576)
T KOG0585|consen 329 DKI--VN---DPLE--FPENPEINEDLKDLIKRLLEKDPEQRITL-PDI 369 (576)
T ss_pred HHH--hc---Cccc--CCCcccccHHHHHHHHHHhhcChhheeeh-hhh
Confidence 221 11 1221 222 456889999999999999999998 444
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=305.56 Aligned_cols=206 Identities=23% Similarity=0.275 Sum_probs=168.1
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||+|+||.||+|... +..||+|++.... ......+.+|+.+|.+++||||++++++|. +..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999886 5789999987532 223456889999999999999999999884 468899999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQR---EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 999853 3458999999999999999999999 899999999999999999999999998532
Q ss_pred ------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHh
Q 003033 676 ------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743 (855)
Q Consensus 676 ------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~C 743 (855)
...++.++|||||||++|+|+||++||............ .. ....+|...+..+.+|+.+|
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~li~~~ 227 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI--LQ-----EPLRFPDGFDRDAKDLLIGL 227 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH--Hc-----CCCCCCCcCCHHHHHHHHHH
Confidence 223577899999999999999999999755433211111 00 11134445567899999999
Q ss_pred hccCCCCCCCh
Q 003033 744 CEMSRKSRPEL 754 (855)
Q Consensus 744 l~~dP~~RPs~ 754 (855)
|..||.+||++
T Consensus 228 L~~dp~~R~~~ 238 (312)
T cd05585 228 LSRDPTRRLGY 238 (312)
T ss_pred cCCCHHHcCCC
Confidence 99999999975
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=288.64 Aligned_cols=226 Identities=27% Similarity=0.475 Sum_probs=185.2
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
..+|.....||.|+||.||+|...+..||||.+..... ..+.+.+|+.++..++||||+++++++. +..++||||++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 35688889999999999999999999999999976543 4678999999999999999999999884 46889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
+|+|.+++.... ...+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||+.
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~ 159 (256)
T cd05039 84 KGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSG 159 (256)
T ss_pred CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccccC
Confidence 999999985432 2368999999999999999999999 89999999999999999999999999732
Q ss_pred ------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 675 ------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 675 ------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
..+.++.++||||||+++|+|++ |..||.............. ......|...+..+.+++.
T Consensus 160 ~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~ 233 (256)
T cd05039 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK------GYRMEAPEGCPPEVYKVMK 233 (256)
T ss_pred CCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc------CCCCCCccCCCHHHHHHHH
Confidence 12446678999999999999997 9999975543221111100 0011123334578999999
Q ss_pred HhhccCCCCCCChHHHHHHHHhh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+||..+|.+||++ .+++..|+.
T Consensus 234 ~~l~~~p~~Rp~~-~~l~~~l~~ 255 (256)
T cd05039 234 DCWELDPAKRPTF-KQLREQLAL 255 (256)
T ss_pred HHhccChhhCcCH-HHHHHHHhc
Confidence 9999999999999 889888864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=304.26 Aligned_cols=222 Identities=25% Similarity=0.396 Sum_probs=170.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec-------CceE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP-------EVWT 597 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------~~~~ 597 (855)
+|...++||+|+||.||+|... +..||||.+.... ......+.+|+.+|++++||||+++++++. ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778889999999999999875 5789999987532 223456889999999999999999999872 1368
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+|||||. ++|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 789988843 3458999999999999999999999 799999999999999999999999998531
Q ss_pred --------------------------c--CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--------------
Q 003033 676 --------------------------S--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-------------- 713 (855)
Q Consensus 676 --------------------------~--~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~-------------- 713 (855)
. ..++.++|||||||++|+|+||++||...........
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 0 3456789999999999999999999965443221100
Q ss_pred ---hcc----cccccCC----CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 714 ---TGK----LKNLLDP----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 714 ---~~~----~~~~~d~----~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... +..+... ....+| ..+..+.+|+.+||..||.+||++ ++++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~-~e~l 288 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTA-EEAL 288 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCH-HHHh
Confidence 000 0000000 001111 234568899999999999999999 6664
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=290.02 Aligned_cols=221 Identities=25% Similarity=0.464 Sum_probs=179.0
Q ss_pred CccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+|...+.||+|+||.||+|.+.+ ..+|+|.+..... ....|.+|+.++++++||||+++++++. +..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 57778899999999999998764 5799999865432 3457889999999999999999999884 457899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
++|.+++... ...+++.....|+.||+.||.|||+ .+|+||||||+||+++.++.+||+|||+..
T Consensus 84 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 84 GCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence 9999998533 2368999999999999999999999 799999999999999999999999997431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|+| |++||............. .. .....|...+..+.+
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~ 232 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS---AG---YRLYRPKLAPTEVYT 232 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH---cC---CcCCCCCCCCHHHHH
Confidence 2345678999999999999999 899997544332221111 11 111233345678999
Q ss_pred HHHHhhccCCCCCCChHHHHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
|+.+||..+|.+||++ .++++.|
T Consensus 233 li~~cl~~~p~~Rpt~-~~~l~~l 255 (256)
T cd05059 233 IMYSCWHEKPEDRPAF-KKLLSQL 255 (256)
T ss_pred HHHHHhcCChhhCcCH-HHHHHHh
Confidence 9999999999999999 7887765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=294.95 Aligned_cols=229 Identities=29% Similarity=0.466 Sum_probs=178.9
Q ss_pred ccccceeeccCceEEEEEEEC------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceecC----ceEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTL 598 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~~L 598 (855)
|...+.||+|+||.||++.+. +..||+|.+..... .....|.+|+++|++++||||++++++|.. ..++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 477889999999999886542 46799999976532 234678899999999999999999998732 4789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++.. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999843 248999999999999999999999 799999999999999999999999997532
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-HHHHHhhc-------ccccccC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTG-------KLKNLLD 722 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-~~~~~~~~-------~~~~~~d 722 (855)
...++.++|||||||++|+|+||..||..... ........ .+...++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 13457789999999999999999999854321 11111000 0001111
Q ss_pred C-CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 723 P-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 723 ~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
. .....|...+..+.+|+.+||+.+|.+||++ ++++..|+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF-RSLIPILKEMH 282 (283)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCH-HHHHHHHHHhh
Confidence 0 1112233456789999999999999999999 88999988763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=296.46 Aligned_cols=225 Identities=28% Similarity=0.450 Sum_probs=180.2
Q ss_pred CccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
+|.....||+|+||.||+|.... ..+|+|.+...... ....+.+|+.++..++||||+++++.|. +..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 46778899999999999998642 46899988754321 2456889999999999999999999884 46789
Q ss_pred EEEecCCCCHHHHhcccC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCc
Q 003033 599 VYEYLPNGSLEDRLSCKD---------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~---------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~N 657 (855)
||||+++|+|.+++.... ...++++..++.++.|++.||.|||+ ++|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence 999999999999874321 12358899999999999999999998 799999999999
Q ss_pred eeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH
Q 003033 658 ILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ 709 (855)
Q Consensus 658 ILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~ 709 (855)
||+++++.+||+|||+.. ...++.++|||||||++|+|+| |.+||.......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999998542 1224667999999999999999 999997544322
Q ss_pred --HHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 710 --YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 710 --~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.....+ .....|...+..+.+++.+||+.+|.+||++ .+++..|+.+
T Consensus 238 ~~~~~~~~--------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~-~~i~~~l~~~ 286 (290)
T cd05045 238 LFNLLKTG--------YRMERPENCSEEMYNLMLTCWKQEPDKRPTF-ADISKELEKM 286 (290)
T ss_pred HHHHHhCC--------CCCCCCCCCCHHHHHHHHHHccCCcccCCCH-HHHHHHHHHH
Confidence 111111 1111233445789999999999999999999 8899999876
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=294.73 Aligned_cols=224 Identities=25% Similarity=0.483 Sum_probs=180.8
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
.+|...+.||+|+||.||+|... +..||||.+...... ....|.+|+++|.+++||||+++++++. +..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46788889999999999999764 257999999765433 3467999999999999999999999984 4688
Q ss_pred EEEEecCCCCHHHHhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 598 LVYEYLPNGSLEDRLSCKD-----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
+||||+++|+|.+++.... ....+++.....++.+++.||.|||+ ++|+||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 9999999999999985432 12458899999999999999999999 799999999999999999999
Q ss_pred EEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcc
Q 003033 667 KLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGK 716 (855)
Q Consensus 667 KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~ 716 (855)
||+|||... .+.++.++|||||||++|+|++ |..||....... ..+..+.
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~ 241 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR 241 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 999997431 2345778999999999999998 999986443322 1112211
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
. ...+...+..+.+|+.+||..||.+||++ .+|++.|+
T Consensus 242 ~--------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~eil~~l~ 279 (280)
T cd05049 242 L--------LQRPRTCPSEVYDIMLGCWKRDPQQRINI-KDIHERLQ 279 (280)
T ss_pred c--------CCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHhh
Confidence 1 11122345789999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=293.66 Aligned_cols=225 Identities=24% Similarity=0.418 Sum_probs=178.5
Q ss_pred CCccccceeeccCceEEEEEEEC--Ce----EEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC-ceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~----~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~LV 599 (855)
.+|...+.||+|+||.||+|.+. +. .|++|.+...... ....+..|+.++.+++||||++++|++.+ ..+++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i 86 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV 86 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence 35777889999999999999874 32 4788887643221 23567788889999999999999999854 56799
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
+||+++|+|.+++... ...++|..+..|+.||+.||.|||+ ++++||||||+|||++.++.+||+|||+..
T Consensus 87 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 87 TQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 9999999999999532 3468999999999999999999999 789999999999999999999999997431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p 729 (855)
.+.++.++|||||||++|||+| |.+||....... ..+..+.. . ..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~------~~~ 233 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER--L------AQP 233 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc--C------CCC
Confidence 2346778999999999999998 999997554322 22222111 0 112
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+..+.+++.+||..+|.+||++ .+++..|..+.
T Consensus 234 ~~~~~~~~~li~~c~~~~p~~Rps~-~el~~~l~~~~ 269 (279)
T cd05111 234 QICTIDVYMVMVKCWMIDENVRPTF-KELANEFTRMA 269 (279)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHH
Confidence 2234578899999999999999999 78888888763
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=306.82 Aligned_cols=206 Identities=22% Similarity=0.251 Sum_probs=168.2
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
+.||+|+||.||++... +..||||++..... .....+.+|+.+|+.++||||+++++++. +..+|||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999875 57899999976422 23456889999999999999999999884 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 99998843 3468999999999999999999999 899999999999999999999999998532
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
...++.++|||||||++|+|++|++||...+........ ......+|...+..+.+|+.
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~-------~~~~~~~p~~~~~~~~~li~ 227 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI-------LMEDIKFPRTLSADAKSLLS 227 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh-------ccCCccCCCCCCHHHHHHHH
Confidence 234577899999999999999999999765443221111 00112344455678999999
Q ss_pred HhhccCCCCCC
Q 003033 742 RCCEMSRKSRP 752 (855)
Q Consensus 742 ~Cl~~dP~~RP 752 (855)
+||..||.+||
T Consensus 228 ~~L~~dP~~R~ 238 (328)
T cd05593 228 GLLIKDPNKRL 238 (328)
T ss_pred HHcCCCHHHcC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=297.09 Aligned_cols=228 Identities=24% Similarity=0.487 Sum_probs=184.1
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
++|...+.||+|+||.||++... +..+|+|.+..........|.+|+.+|.+++||||++++++|. +..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888889999999999999752 2458999987654444567899999999999999999999984 46889
Q ss_pred EEEecCCCCHHHHhcccC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEE
Q 003033 599 VYEYLPNGSLEDRLSCKD----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL 668 (855)
||||+++|+|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence 999999999999985322 12358999999999999999999999 79999999999999999999999
Q ss_pred eeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccc
Q 003033 669 SDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLK 718 (855)
Q Consensus 669 ~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~ 718 (855)
+|||+.. ...++.++|||||||++|+|+| |.+||....... ..+..+..
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~- 240 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV- 240 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 9997431 1335678999999999999998 999996544322 22222211
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
...+...+..+.+|+.+||+.||.+||++ +++...|+.+..
T Consensus 241 -------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~v~~~l~~~~~ 281 (288)
T cd05093 241 -------LQRPRTCPKEVYDLMLGCWQREPHMRLNI-KEIHSLLQNLAK 281 (288)
T ss_pred -------CCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHHHHH
Confidence 11222345679999999999999999999 899999998854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=288.65 Aligned_cols=217 Identities=28% Similarity=0.456 Sum_probs=174.3
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCHH
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLE 609 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL~ 609 (855)
.||+|+||.||+|... ++.||+|.+..... .....|.+|++++++++||||++++++|. ...+|||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 5899999999999874 68899998864422 22456899999999999999999999984 4678999999999999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------------
Q 003033 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------------- 675 (855)
Q Consensus 610 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------------- 675 (855)
+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 82 TFLRTE--GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 998532 3468999999999999999999999 799999999999999999999999997532
Q ss_pred -------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 -------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 -------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
.+.++.++|||||||++|+|++ |.+||.............. .....++...+..+.+|+.
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~ 230 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ------GVRLPCPELCPDAVYRLME 230 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc------CCCCCCcccCCHHHHHHHH
Confidence 2235667999999999999998 8999864433221111100 0111234445678999999
Q ss_pred HhhccCCCCCCChHHHHHHHHh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
+||..+|.+||++ +++++.|+
T Consensus 231 ~~l~~~p~~Rps~-~~~~~~l~ 251 (252)
T cd05084 231 RCWEYDPGQRPSF-STVHQELQ 251 (252)
T ss_pred HHcCCChhhCcCH-HHHHHHHh
Confidence 9999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=298.01 Aligned_cols=230 Identities=26% Similarity=0.455 Sum_probs=181.2
Q ss_pred CCccccceeeccCceEEEEEEECC----eEEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV 599 (855)
++|.....||+|+||.||+|.... ..+++|.++... ......|.+|+.++.++ +||||+++++++. +..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467888899999999999998753 347888887432 22345788999999999 7999999999984 357899
Q ss_pred EEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 600 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
|||+++|+|.+++.... ....+++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 99999999999985321 11358899999999999999999999 799999999999999999999
Q ss_pred EEeeccccc------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccccc
Q 003033 667 KLSDFEFLA------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 667 KL~DFg~~~------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
||+|||+.. ...++.++|||||||++|+|+| |.+||............ .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~------~ 232 (297)
T cd05089 159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL------P 232 (297)
T ss_pred EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH------h
Confidence 999998431 1235778999999999999997 99999654432211111 1
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.......|...+..+.+|+.+||..+|.+||++ .++++.|+.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~~~~ 277 (297)
T cd05089 233 QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPF-AQISVQLSRMLE 277 (297)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHH
Confidence 111112233455789999999999999999999 788888887743
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=308.75 Aligned_cols=231 Identities=29% Similarity=0.510 Sum_probs=185.0
Q ss_pred CccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
.....++||+|-||.|..+...+ ..||||++++..... ...|.+||.+|.+|+|||||.|+|+| .+.+|+|+|||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 34457789999999999999887 899999999876544 58899999999999999999999999 567899999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
+|+|..+|..... +.+.-..-.+|+.||+.|++||.+ .++|||||.+.|||+|.++++||+|||+.
T Consensus 619 nGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 619 NGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred cCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 9999999964422 224555667899999999999999 68999999999999999999999999743
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHh--CCCCCCCchHHHHHHhhccccccc-CCCCCCCChhhHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYALDTGKLKNLL-DPLAGDWPFVQAE 734 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~ellt--G~~pf~~~~~~~~~~~~~~~~~~~-d~~~~~~p~~~~~ 734 (855)
.-+++|+++|||+||+++||+++ ...||......+-.-+.+.+..-. .......|..++.
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~ 774 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQ 774 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcH
Confidence 23678999999999999999865 678886444322222222221111 1122334666778
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
.+.+|+++||..+..+||++ +++...|..
T Consensus 775 ~lyelml~Cw~~es~~RPsF-e~lh~~lq~ 803 (807)
T KOG1094|consen 775 GLYELMLRCWRRESEQRPSF-EQLHLFLQE 803 (807)
T ss_pred HHHHHHHHHhchhhhcCCCH-HHHHHHHHH
Confidence 89999999999999999999 777666654
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=289.71 Aligned_cols=217 Identities=24% Similarity=0.452 Sum_probs=175.9
Q ss_pred eeeccCceEEEEEEEC----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCCCCH
Q 003033 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGSL 608 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~GsL 608 (855)
.||+|+||.||+|.+. +..||+|++...... ....|.+|+.++++++||||++++++|. +..++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999775 346999999765322 2456899999999999999999999984 457899999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
.+++.. ....+++..+..++.+++.||.|||. ++++||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 82 NKFLSG--KKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 999853 23468999999999999999999999 799999999999999999999999998431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|++ |.+||........ .+..+ .....|...+.++.
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~ 228 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG--------KRLDCPAECPPEMY 228 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--------CCCCCCCCCCHHHH
Confidence 1234668999999999999996 9999965443221 11111 11234445568899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+++.+||..+|++||++ .+|.+.|+.+
T Consensus 229 ~li~~c~~~~~~~Rp~~-~~i~~~l~~~ 255 (257)
T cd05115 229 ALMKDCWIYKWEDRPNF-AKVEERMRTY 255 (257)
T ss_pred HHHHHHcCCChhhCcCH-HHHHHHHhhh
Confidence 99999999999999999 7888877743
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=309.30 Aligned_cols=214 Identities=23% Similarity=0.308 Sum_probs=173.4
Q ss_pred cCCccccceeeccCceEEEEEEECC---eEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.++|.....||+|+||.||+|.+.+ ..||+|.+.... ......+.+|+.+|..++|||||++++++. +..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3468889999999999999998653 579999986532 223456889999999999999999999984 45889
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 109 v~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 9999999999999853 2468999999999999999999999 899999999999999999999999998532
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|||++|.+||............ .. ....+|...+..+
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i------~~-~~~~~p~~~~~~~ 255 (340)
T PTZ00426 183 TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKI------LE-GIIYFPKFLDNNC 255 (340)
T ss_pred CCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHH------hc-CCCCCCCCCCHHH
Confidence 233677899999999999999999999765543211111 00 0112344455778
Q ss_pred HHHHHHhhccCCCCCCC
Q 003033 737 ANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs 753 (855)
.+++.+||+.||.+|++
T Consensus 256 ~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 256 KHLMKKLLSHDLTKRYG 272 (340)
T ss_pred HHHHHHHcccCHHHcCC
Confidence 99999999999999973
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=305.87 Aligned_cols=206 Identities=22% Similarity=0.273 Sum_probs=167.3
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
+.||+|+||.||++... +..||+|++..... .....+.+|+.++..++||||++++++|. +..||||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999875 57899999976422 23446778999999999999999999884 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|..++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 99988853 2468999999999999999999999 799999999999999999999999997421
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
.+.++.++|||||||++|+|++|+.||............ . .....+|...+..+.+|+.
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~--~-----~~~~~~p~~~~~~~~~li~ 227 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--L-----MEEIRFPRTLSPEAKSLLA 227 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH--h-----cCCCCCCCCCCHHHHHHHH
Confidence 234677899999999999999999999655432211110 0 0011234455678999999
Q ss_pred HhhccCCCCCC
Q 003033 742 RCCEMSRKSRP 752 (855)
Q Consensus 742 ~Cl~~dP~~RP 752 (855)
+||..||.+||
T Consensus 228 ~~L~~dP~~R~ 238 (323)
T cd05595 228 GLLKKDPKQRL 238 (323)
T ss_pred HHccCCHHHhC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=292.21 Aligned_cols=227 Identities=25% Similarity=0.446 Sum_probs=181.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--C---eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~---~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.++|+..+.||+|+||.||+|... + ..+|+|.+..... .....|.+|+.++.+++||||+++++++. +..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346888899999999999999875 2 3699999876432 22456889999999999999999999984 46789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++.. ....+++..+..++.+++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999853 23468999999999999999999999 799999999999999999999999997431
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|||++ |+.||.............. .....++
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~------~~~~~~~ 232 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND------GFRLPAP 232 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc------CCCCCCC
Confidence 1334678999999999999997 9999965443221111111 1111223
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+..+.+|+.+||..+|.+||++ .+|+..|+.+
T Consensus 233 ~~~~~~~~~li~~c~~~~p~~Rp~~-~~i~~~l~~~ 267 (268)
T cd05063 233 MDCPSAVYQLMLQCWQQDRARRPRF-VDIVNLLDKL 267 (268)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence 3455789999999999999999999 8898888764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=305.80 Aligned_cols=227 Identities=26% Similarity=0.427 Sum_probs=180.1
Q ss_pred cCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec---C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~---~ 594 (855)
.++|.+.+.||+|+||.||+|...+ +.||+|+++..... ....+.+|+.++.++ +||||++++++|. .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 3468889999999999999996532 57999998754322 234678899999999 8999999999883 3
Q ss_pred ceEEEEEecCCCCHHHHhcccCC---------------------------------------------------------
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDN--------------------------------------------------------- 617 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------- 617 (855)
.++++|||+++|+|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 57899999999999998853211
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------------------
Q 003033 618 -SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------------------- 675 (855)
Q Consensus 618 -~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------------------- 675 (855)
..+++|..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 1268999999999999999999999 899999999999999999999999998432
Q ss_pred ------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH---HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhc
Q 003033 676 ------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE---VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE 745 (855)
Q Consensus 676 ------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~---~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~ 745 (855)
...++.++|||||||+||+|++ |.+||..... ....+..+.. ...|...+..+.+++.+||+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~cl~ 314 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR--------MRAPEYATPEIYSIMLDCWH 314 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC--------CCCCccCCHHHHHHHHHHcc
Confidence 2335778999999999999998 9999964322 1111111111 11123345679999999999
Q ss_pred cCCCCCCChHHHHHHHHhhh
Q 003033 746 MSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 746 ~dP~~RPs~~~evl~~L~~~ 765 (855)
.+|.+||++ .++++.|+.+
T Consensus 315 ~~p~~RPs~-~ell~~l~~~ 333 (337)
T cd05054 315 NNPEDRPTF-SELVEILGDL 333 (337)
T ss_pred CChhhCcCH-HHHHHHHHHH
Confidence 999999999 8999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=289.33 Aligned_cols=225 Identities=29% Similarity=0.475 Sum_probs=182.2
Q ss_pred CCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN 605 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~ 605 (855)
++|+..++||+|+||.||+|... +..||+|.+..... ....|.+|+.++++++||||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCC
Confidence 46888899999999999999876 46799999976543 4567999999999999999999999884 357899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++... ....+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 85 GSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 9999998542 23458999999999999999999999 799999999999999999999999997431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++||||||+++|+|++ |.+||............ ........+...+..+.+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV------ERGYRMPCPQDCPISLHE 234 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH------HcCCCCCCCCcCCHHHHH
Confidence 1235668999999999999999 89999654432211111 011112234445678999
Q ss_pred HHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 739 LAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
|+.+||..+|.+||++ .++.+.|+.
T Consensus 235 li~~~l~~~p~~Rpt~-~~l~~~l~~ 259 (260)
T cd05070 235 LMLQCWKKDPEERPTF-EYLQSFLED 259 (260)
T ss_pred HHHHHcccCcccCcCH-HHHHHHHhc
Confidence 9999999999999999 788887763
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=297.66 Aligned_cols=229 Identities=26% Similarity=0.431 Sum_probs=183.6
Q ss_pred cccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
...++|+..+.||+|+||.||++...+ ..||+|.+..... .....+.+|+.++.++ +||||++++++|.
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 344578888999999999999998642 5699999875422 2234688999999999 7999999999984
Q ss_pred CceEEEEEecCCCCHHHHhccc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~-------------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
+..++||||+++|+|.+++... .....+++..++.++.|++.||.|||+ ++|+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEE
Confidence 3588999999999999998532 223568999999999999999999998 799999999999999
Q ss_pred CCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--H
Q 003033 661 DANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--Y 710 (855)
Q Consensus 661 d~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~ 710 (855)
+.++.+||+|||+.. ...++.++|||||||++|+|++ |..||....... .
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 999999999997431 1235667999999999999998 999986544322 1
Q ss_pred HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 711 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 711 ~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+..+ .....|...+..+.+|+.+||..||++||++ .+++..|+.+
T Consensus 246 ~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~eil~~l~~~ 291 (293)
T cd05053 246 LLKEG--------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTF-KQLVEDLDRM 291 (293)
T ss_pred HHHcC--------CcCCCCCCCCHHHHHHHHHHcccCcccCcCH-HHHHHHHHHh
Confidence 11111 1122344556789999999999999999999 8899988865
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=296.32 Aligned_cols=228 Identities=26% Similarity=0.525 Sum_probs=183.2
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.+|.....||+|+||.||+|... ...|++|.+..........|.+|+.++++++||||+++++++. +..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777789999999999999753 2458999987655444567999999999999999999999984 45789
Q ss_pred EEEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc
Q 003033 599 VYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
||||+++|+|.+++.... ....++|..+..++.+|+.||.|||+ ++|+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence 999999999999985422 12348999999999999999999999 89999999999999999999
Q ss_pred EEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhc
Q 003033 666 SKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTG 715 (855)
Q Consensus 666 ~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~ 715 (855)
+||+|||+.. ...++.++|||||||++|+|+| |++||....... .....+
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~ 241 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG 241 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence 9999997531 1334678999999999999999 999986543322 111111
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 716 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 716 ~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
. ....+...+..+.+|+.+||+.+|.+||++ .+|++.|+.+..
T Consensus 242 ~--------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~v~~~l~~~~~ 284 (291)
T cd05094 242 R--------VLERPRVCPKEVYDIMLGCWQREPQQRLNI-KEIYKILHALGK 284 (291)
T ss_pred C--------CCCCCccCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHHh
Confidence 1 111233345779999999999999999999 899999998743
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=292.18 Aligned_cols=227 Identities=22% Similarity=0.399 Sum_probs=181.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--Ce----EEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~----~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~L 598 (855)
..+|...++||+|+||.||+|.+. +. .||+|++...... ....+.+|+.++..++||||+.++++|. ...++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l 85 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL 85 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence 346888899999999999999864 22 5899998754322 2456889999999999999999999984 45789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
+|||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 ~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 86 VTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 99999999999998532 3468999999999999999999999 799999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|||++ |.+||....... ..+..+.. ...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 232 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER--------LPQ 232 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc--------CCC
Confidence 1235668999999999999998 999996543221 11221110 111
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+...+..+.+++.+||..||.+||++ .+++..|+.+..
T Consensus 233 ~~~~~~~~~~li~~~l~~dp~~Rp~~-~~l~~~l~~~~~ 270 (279)
T cd05109 233 PPICTIDVYMIMVKCWMIDSECRPRF-RELVDEFSRMAR 270 (279)
T ss_pred CccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHhhc
Confidence 22345679999999999999999999 788888887643
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=309.70 Aligned_cols=216 Identities=24% Similarity=0.313 Sum_probs=172.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..+.||+|+||.||++... ++.||||++..... .....+.+|+.+|..++||||++++++|. +..+|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999885 57899999975421 22346788999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 99999999999853 2458999999999999999999999 799999999999999999999999998532
Q ss_pred ----------------------------------------------------------cCCCCcchhHHHHHHHHHHHHh
Q 003033 676 ----------------------------------------------------------SGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 676 ----------------------------------------------------------~~~~t~ksDVwSfGvvl~ellt 697 (855)
...++.++|||||||++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 1235778999999999999999
Q ss_pred CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 003033 698 GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 698 G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs 753 (855)
|.+||................. ..........+..+.+|+.+|+. +|.+|++
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~ 286 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKE---TLQFPDEVPLSPEAKDLIKRLCC-EAERRLG 286 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC---ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence 9999976654332221111111 01101111235678899999996 9999998
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=298.48 Aligned_cols=229 Identities=27% Similarity=0.471 Sum_probs=180.4
Q ss_pred CCccccceeeccCceEEEEEEEC--C--eEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--H--MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~--~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV 599 (855)
++|+....||+|+||.||+|.+. + ..+|+|.+..... .....|.+|+.++.++ +||||++++++|. +..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46888889999999999999875 3 3468887764322 2345788999999999 8999999999984 468899
Q ss_pred EEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 600 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
|||+++|+|.+++.... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 99999999999985432 12368999999999999999999999 899999999999999999999
Q ss_pred EEeeccccc------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccccc
Q 003033 667 KLSDFEFLA------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 667 KL~DFg~~~------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
||+|||+.. ...++.++|||||||++|+|+| |.+||......... .. +.
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~-----~~ 237 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-EK-----LP 237 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH-HH-----Hh
Confidence 999998542 1235778999999999999998 99999644332211 11 01
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
.......+...+..+.+|+.+||..+|.+||++ ++++..|+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~il~~l~~~~ 281 (303)
T cd05088 238 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRML 281 (303)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHH
Confidence 111112233345679999999999999999999 78888888763
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=289.43 Aligned_cols=224 Identities=31% Similarity=0.505 Sum_probs=182.7
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecC
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLP 604 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~ 604 (855)
.++|...++||+|+||.||+|... +..||+|.+.... .....|.+|+.++++++||||+++++++. +..++||||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC
Confidence 356888999999999999999875 4789999987544 34568999999999999999999999874 46789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++.... ...+++..+..++.+++.||.|||+ .+++||||||+||+++.++.++|+|||+..
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 84 NGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 999999985432 3468999999999999999999998 799999999999999999999999997432
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+.++.++|||||||++|+|++ |++||........ .+..+. ....+...+.+
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 231 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY--------RMPRPDNCPEE 231 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC--------CCCCCCCCCHH
Confidence 1234668999999999999999 9999975543221 111111 11122234567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.+++.+||..+|.+||++ +++...|+.
T Consensus 232 ~~~li~~~l~~~p~~Rp~~-~~l~~~l~~ 259 (260)
T cd05067 232 LYELMRLCWKEKPEERPTF-EYLRSVLED 259 (260)
T ss_pred HHHHHHHHccCChhhCCCH-HHHHHHhhc
Confidence 9999999999999999999 889888874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=307.67 Aligned_cols=232 Identities=28% Similarity=0.477 Sum_probs=192.3
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
++++....+.....+||-|.||.||.|.|+. ..||||.++.+.. ...+|+.|..+|+.++|||+|+|+|+|. ..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 4444444556667899999999999999984 7899999986543 5789999999999999999999999994 468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-- 674 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-- 674 (855)
|||.|||.+|+|.++|...+ ...++--..+.++.||..|+.||.. +++|||||-..|+|+..+..+|++|||+.
T Consensus 339 YIiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred EEEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhh
Confidence 99999999999999996543 3456667788999999999999998 78999999999999999999999999842
Q ss_pred ------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCC
Q 003033 675 ------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 675 ------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 727 (855)
....++.|+|||+|||+|||+.| |-.||.+.+. +...++.+. +-+
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy--------RM~ 486 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY--------RMD 486 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc--------ccc
Confidence 22346779999999999999988 8889976653 323333332 223
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
-|..+++.+.+|+..||+++|.+||++ .++-+.++.|-
T Consensus 487 ~PeGCPpkVYeLMraCW~WsPsDRPsF-aeiHqafEtmf 524 (1157)
T KOG4278|consen 487 GPEGCPPKVYELMRACWNWSPSDRPSF-AEIHQAFETMF 524 (1157)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCccH-HHHHHHHHHHh
Confidence 466778899999999999999999999 78888888763
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=309.59 Aligned_cols=230 Identities=26% Similarity=0.434 Sum_probs=183.2
Q ss_pred hcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCCC-hhhHHHHHHHHHhcC-CCcceeEeceec-
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKIR-HPNLVTLVGACP- 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~-HpnIV~l~g~~~- 593 (855)
....++|.+.++||+|+||.||+|.+++ ..||||+++...... ...|.+|+.+|.++. |||||+++|+|.
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 3445578888999999999999998653 579999997643222 346889999999997 999999999994
Q ss_pred -CceEEEEEecCCCCHHHHhcccC--------------------------------------------------------
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKD-------------------------------------------------------- 616 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------------------------- 616 (855)
+..++||||+++|+|.++|....
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 46789999999999999985321
Q ss_pred ---------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCc
Q 003033 617 ---------------------------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657 (855)
Q Consensus 617 ---------------------------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~N 657 (855)
....++|.....|+.||+.||.|||+ .+|+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcce
Confidence 11357888899999999999999998 799999999999
Q ss_pred eeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH
Q 003033 658 ILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ 709 (855)
Q Consensus 658 ILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~ 709 (855)
||++.++.+||+|||+.. ...++.++|||||||++|||++ |..||.......
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 999999999999998532 1224678999999999999998 889986543222
Q ss_pred HH---HhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 710 YA---LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 710 ~~---~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.. +..+ .....|...+..+.+|+.+||..+|.+||++ ++|+..|+.+
T Consensus 350 ~~~~~~~~~--------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-~ell~~L~~~ 399 (401)
T cd05107 350 QFYNAIKRG--------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDF-SQLVHLVGDL 399 (401)
T ss_pred HHHHHHHcC--------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHH
Confidence 11 1111 1112233456789999999999999999999 8999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=296.49 Aligned_cols=232 Identities=28% Similarity=0.492 Sum_probs=177.7
Q ss_pred CCccccceeeccCceEEEEEEECC----------------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH----------------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVG 590 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~----------------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g 590 (855)
++|...++||+|+||.||++...+ ..||||.++..... ....|.+|+++|++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987542 24899999764322 2356889999999999999999999
Q ss_pred eec--CceEEEEEecCCCCHHHHhcccC---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCcee
Q 003033 591 ACP--EVWTLVYEYLPNGSLEDRLSCKD---------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659 (855)
Q Consensus 591 ~~~--~~~~LV~Ey~~~GsL~~~L~~~~---------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NIL 659 (855)
++. +..++||||+++++|.+++.... ....+++..+..++.+++.||.|||+ ++++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence 983 46889999999999999985321 12347899999999999999999999 79999999999999
Q ss_pred eCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh--CCCCCCCchHHHH
Q 003033 660 LDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQY 710 (855)
Q Consensus 660 ld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt--G~~pf~~~~~~~~ 710 (855)
++.++.+||+|||+.. .+.++.++|||||||++|+|++ |..||........
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence 9999999999997431 1335778999999999999998 6678865432221
Q ss_pred HHhhcc-cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 711 ALDTGK-LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 711 ~~~~~~-~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
...... +...........+...+..+.+|+.+||..||.+||++ ++|++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~-~~i~~~l~ 294 (295)
T cd05097 242 IENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTF-NKIHHFLR 294 (295)
T ss_pred HHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHh
Confidence 111111 00000111111122345789999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=286.34 Aligned_cols=230 Identities=26% Similarity=0.382 Sum_probs=182.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||+|.++.... .....+.+|+.++++++|+||+++++++. +..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999886 68899999875322 22457889999999999999999999884 4678999
Q ss_pred EecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
||+++|+|..++... .....+++..+..++.+++.||.|||+ .+|+||||||+||+++.++.++|+|||+.
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988532 233568999999999999999999999 79999999999999999999999999742
Q ss_pred --------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhcccccccCCCCCCCCh-hh
Q 003033 675 --------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLDPLAGDWPF-VQ 732 (855)
Q Consensus 675 --------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-~~~~~~~~~~~~~d~~~~~~p~-~~ 732 (855)
....++.++|||||||++|+|++|+.||...... ...... ...... ...|. ..
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~ 233 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK-IEKCDY----PPLPADHY 233 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh-hhcCCC----CCCChhhc
Confidence 1233566899999999999999999998543311 111110 000111 11222 34
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+..+.+++.+||..+|.+||++ .+|++.|+.++
T Consensus 234 ~~~~~~~i~~cl~~~p~~Rp~~-~~il~~~~~~~ 266 (267)
T cd08224 234 SEELRDLVSRCINPDPEKRPDI-SYVLQVAKEMH 266 (267)
T ss_pred CHHHHHHHHHHcCCCcccCCCH-HHHHHHHHHhc
Confidence 5679999999999999999999 88999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=292.14 Aligned_cols=227 Identities=25% Similarity=0.405 Sum_probs=180.7
Q ss_pred cCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
.++|.....||+|+||.||+|...+ ..||+|.+..... .....|.+|+.+|..++||||++++|++. ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3578888999999999999998753 5699999875432 22456889999999999999999999984 468
Q ss_pred EEEEEecCCCCHHHHhcccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 597 TLVYEYLPNGSLEDRLSCKDN-------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
++||||+++|+|.+++..... ...++|..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence 899999999999999854321 2347899999999999999999998 799999999999999999999999
Q ss_pred eccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccccc
Q 003033 670 DFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 670 DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
|||+.. .+.++.++|||||||++|||+| |.+||.............
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~------ 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI------ 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh------
Confidence 998421 2346778999999999999998 999996544322111110
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
.......|...+..+.+|+.+||..+|.+||++ .+++..|+
T Consensus 236 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~ 276 (277)
T cd05032 236 DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTF-LEIVSSLK 276 (277)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH-HHHHHHhc
Confidence 111112233346789999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=294.69 Aligned_cols=231 Identities=24% Similarity=0.416 Sum_probs=181.5
Q ss_pred cccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--C
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--E 594 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~ 594 (855)
...++|...++||+|+||.||+|..+ +..||+|.+..... .....|.+|+.+++.++||||+++++++. +
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34567899999999999999999754 24799999864432 12346889999999999999999999884 4
Q ss_pred ceEEEEEecCCCCHHHHhcccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKD-------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
..++||||+++|+|.+++.... ..+.+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEE
Confidence 6789999999999999995422 12456788889999999999999999 8999999999999999999999
Q ss_pred Eeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccc
Q 003033 668 LSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKN 719 (855)
Q Consensus 668 L~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~ 719 (855)
|+|||+.. .+.++.++|||||||++|||++ |.+||......... ..
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~-~~----- 233 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL-KF----- 233 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HH-----
Confidence 99998431 2345778999999999999998 78898654432211 10
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+.+......+...+..+.+++.+||+.||.+||++ .++++.|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~ll~~l~~~ 278 (288)
T cd05061 234 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-LEIVNLLKDD 278 (288)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHhh
Confidence 01111112233445789999999999999999999 7888887754
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=288.00 Aligned_cols=219 Identities=26% Similarity=0.458 Sum_probs=176.7
Q ss_pred ceeeccCceEEEEEEECC-----eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCCC
Q 003033 534 LKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 606 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~G 606 (855)
++||+|+||.||+|.+.. ..||+|.+...... ....+.+|+.+++.+.|||||++++++. +..++||||+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 369999999999997642 57999999865442 3457899999999999999999999884 4678999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++... ..+++..+..++.|++.||.|||. .+++||||||+|||++.++.+||+|||+..
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 81 PLLKYLKKR---REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred cHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 999999532 368999999999999999999998 789999999999999999999999996421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|++ |.+||................ ....|...+..+.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~ 228 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE------RLPRPEECPQEIY 228 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC------cCCCCCCCCHHHH
Confidence 1335668999999999999998 999997554322111111111 1123334557899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+|+.+||..+|.+||++ .+++..|+.+
T Consensus 229 ~li~~cl~~~p~~Rp~~-~~l~~~l~~~ 255 (257)
T cd05060 229 SIMLSCWKYRPEDRPTF-SELESTFRRD 255 (257)
T ss_pred HHHHHHhcCChhhCcCH-HHHHHHHHhc
Confidence 99999999999999999 8898888754
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=302.66 Aligned_cols=214 Identities=22% Similarity=0.285 Sum_probs=172.8
Q ss_pred CccccceeeccCceEEEEEEECC--eEEEEEEecCCC---CCChhhHHHHHHHHHhcCCC-cceeEecee--cCceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHP-NLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~Hp-nIV~l~g~~--~~~~~LV~ 600 (855)
+|...+.||+|+||.||+|...+ ..||||++.... ......+..|+.++..++|+ +|+.+++++ .+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788999999999999998864 689999997542 22345688899999999765 577888877 35689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++..+..++.||+.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 99999999998843 3458899999999999999999999 799999999999999999999999998432
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|+||++||............. .....+|...+..
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~-------~~~~~~~~~~~~~ 227 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM-------EHNVSYPKSLSKE 227 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH-------cCCCCCCCCCCHH
Confidence 2346778999999999999999999997655433221111 1112344455678
Q ss_pred HHHHHHHhhccCCCCCCChH
Q 003033 736 LANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~ 755 (855)
+.+|+.+||..||.+||+.+
T Consensus 228 ~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 228 AVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred HHHHHHHHhhcCHHHcCCCC
Confidence 99999999999999999864
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=297.70 Aligned_cols=230 Identities=25% Similarity=0.421 Sum_probs=184.8
Q ss_pred cCCccccceeeccCceEEEEEEECC---------eEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
.++|.+.+.||+|+||.||++...+ ..+|+|.+..... .....+.+|+.++.++ +||||++++++|.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4578899999999999999987532 4699999986432 2345688999999999 7999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
+..++||||+++|+|.+++..... ...++|..++.++.|++.||.|||+ ++++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEE
Confidence 468899999999999999964321 1358999999999999999999998 799999999999999
Q ss_pred CCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--
Q 003033 661 DANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY-- 710 (855)
Q Consensus 661 d~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~-- 710 (855)
+.++.+||+|||... ...++.++|||||||++|+|++ |.+||........
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~ 253 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 253 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 999999999997431 1235678999999999999998 8899875543221
Q ss_pred HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 711 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 711 ~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.+..+. ....|...+..+.+|+.+||..+|.+||++ .+|++.|+.+...
T Consensus 254 ~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~evl~~l~~~~~~ 302 (307)
T cd05098 254 LLKEGH--------RMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRILAL 302 (307)
T ss_pred HHHcCC--------CCCCCCcCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHHHH
Confidence 111111 112333456789999999999999999999 8999999988554
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=290.14 Aligned_cols=225 Identities=27% Similarity=0.341 Sum_probs=176.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
..+|...+.||+|+||.||+|... +..||+|++..........+.+|+.++.+++||||+++++++ .+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 357899999999999999999874 578999999765444456788999999999999999999988 3467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.. ..++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 88 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 999999998853 2468999999999999999999999 799999999999999999999999997421
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|++|.+||.............. .. ..+.....+...+.
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 239 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SN-FQPPKLKDKTKWSS 239 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec-CC-CCCCCCccccccCH
Confidence 12245679999999999999999999854332221111100 00 11111111122346
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+.+|+.+||..+|.+||++ +++++
T Consensus 240 ~~~~li~~~l~~~P~~Rp~~-~~il~ 264 (267)
T cd06646 240 TFHNFVKISLTKNPKKRPTA-ERLLT 264 (267)
T ss_pred HHHHHHHHHhhCChhhCcCH-HHHhc
Confidence 89999999999999999999 66654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=287.31 Aligned_cols=225 Identities=30% Similarity=0.466 Sum_probs=181.1
Q ss_pred CCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN 605 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~ 605 (855)
++|....+||+|+||.||+|.+.+ ..||+|.+.... .....|.+|+.++++++||||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence 457888899999999999998765 579999987543 23567899999999999999999999884 457899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++... ....+++..+..++.+++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 85 GSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 9999998543 23458999999999999999999998 799999999999999999999999998532
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
.+.++.++|||||||++|+|+| |.+||............ .. ......+...+..+.+
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV---ER---GYRMPCPQGCPESLHE 234 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc---CCCCCCCcccCHHHHH
Confidence 1234668999999999999999 89999754432211111 00 0111223345678999
Q ss_pred HHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 739 LAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
++.+||..||.+||++ ++|++.|+.
T Consensus 235 li~~~l~~~p~~Rp~~-~~i~~~l~~ 259 (260)
T cd05069 235 LMKLCWKKDPDERPTF-EYIQSFLED 259 (260)
T ss_pred HHHHHccCCcccCcCH-HHHHHHHhc
Confidence 9999999999999999 889888874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=294.08 Aligned_cols=226 Identities=25% Similarity=0.406 Sum_probs=179.0
Q ss_pred CccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
+|...+.||+|+||.||+|... +..||||.++...... ...|.+|+.++..++||||+++++++. +..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4677788999999999999864 2579999997543222 356889999999999999999999984 46789
Q ss_pred EEEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc
Q 003033 599 VYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
++||+++++|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence 999999999999984221 12358899999999999999999999 79999999999999999999
Q ss_pred EEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccc
Q 003033 666 SKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL 717 (855)
Q Consensus 666 ~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~ 717 (855)
+||+|||+.. .+.++.++|||||||++|||++ |.+||...........
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~---- 238 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM---- 238 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----
Confidence 9999998421 2345778999999999999998 8889865433221111
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 718 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 718 ~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+........|...+..+.+|+.+||+.+|.+||++ ++|+..|+.
T Consensus 239 --i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~-~~i~~~l~~ 282 (283)
T cd05091 239 --IRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRF-KDIHSRLRT 282 (283)
T ss_pred --HHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCH-HHHHHHhhC
Confidence 11111122344556789999999999999999999 888887763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=308.50 Aligned_cols=221 Identities=23% Similarity=0.309 Sum_probs=172.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.|..++.||+|+||.||+|... +..||||++..... .....+.+|+.+|.+++|||||++++++. +..+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999876 47899999976432 22456889999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++.. ...+++.....++.||+.||.|||. .+|+||||||+|||++.++++||+|||+..
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 9999999999853 2458889999999999999999999 799999999999999999999999999631
Q ss_pred ------------------------------------------------------------------cCCCCcchhHHHHH
Q 003033 676 ------------------------------------------------------------------SGELTPKSDVYSFG 689 (855)
Q Consensus 676 ------------------------------------------------------------------~~~~t~ksDVwSfG 689 (855)
...++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 12357789999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHH--hhccCCCCCCChHHHHH
Q 003033 690 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR--CCEMSRKSRPELGKDVW 759 (855)
Q Consensus 690 vvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~--Cl~~dP~~RPs~~~evl 759 (855)
|++|||+||++||.................. .........+.++.+|+.+ |+..+|..||++ .+++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~-~~~l 303 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENT---LHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA-DDIK 303 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHccccc---cCCCCCCCCCHHHHHHHHHHccCcccccCCCCH-HHHh
Confidence 9999999999999765543322221111100 0001111245678888888 555566679998 6664
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=293.63 Aligned_cols=226 Identities=24% Similarity=0.435 Sum_probs=179.4
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.+|....+||+|+||.||++... +..+|+|.+..........|.+|++++..++||||+++++++. +..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35677889999999999999642 3579999987655444567999999999999999999999884 46789
Q ss_pred EEEecCCCCHHHHhcccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 599 VYEYLPNGSLEDRLSCKDN------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
||||+++|+|.+++..... ...+++..+..++.||+.||.|||+ ++|+||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence 9999999999999854321 1358999999999999999999999 799999999999999999999
Q ss_pred EEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccc
Q 003033 667 KLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLK 718 (855)
Q Consensus 667 KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~ 718 (855)
||+|||+.. ...++.++|||||||++|+|++ |.+||.............
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--- 238 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT--- 238 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH---
Confidence 999998531 1335678999999999999998 999986443322211111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
.......|...+..+.+|+.+||..||.+||++ ++|+..|+
T Consensus 239 ---~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-~~l~~~l~ 279 (280)
T cd05092 239 ---QGRELERPRTCPPEVYAIMQGCWQREPQQRMVI-KDIHSRLQ 279 (280)
T ss_pred ---cCccCCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHh
Confidence 000111223345779999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=290.90 Aligned_cols=231 Identities=23% Similarity=0.360 Sum_probs=184.8
Q ss_pred ccCCccccceeeccCceEEEEEEECC------eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec---Cc
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP---EV 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~ 595 (855)
..++|.....||+|+||.||+|.+.. ..|++|.+..... .....+.+|+.+|.+++||||+++++++. ..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45678888999999999999998754 6799999875422 22456889999999999999999999873 45
Q ss_pred eEEEEEecCCCCHHHHhcccCCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEee
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNS-----PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~-----~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
.++++||+++|+|.+++...... ..+++..+..++.+++.||.|||+ ++++||||||+|||++.++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence 78999999999999998543222 468999999999999999999998 7999999999999999999999999
Q ss_pred ccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccC
Q 003033 671 FEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLD 722 (855)
Q Consensus 671 Fg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d 722 (855)
||+.. ...++.++|||||||++|++++ |++||..............
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~------ 234 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD------ 234 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc------
Confidence 98542 1235678999999999999999 9999975543332111110
Q ss_pred CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 723 ~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
......+...+..+.+++.+||..+|++||++ .+++..|+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~~~~~l~~~~ 277 (280)
T cd05043 235 GYRLAQPINCPDELFAVMACCWALDPEERPSF-SQLVQCLTDFH 277 (280)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHH
Confidence 01111233345789999999999999999999 89999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=301.88 Aligned_cols=207 Identities=27% Similarity=0.351 Sum_probs=166.9
Q ss_pred ceeeccCceEEEEEEE-----CCeEEEEEEecCCC----CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 534 LKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+.||+|+||.||++.. .+..||||++.... ......+..|+.+|..++||||++++++|. +..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999875 25789999997532 123346788999999999999999999884 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 999999999853 3457888889999999999999999 899999999999999999999999998532
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|||++|++||............ ... ...+|...+..+.
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~ 228 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI------LKG-KLNLPPYLTPEAR 228 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH------HcC-CCCCCCCCCHHHH
Confidence 123567899999999999999999999765543321111 010 1123444567899
Q ss_pred HHHHHhhccCCCCCCC
Q 003033 738 NLAMRCCEMSRKSRPE 753 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs 753 (855)
+|+.+||..||.+||+
T Consensus 229 ~li~~~l~~~p~~R~~ 244 (323)
T cd05584 229 DLLKKLLKRNPSSRLG 244 (323)
T ss_pred HHHHHHcccCHhHcCC
Confidence 9999999999999994
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=293.80 Aligned_cols=212 Identities=27% Similarity=0.428 Sum_probs=165.9
Q ss_pred eeeccCceEEEEEEEC--------------------------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeE
Q 003033 535 KIGEGGYGSIYKGLLR--------------------------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--------------------------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l 588 (855)
+||+|+||.||+|.+. ...||+|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999742 13589999876543334578899999999999999999
Q ss_pred eceec--CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC--
Q 003033 589 VGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-- 664 (855)
Q Consensus 589 ~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-- 664 (855)
+|+|. ...+|||||+++|+|..++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCcc
Confidence 99984 457899999999999998853 23468899999999999999999998 7999999999999997643
Q ss_pred -----cEEEeeccccc----------------------cCCCCcchhHHHHHHHHHHH-HhCCCCCCCchHHH--HHHhh
Q 003033 665 -----VSKLSDFEFLA----------------------SGELTPKSDVYSFGIILLRL-LTGRPALGITKEVQ--YALDT 714 (855)
Q Consensus 665 -----~~KL~DFg~~~----------------------~~~~t~ksDVwSfGvvl~el-ltG~~pf~~~~~~~--~~~~~ 714 (855)
.+|++|||+.. ...++.++|||||||++||| ++|.+||....... ..+..
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 236 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK 236 (274)
T ss_pred cCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh
Confidence 48999997421 13467889999999999999 47999996543221 11111
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
. ...|......+.+|+.+||+.+|.+||++ .+|++.|
T Consensus 237 ~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~il~~L 273 (274)
T cd05076 237 K----------HRLPEPSCKELATLISQCLTYEPTQRPSF-RTILRDL 273 (274)
T ss_pred c----------cCCCCCCChHHHHHHHHHcccChhhCcCH-HHHHHhh
Confidence 0 01111223568999999999999999999 7787665
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=317.34 Aligned_cols=221 Identities=19% Similarity=0.242 Sum_probs=176.4
Q ss_pred CccccceeeccCceEEEEEEEC---CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
.|...+.||+|+||.||++... +..||+|.+..........+.+|+.+|+.++|||||+++++| .+..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999764 457899987654433345678899999999999999999998 45789999999
Q ss_pred CCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 604 PNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++|+|.++|... ....++++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988532 234568999999999999999999999 799999999999999999999999997431
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|+||++||............ +... ...+|...+..
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~--~~~~----~~~~~~~~s~~ 298 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV--LYGK----YDPFPCPVSSG 298 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhCC----CCCCCccCCHH
Confidence 234677899999999999999999999765443211111 0011 11233345578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|+.+||..||.+||++ .+++
T Consensus 299 ~~~li~~~L~~dP~~Rps~-~~~l 321 (478)
T PTZ00267 299 MKALLDPLLSKNPALRPTT-QQLL 321 (478)
T ss_pred HHHHHHHHhccChhhCcCH-HHHH
Confidence 9999999999999999998 4443
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=288.90 Aligned_cols=231 Identities=26% Similarity=0.384 Sum_probs=181.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.+|...+.||.|+||.||+|... +..||||.+...... ....|.+|+.+++.++||||+++++++. +..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 36778889999999999999864 688999988654322 2357889999999999999999999883 4678999
Q ss_pred EecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
||+++++|.+++... .....+++..+..++.+|+.||.|||+ ++|+|+||||+||+++.++.++|+|||+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988532 223468999999999999999999999 899999999999999999999999997421
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++||||||+++|+|++|..||............ .+.....+ ...+...+.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~ 235 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK-KIEQCDYP--PLPSDHYSE 235 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh-hhhcCCCC--CCCcccccH
Confidence 234566899999999999999999998643321111111 11111111 001123557
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+.+++.+||..+|.+|||+ .+|++++.++
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~-~~i~~~~~~~ 265 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDI-TYVYDVAKRM 265 (267)
T ss_pred HHHHHHHHhcCCCcccCCCH-HHHHHHHhhh
Confidence 89999999999999999999 8899988876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=295.62 Aligned_cols=219 Identities=22% Similarity=0.282 Sum_probs=173.7
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+|+..++||+|+||.||++... ++.||||++...... ....+.+|+.+++.++||||+.+++.+. +..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778889999999999999875 578999999754322 2345788999999999999999999884 46899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.++|+|||+..
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999888532 23468999999999999999999999 799999999999999999999999997432
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|++|++||........... +...+......++...+..+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE---VERRVKEDQEEYSEKFSEAAR 233 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH---HHHHhhhcccccCcccCHHHH
Confidence 23356789999999999999999999975433111000 001111112233445567899
Q ss_pred HHHHHhhccCCCCCCCh
Q 003033 738 NLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~ 754 (855)
+|+.+||..||.+||+.
T Consensus 234 ~li~~~l~~~P~~R~~~ 250 (285)
T cd05605 234 SICRQLLTKDPGFRLGC 250 (285)
T ss_pred HHHHHHccCCHHHhcCC
Confidence 99999999999999953
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=288.07 Aligned_cols=227 Identities=31% Similarity=0.473 Sum_probs=181.9
Q ss_pred cCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecC
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLP 604 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~ 604 (855)
..+|.+.++||+|+||.||+|.+.+ ..||+|.+.... .....|.+|+.++.+++||||+++++.+. +..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~ 83 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 83 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence 3468889999999999999998764 579999997543 24567999999999999999999999874 46789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++... ....+++..+..++.+++.||.|||+ .+|+||||||+|||++.++.+||+|||...
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 84 KGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 99999999532 23457999999999999999999999 799999999999999999999999997431
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+.++.++|||||||++|+|+| |.+||............. .. .....+...+..+.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~l~ 233 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RG----YRMPCPPECPESLH 233 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh--cC----CCCCCccccCHHHH
Confidence 1335678999999999999999 888996543322111110 00 00111234457799
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+|+.+||+.+|.+||++ .+++..|+..
T Consensus 234 ~li~~~l~~~p~~Rp~~-~~~~~~l~~~ 260 (262)
T cd05071 234 DLMCQCWRKEPEERPTF-EYLQAFLEDY 260 (262)
T ss_pred HHHHHHccCCcccCCCH-HHHHHHHHHh
Confidence 99999999999999999 8898888753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=291.79 Aligned_cols=228 Identities=24% Similarity=0.374 Sum_probs=180.4
Q ss_pred ccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
.+++|...+.||+|+||.||+|.+.. ..||+|.+...... ....|.+|+.+++.++||||+++++++. +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34678889999999999999998853 56899988654322 2346899999999999999999999874 45
Q ss_pred eEEEEEecCCCCHHHHhcccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC---cEEE
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKL 668 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~~KL 668 (855)
.++||||+++|+|.+++..... ...++|..++.++.||+.||.|||+ ++++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence 7899999999999999854321 2358999999999999999999999 7899999999999998654 6999
Q ss_pred eeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccc
Q 003033 669 SDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNL 720 (855)
Q Consensus 669 ~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 720 (855)
+|||+.. +..++.++|||||||++|+|++ |..||............
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~------ 234 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV------ 234 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH------
Confidence 9998532 2346778999999999999997 99999754432211110
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
.......+|...+..+.+++.+||..+|.+||++ .+|++.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~-~~vl~~l~ 276 (277)
T cd05036 235 TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF-ATILERIQ 276 (277)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHhh
Confidence 0111123344556789999999999999999999 77877764
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=291.48 Aligned_cols=219 Identities=25% Similarity=0.382 Sum_probs=175.3
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~ 605 (855)
|+....||.|+||.||+|... +..+++|.+..........|.+|+.+++.++||||++++++| .+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999886 467899998765444456788999999999999999999988 3467899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|..++.. ...++++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence 999988753 23468999999999999999999999 799999999999999999999999997431
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|++|++||................ .+ ....|...+..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~ 237 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---PP-TLAQPSRWSSE 237 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC---CC-CCCCccccCHH
Confidence 1224568999999999999999999997655443332221111 00 01112234567
Q ss_pred HHHHHHHhhccCCCCCCChHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+.+|+.+||..+|.+||++ .++
T Consensus 238 ~~~li~~~l~~~p~~Rp~~-~~i 259 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTT-TQL 259 (282)
T ss_pred HHHHHHHHccCChhhCcCH-HHH
Confidence 9999999999999999999 555
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=287.32 Aligned_cols=231 Identities=23% Similarity=0.357 Sum_probs=181.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~ 600 (855)
.+|...+.||+|+||.||+|... +..||||.+....... ...|.+|+.+++.++||||+++++++ .+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47888999999999999999874 6889999886533222 34688999999999999999999987 34678999
Q ss_pred EecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
||+++|+|.+++... .....++......++.+++.||.|||+ ++|+||||||+|||++.++.++|+|||+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999888432 223458889999999999999999999 79999999999999999999999999732
Q ss_pred --------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-HHHHHhhcccccccCCCCCCCChhhH
Q 003033 675 --------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 675 --------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
....++.++||||||+++|+|++|+.||..... ....... +.....+ ...+...+
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~ 234 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK--IEQCDYP--PLPTEHYS 234 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH--HhcCCCC--CCChhhcC
Confidence 123456789999999999999999999854321 1111111 1111111 11112345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
..+.+++.+||..+|.+||++ .+|++.|+.++
T Consensus 235 ~~~~~li~~cl~~~p~~Rp~~-~~vl~~~~~~~ 266 (267)
T cd08228 235 EKLRELVSMCIYPDPDQRPDI-GYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHHHCCCCcccCcCH-HHHHHHHHHhc
Confidence 779999999999999999999 89999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=289.57 Aligned_cols=224 Identities=29% Similarity=0.418 Sum_probs=178.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCc-ceeEeceec--C------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPN-LVTLVGACP--E------ 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~Hpn-IV~l~g~~~--~------ 594 (855)
..|....+||+|+||+||+|+.. +..||+|+++..... -+....+|+.+|+.|+|+| ||.|++++. +
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 35777788999999999999876 678999999876442 3456789999999999999 999999983 2
Q ss_pred ceEEEEEecCCCCHHHHhcccCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
.++||+||+. -+|.+++...... ..++...+..++.||+.||+|||+ ++|+||||||.|||++.+|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccch
Confidence 5789999994 6899998543321 357778899999999999999999 8999999999999999999999999983
Q ss_pred c--------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 003033 674 L--------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 674 ~--------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~ 727 (855)
+ ....|++..||||+|||++||+++++.|.+..+..+......+. -.|....
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l--GtP~e~~ 244 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL--GTPNEKD 244 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc--CCCCccC
Confidence 2 23458889999999999999999999999888876654432211 1122223
Q ss_pred CChh----------------------hH---HHHHHHHHHhhccCCCCCCChHHHH
Q 003033 728 WPFV----------------------QA---EQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 728 ~p~~----------------------~~---~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
||.. .+ ....+++.+|++++|.+|.++ +.+
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa-~~a 299 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISA-KGA 299 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCH-HHH
Confidence 3311 11 378899999999999999998 444
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=288.24 Aligned_cols=222 Identities=23% Similarity=0.386 Sum_probs=168.3
Q ss_pred eeeccCceEEEEEEEC----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||+|... ...+|+|.+...... ....|.+|+.+++.++||||++++|.|. +..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5899999999999753 246888887654322 2356889999999999999999999984 46889999999999
Q ss_pred HHHHhcccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc---------
Q 003033 608 LEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS--------- 676 (855)
Q Consensus 608 L~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~--------- 676 (855)
|.+++..... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999854322 2335678888999999999999999 7999999999999999999999999985311
Q ss_pred -------------------------CCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 003033 677 -------------------------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 677 -------------------------~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
..++.++|||||||++|||++ |.+||............ ......+.....++.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV-VREQDIKLPKPQLDL 237 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-hhccCccCCCCcccc
Confidence 123568999999999999999 78888654332211110 001111111222334
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
..+..+.+++..|| .||.+||++ ++|++.|
T Consensus 238 ~~~~~~~~~~~~~~-~dp~~Rpt~-~~v~~~l 267 (269)
T cd05042 238 KYSDRWYEVMQFCW-LDPETRPTA-EEVHELL 267 (269)
T ss_pred cCCHHHHHHHHHHh-cCcccccCH-HHHHHHh
Confidence 45577888998998 599999999 8887766
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=301.49 Aligned_cols=223 Identities=22% Similarity=0.327 Sum_probs=170.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~ 600 (855)
++|+..+.||+|+||.||++... +..||||++..... .....+.+|+.++.+++||||+++++.+.+ ..||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999875 57899999975422 223467889999999999999999999854 588999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 99999999999853 3468999999999999999999999 899999999999999999999999998642
Q ss_pred -------------------------------------------------------cCCCCcchhHHHHHHHHHHHHhCCC
Q 003033 676 -------------------------------------------------------SGELTPKSDVYSFGIILLRLLTGRP 700 (855)
Q Consensus 676 -------------------------------------------------------~~~~t~ksDVwSfGvvl~elltG~~ 700 (855)
...++.++|||||||++|||++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1235778999999999999999999
Q ss_pred CCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhc--cCCCCCCChHHHHHH
Q 003033 701 ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE--MSRKSRPELGKDVWR 760 (855)
Q Consensus 701 pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~--~dP~~RPs~~~evl~ 760 (855)
||..................+. ..... ..+..+.+|+.+++. .++..||++ ++++.
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~~-~p~~~--~~s~~~~~li~~l~~~~~~r~~r~~~-~ei~~ 292 (363)
T cd05628 235 PFCSETPQETYKKVMNWKETLI-FPPEV--PISEKAKDLILRFCCEWEHRIGAPGV-EEIKT 292 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCccc-CCCcC--CCCHHHHHHHHHHcCChhhcCCCCCH-HHHhC
Confidence 9976554332221111111000 01111 234567788877543 233356887 66643
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=289.47 Aligned_cols=224 Identities=27% Similarity=0.469 Sum_probs=180.0
Q ss_pred CCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.+|...+.||+|+||.||+|.+. ...+|+|.++..... ....|..|+.++.+++||||+++++++. +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999864 246999998754322 2457889999999999999999999883 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ...+++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 9999999999999533 2468999999999999999999999 799999999999999999999999997421
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|++++ |..||........ .+..+ .....
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~--------~~~~~ 230 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG--------YRLPA 230 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC--------CcCCC
Confidence 1345678999999999999886 9999965433221 11111 11122
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+...+..+.+++.+||+.+|.+||++ .++++.|+.+
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~~ 266 (267)
T cd05066 231 PMDCPAALHQLMLDCWQKDRNERPKF-EQIVSILDKL 266 (267)
T ss_pred CCCCCHHHHHHHHHHcccCchhCCCH-HHHHHHHHhh
Confidence 33445778999999999999999999 8898888754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=300.22 Aligned_cols=211 Identities=24% Similarity=0.291 Sum_probs=168.6
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||+|+||.||+|... +..||||+++... ......+..|..++..+ +||||+++++++. +..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999886 4679999997542 22344566788887754 8999999999873 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 82 DLMFHIQS---SGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 99998853 2458899999999999999999999 899999999999999999999999998432
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
+..++.++|||||||++|+|++|+.||...+......... ......|...+..+.+|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~-------~~~~~~~~~~~~~~~~ll~ 228 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL-------NDRPHFPRWISKEAKDCLS 228 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------cCCCCCCCCCCHHHHHHHH
Confidence 2346778999999999999999999997655432221111 1112234445678899999
Q ss_pred HhhccCCCCCCChHHHH
Q 003033 742 RCCEMSRKSRPELGKDV 758 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~ev 758 (855)
+||+.||.+||++..++
T Consensus 229 ~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 229 KLFERDPTKRLGVDGDI 245 (316)
T ss_pred HHccCCHHHcCCChHHH
Confidence 99999999999984454
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=286.56 Aligned_cols=221 Identities=26% Similarity=0.423 Sum_probs=181.3
Q ss_pred CCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCCC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 606 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~G 606 (855)
.+|...+.||+|+||.||+|...+..||+|.+.... ....|.+|+.++.+++||||+++++++. +..++||||+++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 357788899999999999999888999999986532 3467899999999999999999999884 4678999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++.... ...+++..+..++.|++.||.|||. ++++||||||+|||++.++.+||+|||+..
T Consensus 84 ~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 84 NLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 9999986432 3458899999999999999999998 799999999999999999999999997432
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
.+.++.++|||||||++|+|++ |++||....... .....+. ....+...+..+.+++.
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~ 231 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY--------RMEPPEGCPADVYVLMT 231 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC--------CCCCCCcCCHHHHHHHH
Confidence 2456778999999999999998 999996554322 1222111 11122344578999999
Q ss_pred HhhccCCCCCCChHHHHHHHHh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
+||..+|..||++ ++++..|+
T Consensus 232 ~~l~~~p~~Rp~~-~~l~~~l~ 252 (254)
T cd05083 232 SCWETEPKKRPSF-HKLREKLE 252 (254)
T ss_pred HHcCCChhhCcCH-HHHHHHHc
Confidence 9999999999999 78877765
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=305.85 Aligned_cols=216 Identities=22% Similarity=0.346 Sum_probs=167.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
+|+..++||+|+||.||+|.+. +..||||++...... ....|.+|+.+|+.++||||+++++++. +.+++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3556678999999999999876 588999999654322 2456889999999999999999999984 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc-------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS------- 676 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~------- 676 (855)
++|+|.... .+.+..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 155 ~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 155 DGGSLEGTH-------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred CCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999986542 24567788999999999999999 7999999999999999999999999985310
Q ss_pred -----------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCChh
Q 003033 677 -----------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 677 -----------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...+.++|||||||++|||++|+.||...... ......... ......+..
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 299 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-----SQPPEAPAT 299 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-----cCCCCCCCc
Confidence 01234799999999999999999999733211 111111000 011122334
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+.++.+|+.+||..||.+||++ .++++
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~-~ell~ 327 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSA-MQLLQ 327 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCH-HHHhc
Confidence 56789999999999999999999 66643
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-32 Score=286.16 Aligned_cols=219 Identities=26% Similarity=0.409 Sum_probs=176.1
Q ss_pred eeeccCceEEEEEEECC-----eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceecC-ceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||+|.+.. ..||||.+..... ...+.|.+|+.++++++||||+++++.+.+ ..++||||+++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS 81 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence 58999999999998742 3699999987655 445679999999999999999999998754 5789999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------ 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------ 675 (855)
|.+++..... ..++|.....++.|++.||.|||. ++++||||||+|||++.++.+||+|||+..
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 82 LLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred HHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 9999864332 468999999999999999999999 799999999999999999999999997421
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|+| |.+||.............. .......+...+..+.+
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 232 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK-----EGERLERPEACPQDIYN 232 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCcCCCCccCCHHHHH
Confidence 1245668999999999999999 9999965443332111111 01111123344578999
Q ss_pred HHHHhhccCCCCCCChHHHHHHHHh
Q 003033 739 LAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
++.+||..+|.+||++ .+++..|.
T Consensus 233 li~~~l~~~p~~Rps~-~~~~~~l~ 256 (257)
T cd05040 233 VMLQCWAHNPADRPTF-AALREFLP 256 (257)
T ss_pred HHHHHCCCCcccCCCH-HHHHHHhc
Confidence 9999999999999999 77877664
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=292.18 Aligned_cols=233 Identities=28% Similarity=0.483 Sum_probs=180.5
Q ss_pred cCCccccceeeccCceEEEEEEECC------------------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCccee
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH------------------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVT 587 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~------------------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~ 587 (855)
..+|...+.||+|+||.||++.... ..||+|.+...... ....|.+|+.+|.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999987642 45899998765322 3457889999999999999999
Q ss_pred Eeceec--CceEEEEEecCCCCHHHHhcccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCc
Q 003033 588 LVGACP--EVWTLVYEYLPNGSLEDRLSCKD--------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657 (855)
Q Consensus 588 l~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~N 657 (855)
++++|. +..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence 999984 46889999999999999985432 12368999999999999999999998 799999999999
Q ss_pred eeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh--CCCCCCCchHH
Q 003033 658 ILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT--GRPALGITKEV 708 (855)
Q Consensus 658 ILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt--G~~pf~~~~~~ 708 (855)
||++.++.+||+|||+.. .+.++.++|||||||++|+|++ |.+||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 999999999999998432 1345778999999999999998 67888654322
Q ss_pred HHHHhhccc-ccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 709 QYALDTGKL-KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 709 ~~~~~~~~~-~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
......... ...........+...+.++.+|+.+||+.||.+||++ .+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~-~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTF-REIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCH-HHHHHHhc
Confidence 211111111 0000111112233445789999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=293.12 Aligned_cols=225 Identities=28% Similarity=0.514 Sum_probs=180.2
Q ss_pred cCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
.++|+....||+|+||.||++... +..||+|++..... .....|.+|+.++.+++||||++++++|. +..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888999999999999999763 36799999875432 22456889999999999999999999984 357
Q ss_pred EEEEEecCCCCHHHHhcccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCc
Q 003033 597 TLVYEYLPNGSLEDRLSCKD-------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~-------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~N 657 (855)
++||||+++|+|.+++.... ....+++..++.++.+++.||.|||. ++++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 89999999999999985321 12357899999999999999999999 799999999999
Q ss_pred eeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH
Q 003033 658 ILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ 709 (855)
Q Consensus 658 ILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~ 709 (855)
||++.++.+||+|||+.. ...++.++|||||||++|+|++ |..||.......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999998431 1345678999999999999998 888875433222
Q ss_pred --HHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 710 --YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 710 --~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
..+..+.. ..+|...+..+.+|+.+||..+|.+||++ .+++..|+
T Consensus 241 ~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~el~~~l~ 287 (288)
T cd05050 241 VIYYVRDGNV--------LSCPDNCPLELYNLMRLCWSKLPSDRPSF-ASINRILQ 287 (288)
T ss_pred HHHHHhcCCC--------CCCCCCCCHHHHHHHHHHcccCcccCCCH-HHHHHHhh
Confidence 11222211 12233455789999999999999999999 78888876
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=299.22 Aligned_cols=175 Identities=24% Similarity=0.384 Sum_probs=149.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.++|+..++||+|+||.||++... +..+|+|.+...... ....|.+|+++|.+++||||++++++|. +..+||||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999886 577999998764221 2356889999999999999999999983 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++.. ...+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 9999999999853 34588999999999999999999972 369999999999999999999999997431
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITK 706 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~ 706 (855)
+..++.++|||||||++|+|++|+.||....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~ 206 (333)
T cd06650 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPD 206 (333)
T ss_pred cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcc
Confidence 2346778999999999999999999996443
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=321.39 Aligned_cols=222 Identities=27% Similarity=0.462 Sum_probs=187.2
Q ss_pred ccccceeeccCceEEEEEEEC--C---eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~---~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..+.+.||.|.||.||+|.++ + ..||||.|+..... ...+|+.|+.||.++.||||++|-|+.. ....||.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 345678999999999999886 2 56999999976443 3568999999999999999999999984 35779999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
||+||+|+.+|..++ ..+++.+...++++|+.|+.||-+ +++|||||...|||++.+.++|++|||+.
T Consensus 711 yMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 711 YMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 999999999997554 459999999999999999999999 89999999999999999999999999853
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCCCh
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
....+|.+||||||||||||.++ |..||..... +-.+++. ..+.+-|+
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~--------gyRLPpPm 857 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQ--------GYRLPPPM 857 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHh--------ccCCCCCC
Confidence 23457889999999999999876 8888864332 2223333 23334577
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+++..|..|++.||++|..+||.+ .+|+..|+.+
T Consensus 858 DCP~aL~qLMldCWqkdR~~RP~F-~qiV~~lDkl 891 (996)
T KOG0196|consen 858 DCPAALYQLMLDCWQKDRNRRPKF-AQIVSTLDKL 891 (996)
T ss_pred CCcHHHHHHHHHHHHHHhhcCCCH-HHHHHHHHHH
Confidence 788999999999999999999999 7899999987
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=286.69 Aligned_cols=220 Identities=26% Similarity=0.456 Sum_probs=172.0
Q ss_pred eeeccCceEEEEEEEC-----CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec---CceEEEEEecCC
Q 003033 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEYLPN 605 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV~Ey~~~ 605 (855)
.||+|+||.||+|.+. ...||||.+.... ......|.+|+.+++.++||||++++++|. ...++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5899999999999863 2569999986432 223457889999999999999999999773 247899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++... ...+++.....++.+++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 82 GDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 9999998532 2346788889999999999999999 799999999999999999999999998532
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|||++ |.+||............ ........+...+..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 230 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL------LQGRRLLQPEYCPDP 230 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH------hcCCCCCCCCcCCHH
Confidence 1234668999999999999999 56777544332211111 011111123334567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+.+++.+||..+|.+||++ .+++..|+.+.
T Consensus 231 ~~~li~~cl~~~p~~Rp~~-~~il~~l~~~~ 260 (262)
T cd05058 231 LYEVMLSCWHPKPEMRPTF-SELVSRIEQIF 260 (262)
T ss_pred HHHHHHHHcCCChhhCCCH-HHHHHHHHHHh
Confidence 9999999999999999999 88999888763
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=293.55 Aligned_cols=215 Identities=24% Similarity=0.415 Sum_probs=179.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
..+|++.+.||+|.||.|-++..+ ++.||||.++++...+ .-.+.+||+||+.|+||||+.+|.+|. +...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 357888999999999999999764 7899999998875444 446789999999999999999999995 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
|||..+|.|+|++..+ ..|+......+++||..|+.|+|. ++++|||||.+|||||.|+++||+|||+.
T Consensus 132 MEYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 9999999999999644 469999999999999999999999 89999999999999999999999999831
Q ss_pred -------------------ccCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhh
Q 003033 675 -------------------ASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 675 -------------------~~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~ 732 (855)
.+.+| ++.+|-|||||+||-|+.|.-||++.+.-... +..|.... ...
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE----------P~~ 275 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE----------PET 275 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC----------CCC
Confidence 12223 56799999999999999999999987764432 23333221 122
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+....-|+.+||-.||.+|-|+ .+|
T Consensus 276 PSdA~gLIRwmLmVNP~RRATi-eDi 300 (668)
T KOG0611|consen 276 PSDASGLIRWMLMVNPERRATI-EDI 300 (668)
T ss_pred CchHHHHHHHHHhcCcccchhH-HHH
Confidence 3557889999999999999998 444
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=308.56 Aligned_cols=216 Identities=27% Similarity=0.412 Sum_probs=180.6
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~E 601 (855)
-|...+.||.|+.|.|-.|++. |..+|||++.+... .....+.+||-||+-|.|||+++||+++.+ .+|||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 4777888999999999999875 78899999987632 224568899999999999999999999954 6899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
|+++|.|+++|-.+ ++|+.....+++.||+.|+.|+|. .+|+||||||+|+|||.++++||+|||++
T Consensus 93 yv~gGELFdylv~k---G~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 93 YVPGGELFDYLVRK---GPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred ecCCchhHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 99999999999543 568999999999999999999999 78999999999999999999999999843
Q ss_pred -----------------ccCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHH
Q 003033 675 -----------------ASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 675 -----------------~~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
.+..| +.++||||.|||||.||||+.||+..+-.. ..+..|.+ ..|...+.
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f---------~MPs~Is~ 237 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF---------EMPSNISS 237 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc---------cCCCcCCH
Confidence 22233 568999999999999999999998554332 22334443 34556678
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+..+|+.+|+..||.+|.++ ++|++
T Consensus 238 eaQdLLr~ml~VDp~~RiT~-~eI~k 262 (786)
T KOG0588|consen 238 EAQDLLRRMLDVDPSTRITT-EEILK 262 (786)
T ss_pred HHHHHHHHHhccCccccccH-HHHhh
Confidence 89999999999999999999 66643
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=301.17 Aligned_cols=226 Identities=26% Similarity=0.384 Sum_probs=178.8
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec---Cc
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---EV 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~---~~ 595 (855)
++|...+.||+|+||.||+|.+. ++.||||+++..... ....+.+|+.+|.++ +||||++++++|. ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 46888999999999999999742 467999999764322 234688999999999 6899999999883 24
Q ss_pred eEEEEEecCCCCHHHHhcccCC----------------------------------------------------------
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------- 617 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------- 617 (855)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999999853210
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------------
Q 003033 618 ------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------------- 675 (855)
Q Consensus 618 ------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------------- 675 (855)
...++|..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 1247889999999999999999999 899999999999999999999999998432
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH---HHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV---QYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~---~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++ |.+||...... ...+..+.. ...|...+..+.+++
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 315 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--------MRAPDYTTPEMYQTM 315 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC--------CCCCCCCCHHHHHHH
Confidence 1335678999999999999997 99998643321 111111111 111222346799999
Q ss_pred HHhhccCCCCCCChHHHHHHHHhhh
Q 003033 741 MRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+||+.+|.+||++ .+|++.|+.+
T Consensus 316 ~~cl~~~p~~Rps~-~eil~~l~~~ 339 (343)
T cd05103 316 LDCWHGEPSQRPTF-SELVEHLGNL 339 (343)
T ss_pred HHHccCChhhCcCH-HHHHHHHHHH
Confidence 99999999999999 8899988876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=303.90 Aligned_cols=221 Identities=26% Similarity=0.314 Sum_probs=177.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||||++..... .....+..|+.+|..++||||+++++++. +..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999887 68899999975421 23456889999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ..+++.....++.||+.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999533 468999999999999999999999 899999999999999999999999998532
Q ss_pred -------------------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch
Q 003033 676 -------------------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK 706 (855)
Q Consensus 676 -------------------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~ 706 (855)
...++.++|||||||+||+|++|++||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 1235678999999999999999999997665
Q ss_pred HHHHHHhhccccc-ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCC-hHHHHHH
Q 003033 707 EVQYALDTGKLKN-LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE-LGKDVWR 760 (855)
Q Consensus 707 ~~~~~~~~~~~~~-~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs-~~~evl~ 760 (855)
............. ...+.. ...+..+.+|+.+|+. ||.+||+ + ++++.
T Consensus 235 ~~~~~~~i~~~~~~~~~p~~----~~~~~~~~~li~~ll~-dp~~R~~s~-~~ll~ 284 (350)
T cd05573 235 LQETYNKIINWKESLRFPPD----PPVSPEAIDLICRLLC-DPEDRLGSF-EEIKS 284 (350)
T ss_pred HHHHHHHHhccCCcccCCCC----CCCCHHHHHHHHHHcc-ChhhcCCCH-HHHhc
Confidence 4332221111101 111111 1145789999999997 9999999 6 66643
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=310.56 Aligned_cols=217 Identities=24% Similarity=0.297 Sum_probs=181.9
Q ss_pred hcccCCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCC---ChhhHHHHHHHHHhcC-CCcceeEeceec--Cc
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKIR-HPNLVTLVGACP--EV 595 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~ 595 (855)
....++|..+..||+|.||+|+++.+++ ..+|||++++...- +.+....|..|+.... ||.|+.|+..|+ ++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 3456789999999999999999998875 67999999987543 3456778999988885 999999999994 68
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-- 673 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-- 673 (855)
+|.||||+.||++..+. ....++......|+.+|+.||.|||. ++|||||||.+|||||.+|++||+|||+
T Consensus 444 l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred EEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEeccccccc
Confidence 99999999999954433 33468999999999999999999999 8999999999999999999999999973
Q ss_pred -----------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 003033 674 -----------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 674 -----------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
+....|+..+|+|||||+||||++|.+||.+.++.+..-.. -.....+|.
T Consensus 517 e~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI-------~~d~~~yP~ 589 (694)
T KOG0694|consen 517 EGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI-------VNDEVRYPR 589 (694)
T ss_pred ccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-------hcCCCCCCC
Confidence 34566899999999999999999999999877764421111 112234677
Q ss_pred hhHHHHHHHHHHhhccCCCCCCCh
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..+.+...|+.++|..+|.+|--+
T Consensus 590 ~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 590 FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred cccHHHHHHHHHHhccCcccccCC
Confidence 788999999999999999999876
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=299.58 Aligned_cols=211 Identities=22% Similarity=0.272 Sum_probs=168.7
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHH---HhcCCCcceeEeceec--CceEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDIL---SKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL---~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
|...+.||+|+||.||+|... +..||||+++... ......+.+|+.++ +.++||||+++++++. +..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999876 5789999997542 12234567777665 4667999999999884 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|..++.. ..+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999988742 358999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|++|++||.............. ....+|...+.
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~-------~~~~~p~~~~~ 226 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN-------DEVRYPRFLSR 226 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-------CCCCCCCCCCH
Confidence 23457789999999999999999999976544322111100 01123444567
Q ss_pred HHHHHHHHhhccCCCCCCCh
Q 003033 735 QLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+.+|+.+||..||.+||+.
T Consensus 227 ~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 227 EAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred HHHHHHHHHhhcCHhHcCCC
Confidence 89999999999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=307.72 Aligned_cols=219 Identities=22% Similarity=0.283 Sum_probs=171.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...++||+|+||.||++... +..||||++..... .....+.+|+.+|.+++|||||+++++|. +..||||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999875 57899999865321 22456888999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999999999853 3468888999999999999999999 799999999999999999999999998542
Q ss_pred -------------------------------------------------------------------cCCCCcchhHHHH
Q 003033 676 -------------------------------------------------------------------SGELTPKSDVYSF 688 (855)
Q Consensus 676 -------------------------------------------------------------------~~~~t~ksDVwSf 688 (855)
...++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 1235778999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh--hhHHHHHHHHHHhhccCCCCC---CChHHHHH
Q 003033 689 GIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF--VQAEQLANLAMRCCEMSRKSR---PELGKDVW 759 (855)
Q Consensus 689 Gvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~--~~~~~l~~L~~~Cl~~dP~~R---Ps~~~evl 759 (855)
||++|||+||.+||................. . ..+|. ..+..+.+|+.+|+. +|.+| |++ .+++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~---~--~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~-~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWRE---T--LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGA-HEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccCC---c--cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH-HHHh
Confidence 9999999999999976554322111111111 1 11121 245678999999997 67665 476 4443
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-33 Score=296.46 Aligned_cols=221 Identities=27% Similarity=0.389 Sum_probs=172.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec----C---ceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----E---VWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~---~~~ 597 (855)
+-.|...+++|.|+||.||+|.+. +..||||....+. +--.+|+++|+++.|||||+|+.+|. . ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 335777889999999999999887 4789999986543 22347999999999999999988872 2 245
Q ss_pred EEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeecc---
Q 003033 598 LVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFE--- 672 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg--- 672 (855)
|||||||. +|...+... .....++.-.+.-+..||++||.|||+ .+|+||||||.|||+|.+ |.+||||||
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999985 888888531 223456667778899999999999999 799999999999999976 999999998
Q ss_pred ----------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc------------
Q 003033 673 ----------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK------------ 718 (855)
Q Consensus 673 ----------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~------------ 718 (855)
++....|+.+.||||.|||+.||+-|+|.|.+.+.+.+....-++.
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 2345679999999999999999999999998877665544321111
Q ss_pred ----cccCC--CCCC----CChhhHHHHHHHHHHhhccCCCCCCChH
Q 003033 719 ----NLLDP--LAGD----WPFVQAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 719 ----~~~d~--~~~~----~p~~~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
....+ .... +....+.++.+|+.+++.++|.+|.+..
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~ 301 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSAL 301 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHH
Confidence 00001 1122 2334567899999999999999999983
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-32 Score=293.46 Aligned_cols=232 Identities=28% Similarity=0.478 Sum_probs=177.4
Q ss_pred CCccccceeeccCceEEEEEEEC------------------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL 588 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~------------------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l 588 (855)
++|+..++||+|+||.||++... ...||+|++...... ....|.+|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999987542 235899999754322 34578999999999999999999
Q ss_pred eceec--CceEEEEEecCCCCHHHHhcccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCce
Q 003033 589 VGACP--EVWTLVYEYLPNGSLEDRLSCKDN--------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658 (855)
Q Consensus 589 ~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NI 658 (855)
++++. +..++||||+++|+|.+++..... ...+++.....++.|++.||.|||+ ++|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence 99883 468899999999999999854321 1247888999999999999999999 7999999999999
Q ss_pred eeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh--CCCCCCCchHHH
Q 003033 659 LLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQ 709 (855)
Q Consensus 659 Lld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt--G~~pf~~~~~~~ 709 (855)
|++.++.+||+|||+.. .+.++.++|||||||++|||++ |..||.......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999998532 1235678999999999999998 678886443322
Q ss_pred HHHhhccc-ccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 710 YALDTGKL-KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 710 ~~~~~~~~-~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
.....+.+ ..........-+...+..+.+|+.+||..||.+||++ .+|.+.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~i~~~l~ 295 (296)
T cd05095 242 VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF-QEIHATLL 295 (296)
T ss_pred HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHHh
Confidence 11111110 0000000011122344789999999999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-32 Score=287.76 Aligned_cols=213 Identities=27% Similarity=0.421 Sum_probs=167.5
Q ss_pred eeeccCceEEEEEEEC--------------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 535 KIGEGGYGSIYKGLLR--------------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--------------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.||+|+||.||+|.+. ...|++|.+..........|..|+.++..++||||++++++|. ...++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 5899999999999753 2358999987655444567889999999999999999999984 35789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc-------EEEeec
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-------SKLSDF 671 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-------~KL~DF 671 (855)
||||+++|+|..++... ..++++..+..++.||+.||.|||+ ++|+||||||.|||++.++. +|++||
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 82 VEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 99999999999888532 3468999999999999999999999 89999999999999987654 899999
Q ss_pred cccc----------------------cCCCCcchhHHHHHHHHHHHH-hCCCCCCCchHHHHH-HhhcccccccCCCCCC
Q 003033 672 EFLA----------------------SGELTPKSDVYSFGIILLRLL-TGRPALGITKEVQYA-LDTGKLKNLLDPLAGD 727 (855)
Q Consensus 672 g~~~----------------------~~~~t~ksDVwSfGvvl~ell-tG~~pf~~~~~~~~~-~~~~~~~~~~d~~~~~ 727 (855)
|+.. ...++.++|||||||++|+|+ +|.+||......... +..+.. ..
T Consensus 157 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-----~~--- 228 (262)
T cd05077 157 GIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQC-----ML--- 228 (262)
T ss_pred CCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCc-----cC---
Confidence 7421 234677899999999999997 588888644322111 111111 01
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
.......+.+|+.+||+.||.+||++ .++++.|
T Consensus 229 -~~~~~~~~~~li~~cl~~dp~~Rp~~-~~il~~~ 261 (262)
T cd05077 229 -VTPSCKELADLMTHCMNYDPNQRPFF-RAIMRDI 261 (262)
T ss_pred -CCCChHHHHHHHHHHcCCChhhCcCH-HHHHHhc
Confidence 11224678999999999999999999 7787665
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=289.00 Aligned_cols=226 Identities=26% Similarity=0.349 Sum_probs=174.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|...+.||.|+||.||+|... +..||||.+...... ....+.+|+.++..++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999875 578999998754322 2456889999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++ |+|.+++........+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 6898888544444578999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc----c--------------cc
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG----K--------------LK 718 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~----~--------------~~ 718 (855)
...++.++|||||||++|+|+||++||............. . ..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 1234678999999999999999999997654432221110 0 00
Q ss_pred cccC----CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 NLLD----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ~~~d----~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+ ..........+.++.+|+.+||+.||.+||++ .+|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-~~ll 280 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISA-KKAL 280 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCH-HHHh
Confidence 0000 00000111235678899999999999999999 6664
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=288.04 Aligned_cols=221 Identities=27% Similarity=0.483 Sum_probs=174.2
Q ss_pred eeeccCceEEEEEEECC----eEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||+|+||.||+|.+.. ..+|+|.++.... .....|.+|+.++.++ +||||++++++|. +..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999998753 3578898874322 2345788999999999 7999999999984 3578999999999
Q ss_pred CHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 607 SLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 607 sL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
+|.+++.... ....+++..+..++.+++.||.|||+ ++++||||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999985422 12358899999999999999999998 7999999999999999999999999985
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
.. ...++.++|||||||++|+|++ |.+||............ ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~------~~~~~~~~ 232 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL------PQGYRLEK 232 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH------hCCCCCCC
Confidence 41 2335678999999999999997 99999654332211110 01111112
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+...+..+.+|+.+||..+|.+||++ .+++..|+.+
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~-~~il~~l~~~ 268 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRM 268 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCH-HHHHHHHHHh
Confidence 22345679999999999999999999 7888888765
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-32 Score=288.09 Aligned_cols=228 Identities=25% Similarity=0.370 Sum_probs=182.8
Q ss_pred CCccccceeeccCceEEEEEEECC-----eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~ 600 (855)
.+|...++||+|+||.||+|.+.. ..||||...... ....+.|.+|+.++++++||||++++++|. +..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 457788899999999999998643 368999987554 223457899999999999999999999884 4578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ...+++..+..++.+++.||.|||+ .+++||||||+|||++.++.+||+|||+..
T Consensus 86 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 86 ELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 999999999999532 2358999999999999999999998 799999999999999999999999997421
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
...++.++|||||||++|+|++ |.+||................. ...|...+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~ 234 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER------LPMPPNCP 234 (270)
T ss_pred cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc------CCCCCCCC
Confidence 1235678999999999999986 9999976544332222111111 11233445
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..+.+++.+||..+|.+||++ .+++..|+.+..
T Consensus 235 ~~~~~li~~~l~~~P~~Rpt~-~~~~~~l~~~~~ 267 (270)
T cd05056 235 PTLYSLMTKCWAYDPSKRPRF-TELKAQLSDILQ 267 (270)
T ss_pred HHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHh
Confidence 789999999999999999999 889999887643
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=286.86 Aligned_cols=225 Identities=27% Similarity=0.377 Sum_probs=177.8
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec-------
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP------- 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~------- 593 (855)
..+++.|+..+.||+|+||.||+|... +..||+|.+.... .....+.+|+.++.++ +||||++++++|.
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 345677889999999999999999875 5789999987543 3456788999999999 6999999999873
Q ss_pred -CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
...++||||+++|+|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCC
Confidence 2478999999999999998642 23468999999999999999999999 799999999999999999999999997
Q ss_pred ccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 003033 673 FLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 722 (855)
Q Consensus 673 ~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d 722 (855)
+.. ...++.++|||||||++|+|++|.+||.............. .
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-----~ 231 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-----N 231 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-----C
Confidence 421 12356689999999999999999999965443322221111 0
Q ss_pred CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.....+...+..+.+|+.+||..+|.+||++ .+++
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~il 267 (272)
T cd06637 232 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTT-EQLM 267 (272)
T ss_pred CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCH-HHHh
Confidence 00001111234678999999999999999999 6664
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.6e-32 Score=294.25 Aligned_cols=231 Identities=23% Similarity=0.387 Sum_probs=182.9
Q ss_pred cCCccccceeeccCceEEEEEEEC---------CeEEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
.++|.....||+|+||.||++... +..||+|.+.... ......+.+|+.++..+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888899999999999999752 2469999987542 22346788999999999 8999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
...++||||+++|+|.+++..... ...++|..+..++.||+.||.|||+ ++|+||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence 357899999999999999864321 2358899999999999999999999 799999999999999
Q ss_pred CCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHH
Q 003033 661 DANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL 712 (855)
Q Consensus 661 d~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~ 712 (855)
+.++.+||+|||+.. ...++.++|||||||++|+|++ |.+||..........
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 250 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 250 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 999999999997421 2335778999999999999998 788886554332211
Q ss_pred hhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 713 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 713 ~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
... .......+...+..+.+|+.+||..+|.+||++ .++++.|+.+..
T Consensus 251 ~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~e~l~~l~~~~~ 298 (304)
T cd05101 251 LLK------EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTF-KQLVEDLDRILT 298 (304)
T ss_pred HHH------cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCH-HHHHHHHHHHHH
Confidence 110 001111233456789999999999999999999 899999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-32 Score=307.78 Aligned_cols=215 Identities=21% Similarity=0.296 Sum_probs=169.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.|...++||+|+||.||+|... +..||||++..... .....+.+|+.+|.+++|||||++++.|. +..+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999875 57899999975422 12346889999999999999999999984 46899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
||++|+|.+++... ..+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 99999999998532 458888899999999999999999 799999999999999999999999999631
Q ss_pred ------------------------------------------------------------------cCCCCcchhHHHHH
Q 003033 676 ------------------------------------------------------------------SGELTPKSDVYSFG 689 (855)
Q Consensus 676 ------------------------------------------------------------------~~~~t~ksDVwSfG 689 (855)
...++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 12356789999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCC
Q 003033 690 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 690 vvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs 753 (855)
|+||||++|++||................. ..........+.++.+|+.+|+ .+|.+|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQT---SLHIPPQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCC---CcCCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 999999999999986654433222211111 0111111234567888888875 59999997
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-32 Score=291.86 Aligned_cols=211 Identities=22% Similarity=0.302 Sum_probs=167.5
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||+|+||.||++... +..||||.+...... ....+..|+.+|+.++||||+++++++. ...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999875 578999998754322 2346788999999999999999999874 458899999999999
Q ss_pred HHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------
Q 003033 609 EDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------ 675 (855)
Q Consensus 609 ~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------ 675 (855)
.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 9887432 234568999999999999999999999 799999999999999999999999997531
Q ss_pred -------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 -------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 -------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|+.||...... ....... +.. ....+|...+..+.+|+
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~li 232 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----ILN-DSVTYPDKFSPASKSFC 232 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh----hcc-cCCCCcccCCHHHHHHH
Confidence 234577899999999999999999999654321 1111111 111 11133445667899999
Q ss_pred HHhhccCCCCCCCh
Q 003033 741 MRCCEMSRKSRPEL 754 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~ 754 (855)
.+||+.||.+||++
T Consensus 233 ~~~l~~~P~~R~~~ 246 (280)
T cd05608 233 EALLAKDPEKRLGF 246 (280)
T ss_pred HHHhcCCHHHhcCC
Confidence 99999999999965
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.4e-32 Score=294.18 Aligned_cols=256 Identities=24% Similarity=0.435 Sum_probs=191.3
Q ss_pred CCccccceeeccCceEEEEEEEC--C----eEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
.+|...+.||+|+||.||+|.+. + ..||+|.+....... ...|.+|+.+++.++||||++++|+|. ...+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 46778889999999999999864 3 357999887543222 346889999999999999999999984 456799
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
+||+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 87 ~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence 9999999999998532 3358899999999999999999999 799999999999999999999999997432
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|||++ |..||..... ....+..+.. .+ .+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~----~~----~~ 233 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER----LP----QP 233 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----CC----CC
Confidence 1234668999999999999997 8899865432 2222221110 01 12
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcCCCCCCccCCCCCCCCCCCCcCCCcchhccc
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQ 799 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~P~~f~CPI~qEvm~ 799 (855)
...+..+.+++.+||..+|.+||++ .+++..|..+....... ..+...++...|.....|++++.|.
T Consensus 234 ~~~~~~~~~li~~c~~~~p~~Rp~~-~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (303)
T cd05110 234 PICTIDVYMVMVKCWMIDADSRPKF-KELAAEFSRMARDPQRY--LVIQGDDRMKLPSPNDSKFFQNLLD 300 (303)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHhchhhh--eeeccCCcCCCCCCchhhHHhcccc
Confidence 2234678999999999999999999 78888888764322111 1122233344555555566666554
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-32 Score=307.18 Aligned_cols=219 Identities=22% Similarity=0.297 Sum_probs=172.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+|...+.||+|+||.||++... +..||||++.... ......+.+|+.+|.+++||||+++++.+. +..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999876 5789999986532 123456889999999999999999999884 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++.. ...++......++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++.
T Consensus 82 ~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999853 2458888889999999999999999 899999999999999999999999999631
Q ss_pred --------------------------------------------------------------cCCCCcchhHHHHHHHHH
Q 003033 676 --------------------------------------------------------------SGELTPKSDVYSFGIILL 693 (855)
Q Consensus 676 --------------------------------------------------------------~~~~t~ksDVwSfGvvl~ 693 (855)
...++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 123567899999999999
Q ss_pred HHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCC---ChHHHH
Q 003033 694 RLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP---ELGKDV 758 (855)
Q Consensus 694 elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RP---s~~~ev 758 (855)
+|++|++||................... ........+..+.+|+.+|+ .+|.+|+ ++ .++
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~-~el 298 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTL---HIPSQAKLSREASDLILRLC-CGAEDRLGKNGA-DEI 298 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccc---cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCH-HHH
Confidence 9999999997665433222211111111 11111234567888888876 5999999 55 444
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-32 Score=298.84 Aligned_cols=212 Identities=25% Similarity=0.322 Sum_probs=169.0
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||+|... +..||||+++... ......+..|..++..+ +||||+++++++. +..+|||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999886 4679999997642 12345567788888865 8999999999884 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 999999853 2458899999999999999999999 899999999999999999999999998432
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|++||............. . ....+|...+..+.+|+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~-~------~~~~~~~~~~~~~~~li 227 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR-M------DNPCYPRWLTREAKDIL 227 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-h------CCCCCCccCCHHHHHHH
Confidence 2346778999999999999999999997654322111110 0 01122333457789999
Q ss_pred HHhhccCCCCCCChHHHH
Q 003033 741 MRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~ev 758 (855)
.+||..||.+||++..++
T Consensus 228 ~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 228 VKLFVREPERRLGVKGDI 245 (316)
T ss_pred HHHhccCHhhcCCChHHH
Confidence 999999999999995444
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=292.11 Aligned_cols=231 Identities=27% Similarity=0.448 Sum_probs=180.0
Q ss_pred CccccceeeccCceEEEEEEEC------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC----ceE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE----VWT 597 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~~ 597 (855)
.|...+.||+|+||.||+|.+. +..||||++...... ....|.+|+.+++.++||||+++++++.. ..+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 5677789999999999999864 468999999865442 35679999999999999999999998843 578
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+++|+|.+++... ...+++..+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||...
T Consensus 85 lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 999999999999999532 2358999999999999999999999 799999999999999999999999997432
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH--------hhccccccc
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--------DTGKLKNLL 721 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~--------~~~~~~~~~ 721 (855)
...++.++|||||||++|+|+||..|+.......... ....+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 1234567999999999999999998875322111000 000000000
Q ss_pred C-CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 722 D-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 722 d-~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
. ......+...+..+.+|+.+||..+|.+||++ .+|++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~~~l~~i 283 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSF-ADLILIVDRL 283 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCH-HHHHHHHhhc
Confidence 0 01111122344779999999999999999999 8999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-32 Score=303.30 Aligned_cols=215 Identities=21% Similarity=0.262 Sum_probs=166.8
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||++... +..||||+++.... .....+.+|+.++..+ +||||++++++|. +..+|||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999876 57899999986432 2235688999999998 6999999999984 468999999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 999988843 2468999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|+||++||....... .......+...+.......|...+..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 234 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASS 234 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 2345678999999999999999999996321100 00000000000001111234445678999
Q ss_pred HHHHhhccCCCCCCCh
Q 003033 739 LAMRCCEMSRKSRPEL 754 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~ 754 (855)
|+.+||..||.+||+.
T Consensus 235 li~~~L~~dP~~R~~~ 250 (329)
T cd05588 235 VLKGFLNKDPKERLGC 250 (329)
T ss_pred HHHHHhccCHHHcCCC
Confidence 9999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=286.06 Aligned_cols=221 Identities=24% Similarity=0.383 Sum_probs=169.9
Q ss_pred eeeccCceEEEEEEECC----eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||+|.+.+ ..+|+|.++..... ....|.+|+.++++++||||++++|+|.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998643 46999998765422 23478899999999999999999999843 5789999999999
Q ss_pred HHHHhcccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc---------
Q 003033 608 LEDRLSCKD--NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS--------- 676 (855)
Q Consensus 608 L~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~--------- 676 (855)
|.+++.... ....+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999985432 22356778888999999999999999 7999999999999999999999999984310
Q ss_pred -------------------------CCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHh--hcccccccCCCCCCC
Q 003033 677 -------------------------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALD--TGKLKNLLDPLAGDW 728 (855)
Q Consensus 677 -------------------------~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~--~~~~~~~~d~~~~~~ 728 (855)
..++.++|||||||++|||++ |++||........... .+......+ +..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~ 235 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK---PRL 235 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC---Ccc
Confidence 013668999999999999996 9999965443322111 111111111 112
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
....+..+.+++.+|| .+|.+||++ ++|+..|.
T Consensus 236 ~~~~~~~~~~l~~~c~-~~P~~Rpt~-~~l~~~l~ 268 (269)
T cd05087 236 KLPLSDRWYEVMQFCW-LQPEQRPSA-EEVHLLLS 268 (269)
T ss_pred CCCCChHHHHHHHHHh-cCcccCCCH-HHHHHHhc
Confidence 2234567889999999 689999999 88887764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=282.19 Aligned_cols=217 Identities=27% Similarity=0.452 Sum_probs=173.9
Q ss_pred eeeccCceEEEEEEEC-CeEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCHHH
Q 003033 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED 610 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL~~ 610 (855)
+||+|+||.||+|... +..||+|.++...... ...|.+|+.++..++||||++++++|. +..++||||+++|+|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 6899999999999875 4779999987543222 346889999999999999999999984 46789999999999999
Q ss_pred HhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------------
Q 003033 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------------- 675 (855)
Q Consensus 611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------------- 675 (855)
++... ...+++..+..++.+++.||.|||. ++++||||||+||+++.++.+||+|||+..
T Consensus 82 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 82 FLRKK--KDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 88532 3458999999999999999999998 799999999999999999999999997431
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHh
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~C 743 (855)
.+.++.++|||||||++|+|++ |..||............... .....+...+..+.+|+.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~ 230 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG------YRMSCPQKCPDDVYKVMQRC 230 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCCHHHHHHHHHH
Confidence 2345668999999999999998 99999654433221111110 11122334557899999999
Q ss_pred hccCCCCCCChHHHHHHHHh
Q 003033 744 CEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 744 l~~dP~~RPs~~~evl~~L~ 763 (855)
|..+|.+||++ .++++.|.
T Consensus 231 l~~~p~~Rp~~-~~l~~~l~ 249 (250)
T cd05085 231 WDYKPENRPKF-SELQKELA 249 (250)
T ss_pred cccCcccCCCH-HHHHHHhc
Confidence 99999999999 78877764
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=293.12 Aligned_cols=230 Identities=24% Similarity=0.395 Sum_probs=180.7
Q ss_pred ccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--C
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~ 594 (855)
..++|...+.||+|+||.||++... +..||||.++.... .....|.+|+.+++++ +||||++++++|. +
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3457888999999999999999752 24799999875432 2245688999999999 7999999999984 4
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||+++|+|.+++.... ...+++.++..++.+++.||.|||+ ++|+|+||||+|||++.++.+||+|||+.
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccc
Confidence 6889999999999999985432 2348999999999999999999999 79999999999999999999999999743
Q ss_pred c---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCC
Q 003033 675 A---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG 726 (855)
Q Consensus 675 ~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~ 726 (855)
. .+.++.++|||||||++|+|+| |.+||............ +.. ....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~--~~~---~~~~ 263 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL--IKE---GYRM 263 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH--HHc---CCcC
Confidence 2 1234668999999999999998 99998654322211110 000 0011
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
..+...+..+.+|+.+||..+|.+||++ .+++..|+.+
T Consensus 264 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ell~~l~~~ 301 (302)
T cd05055 264 AQPEHAPAEIYDIMKTCWDADPLKRPTF-KQIVQLIGKQ 301 (302)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHHhh
Confidence 1222345789999999999999999999 8898888753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=303.21 Aligned_cols=210 Identities=27% Similarity=0.316 Sum_probs=169.8
Q ss_pred ceeeccCceEEEEEEE-----CCeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 534 LKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
+.||+|+||.||++.. .+..||+|++..... .....+.+|+.+|.+++||||+++++++. +..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999998865 357899999975432 23445778999999999999999999884 46889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~ 155 (318)
T cd05582 82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 155 (318)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce
Confidence 9999999843 3468999999999999999999999 799999999999999999999999998431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|+|+||+.||.............. .....|...+..+.+|
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~-------~~~~~p~~~~~~~~~l 228 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK-------AKLGMPQFLSPEAQSL 228 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc-------CCCCCCCCCCHHHHHH
Confidence 12457789999999999999999999976554332211100 1112344456789999
Q ss_pred HHHhhccCCCCCCChHH
Q 003033 740 AMRCCEMSRKSRPELGK 756 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~ 756 (855)
+.+||+.||.+||++.+
T Consensus 229 i~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 229 LRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHhhcCHhHcCCCCC
Confidence 99999999999999733
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-32 Score=299.63 Aligned_cols=213 Identities=21% Similarity=0.281 Sum_probs=172.4
Q ss_pred CccccceeeccCceEEEEEEECC--eEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~ 600 (855)
+|.....||+|+||.||+|...+ ..||||++..... .....+..|..++..+ +||+|+.+++++. +..+|||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47788999999999999998864 6899999976432 2234567788888887 5899999998874 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 99999999998843 2458899999999999999999999 799999999999999999999999998432
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|+||++||............. . ....+|...+.+
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~------~-~~~~~p~~~s~~ 227 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM------E-HNVAYPKSMSKE 227 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH------h-CCCCCCCcCCHH
Confidence 2346788999999999999999999997655432211111 0 112345556688
Q ss_pred HHHHHHHhhccCCCCCCCh
Q 003033 736 LANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~ 754 (855)
+.+|+.+||+.||.+|++.
T Consensus 228 ~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 228 AVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHHHcccCHHhcCCC
Confidence 9999999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-32 Score=298.79 Aligned_cols=206 Identities=24% Similarity=0.326 Sum_probs=166.6
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||+|+||.||+|... +..||||++.... ......+..|+.++..+ +||||+++++++. +..||||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5999999999999886 4689999997642 22345677899999876 7999999999984 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|..++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 82 DLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 99998853 2458899999999999999999999 799999999999999999999999998432
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
...++.++|||||||++|+|+||++||.............. ....+|...+.++.+|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~-------~~~~~p~~~~~~~~~ll~ 228 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH-------DDVLYPVWLSKEAVSILK 228 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc-------CCCCCCCCCCHHHHHHHH
Confidence 23467789999999999999999999976654332211100 011223334578999999
Q ss_pred HhhccCCCCCCC
Q 003033 742 RCCEMSRKSRPE 753 (855)
Q Consensus 742 ~Cl~~dP~~RPs 753 (855)
+||..||.+||+
T Consensus 229 ~~L~~dp~~R~~ 240 (321)
T cd05591 229 AFMTKNPNKRLG 240 (321)
T ss_pred HHhccCHHHcCC
Confidence 999999999994
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=289.27 Aligned_cols=223 Identities=24% Similarity=0.364 Sum_probs=177.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
.+.|+..++||.|+||.||+|... +..|++|.+..........|.+|+.+++.++||||+++++.+ ....++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356888999999999999999876 578999999765544466788999999999999999999987 4468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|..++... ...+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 91 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 91 CPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred CCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 9999998887432 3468999999999999999999998 799999999999999999999999997421
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++|||||||++|+|++|.+||.............. ...+ ....+...
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~-~~~~~~~~ 241 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SEPP-TLSQPSKW 241 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc---CCCc-cCCCCccc
Confidence 12245679999999999999999999976543332222111 1111 01112234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+.+|+.+||..+|.+||++ .+++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~-~~il 267 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSA-AQLL 267 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCH-HHHh
Confidence 4678999999999999999999 6664
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-32 Score=299.22 Aligned_cols=213 Identities=22% Similarity=0.271 Sum_probs=169.8
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||+|... +..||||+++... ......+..|+.++..+ +||||+++++++. +..+|||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999886 5789999997642 12345577788888765 8999999999884 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 999998853 2458899999999999999999999 899999999999999999999999998532
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|++||......... .... ......|...+.++.+|+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~li 227 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF-ESIR------VDTPHYPRWITKESKDIL 227 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-HHHH------hCCCCCCCCCCHHHHHHH
Confidence 234677899999999999999999999765543211 1100 011123334567899999
Q ss_pred HHhhccCCCCCCChHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl 759 (855)
.+||+.||.+||++.++++
T Consensus 228 ~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 228 EKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHccCCHHHcCCChHHHH
Confidence 9999999999999854543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-32 Score=302.89 Aligned_cols=206 Identities=22% Similarity=0.252 Sum_probs=166.5
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||++... +..||+|++..... .....+..|+.++..++||||+++++++. +..||||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 5999999999999875 57899999976422 22456788999999999999999999884 46889999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------ 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------ 675 (855)
|.+++.. ...+++..+..++.||+.||.|||+. ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 82 LFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccc
Confidence 9998843 34689999999999999999999962 489999999999999999999999998431
Q ss_pred -------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 676 -------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 676 -------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
...++.++|||||||++|+|+||+.||............ ......+|...+..+.+|+.+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i-------~~~~~~~p~~~~~~~~~li~~ 229 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI-------LMEEIRFPRTLSPEAKSLLSG 229 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH-------hcCCCCCCCCCCHHHHHHHHH
Confidence 234678899999999999999999999655432211111 001112344456789999999
Q ss_pred hhccCCCCCC
Q 003033 743 CCEMSRKSRP 752 (855)
Q Consensus 743 Cl~~dP~~RP 752 (855)
||+.||.+|+
T Consensus 230 ~L~~dP~~R~ 239 (325)
T cd05594 230 LLKKDPKQRL 239 (325)
T ss_pred HhhcCHHHhC
Confidence 9999999997
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=283.57 Aligned_cols=220 Identities=24% Similarity=0.388 Sum_probs=177.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|...+.||+|+||.||+|... +..|++|.+..... .....+.+|+.++++++||||+++++++. +..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999875 58899999875432 23567889999999999999999999984 458899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
+++++|.+++... ....+++..+..++.+++.||.|||. .+|+||||||+||+++.++.+||+|||+.
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999998643 23568999999999999999999998 79999999999999999999999999732
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
....++.++|||||||++|+|+||+.||............ ...... ..+...+..+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~ 230 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI--IRGVFP----PVSQMYSQQLA 230 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HcCCCC----CCccccCHHHH
Confidence 1234577899999999999999999999766533221111 111111 12224457899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+++.+||+.+|.+||++ .+++
T Consensus 231 ~~i~~~l~~~p~~Rp~~-~~ll 251 (256)
T cd08529 231 QLIDQCLTKDYRQRPDT-FQLL 251 (256)
T ss_pred HHHHHHccCCcccCcCH-HHHh
Confidence 99999999999999999 5554
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=290.65 Aligned_cols=221 Identities=25% Similarity=0.389 Sum_probs=178.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
.+|...+.||.|+||.||+|... +..||+|.+..........+.+|+.+++.++||||+++++.| ....++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 47888899999999999999864 578999999876555567789999999999999999999987 34689999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.. ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 100 ~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred CCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 99999999842 357899999999999999999999 799999999999999999999999998421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|++|++||.............. ....+ ...+...+..+.+
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~~ 248 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT--NGTPE--LQNPEKLSAIFRD 248 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc--CCCCC--CCCccccCHHHHH
Confidence 12356789999999999999999999976543322211110 00011 1123344567899
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
|+.+||..+|.+||++ .+++.
T Consensus 249 li~~~l~~~p~~Rpt~-~eil~ 269 (296)
T cd06654 249 FLNRCLDMDVEKRGSA-KELLQ 269 (296)
T ss_pred HHHHHCcCCcccCcCH-HHHhh
Confidence 9999999999999999 66643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=284.99 Aligned_cols=227 Identities=26% Similarity=0.380 Sum_probs=179.4
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
++.+++++.....||+|+||.||+|.+. +..||+|.+..........+.+|+.++++++||||++++++|. +..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4556777877889999999999999876 4679999987665555667999999999999999999999984 46889
Q ss_pred EEEecCCCCHHHHhcccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeeccccc
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPL--SWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLA 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~ 675 (855)
||||+++++|.+++.... .++ ++..+..++.||+.||.|||+ ++|+||||||+||+++. ++.+||+|||...
T Consensus 83 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 999999999999986432 234 788889999999999999998 79999999999999976 6799999997421
Q ss_pred -------------------------c--CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 -------------------------S--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 -------------------------~--~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
. ..++.++|||||||++|+|++|++||.............. .......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~ 233 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG----MFKIHPEI 233 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh----hhccCCCC
Confidence 1 1256789999999999999999999964332211111100 01112234
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
|......+.+|+.+||+.+|.+||++ .+++
T Consensus 234 ~~~~~~~~~~li~~~l~~~p~~Rpt~-~~ll 263 (268)
T cd06624 234 PESLSAEAKNFILRCFEPDPDKRASA-HDLL 263 (268)
T ss_pred CcccCHHHHHHHHHHcCCCchhCCCH-HHHH
Confidence 44556789999999999999999999 6654
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=293.95 Aligned_cols=225 Identities=23% Similarity=0.353 Sum_probs=172.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|...++||+|+||.||+|... +..||||.++..... ....+.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999875 577999998755332 2346789999999999999999999983 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++ +|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 974 888887432 3457889999999999999999999 899999999999999999999999997431
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc-----ccccc------
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK-----LKNLL------ 721 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~-----~~~~~------ 721 (855)
...++.++|||||||++|+|+||++||............ +. +..+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 123577899999999999999999999754432111100 00 00000
Q ss_pred --C-CCC-----CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 722 --D-PLA-----GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 722 --d-~~~-----~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+ +.. .......+..+.+|+.+||..||.+||++ .+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-~e~l 284 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISA-EEAM 284 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCH-HHHh
Confidence 0 000 00011234678899999999999999998 6654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=313.74 Aligned_cols=230 Identities=20% Similarity=0.278 Sum_probs=182.6
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC--
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-- 594 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-- 594 (855)
.++.....+|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|..++|+||+++++.+..
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 344556689999999999999999999874 688999999765332 23568899999999999999998876521
Q ss_pred --------ceEEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc
Q 003033 595 --------VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 595 --------~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
..++||||+++|+|.++|... ....++++.....|+.|++.||.|||+ ++|+||||||+|||++.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCC
Confidence 257999999999999998542 233568999999999999999999999 79999999999999999999
Q ss_pred EEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc
Q 003033 666 SKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 718 (855)
Q Consensus 666 ~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~ 718 (855)
+||+|||+.. ...++.++|||||||++|||++|++||............ ..
T Consensus 182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~--~~ 259 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT--LA 259 (496)
T ss_pred EEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--hc
Confidence 9999998531 234678899999999999999999999765432221111 11
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...+ ..|...+..+.+|+.+||..||.+||++ .+++.
T Consensus 260 ~~~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~-~ell~ 296 (496)
T PTZ00283 260 GRYD----PLPPSISPEMQEIVTALLSSDPKRRPSS-SKLLN 296 (496)
T ss_pred CCCC----CCCCCCCHHHHHHHHHHcccChhhCcCH-HHHHh
Confidence 1111 2334456789999999999999999999 56653
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=311.95 Aligned_cols=224 Identities=23% Similarity=0.370 Sum_probs=170.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--------C--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E-- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~-- 594 (855)
..+|...+.||+|+||.||+|... +..||||.+... .....+|+.+|+.++|||||++++++. .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999875 578999988543 234568999999999999999988751 1
Q ss_pred ceEEEEEecCCCCHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeecc
Q 003033 595 VWTLVYEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFE 672 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg 672 (855)
.+++||||+++ +|.+++.. ......+++.....++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 25689999974 67766632 2234568999999999999999999999 8999999999999998664 79999998
Q ss_pred ccc-------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-----------
Q 003033 673 FLA-------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK----------- 716 (855)
Q Consensus 673 ~~~-------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~----------- 716 (855)
+.. ...++.++|||||||+||||+||.+||............-.
T Consensus 217 la~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 217 SAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK 296 (440)
T ss_pred cchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 431 12478889999999999999999999976544322211100
Q ss_pred -----ccccc-C-----CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 -----LKNLL-D-----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 -----~~~~~-d-----~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+. + .+...+|...+.++.+|+.+||..||.+||++ .+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta-~e~l 349 (440)
T PTZ00036 297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNP-IEAL 349 (440)
T ss_pred HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 00000 0 00111233345789999999999999999999 5554
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=276.31 Aligned_cols=235 Identities=24% Similarity=0.297 Sum_probs=188.9
Q ss_pred hhcccCCccccceeeccCceEEEEEEE--CCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee-------c
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-------P 593 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~-------~ 593 (855)
+....++|.+.+.||+|||+-||.+.. .+..+|+|++......+.+..++|++..++++||||+++++++ .
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 345567899999999999999998763 4578999999887777788899999999999999999999886 1
Q ss_pred CceEEEEEecCCCCHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDN-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
...||++.|...|+|.+.+..... ...+++.+.+.|+.+|++||.+||...| ++.||||||+|||+.+.+.++|.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEecc
Confidence 247899999999999998865433 3368999999999999999999999664 79999999999999999999999997
Q ss_pred cc-------------------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc
Q 003033 673 FL-------------------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 715 (855)
Q Consensus 673 ~~-------------------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~ 715 (855)
-+ ....++.++|||||||+||.|+.|..||.. .+..|
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~------~~~~G 248 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER------IYQQG 248 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH------HhhcC
Confidence 21 123467899999999999999999999942 22222
Q ss_pred -ccccccCCCCCCCCh--hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 716 -KLKNLLDPLAGDWPF--VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 716 -~~~~~~d~~~~~~p~--~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+.-.+....-.||. ..++.+.+|+..|++.||.+||+. .+++..++.+
T Consensus 249 gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i-~~ll~~~d~L 300 (302)
T KOG2345|consen 249 GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTI-PELLSKLDDL 300 (302)
T ss_pred CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCH-HHHHHHHHhh
Confidence 221111111122332 257889999999999999999999 7787777654
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-32 Score=307.23 Aligned_cols=220 Identities=25% Similarity=0.399 Sum_probs=185.1
Q ss_pred CccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC-ceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~LV~E 601 (855)
.....++||+|.||.|++|.|.. ..||||.++..... ....|++|+.+|.+|+|||+|+|||+.-+ ...+|||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~E 190 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFE 190 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhh
Confidence 34456789999999999999973 46999999987654 56789999999999999999999999864 5679999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
+++.|+|.+.|.. .....|.......++.|||.|+.||.+ +++|||||-..||||.....+||+|||+.
T Consensus 191 LaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999976 455678889999999999999999999 89999999999999999999999999742
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
....++.++|||+|||+||||+| |..||-+....+...... +.....-|..+
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD------~~erLpRPk~c 340 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID------AGERLPRPKYC 340 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc------ccccCCCCCCC
Confidence 34567889999999999999999 678987776654332221 11223456778
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
++.+.+++..||..+|.+||++ ..|.
T Consensus 341 sedIY~imk~cWah~paDRptF-sair 366 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTF-SAIR 366 (1039)
T ss_pred hHHHHHHHHHhccCCccccccH-HHHH
Confidence 8999999999999999999999 4553
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=288.99 Aligned_cols=223 Identities=27% Similarity=0.389 Sum_probs=178.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
.++|++.+.||.|+||.||+|... +..||+|.+..........|.+|+.++++++||||+++++.+. ...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888999999999999999875 5789999997654444567899999999999999999999884 467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ..++++.....++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||...
T Consensus 84 ~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 84 CDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred cCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 9999999998532 2468999999999999999999999 799999999999999999999999997321
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++|||||||++|+|++|++||............... ..+ ....|...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~-~~~~~~~~ 234 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS---EPP-TLDQPSKW 234 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC---CCC-CcCCcccC
Confidence 123456899999999999999999999765443322221110 001 01112234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+.+++.+||..+|.+||++ .+++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~-~~il 260 (280)
T cd06611 235 SSSFNDFLKSCLVKDPDDRPTA-AELL 260 (280)
T ss_pred CHHHHHHHHHHhccChhhCcCH-HHHh
Confidence 5678999999999999999999 5553
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=286.53 Aligned_cols=224 Identities=25% Similarity=0.367 Sum_probs=178.7
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--C-----ChhhHHHHHHHHHhcCCCcceeEecee---c
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--Q-----GPSEFQQEIDILSKIRHPNLVTLVGAC---P 593 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~---~ 593 (855)
-.++|-.+.+||+|||+.||++.+- .+.||||+-..+.. . ..+...+|..|.+.|.||.||++|++| .
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3457888899999999999999754 57899998654321 1 123467899999999999999999998 4
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC---CCCcEEEee
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSD 670 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~~KL~D 670 (855)
+.+|-|+|||+|.+|.-+|.. ...++......|+.||+.||.||...+| +|||-||||.||||- ..|.+||+|
T Consensus 541 dsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNEikp-PIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNEIKP-PIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhccCC-CeeeeccCCccEEEecCcccceeEeee
Confidence 679999999999999999953 3468899999999999999999999775 899999999999994 458899999
Q ss_pred cccc------------------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003033 671 FEFL------------------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 714 (855)
Q Consensus 671 Fg~~------------------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~ 714 (855)
||+. ....++.|+||||.|||+|+++.|+.||+.....+..+..
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe 696 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE 696 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence 9721 1234678999999999999999999999877666655555
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..+........+.-| ..+.+...++.+||++.-.+|.+.
T Consensus 697 NTIlkAtEVqFP~KP-vVsseAkaFIRRCLaYRKeDR~DV 735 (775)
T KOG1151|consen 697 NTILKATEVQFPPKP-VVSSEAKAFIRRCLAYRKEDRIDV 735 (775)
T ss_pred hchhcceeccCCCCC-ccCHHHHHHHHHHHHhhhhhhhhH
Confidence 443332222222222 345678999999999999999887
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=280.99 Aligned_cols=220 Identities=31% Similarity=0.518 Sum_probs=178.5
Q ss_pred ceeeccCceEEEEEEEC-----CeEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||+|... +..||+|.+....... ...+.+|+.++..++||||+++++++. ...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 36999999999999876 6689999998764433 568899999999999999999999884 467899999999
Q ss_pred CCHHHHhcccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 606 GSLEDRLSCKDN------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 606 GsL~~~L~~~~~------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|+|.+++..... ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999964321 3679999999999999999999999 899999999999999999999999997431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++|||||||++|+|++ |.+||............. .......|..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~ 231 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR------KGYRLPKPEY 231 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH------cCCCCCCCcc
Confidence 1245678999999999999999 699997654332211111 1111223444
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
.+..+.+++.+||..+|.+||++ .+++..|+
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~-~~l~~~l~ 262 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTF-SELVERLE 262 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCH-HHHHHhhC
Confidence 56789999999999999999999 78877663
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=282.17 Aligned_cols=227 Identities=30% Similarity=0.500 Sum_probs=183.4
Q ss_pred ccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
..++|.+.+.||.|+||.||+|...+ ..||||.+.... .....+.+|+.++++++||||+++++++. ...++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 34678889999999999999998764 679999987543 34578999999999999999999999884 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++++|.+++... ....+++..+..++.+++.||.|||. ++|+|+||||+||+++.++.+||+|||+..
T Consensus 83 ~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 9999999999543 23468999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
+..++.++|||||||++|+|+| |++||............. .......|...+..
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 232 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE------RGYRMPRPPNCPEE 232 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH------cCCCCCCCCCCCHH
Confidence 1345778999999999999999 999996543322111110 00111122334578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.+++.+||..+|.+||++ +++...|+.
T Consensus 233 ~~~~i~~~l~~~p~~Rp~~-~~l~~~l~~ 260 (261)
T cd05034 233 LYDLMLQCWDKDPEERPTF-EYLQSFLED 260 (261)
T ss_pred HHHHHHHHcccCcccCCCH-HHHHHHHhc
Confidence 9999999999999999999 888888764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-32 Score=291.87 Aligned_cols=216 Identities=27% Similarity=0.341 Sum_probs=177.0
Q ss_pred CCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
+.|+.+++||.|.-|+||++.+++ ..+|+|++.+..... ..+.+.|.+||+.++||.|++||..|. +..||||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 357778899999999999999986 679999998765443 345677999999999999999999994 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc--------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE-------- 672 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg-------- 672 (855)
|||+||+|..+++ +.....++...+..++.+|+.||+|||- .|||+|||||+||||.++|++-|+||.
T Consensus 157 eyCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999998875 4456789999999999999999999999 899999999999999999999999992
Q ss_pred -------------------------------------------------------------------------ccccCCC
Q 003033 673 -------------------------------------------------------------------------FLASGEL 679 (855)
Q Consensus 673 -------------------------------------------------------------------------~~~~~~~ 679 (855)
++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 1122233
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC-C-CCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 680 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-P-LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 680 t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d-~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+.++|+|+|||+||||+.|..||.+.+.-....+ ++- + ..+..| ..+..+.+||.+.|..||.+|--.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N------Iv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN------IVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH------HhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhcc
Confidence 5578999999999999999999987665433222 221 1 112222 456789999999999999999874
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=289.52 Aligned_cols=232 Identities=26% Similarity=0.438 Sum_probs=177.4
Q ss_pred CCccccceeeccCceEEEEEEEC------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceecC----ce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE----VW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~ 596 (855)
..|...+.||+|+||.||.+.+. +..||+|.++.... .....|.+|+.++++++||||++++++|.+ ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 35788889999999999998753 46799999875532 234578999999999999999999998843 47
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++|+|.+++... ...++|..+..++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccc
Confidence 8999999999999998532 2358999999999999999999999 899999999999999999999999997431
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH-HHhh--cc------ccc
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-ALDT--GK------LKN 719 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~-~~~~--~~------~~~ 719 (855)
...++.++|||||||++|+|+|++.|+........ .... +. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 13456789999999999999998776532111000 0000 00 000
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+........+...+..+.+|+.+||+.+|.+||++ ++++..|+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~il~~l~~~ 283 (284)
T cd05079 239 LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTF-QNLIEGFEAI 283 (284)
T ss_pred HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCH-HHHHHHHHhh
Confidence 00001111123356789999999999999999999 8898888754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=286.85 Aligned_cols=234 Identities=25% Similarity=0.375 Sum_probs=184.2
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec-
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP- 593 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~- 593 (855)
+.++.+....++|+....||+|+||.||++... +..+|+|++.... .....+.+|+.++..+ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 445677788899999999999999999999875 5789999986532 2245688999999999 6999999999872
Q ss_pred ------CceEEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 594 ------EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 594 ------~~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
+..++||||+++|+|.+++... .....+++..+..++.+++.||.|||+ ++|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCE
Confidence 2478999999999999987532 233468899999999999999999999 799999999999999999999
Q ss_pred EEeeccccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc
Q 003033 667 KLSDFEFLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 716 (855)
Q Consensus 667 KL~DFg~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~ 716 (855)
||+|||+.. ...++.++|||||||++|+|++|++||..............
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 243 (286)
T cd06638 164 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR 243 (286)
T ss_pred EEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc
Confidence 999997431 12256789999999999999999999976554333222111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
. ..+ ....|...+..+.+|+.+||+.||.+||++ .++++
T Consensus 244 ~---~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~ell~ 282 (286)
T cd06638 244 N---PPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTV-SDLLQ 282 (286)
T ss_pred c---CCC-cccCCCCcCHHHHHHHHHHccCCcccCCCH-HHHhh
Confidence 1 000 111122334679999999999999999999 66654
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-31 Score=294.52 Aligned_cols=224 Identities=24% Similarity=0.268 Sum_probs=170.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||++... +..||||++.... ......|.+|+.++..++||||+.++++|. +..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36888999999999999999876 5789999997532 123456889999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 999999999998532 3458899999999999999999999 899999999999999999999999998421
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.+.++.++|||||||++|+|++|+.||.................... ....+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~- 233 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ-FPPDV- 233 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc-CCCcc-
Confidence 12346689999999999999999999976543322111110001011 11111
Q ss_pred hhhHHHHHHHHHHhhccCCC--CCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRK--SRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~--~RPs~~~evl 759 (855)
...+..+.+|+.+|+..+++ .||++ ++++
T Consensus 234 ~~~~~~~~~li~~ll~~~~~r~~r~~~-~~~l 264 (331)
T cd05597 234 TDVSEEAKDLIRRLICSPETRLGRNGL-QDFK 264 (331)
T ss_pred CCCCHHHHHHHHHHccCcccccCCCCH-HHHh
Confidence 12456788899888765333 36777 5553
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=286.80 Aligned_cols=225 Identities=24% Similarity=0.411 Sum_probs=179.2
Q ss_pred CccccceeeccCceEEEEEEECC-----eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
+|...+.||+|+||.||+|.+.. ..||||.+.... ......|..|+.+++.++||||+++++++. +..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999998752 369999987542 223457999999999999999999999984 3578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ...+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+..
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 999999999998543 3468999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|||++ |.+||............... .....+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~ 233 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD------YRLPPP 233 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC------CcCCCc
Confidence 1334678999999999999886 99999654432211111100 111123
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+..+.+++.+||..+|.+||++ .+|+..|+.+
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~~ 268 (269)
T cd05065 234 MDCPTALHQLMLDCWQKDRNARPKF-GQIVSTLDKM 268 (269)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence 3445678999999999999999999 7888888753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-33 Score=300.70 Aligned_cols=219 Identities=26% Similarity=0.356 Sum_probs=178.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
..|....+||+|.||.||+|.+. ++.||||++...... ....+++|+.+|.+++++||.++||.+ ...++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 34666788999999999999886 477999999876443 357899999999999999999999987 4567899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc---------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF--------- 673 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~--------- 673 (855)
|.||++.++|. ....+.+..+.-|+.+++.||.|||. ++.+|||||++|||+..+|.+||+|||+
T Consensus 93 ~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 93 CGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred hcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 99999999994 33445777888899999999999999 8899999999999999999999999973
Q ss_pred ----------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 674 ----------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 674 ----------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
+....|+.|+|||||||+.+||++|.||+...+.+... ..+.....+......+..+.
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------flIpk~~PP~L~~~~S~~~k 240 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------FLIPKSAPPRLDGDFSPPFK 240 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------EeccCCCCCccccccCHHHH
Confidence 34457899999999999999999999999755543211 11111122222334567899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+++..||..||+.||++ .+++
T Consensus 241 EFV~~CL~k~P~~RpsA-~~LL 261 (467)
T KOG0201|consen 241 EFVEACLDKNPEFRPSA-KELL 261 (467)
T ss_pred HHHHHHhhcCcccCcCH-HHHh
Confidence 99999999999999998 5554
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=301.04 Aligned_cols=215 Identities=25% Similarity=0.318 Sum_probs=169.3
Q ss_pred CccccceeeccCceEEEEEEE-----CCeEEEEEEecCCC----CCChhhHHHHHHHHHhcC-CCcceeEeceec--Cce
Q 003033 529 NFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVW 596 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~ 596 (855)
+|+..+.||+|+||.||++.. .+..||+|++.... ......+..|+.+|..++ ||||+.+++++. +..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999875 35789999987532 122456788999999994 999999998884 457
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 899999999999999853 2458899999999999999999999 799999999999999999999999998432
Q ss_pred -------------------------c-CCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCC
Q 003033 676 -------------------------S-GELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 -------------------------~-~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~ 727 (855)
. ..++.++|||||||++|+|+||++||...... ...+... +. .....
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~-~~----~~~~~ 229 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR-IL----KCDPP 229 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH-Hh----cCCCC
Confidence 0 12567899999999999999999999643211 1111110 00 11122
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+|...+..+.+|+.+||..||.+||+.
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~R~~~ 256 (332)
T cd05614 230 FPSFIGPEAQDLLHKLLRKDPKKRLGA 256 (332)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCC
Confidence 344456789999999999999999954
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-31 Score=282.68 Aligned_cols=218 Identities=24% Similarity=0.428 Sum_probs=175.4
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCCh---------hhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP---------SEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~---------~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
|.....||.|+||.||+|... +..||+|.+........ ..+.+|+.++++++||||+++++++. +..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566778999999999999874 57899999876533221 45789999999999999999999884 467
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++++|.+++.. ...+++..+..++.+++.||.|||+ ++++||||+|+|||++.++.+||+|||+..
T Consensus 82 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 899999999999999943 3468899999999999999999998 799999999999999999999999997421
Q ss_pred ------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 676 ------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 676 ------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
...++.++|||||||++|+|++|+.||.............. ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~ 229 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------NAS 229 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc------cCC
Confidence 12345679999999999999999999976554433222211 111
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...|...+..+.+++.+||+.||.+||++ .++++
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~il~ 263 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTA-AELLK 263 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCH-HHHhh
Confidence 22333455789999999999999999999 66643
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=300.82 Aligned_cols=222 Identities=24% Similarity=0.278 Sum_probs=175.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|.....||+|+||.||++... +..||||+++.... .....+..|+.++..++||||+++++++. +..+|||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999875 57899999986432 23456889999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999999998533 2468999999999999999999999 899999999999999999999999998431
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++|+.||............-.....+. ...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---~~~ 232 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK---FPE 232 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC---CCC
Confidence 12356789999999999999999999975544332211111111111 011
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+..+.+|+.+|+. +|.+||++ ++++
T Consensus 233 ~~~~~~~~~~li~~ll~-~p~~R~t~-~~l~ 261 (330)
T cd05601 233 DPKVSSDFLDLIQSLLC-GQKERLGY-EGLC 261 (330)
T ss_pred CCCCCHHHHHHHHHHcc-ChhhCCCH-HHHh
Confidence 11345778999999998 99999999 5553
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=282.84 Aligned_cols=213 Identities=30% Similarity=0.470 Sum_probs=168.5
Q ss_pred eeeccCceEEEEEEECCe------------EEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEE
Q 003033 535 KIGEGGYGSIYKGLLRHM------------QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE 601 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~~------------~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~E 601 (855)
.||+|+||.||+|.+... .|++|.+...... ...|.+|+.+|+.++||||++++|+|. +..++|||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 689999999999988643 3888887655432 678999999999999999999999874 45789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-------cEEEeecccc
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-------VSKLSDFEFL 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-------~~KL~DFg~~ 674 (855)
|+++|+|.+++.... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||+.
T Consensus 81 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 81 YVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred cCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 999999999985432 268999999999999999999998 8999999999999999887 8999999743
Q ss_pred cc---------------------C--CCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 003033 675 AS---------------------G--ELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 675 ~~---------------------~--~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
.. . .++.++|||||||++|+|++ |.+||............. .. ..++.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~------~~--~~~~~ 227 (259)
T cd05037 156 ITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ------DQ--HRLPM 227 (259)
T ss_pred cccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh------cC--CCCCC
Confidence 21 2 46778999999999999999 577775443211111000 00 11122
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
.....+.+++.+||..+|.+||++ .++++.|
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~-~~il~~l 258 (259)
T cd05037 228 PDCAELANLINQCWTYDPTKRPSF-RAILRDL 258 (259)
T ss_pred CCchHHHHHHHHHhccChhhCCCH-HHHHHhc
Confidence 223789999999999999999999 7787765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=301.79 Aligned_cols=223 Identities=23% Similarity=0.312 Sum_probs=171.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceecC-------ceE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT 597 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------~~~ 597 (855)
+|+..++||+|+||.||++... ++.||||.+..... .....+.+|+.+|..++||||+++++++.. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999864 68899999865321 234578899999999999999999998832 578
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 67888774 23468999999999999999999999 799999999999999999999999998432
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-------------
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------- 717 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~------------- 717 (855)
...++.++|||||||++|||++|++||...+...........
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 123577899999999999999999999765433211100000
Q ss_pred ---c-ccc-CCCC-------CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 ---K-NLL-DPLA-------GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ---~-~~~-d~~~-------~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. .+. .+.. .......+..+.+|+.+||+.||.+||++ .+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-~e~l 286 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISA-ADAL 286 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCH-HHHh
Confidence 0 000 0000 01112235678999999999999999999 6664
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-32 Score=298.23 Aligned_cols=207 Identities=24% Similarity=0.292 Sum_probs=167.4
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||+|+||.||+|... ++.||||++.... ......+..|+.++..+ +||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 6999999999999876 5789999997542 22345677899999877 6999999999884 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 82 DLMFHIQK---SRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred hHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 99998853 2458899999999999999999999 899999999999999999999999998532
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
...++.++|||||||++|+|++|++||............ .. ....+|...+..+.+|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i--~~-----~~~~~~~~~~~~~~~li~ 228 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI--LN-----DEVVYPTWLSQDAVDILK 228 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH--hc-----CCCCCCCCCCHHHHHHHH
Confidence 233567899999999999999999999765543221111 00 011223345578999999
Q ss_pred HhhccCCCCCCCh
Q 003033 742 RCCEMSRKSRPEL 754 (855)
Q Consensus 742 ~Cl~~dP~~RPs~ 754 (855)
+||+.||.+||+.
T Consensus 229 ~~L~~dP~~R~~~ 241 (320)
T cd05590 229 AFMTKNPTMRLGS 241 (320)
T ss_pred HHcccCHHHCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=293.33 Aligned_cols=228 Identities=25% Similarity=0.428 Sum_probs=182.2
Q ss_pred CCccccceeeccCceEEEEEEEC---------CeEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--C
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~ 594 (855)
.+|...++||+|+||.||++... ...||+|.++.... .....+.+|+.++.++ +||||++++++|. .
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46788899999999999999752 24699999875432 2245688999999999 6999999999984 3
Q ss_pred ceEEEEEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
..++||||+++|+|.+++.... ....++|.....++.||+.||.|||+ ++|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence 5789999999999999985422 12458999999999999999999998 8999999999999999
Q ss_pred CCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HH
Q 003033 662 ANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YA 711 (855)
Q Consensus 662 ~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~ 711 (855)
.++.+||+|||+.. .+.++.++|||||||++|+|++ |..||....... ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~ 248 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999998532 1335678999999999999999 889986544321 11
Q ss_pred HhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 712 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 712 ~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+..+ .....|...+..+.+|+.+||..+|.+||++ .+++..|..+..
T Consensus 249 ~~~~--------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~~ll~~l~~~~~ 295 (314)
T cd05099 249 LREG--------HRMDKPSNCTHELYMLMRECWHAVPTQRPTF-KQLVEALDKVLA 295 (314)
T ss_pred HHcC--------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHHH
Confidence 1111 1112233445789999999999999999999 899999998754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=301.39 Aligned_cols=209 Identities=22% Similarity=0.299 Sum_probs=166.1
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||++... +..||+|++..... .....+..|+.++.++ +||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999876 47899999986432 2234577899998877 7999999999883 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|..++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 999988843 2468999999999999999999999 799999999999999999999999998432
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHhhcccccccCCCCCCCChhh
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE--------VQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~--------~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
+..++.++|||||||++|+|+||++||..... ...... .+.......|...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~------~i~~~~~~~p~~~ 228 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ------VILEKQIRIPRSL 228 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH------HHhcCCCCCCCCC
Confidence 23457789999999999999999999952110 000100 0011112344455
Q ss_pred HHHHHHHHHHhhccCCCCCCCh
Q 003033 733 AEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+..+.+|+.+||..||.+||+.
T Consensus 229 ~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 229 SVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CHHHHHHHHHHhcCCHHHcCCC
Confidence 6789999999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.5e-32 Score=303.35 Aligned_cols=221 Identities=23% Similarity=0.275 Sum_probs=175.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
..++|...++||+|+||.||++... +..||||++.... ......+.+|+.+|+.++||||+++++++. +..+|
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3457888999999999999999876 5789999997532 123345788999999999999999999884 45789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc--
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS-- 676 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~-- 676 (855)
||||+++|+|.+++.. ..++......++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 9999999999999843 247788888999999999999999 7999999999999999999999999985310
Q ss_pred ----------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 677 ----------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 677 ----------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
..++.++|||||||++|||++|++||............... .. ...+
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~---~~--~~~~ 268 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH---KN--SLTF 268 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC---CC--cCCC
Confidence 12567899999999999999999999766543222111000 00 1112
Q ss_pred Ch--hhHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 003033 729 PF--VQAEQLANLAMRCCEMSRKS--RPELGKDVW 759 (855)
Q Consensus 729 p~--~~~~~l~~L~~~Cl~~dP~~--RPs~~~evl 759 (855)
|. ..+..+.+|+.+||..+|.+ ||++ ++++
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~p~r~~R~s~-~ell 302 (370)
T cd05596 269 PDDIEISKQAKDLICAFLTDREVRLGRNGV-DEIK 302 (370)
T ss_pred CCcCCCCHHHHHHHHHHccChhhccCCCCH-HHHh
Confidence 22 34678999999999999987 9998 6653
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-31 Score=281.01 Aligned_cols=221 Identities=25% Similarity=0.385 Sum_probs=177.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
++|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.++++++||||+++++++. +..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 47888999999999999999764 588999998754321 2346888999999999999999999984 46889
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++++|.+++.. ...+++.....++.+++.||.|||. .+|+||||+|+|||++.++.+||+|||...
T Consensus 82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 9999999999998853 2458889999999999999999999 799999999999999999999999998531
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
+..++.++|||||||++|+|++|++||.............. .......|.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~ 230 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-----QPTNPQLPS 230 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-----cCCCCCCCc
Confidence 12245789999999999999999999965433322221111 111223444
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+..+.+++.+||..+|.+||++ .+++.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rpt~-~~ll~ 259 (263)
T cd06625 231 HVSPDARNFLRRTFVENAKKRPSA-EELLR 259 (263)
T ss_pred cCCHHHHHHHHHHhhcCcccCCCH-HHHhh
Confidence 556789999999999999999999 66653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-32 Score=296.62 Aligned_cols=208 Identities=22% Similarity=0.272 Sum_probs=169.0
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEecee--cCceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||+|... +..||||+++... ......+.+|+.++..+ +||||+++++++ .+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999886 4689999997542 22345677899999888 699999999988 3468999999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 999998853 2468999999999999999999999 899999999999999999999999998431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
+..++.++|||||||++|+|+||+.||.............. ....+|...+..+.+|+
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~-------~~~~~~~~~~~~~~~li 227 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE-------DEVRYPRWLSKEAKSIL 227 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-------CCCCCCCcCCHHHHHHH
Confidence 23467789999999999999999999976554322111100 01123344567899999
Q ss_pred HHhhccCCCCCCCh
Q 003033 741 MRCCEMSRKSRPEL 754 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~ 754 (855)
.+||..||.+||++
T Consensus 228 ~~~l~~dP~~R~s~ 241 (318)
T cd05570 228 KSFLTKNPEKRLGC 241 (318)
T ss_pred HHHccCCHHHcCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-32 Score=301.66 Aligned_cols=224 Identities=26% Similarity=0.461 Sum_probs=186.4
Q ss_pred ccccceeeccCceEEEEEEECC------eEEEEEEecCC-CCCChhhHHHHHHHHHhcCCCcceeEeceecC-ceEEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYE 601 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~-~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~LV~E 601 (855)
....++||.|.||.||+|.+.. ..||||..+.+ ...+.+.|++|.-+|++++|||||+|+|+|.+ ..+||||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmE 470 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVME 470 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEe
Confidence 3446789999999999998753 35999999875 34457889999999999999999999999965 5789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
.++-|.|..+|..+ ...|+......++.||+.||.|||+ ..+|||||...|||+.....+||+|||+.
T Consensus 471 L~~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 471 LAPLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred cccchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 99999999999644 3468888999999999999999999 78999999999999999999999999842
Q ss_pred -------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 675 -------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 675 -------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
....+|.++|||-|||.+||++. |..||.+...- ..+..+-...+.+.|..++.
T Consensus 546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs------DVI~~iEnGeRlP~P~nCPp 619 (974)
T KOG4257|consen 546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS------DVIGHIENGERLPCPPNCPP 619 (974)
T ss_pred hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc------ceEEEecCCCCCCCCCCCCh
Confidence 22457889999999999999976 89999643321 11222222345567788889
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.|..|+.+||+++|.+||.+ .++...|..+
T Consensus 620 ~LYslmskcWayeP~kRPrf-tei~~~lsdv 649 (974)
T KOG4257|consen 620 ALYSLMSKCWAYEPSKRPRF-TEIKAILSDV 649 (974)
T ss_pred HHHHHHHHHhccCcccCCcH-HHHHHHHHHH
Confidence 99999999999999999999 7887777765
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=286.37 Aligned_cols=212 Identities=23% Similarity=0.301 Sum_probs=165.8
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||+|+||.||++... +..||+|.+...... ....+..|+++|.+++||||+++++++. ...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999875 688999998753221 2334667999999999999999999884 468899999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
.+++... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCC
Confidence 9887533 23458999999999999999999999 899999999999999999999999997421
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
...++.++|||||||++|+|++|++||...... ...+....+...+... ....+.++.+|+.+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~ 232 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE----HQNFTEESKDICRL 232 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc----cccCCHHHHHHHHH
Confidence 234677899999999999999999999643221 1111111111111100 11345679999999
Q ss_pred hhccCCCCCCChH
Q 003033 743 CCEMSRKSRPELG 755 (855)
Q Consensus 743 Cl~~dP~~RPs~~ 755 (855)
||+.||.+||++.
T Consensus 233 ~L~~~P~~R~~~~ 245 (277)
T cd05607 233 FLAKKPEDRLGSR 245 (277)
T ss_pred HhccCHhhCCCCc
Confidence 9999999999994
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-32 Score=288.36 Aligned_cols=215 Identities=26% Similarity=0.401 Sum_probs=168.8
Q ss_pred eeeccCceEEEEEEECC---------eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.||.|+||.||+|.... ..||+|.+..........|..|+.+++.++||||+++++++. +..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 58999999999997642 348889886554444567889999999999999999999983 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc--------EEEeeccccc
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--------SKLSDFEFLA 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--------~KL~DFg~~~ 675 (855)
++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++. +|++|||+..
T Consensus 82 ~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 82 KFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999998533 2368999999999999999999999 79999999999999987664 6999997421
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++|||||||++|+|++| .+||.............. ....|...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 228 (258)
T cd05078 157 TVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED--------RHQLPAPK 228 (258)
T ss_pred ccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc--------cccCCCCC
Confidence 12367789999999999999998 467654433221111100 11223333
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
..++.+|+.+||+.||.+||++ +++++.|+
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~-~~il~~l~ 258 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSF-RAIIRDLN 258 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCH-HHHHHhcC
Confidence 4679999999999999999999 77877663
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=285.40 Aligned_cols=223 Identities=26% Similarity=0.344 Sum_probs=175.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
++|...+.||+|+||.||+|... +..||+|.++.........+.+|+.++..++||||+++++++ .+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46888889999999999999875 578999999766544456688999999999999999999987 45688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.. ...+++.....++.|++.||.|||. ++|+|+||||+|||++.++.+||+|||+..
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06645 89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK 162 (267)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence 99999998843 3468999999999999999999999 799999999999999999999999997421
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+.++.++|||||||++|+|++|.+||.............. .....+. .......+..
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 240 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK-SNFQPPK-LKDKMKWSNS 240 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc-cCCCCCc-ccccCCCCHH
Confidence 22356789999999999999999999854332221111100 0111110 0001123457
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+++.+||..+|.+||++ ++++
T Consensus 241 ~~~li~~~l~~~P~~R~~~-~~ll 263 (267)
T cd06645 241 FHHFVKMALTKNPKKRPTA-EKLL 263 (267)
T ss_pred HHHHHHHHccCCchhCcCH-HHHh
Confidence 8999999999999999999 6654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=279.84 Aligned_cols=222 Identities=26% Similarity=0.484 Sum_probs=177.8
Q ss_pred CCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.+|...+.||.|+||.||+|.+. +..+|+|.+..... ....|.+|++++++++||||+++++++. ...++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 35777889999999999999876 67899999875432 3567999999999999999999999984 46789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++... ...+++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||...
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 99999998532 2468899999999999999999999 789999999999999999999999997421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+.++.++|||||||++|+|++ |.+||.........-......... .|...+..+.
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 231 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY------KPRLASQSVY 231 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC------CCCCCCHHHH
Confidence 1345668999999999999998 999996544322111111000111 1222457899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
+|+.+||..+|.+||++ .++++.|
T Consensus 232 ~l~~~~l~~~p~~Rp~~-~~~l~~l 255 (256)
T cd05112 232 ELMQHCWKERPEDRPSF-SLLLHQL 255 (256)
T ss_pred HHHHHHcccChhhCCCH-HHHHHhh
Confidence 99999999999999999 7787765
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=320.55 Aligned_cols=233 Identities=22% Similarity=0.320 Sum_probs=183.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...++||+|+||.||+|... +..||||++....... ...|.+|+.++++++||||+++++++. +..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47888999999999999999875 5789999997643222 356899999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 601 EYLPNGSLEDRLSCKD--------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
||++||+|.+++.... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885311 12346778889999999999999999 799999999999999999999999998
Q ss_pred ccc-------------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH
Q 003033 673 FLA-------------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 709 (855)
Q Consensus 673 ~~~-------------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~ 709 (855)
+.. +..++.++|||||||++|||+||++||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 532 1234668999999999999999999996543222
Q ss_pred HHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 710 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 710 ~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.... .. ...+....-....+..+.+++.+||..||++||+..++++..|+....
T Consensus 239 i~~~-~~---i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYR-DV---ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhh-hh---ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 11 111111000113446789999999999999999888999888887644
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-32 Score=299.14 Aligned_cols=216 Identities=23% Similarity=0.293 Sum_probs=168.0
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHH-HHHhcCCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||+|... +..||||++..... .....+..|.. +++.++||||+++++.+. +..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999885 68899999975422 22344556655 467899999999999883 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|..++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 999998853 3468899999999999999999999 899999999999999999999999998432
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|.+||...+........ .... ...+...+..+.+|+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i--~~~~-----~~~~~~~~~~~~~li 227 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI--LNKP-----LRLKPNISVSARHLL 227 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHH--HcCC-----CCCCCCCCHHHHHHH
Confidence 234677899999999999999999999765433211111 0000 112223457799999
Q ss_pred HHhhccCCCCCCChHHHHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl~~L 762 (855)
.+||+.||.+||+....+.++|
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~il 249 (323)
T cd05575 228 EGLLQKDRTKRLGAKDDFLEIK 249 (323)
T ss_pred HHHhhcCHHhCCCCCCCHHHHH
Confidence 9999999999999843333333
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=280.12 Aligned_cols=224 Identities=28% Similarity=0.368 Sum_probs=179.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
++|.....||.|+||.||+|... +..+++|++..........+.+|+.++++++||||++++|++ .+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888899999999999999875 478999999876555567899999999999999999999987 34688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++++|.+++... ...++...+..++.|++.||.|||+ ++|+|+||||+||+++.++.+||+|||+.
T Consensus 83 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 157 (262)
T cd06613 83 GGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK 157 (262)
T ss_pred CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence 999999988532 2468899999999999999999998 79999999999999999999999999732
Q ss_pred ----------------ccC---CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 675 ----------------ASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 ----------------~~~---~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
... .++.++|||||||++|+|+||++||.............. .. +.+.....+...+..
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 235 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK-SN-FPPPKLKDKEKWSPV 235 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cc-CCCccccchhhhhHH
Confidence 112 466789999999999999999999976543332221111 10 111111122334577
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+++.+||..+|.+||++ ++|+
T Consensus 236 ~~~li~~~l~~~p~~Rpt~-~~il 258 (262)
T cd06613 236 FHDFIKKCLTKDPKKRPTA-TKLL 258 (262)
T ss_pred HHHHHHHHcCCChhhCCCH-HHHh
Confidence 9999999999999999999 6664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=280.11 Aligned_cols=220 Identities=26% Similarity=0.376 Sum_probs=178.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
++|+..++||.|+||.||+|... +..|++|.+..... ...|.+|+.++++++||||+++++.+. ...+++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57888999999999999999886 47899999875432 678999999999999999999999884 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++++|.+++.. ....+++.....++.+++.||.|||+ .+|+||||+|.||+++.++.+||+|||...
T Consensus 81 ~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (256)
T cd06612 81 GAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK 155 (256)
T ss_pred CCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence 99999999853 23568999999999999999999999 789999999999999999999999997421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
+..++.++|||||||++|+|++|++||............... .......+......+.+
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 231 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK----PPPTLSDPEKWSPEFND 231 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC----CCCCCCchhhcCHHHHH
Confidence 234567899999999999999999999755443322221110 00011112234567999
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
++.+||+.||.+||++ .+|+
T Consensus 232 ~i~~~l~~~P~~Rps~-~~il 251 (256)
T cd06612 232 FVKKCLVKDPEERPSA-IQLL 251 (256)
T ss_pred HHHHHHhcChhhCcCH-HHHh
Confidence 9999999999999999 6664
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-32 Score=296.97 Aligned_cols=214 Identities=21% Similarity=0.299 Sum_probs=171.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcC-CCcceeEeceec--CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV~ 600 (855)
+|+..+.||+|+||.||++... +..||||++.... ......+..|+.++..+. ||+|+.+++++. +..+|||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4777889999999999999876 5789999997542 223456788999998886 577788888773 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 99999999999843 2468999999999999999999999 799999999999999999999999998432
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|+||++||............ .. ....+|...+..
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i------~~-~~~~~p~~~~~~ 227 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI------ME-HNVSYPKSLSKE 227 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH------Hh-CCCCCCccCCHH
Confidence 234677899999999999999999999765443211111 00 111344455678
Q ss_pred HHHHHHHhhccCCCCCCChH
Q 003033 736 LANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~ 755 (855)
+.+|+.+||+.+|.+|++..
T Consensus 228 ~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 228 AVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred HHHHHHHHcccCHhhCCCCC
Confidence 99999999999999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=288.72 Aligned_cols=225 Identities=26% Similarity=0.379 Sum_probs=176.7
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
+|+..+.||+|+||.||++... +..||+|.+..... .....|.+|+.++.+++||||+++++++ .+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5788889999999999999886 68899999875421 1235788999999999999999999987 45688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc-------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS------- 676 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~------- 676 (855)
++++|..++........+++..+..++.+++.||.|||.. .+|+||||||+|||++.++.+||+|||+...
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 9999999885432234689999999999999999999962 4899999999999999999999999984311
Q ss_pred ----------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 677 ----------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 677 ----------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
..++.++|||||||++|+|++|+.||........... +..+........|...+.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 236 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ---LSAIVDGDPPTLPSGYSD 236 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH---HHHHhhcCCCCCCcccCH
Confidence 1236789999999999999999999964332211100 111111112223444667
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.+|+.+||..+|.+||++ .+++
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~-~~l~ 260 (286)
T cd06622 237 DAQDFVAKCLNKIPNRRPTY-AQLL 260 (286)
T ss_pred HHHHHHHHHcccCcccCCCH-HHHh
Confidence 89999999999999999999 5554
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=293.87 Aligned_cols=224 Identities=23% Similarity=0.242 Sum_probs=171.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...++||+|+||.||++... +..||+|++.... ......|..|+.++..++||||+.+++++. +..+|||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999886 4679999986421 122345888999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 999999999999532 3468999999999999999999999 899999999999999999999999998421
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.+.++.++|||||||++|||++|++||................. .......+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~ 233 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE--RFQFPAQV 233 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc--cccCCCcc
Confidence 12357789999999999999999999976554332211100000 00001111
Q ss_pred hhhHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKS--RPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~--RPs~~~evl 759 (855)
...+..+.+|+.+|+..++.+ ||++ .+++
T Consensus 234 ~~~s~~~~~li~~ll~~~~~r~~r~~~-~~~~ 264 (332)
T cd05623 234 TDVSEDAKDLIRRLICSREHRLGQNGI-EDFK 264 (332)
T ss_pred ccCCHHHHHHHHHHccChhhhcCCCCH-HHHh
Confidence 234577899999988665444 5677 5553
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-32 Score=298.55 Aligned_cols=216 Identities=24% Similarity=0.302 Sum_probs=169.0
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHH-HHHhcCCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||+|+||.||+|... +..||+|++..... .....+..|+. +++.++||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999885 57899999875422 22344556654 678899999999999884 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|..++.. ...++......++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 82 ELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 99988843 3457888889999999999999999 799999999999999999999999998532
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
...++.++|||||||++|+|++|.+||...+........ .. ....+|......+.+++.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~-----~~~~~~~~~~~~~~~li~ 228 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI--LH-----KPLQLPGGKTVAACDLLV 228 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHH--hc-----CCCCCCCCCCHHHHHHHH
Confidence 134677899999999999999999999765432211111 00 011234445678999999
Q ss_pred HhhccCCCCCCChHHHHHHHHh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
+||+.||.+||+....+++.++
T Consensus 229 ~~l~~~p~~R~~~~~~~~~~~~ 250 (321)
T cd05603 229 GLLHKDQRRRLGAKADFLEIKN 250 (321)
T ss_pred HHccCCHhhcCCCCCCHHHHhC
Confidence 9999999999987545555444
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=293.60 Aligned_cols=232 Identities=23% Similarity=0.385 Sum_probs=183.5
Q ss_pred CCccccceeeccCceEEEEEEECC---------eEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec--C
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~ 594 (855)
.+|.+.+.||+|+||.||++...+ ..||+|.+..... .....+.+|+.++.++ +||||++++++|. +
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468888999999999999997531 3689998875422 2345789999999999 7999999999984 3
Q ss_pred ceEEEEEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
..+++|||+++|+|.+++.... ....++|..+..++.||+.||.|||. ++|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence 5789999999999999986432 12358899999999999999999999 8999999999999999
Q ss_pred CCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHh
Q 003033 662 ANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALD 713 (855)
Q Consensus 662 ~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~ 713 (855)
.++.+||+|||+.. ...++.++|||||||++|||++ |.+||...........
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 248 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 248 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99999999997432 1235668999999999999998 8899865543222111
Q ss_pred hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 714 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 714 ~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
.. .......+...+..+.+|+.+||+.+|.+||++ .+++..|+.+....
T Consensus 249 ~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~ell~~l~~~~~~~ 297 (334)
T cd05100 249 LK------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTF-KQLVEDLDRVLTVT 297 (334)
T ss_pred HH------cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHhhhc
Confidence 10 111112233445689999999999999999999 89999999886543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=301.61 Aligned_cols=218 Identities=21% Similarity=0.287 Sum_probs=167.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
.+|...+.||+|+||.||++... +..||||... ...+.+|+.+|++|+|||||+++++| ....++||||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 46889999999999999999876 5789999754 23578999999999999999999988 34678999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
. ++|..++... ..+++..++.|+.||+.||.|||+ ++||||||||+|||++.++.+||+|||+..
T Consensus 166 ~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 166 K-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred C-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 4 7898888432 458899999999999999999999 799999999999999999999999998531
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch----------HHHHHHhh-ccc---------
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK----------EVQYALDT-GKL--------- 717 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~----------~~~~~~~~-~~~--------- 717 (855)
...++.++|||||||++|||+||++||.... .....+.. +..
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 1346778999999999999999997763211 00000000 000
Q ss_pred ---cc---------ccCC-CCCCCCh--hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 ---KN---------LLDP-LAGDWPF--VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ---~~---------~~d~-~~~~~p~--~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.. ...+ ....|.. ..+.++.+|+.+||+.||.+||++ ++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta-~elL 374 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSA-EALL 374 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCH-HHHh
Confidence 00 0000 0111111 234578999999999999999999 6664
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=287.01 Aligned_cols=217 Identities=23% Similarity=0.283 Sum_probs=172.6
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
|...+.||+|+||.||+|... ++.||+|.+...... ....+.+|+.+|.+++|+||+.+++++. +..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 666788999999999999886 578999998764322 2345788999999999999999998873 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 9999999888533 23469999999999999999999999 799999999999999999999999998431
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-hcccccccCCCCCCCChhhHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-TGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
+..++.++|||||||++|+|++|.+||........... ...... ....++...+..+.
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 233 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLE----TEEVYSAKFSEEAK 233 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhc----cccccCccCCHHHH
Confidence 23467789999999999999999999975543221111 111111 11123334456789
Q ss_pred HHHHHhhccCCCCCCCh
Q 003033 738 NLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~ 754 (855)
+|+.+||..||.+||++
T Consensus 234 ~li~~~l~~~P~~R~~~ 250 (285)
T cd05632 234 SICKMLLTKDPKQRLGC 250 (285)
T ss_pred HHHHHHccCCHhHcCCC
Confidence 99999999999999995
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=279.66 Aligned_cols=220 Identities=24% Similarity=0.456 Sum_probs=174.8
Q ss_pred CccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC------hhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG------PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~------~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
+|.....||.|+||.||+|... +..+|||.+....... ...+.+|+++|+.++|+||++++++|. +..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3667788999999999999774 5779999987543211 245889999999999999999999984 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... .++++..+..++.|++.||.|||. .+|+|+||+|+||+++.++.+||+|||+..
T Consensus 81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 9999999999998532 358899999999999999999998 789999999999999999999999997431
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++|.+||...+................ ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~ 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP----RL 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC----CC
Confidence 12346789999999999999999999976544332222221111111 12
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+...+..+.+++.+||..+|.+||++ .+++
T Consensus 231 ~~~~~~~~~~~i~~~l~~~p~~Rp~~-~~~l 260 (265)
T cd06631 231 PDSFSAAAIDFVTSCLTRDQHERPSA-LQLL 260 (265)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCCCH-HHHh
Confidence 33455778999999999999999999 5554
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=288.24 Aligned_cols=225 Identities=24% Similarity=0.331 Sum_probs=173.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|...++||.|+||.||+|... +..||+|.+...... ....+.+|+.+++.++||||+++++++. +..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888999999999999999876 578999998754322 3456789999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++ ++|.+++... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 6898888532 3458899999999999999999999 899999999999999999999999998432
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc---------ccccccCC----
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---------KLKNLLDP---- 723 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~---------~~~~~~d~---- 723 (855)
...++.++|||||||++|+|+||++||...+......... .+..++..
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 1235668999999999999999999997554322111000 00000000
Q ss_pred --CCC--------CCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 --LAG--------DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 --~~~--------~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... .+....+..+.+|+.+||..||.+||++ ++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-~eil 284 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA-EEAM 284 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH-HHHh
Confidence 000 0111235678999999999999999999 5553
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=281.29 Aligned_cols=224 Identities=29% Similarity=0.493 Sum_probs=180.7
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC-ceEEEEEecC
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYEYLP 604 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~LV~Ey~~ 604 (855)
..+|...++||+|+||.||++.+. +..+|+|.+.... .....|.+|+.++++++|+||+++++.+.+ ..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence 457888999999999999999865 4679999887542 235678999999999999999999998754 5789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++... ....+++..+..++.+++.||.|||. .+++||||||+||+++.++.+||+|||...
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 84 KGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred CCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 99999998543 23458899999999999999999998 799999999999999999999999997321
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+.++.++|||||||++|+++| |++||....... ..+..+. .. ..+...+..
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~ 231 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----RM----PRPENCPEE 231 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC----CC----CCcccCCHH
Confidence 1235668999999999999999 999997544322 1222111 01 112234567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+.+++.+||..+|.+||++ .++...|+.
T Consensus 232 ~~~~i~~~l~~~p~~Rp~~-~~l~~~L~~ 259 (260)
T cd05073 232 LYNIMMRCWKNRPEERPTF-EYIQSVLDD 259 (260)
T ss_pred HHHHHHHHcccCcccCcCH-HHHHHHHhc
Confidence 9999999999999999999 889888874
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=288.80 Aligned_cols=220 Identities=26% Similarity=0.382 Sum_probs=177.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.+|...+.||.|+||.||+|... +..||+|.+..........+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57888899999999999999864 6889999998665555677889999999999999999999884 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.. ..+++..+..++.+++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 99 ~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 99999999842 358899999999999999999999 799999999999999999999999997431
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|++|.+||............... .......|...+..+.+
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 247 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPELQNPERLSAVFRD 247 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC----CCCCCCCccccCHHHHH
Confidence 233567899999999999999999999654432221111000 00111123344567899
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
|+.+||..+|.+||++ .+++
T Consensus 248 li~~~l~~~p~~Rps~-~~il 267 (297)
T cd06656 248 FLNRCLEMDVDRRGSA-KELL 267 (297)
T ss_pred HHHHHccCChhhCcCH-HHHh
Confidence 9999999999999999 5554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=283.79 Aligned_cols=225 Identities=24% Similarity=0.438 Sum_probs=181.8
Q ss_pred CCccccceeeccCceEEEEEEEC--C----eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
.+|...+.||+|+||.||+|.+. + ..||+|.+...... ....+.+|+.+|.+++||||++++++|. +..++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 46778889999999999999864 2 35899998765432 2457889999999999999999999884 567899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 87 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 87 TQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 9999999999998532 3458999999999999999999999 799999999999999999999999997431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|||++ |++||........ .+..+. ....|
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 233 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE--------RLPQP 233 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC--------CCCCC
Confidence 1345668999999999999999 9999976543321 111111 11122
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+..+.+++.+||..+|..||++ .+++..|..+.
T Consensus 234 ~~~~~~~~~~~~~~l~~~p~~Rp~~-~~l~~~l~~~~ 269 (279)
T cd05057 234 PICTIDVYMVLVKCWMIDAESRPTF-KELINEFSKMA 269 (279)
T ss_pred CCCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHH
Confidence 3344678999999999999999999 78999888763
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-32 Score=299.77 Aligned_cols=209 Identities=24% Similarity=0.334 Sum_probs=166.8
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||+|... +..||||++..... .....+.+|+.++.++ +||||+.+++++. +..+|||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999876 47899999986432 2234578999999988 6999999999884 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|..++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 999988843 2468999999999999999999999 899999999999999999999999997432
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch------HHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITK------EVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~------~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|+||++||.... ........ +. .....+|...+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~-----~~-~~~~~~p~~~~~ 228 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV-----IL-EKPIRIPRFLSV 228 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-----HH-hCCCCCCCCCCH
Confidence 2346778999999999999999999995321 11111110 00 011123444567
Q ss_pred HHHHHHHHhhccCCCCCCCh
Q 003033 735 QLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+.+++.+||..||.+||+.
T Consensus 229 ~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHHhccCHHHcCCC
Confidence 88999999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-32 Score=288.97 Aligned_cols=226 Identities=23% Similarity=0.341 Sum_probs=178.9
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecC--CCCCChhhHHHHHHHHHhcCCCcceeEeceec------
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------ 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~--~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------ 593 (855)
......|...+.||+|+||.|..+..+ +..||||++.. ......++..+|+.+|+.++|+||+.+++.+.
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 344556777889999999999999876 68899999873 23334677889999999999999999999872
Q ss_pred -CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
...|+|+|+| ..+|...++ ....|+......++.||+.||.|+|+ .+|+||||||.|+|++.+..+||+|||
T Consensus 98 f~DvYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred cceeEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEecccc
Confidence 2579999999 678999984 33458899999999999999999999 799999999999999999999999998
Q ss_pred ccc----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc--------
Q 003033 673 FLA----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-------- 716 (855)
Q Consensus 673 ~~~----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-------- 716 (855)
++. ...||...||||.||||.||++|+|.|.+.+.+.+.-..-.
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 643 23478899999999999999999999987776544321100
Q ss_pred ---------cccccC--C------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 717 ---------LKNLLD--P------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 717 ---------~~~~~d--~------~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
....+. | ....+| .......+|+.+||..||.+|+|. ++.
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita-~eA 307 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITA-EEA 307 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCH-HHH
Confidence 001111 0 011122 344678999999999999999999 544
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=289.76 Aligned_cols=226 Identities=23% Similarity=0.346 Sum_probs=173.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
++|...++||+|+||.||++... +..+|+|.+...... ....+.+|++++.+++||||++++++| .+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999876 467899998754221 234688999999999999999999998 4568899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ..+++.....++.|++.||.|||+. .+|+||||||.|||++.++.+||+|||+..
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccccc
Confidence 9999999998532 4688999999999999999999972 479999999999999999999999997421
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-cccccC----------------
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-LKNLLD---------------- 722 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-~~~~~d---------------- 722 (855)
+..++.++|||||||++|+|+||++||.............. ......
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
T cd06615 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPR 235 (308)
T ss_pred ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccc
Confidence 23467789999999999999999999864332211110000 000000
Q ss_pred -------------CCCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 -------------PLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 -------------~~~~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..| ...+..+.+|+.+||..+|.+||++ .+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~ll 285 (308)
T cd06615 236 PMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADL-KELT 285 (308)
T ss_pred hhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 0000001 1234579999999999999999999 5554
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=285.94 Aligned_cols=221 Identities=24% Similarity=0.385 Sum_probs=178.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
..+|.....||.|+||.||+|... +..||||.+..........+.+|+.+++.++||||++++++|. +..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 346888899999999999999864 6889999997665555677899999999999999999999883 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|..++.. ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||+..
T Consensus 98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 999999998842 358999999999999999999999 799999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|++|++||............... .... ...+...+..+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~ 246 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--GTPE--LQNPEKLSPIFR 246 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CCcc--cCCcccCCHHHH
Confidence 223567899999999999999999999766543322211110 0011 112333456799
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||..||.+||++ .+++
T Consensus 247 ~li~~~l~~dp~~Rpt~-~~il 267 (296)
T cd06655 247 DFLNRCLEMDVEKRGSA-KELL 267 (296)
T ss_pred HHHHHHhhcChhhCCCH-HHHh
Confidence 99999999999999999 5553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=282.10 Aligned_cols=225 Identities=27% Similarity=0.461 Sum_probs=179.1
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC--ceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~ 597 (855)
.+|.....||.|+||.||+|... ...|++|.+...... ....|.+|+.+|++++||||++++++|.+ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999864 256999998754433 24679999999999999999999999854 678
Q ss_pred EEEEecCCCCHHHHhcccCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 598 LVYEYLPNGSLEDRLSCKDNS------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
+||||+++|+|.+++...... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998643311 268999999999999999999998 78999999999999999999999999
Q ss_pred cccc--------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHH--HhhcccccccC
Q 003033 672 EFLA--------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGKLKNLLD 722 (855)
Q Consensus 672 g~~~--------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~--~~~~~~~~~~d 722 (855)
|+.. .+.++.++|||||||++|+|++ |.+||......... ...+.+. .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~---~ 238 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE---L 238 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcC---C
Confidence 7532 2335667999999999999999 88898643332211 1111111 0
Q ss_pred CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 723 ~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
..+...+..+.+++.+||..+|.+||++ .+++..|.
T Consensus 239 ----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-~~~l~~l~ 274 (275)
T cd05046 239 ----PVPEGCPSRLYKLMTRCWAVNPKDRPSF-SELVSALG 274 (275)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHhc
Confidence 1122345789999999999999999999 78877764
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-32 Score=303.91 Aligned_cols=215 Identities=29% Similarity=0.464 Sum_probs=179.4
Q ss_pred ceeeccCceEEEEEEECCe--EEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEecCCCCHH
Q 003033 534 LKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLE 609 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~~--~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey~~~GsL~ 609 (855)
-.||+|.||+||-|++..+ .+|||.+........+-+..||.+.++|+|.|||+++|.|.+ .+-|+||-+|||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 3699999999999998764 579999987766667778899999999999999999999965 355899999999999
Q ss_pred HHhcccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-CCCcEEEeeccc-------------
Q 003033 610 DRLSCKDNSPPL--SWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFEF------------- 673 (855)
Q Consensus 610 ~~L~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~~KL~DFg~------------- 673 (855)
++|..+- +|| .+.+.-.+..||++||.|||. +.|||||||-+|||++ -.|.+||+|||-
T Consensus 661 sLLrskW--GPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred HHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 9996543 456 778888999999999999999 7899999999999996 579999999972
Q ss_pred ------------c--ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH-hhcccccccCCCCCCCChhhHHHHHH
Q 003033 674 ------------L--ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL-DTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 674 ------------~--~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~-~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
+ ....|+..+|||||||++.||.||+|||......+.++ ..|-+. ..++.|...+.+...
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK-----vHP~iPeelsaeak~ 810 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK-----VHPPIPEELSAEAKN 810 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee-----cCCCCcHHHHHHHHH
Confidence 1 12458899999999999999999999996554444433 333222 234678888999999
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
++++|+++||.+||++ ++++
T Consensus 811 FilrcFepd~~~R~sA-~~LL 830 (1226)
T KOG4279|consen 811 FILRCFEPDPCDRPSA-KDLL 830 (1226)
T ss_pred HHHHHcCCCcccCccH-HHhc
Confidence 9999999999999999 6664
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=295.75 Aligned_cols=223 Identities=21% Similarity=0.327 Sum_probs=170.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--------C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~ 594 (855)
.++|...+.||+|+||.||++... +..||||++.... ......+.+|+.+++.++||||+++++++. .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 468999999999999999999875 5789999997542 223456889999999999999999999873 1
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 100 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 36899999965 5666653 237888899999999999999999 89999999999999999999999999843
Q ss_pred c------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH---hh-c-----------
Q 003033 675 A------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL---DT-G----------- 715 (855)
Q Consensus 675 ~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~---~~-~----------- 715 (855)
. +..++.++|||||||++|+|+||++||...+...... .. +
T Consensus 171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
T cd07876 171 RTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQ 250 (359)
T ss_pred cccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 1 2346778999999999999999999997554321100 00 0
Q ss_pred -cccccc-----------CCCCCCC--------ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 716 -KLKNLL-----------DPLAGDW--------PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 716 -~~~~~~-----------d~~~~~~--------p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...... ......| +...+..+.+|+.+||..||.+||++ .+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-~e~l 313 (359)
T cd07876 251 PTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV-DEAL 313 (359)
T ss_pred HHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH-HHHh
Confidence 000000 0000111 11234678999999999999999999 6664
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=290.91 Aligned_cols=223 Identities=19% Similarity=0.262 Sum_probs=170.0
Q ss_pred cceeecc--CceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 533 SLKIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 533 ~~~LG~G--~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
..+||+| +||+||++..+ +..||||.+....... ...+.+|+.+++.++||||++++++| .+..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 78899999876 5789999997653222 34577899999999999999999998 456889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
+|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.++++||+..
T Consensus 83 ~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 83 YGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999985322 2358999999999999999999999 79999999999999999999999998420
Q ss_pred ----------------------cc--CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccccCC-----
Q 003033 675 ----------------------AS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDP----- 723 (855)
Q Consensus 675 ----------------------~~--~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--~~~~~~~~d~----- 723 (855)
.. ..++.++|||||||++|+|++|++||........... .+.....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 01 2467899999999999999999999975432221111 1111111000
Q ss_pred --------------------------------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 724 --------------------------------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 724 --------------------------------~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
....+.......+.+|+.+||+.||.+||++ +++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-~ell~ 306 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSA-STLLN 306 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCH-HHHhc
Confidence 0001111234679999999999999999999 66643
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=283.88 Aligned_cols=225 Identities=26% Similarity=0.361 Sum_probs=169.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhc---CCCcceeEeceecC-------
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI---RHPNLVTLVGACPE------- 594 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~~------- 594 (855)
+|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.++..+ +||||++++++|..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778889999999999999876 578999998764322 234567888888776 69999999998732
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||++ ++|.+++... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 3689999997 5898888543 23458999999999999999999999 79999999999999999999999999743
Q ss_pred c------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------ccc--
Q 003033 675 A------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKN-- 719 (855)
Q Consensus 675 ~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~---------~~~-- 719 (855)
. +..++.++|||||||++|+|++|++||.............. +..
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 1 23467789999999999999999999965543221111000 000
Q ss_pred -----ccCCCC----CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 -----LLDPLA----GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 -----~~d~~~----~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.. ..+....+..+.+|+.+||+.||.+||++ .+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~~~l 283 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISA-FRAL 283 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCH-HHHh
Confidence 000000 00111234678999999999999999998 5554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=287.90 Aligned_cols=218 Identities=23% Similarity=0.297 Sum_probs=171.5
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
|+..+.||+|+||.||++... ++.||||.+....... ...+.+|+.++.+++|+||+.+++.+. +..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667788999999999999886 5789999987643222 245778999999999999999999884 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||+..
T Consensus 82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 9999999988533 23458999999999999999999998 799999999999999999999999998532
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|++|++||......... .............++...+..+.+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKEVQEEYSEKFSPDARS 234 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH---HHHHhhhhhhhhhcCccCCHHHHH
Confidence 234677899999999999999999999753211000 000011111111223344567999
Q ss_pred HHHHhhccCCCCCCCh
Q 003033 739 LAMRCCEMSRKSRPEL 754 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~ 754 (855)
|+.+||+.||.+||++
T Consensus 235 li~~~l~~~p~~R~s~ 250 (285)
T cd05630 235 LCKMLLCKDPKERLGC 250 (285)
T ss_pred HHHHHhhcCHHHccCC
Confidence 9999999999999994
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=295.70 Aligned_cols=225 Identities=19% Similarity=0.271 Sum_probs=171.9
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-------- 593 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------- 593 (855)
..++|...+.||+|+||.||++... +..||||.+...... ....+.+|+.+++.++||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3468999999999999999999765 578999999754322 2456789999999999999999999873
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
...++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 136899999964 6776663 247888999999999999999999 8999999999999999999999999984
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----c----------
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G---------- 715 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~---------- 715 (855)
.. +..++.++|||||||++|+|++|+.||...+........ +
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 32 234677899999999999999999999765432211000 0
Q ss_pred --cccccc-------------------CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 716 --KLKNLL-------------------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 716 --~~~~~~-------------------d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...... -+....++...+..+.+|+.+||..||.+||++ .++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~-~ell~ 310 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-DEALQ 310 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH-HHHhc
Confidence 000000 000011122234678999999999999999999 66643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=282.75 Aligned_cols=233 Identities=26% Similarity=0.330 Sum_probs=183.3
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec-
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP- 593 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~- 593 (855)
+.+.++..++++|.....||+|+||.||++... +..+|+|.+.... .....+.+|+.++.++ +||||++++++|.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 556777788999999999999999999999875 5789999986532 2345678999999999 7999999999873
Q ss_pred ------CceEEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 594 ------EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 594 ------~~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||. .+|+||||||+|||++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence 2478999999999999988532 223468999999999999999999998 799999999999999999999
Q ss_pred EEeeccccc--------------------c----------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc
Q 003033 667 KLSDFEFLA--------------------S----------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 716 (855)
Q Consensus 667 KL~DFg~~~--------------------~----------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~ 716 (855)
||+|||+.. . ..++.++|||||||++|+|++|++||..............
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 247 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR 247 (291)
T ss_pred EEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc
Confidence 999997421 0 0146789999999999999999999976544333222110
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...... ..+......+.+|+.+||..+|.+||++ .+++
T Consensus 248 --~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~-~~il 285 (291)
T cd06639 248 --NPPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSV-THLL 285 (291)
T ss_pred --CCCCCC--CcccccCHHHHHHHHHHhhcChhhCcCH-HHHh
Confidence 000000 1122234579999999999999999999 6654
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=281.48 Aligned_cols=219 Identities=26% Similarity=0.468 Sum_probs=174.5
Q ss_pred eeeccCceEEEEEEECC--------eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 535 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~--------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.||+|+||.||+|.... ..||||.+..... .....|.+|+.+++.++||||++++++|. +..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998753 4699998865432 34567899999999999999999999884 4688999999
Q ss_pred CCCCHHHHhcccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-----cEEEeecccc
Q 003033 604 PNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-----VSKLSDFEFL 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-----~~KL~DFg~~ 674 (855)
++|+|.+++.... ....+++..+..++.+++.||.|||+ .+++|+||||+|||++.++ .+||+|||+.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999985321 23458899999999999999999998 7899999999999999877 8999999853
Q ss_pred c---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCC
Q 003033 675 A---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG 726 (855)
Q Consensus 675 ~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~ 726 (855)
. .+.++.++|||||||++|+|+| |.+||............. .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~------~~~~~ 232 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT------AGGRL 232 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh------cCCcc
Confidence 2 2346778999999999999998 999996544322211110 01111
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
..+...+..+.+|+.+||..+|.+||++ +++++.|+
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~ 268 (269)
T cd05044 233 QKPENCPDKIYQLMTNCWAQDPSERPTF-DRIQEILQ 268 (269)
T ss_pred CCcccchHHHHHHHHHHcCCCcccCCCH-HHHHHHHh
Confidence 2233456789999999999999999999 88888875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=280.65 Aligned_cols=226 Identities=24% Similarity=0.408 Sum_probs=176.7
Q ss_pred ccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC--------
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 594 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------- 594 (855)
|...+.||+|+||.||+|.+. +..||||++...... ..+.+.+|+.+|+.++||||+++++++..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455678999999999999864 467999999765322 24568899999999999999999998721
Q ss_pred ceEEEEEecCCCCHHHHhccc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 595 VWTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~---~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
..+++++|+++|+|.+++... .....+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 246899999999999887422 122358899999999999999999998 79999999999999999999999999
Q ss_pred cccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCC
Q 003033 672 EFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDP 723 (855)
Q Consensus 672 g~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~ 723 (855)
|+.. ...++.++|||||||++|+|++ |++||................
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~----- 232 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN----- 232 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-----
Confidence 8532 1224667999999999999999 899997554432111110000
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...++...+..+.+++.+||..+|.+||++ .+++..|+.+
T Consensus 233 -~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~-~~~~~~l~~~ 272 (273)
T cd05074 233 -RLKQPPDCLEDVYELMCQCWSPEPKCRPSF-QHLRDQLELI 272 (273)
T ss_pred -cCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence 011223345789999999999999999999 8899988865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=285.41 Aligned_cols=220 Identities=24% Similarity=0.350 Sum_probs=169.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
+|+..++||+|+||.||+|... +..||+|.+..... .....|.+|+.++.+++||||++++++| .+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5777889999999999999874 57899999875422 2245688999999999999999999988 45688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|..+. .+++.....++.|++.||.|||+ .+|+|+||||+|||++.++.+||+|||+..
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~ 151 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAK 151 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccccc
Confidence 999996543 36788889999999999999999 899999999999999999999999998431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH-HhhcccccccCCCCCCCC-hhhHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA-LDTGKLKNLLDPLAGDWP-FVQAEQLAN 738 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~-~~~~~~~~~~d~~~~~~p-~~~~~~l~~ 738 (855)
...++.++|||||||++|+|++|+.||......... ........+.+......+ ...+..+.+
T Consensus 152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (279)
T cd06619 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVH 231 (279)
T ss_pred CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHH
Confidence 234677899999999999999999999532111000 000000011111111111 123467899
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
++.+||+.+|.+||++ ++++
T Consensus 232 li~~~l~~~P~~Rp~~-~eil 251 (279)
T cd06619 232 FITQCMRKQPKERPAP-ENLM 251 (279)
T ss_pred HHHHHhhCChhhCCCH-HHHh
Confidence 9999999999999999 6654
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=277.83 Aligned_cols=221 Identities=22% Similarity=0.328 Sum_probs=176.6
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
+|+..++||.|+||.||++... +..||+|.++... ......+.+|+.+++.++||||+++++.+. +..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4777889999999999999875 5789999986432 223567889999999999999999999884 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++... ....+++.....++.+++.||.|||+ ++|+|+||||.|||++.++.++|+|||...
T Consensus 81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 999999988532 23458899999999999999999999 899999999999999999999999997421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++||||||+++|+|++|.+||...+......... .....+ .|...+..+.+
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~ 230 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKP----LPSHYSYELRS 230 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCC----CCcccCHHHHH
Confidence 1335678999999999999999999997655433221111 111111 22234467899
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
|+.+||+.||.+||++ .+++.
T Consensus 231 li~~~l~~~P~~Rp~~-~~il~ 251 (255)
T cd08219 231 LIKQMFKRNPRSRPSA-TTILS 251 (255)
T ss_pred HHHHHHhCCcccCCCH-HHHhh
Confidence 9999999999999999 66643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=296.96 Aligned_cols=224 Identities=25% Similarity=0.390 Sum_probs=187.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceecC--c-eEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE--V-WTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~-~~LV 599 (855)
.++|..++.||+|+||.++..+.+ .+.+++|.+....... +....+|+.++++++|||||.+++.|.+ . .|||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999877655 5789999998765443 3457889999999999999999999843 3 7899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc------
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------ 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------ 673 (855)
|+||+||+|.+.+...+ ...++...+..++.|++.|+.|||+ +.|+|||||+.||+++.++.+||+|||+
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999996544 4568999999999999999999998 7899999999999999999999999973
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+.+.+|+.|+|||||||++|||++=+++|...+........ +.....|+ |...+.
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki--~~~~~~Pl----p~~ys~ 232 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKI--NRGLYSPL----PSMYSS 232 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHH--hhccCCCC----CccccH
Confidence 34567899999999999999999999999877765544433 22233443 445568
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRV 761 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~ 761 (855)
++..|+..|+..+|..||++ .+++..
T Consensus 233 el~~lv~~~l~~~P~~RPsa-~~LL~~ 258 (426)
T KOG0589|consen 233 ELRSLVKSMLRKNPEHRPSA-LELLRR 258 (426)
T ss_pred HHHHHHHHHhhcCCccCCCH-HHHhhC
Confidence 89999999999999999999 666654
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=286.55 Aligned_cols=225 Identities=22% Similarity=0.273 Sum_probs=177.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||++... +..||||.+..... .....+.+|+.++..++||||+++++.+. +..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999876 47899999876532 22456889999999999999999999884 3578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 99999999999953 2468999999999999999999999 799999999999999999999999998532
Q ss_pred -----------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 003033 676 -----------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 720 (855)
Q Consensus 676 -----------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~ 720 (855)
...++.++|||||||++|+|++|..||........ .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~-~~~~~~~~~ 233 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDDI 233 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccc
Confidence 12356789999999999999999999965433221 111100111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
..+.. +...+..+.+|+.+||..+|.+||+. ..+.+.|+
T Consensus 234 ~~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~-~~~~~ll~ 272 (305)
T cd05609 234 EWPEG---DEALPADAQDLISRLLRQNPLERLGT-GGAFEVKQ 272 (305)
T ss_pred CCCCc---cccCCHHHHHHHHHHhccChhhccCc-cCHHHHHh
Confidence 11111 11345678999999999999999997 44555555
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=295.73 Aligned_cols=216 Identities=24% Similarity=0.279 Sum_probs=167.4
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHH-HHHhcCCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||+|+||.||++... +..||||++..... .....+..|.. +++.++||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 35999999999999875 67899999975421 22345666665 467799999999999883 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|..++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 999988843 3468999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|.+||...+........ .... ...+...+..+.+++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~ll 227 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI--LHKP-----LVLRPGASLTAWSIL 227 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH--HcCC-----ccCCCCCCHHHHHHH
Confidence 234677899999999999999999999765433211111 0000 011223456788999
Q ss_pred HHhhccCCCCCCChHHHHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl~~L 762 (855)
.+|+..+|.+||++...+.+++
T Consensus 228 ~~ll~~~p~~R~~~~~~~~~i~ 249 (325)
T cd05604 228 EELLEKDRQRRLGAKEDFLEIQ 249 (325)
T ss_pred HHHhccCHHhcCCCCCCHHHHh
Confidence 9999999999999843333333
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=285.52 Aligned_cols=228 Identities=24% Similarity=0.360 Sum_probs=177.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|+..+.||+|+||.||++... +..||+|++..... .....|.+|++++..++||||+++++++. +..+|||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46788889999999999999876 67899999875432 23567899999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.. ..++++.....++.+++.||.|||+. ++|+||||||+|||++.++.++|+|||+..
T Consensus 85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 999999998843 34689999999999999999999963 479999999999999999999999997431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH----HH-hhcccccccCCCCCCCCh-hhH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY----AL-DTGKLKNLLDPLAGDWPF-VQA 733 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~----~~-~~~~~~~~~d~~~~~~p~-~~~ 733 (855)
.+.++.++|||||||++|+|+||++||........ .. ....+..+........+. ..+
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFP 239 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcC
Confidence 23456789999999999999999999974332100 00 000011111111111222 245
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRV 761 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~ 761 (855)
..+.+|+.+||..||.+||++ ++++..
T Consensus 240 ~~~~~li~~~l~~dp~~Rpt~-~e~~~~ 266 (284)
T cd06620 240 EDLRDFVDACLLKDPTERPTP-QQLCAM 266 (284)
T ss_pred HHHHHHHHHHhcCCcccCcCH-HHHhcC
Confidence 679999999999999999999 777654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=299.17 Aligned_cols=217 Identities=24% Similarity=0.321 Sum_probs=170.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..+.||+|+||.||++... +..||||+++... ......+.+|+.++..++||||+++++.+. +..+|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999875 5789999997532 223456888999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++.. ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++.
T Consensus 81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 99999999999853 3458899999999999999999999 899999999999999999999999998632
Q ss_pred -------------------------------------------------------cCCCCcchhHHHHHHHHHHHHhCCC
Q 003033 676 -------------------------------------------------------SGELTPKSDVYSFGIILLRLLTGRP 700 (855)
Q Consensus 676 -------------------------------------------------------~~~~t~ksDVwSfGvvl~elltG~~ 700 (855)
...++.++|||||||++|||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 1235778999999999999999999
Q ss_pred CCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 701 ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 701 pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
||..................+. ... ....+..+.+|+.+|+ .||.+|++.
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~~-~p~--~~~~s~~~~~li~~l~-~~p~~R~~~ 284 (360)
T cd05627 235 PFCSETPQETYRKVMNWKETLV-FPP--EVPISEKAKDLILRFC-TDSENRIGS 284 (360)
T ss_pred CCCCCCHHHHHHHHHcCCCcee-cCC--CCCCCHHHHHHHHHhc-cChhhcCCC
Confidence 9976554332111111110000 000 1123567888888876 499999974
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=280.45 Aligned_cols=220 Identities=24% Similarity=0.389 Sum_probs=167.4
Q ss_pred eeeccCceEEEEEEECC----eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
.||+|+||.||+|.... ..+++|.+..... .....|.+|+.++..++||||+++++.|. ...++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 59999999999997542 3467777765432 23567999999999999999999999985 45789999999999
Q ss_pred HHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc----------
Q 003033 608 LEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS---------- 676 (855)
Q Consensus 608 L~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~---------- 676 (855)
|.+++.... ....+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999986432 22356777888999999999999998 7899999999999999999999999985310
Q ss_pred ------------------------CCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHH--hhcccccccCCCCCCCC
Q 003033 677 ------------------------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL--DTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 677 ------------------------~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~--~~~~~~~~~d~~~~~~p 729 (855)
..++.++|||||||++|||++ |.+||.......... ..+......+ +.++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 235 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK---PQLE 235 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC---CccC
Confidence 113567999999999999997 577886444322111 1111112222 2223
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
......+.+++..|| .+|.+||++ ++|++.|
T Consensus 236 ~~~~~~~~~l~~~c~-~~P~~Rp~~-~~i~~~l 266 (268)
T cd05086 236 LPYSERWYEVLQFCW-LSPEKRATA-EEVHRLL 266 (268)
T ss_pred CCCcHHHHHHHHHHh-hCcccCCCH-HHHHHHh
Confidence 334567888999999 689999999 7887776
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=294.95 Aligned_cols=224 Identities=21% Similarity=0.282 Sum_probs=171.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
..++|...+.||+|+||.||++... +..||||++..... .....+.+|+.+++.++||||+.+++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3468999999999999999999875 57899999975422 234568899999999999999999998731
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 3689999996 47777763 247888999999999999999999 8999999999999999999999999985
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----c----------
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G---------- 715 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~---------- 715 (855)
.. +..++.++|||||||++|+|++|++||...+........ +
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 32 234677899999999999999999999765432211100 0
Q ss_pred ------------ccc-----cc----cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 716 ------------KLK-----NL----LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 716 ------------~~~-----~~----~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+. .. .-+....++......+.+|+.+||..||.+|||+ ++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~-~e~L 316 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV-DEAL 316 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH-HHHh
Confidence 000 00 0000011111234578999999999999999999 6664
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=275.85 Aligned_cols=218 Identities=29% Similarity=0.485 Sum_probs=175.8
Q ss_pred ceeeccCceEEEEEEEC-CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCHH
Q 003033 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLE 609 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL~ 609 (855)
++||+|+||.||++... +..||+|.+...... ....|.+|++++++++||||+++++++. ...++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999876 688999998765433 3457899999999999999999999884 3578999999999999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------------
Q 003033 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------------- 675 (855)
Q Consensus 610 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------------- 675 (855)
+++... ...+++.....++.+++.||.|||+ ++++||||||+|||++.++.+||+|||+..
T Consensus 81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 998532 2368899999999999999999998 799999999999999999999999997432
Q ss_pred -------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 -------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 -------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
.+.++.++|||||||++|+|+| |.+||............... .....|...+..+.+|+.
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~ 229 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG------YRMPAPQLCPEEIYRLML 229 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC------CCCCCCccCCHHHHHHHH
Confidence 2345678999999999999999 88998654432211111100 011123345678999999
Q ss_pred HhhccCCCCCCChHHHHHHHHh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
+||..+|.+||++ .+++..|+
T Consensus 230 ~~l~~~p~~Rp~~-~ell~~l~ 250 (251)
T cd05041 230 QCWAYDPENRPSF-SEIYNELQ 250 (251)
T ss_pred HHhccChhhCcCH-HHHHHHhh
Confidence 9999999999999 88888775
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=278.29 Aligned_cols=227 Identities=29% Similarity=0.397 Sum_probs=179.0
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceecC------
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE------ 594 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~------ 594 (855)
...+++|+..+.||.|+||.||+|... +..+++|++..... ....|.+|+.+++++ .||||++++++|.+
T Consensus 2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 356789999999999999999999885 47899999876533 346789999999999 69999999999832
Q ss_pred --ceEEEEEecCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 595 --VWTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 595 --~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCC
Confidence 3689999999999999885322 23568999999999999999999999 79999999999999999999999999
Q ss_pred cccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 003033 672 EFLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 672 g~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
|... ...++.++|||||||+||+|++|.+||............. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~- 234 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIP--RNP- 234 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhh--ccC-
Confidence 7421 1124667999999999999999999996543332222111 000
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+ ....+...+..+.+|+.+||..||.+||++ .+++
T Consensus 235 ~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-~~ll 270 (275)
T cd06608 235 PP-TLKSPENWSKKFNDFISECLIKNYEQRPFM-EELL 270 (275)
T ss_pred CC-CCCchhhcCHHHHHHHHHHhhcChhhCcCH-HHHh
Confidence 00 111122245679999999999999999999 6664
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=297.95 Aligned_cols=219 Identities=24% Similarity=0.311 Sum_probs=171.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||++... +..||+|++.... ......+.+|+.+++.++||||+++++++. +..++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 457888999999999999999886 5789999986432 123445889999999999999999999884 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc---
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS--- 676 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~--- 676 (855)
|||+++|+|.+++.. ..+++.....++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 122 ~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 122 MEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 999999999999842 247888999999999999999999 8999999999999999999999999984310
Q ss_pred ---------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC-CCCCC
Q 003033 677 ---------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP-LAGDW 728 (855)
Q Consensus 677 ---------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~-~~~~~ 728 (855)
+.++.++|||||||+||+|+||++||............ .+. ....+
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i------~~~~~~~~~ 268 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI------MDHKNSLNF 268 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCcccCC
Confidence 12567899999999999999999999765543221111 110 01122
Q ss_pred Ch--hhHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 003033 729 PF--VQAEQLANLAMRCCEMSRKS--RPELGKDVW 759 (855)
Q Consensus 729 p~--~~~~~l~~L~~~Cl~~dP~~--RPs~~~evl 759 (855)
|. ..+..+.+++.+|+..++.+ ||++ .+++
T Consensus 269 p~~~~~s~~~~~li~~~L~~~~~r~~R~~~-~e~l 302 (370)
T cd05621 269 PEDVEISKHAKNLICAFLTDREVRLGRNGV-EEIK 302 (370)
T ss_pred CCcccCCHHHHHHHHHHccCchhccCCCCH-HHHh
Confidence 32 34577889999999855443 7887 5554
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=317.33 Aligned_cols=228 Identities=20% Similarity=0.333 Sum_probs=177.0
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec----Cce
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 596 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~ 596 (855)
....+|.+..+||.|+||.||++... +..||+|++...... ....|..|+.+|.+|+|||||+++++|. ..+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34568999999999999999999886 467999998754332 2456889999999999999999999872 357
Q ss_pred EEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----CCceecccccCceeeCC---------
Q 003033 597 TLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKP----HSIVHGDLKPANILLDA--------- 662 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~----~~IvHrDLKp~NILld~--------- 662 (855)
||||||+++|+|.++|... .....+++..++.|+.||+.||.|||...+ .+||||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 8999999999999998532 223469999999999999999999998431 45999999999999954
Q ss_pred --------CCcEEEeeccccc--------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH
Q 003033 663 --------NFVSKLSDFEFLA--------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV 708 (855)
Q Consensus 663 --------~~~~KL~DFg~~~--------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~ 708 (855)
.+.+||+|||+.. ...++.++||||||||||+|+||++||......
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~ 249 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF 249 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH
Confidence 3458999998421 123677899999999999999999999755443
Q ss_pred HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 709 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 709 ~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+... ....... ....+..+.+|+.+||..+|.+||++ .+++
T Consensus 250 ~qli~~l--k~~p~lp----i~~~S~eL~dLI~~~L~~dPeeRPSa-~QlL 293 (1021)
T PTZ00266 250 SQLISEL--KRGPDLP----IKGKSKELNILIKNLLNLSAKERPSA-LQCL 293 (1021)
T ss_pred HHHHHHH--hcCCCCC----cCCCCHHHHHHHHHHhcCChhHCcCH-HHHh
Confidence 3322211 1101100 01235679999999999999999999 5665
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=295.00 Aligned_cols=216 Identities=24% Similarity=0.302 Sum_probs=166.8
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHH-HHHhcCCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||+|+||.||++... +..||+|++..... .....+..|.. +++.++||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 6999999999999886 46799999875321 12234455544 567889999999999883 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++.. ...++......++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 82 ELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 99999853 2457788888899999999999999 899999999999999999999999998532
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
+..++.++|||||||++|+|++|.+||............ ... ....+...+..+.+|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~-----~~~~~~~~~~~~~~li~ 228 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI--LNK-----PLQLKPNITNSARHLLE 228 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHH--HhC-----CcCCCCCCCHHHHHHHH
Confidence 234667899999999999999999999765443221111 000 01122234577999999
Q ss_pred HhhccCCCCCCChHHHHHHHHh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
+||+.||.+||+..+.+.++++
T Consensus 229 ~~l~~~p~~R~~~~~~~~~i~~ 250 (325)
T cd05602 229 GLLQKDRTKRLGAKDDFMEIKN 250 (325)
T ss_pred HHcccCHHHCCCCCCCHHHHhc
Confidence 9999999999998544444443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=280.54 Aligned_cols=225 Identities=27% Similarity=0.371 Sum_probs=173.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|+....||+|+||.||+|... +..||+|.+..... ...+.+.+|+.++++++||||+++++++. ...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999886 57899999865422 22356889999999999999999999884 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++++|..++. ....+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||+..
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 999988887763 23358999999999999999999999 799999999999999999999999997432
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc-ccc----------------
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-KLK---------------- 718 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~-~~~---------------- 718 (855)
...++.++|||||||++|+|++|.+||............. .+.
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 1235678999999999999999999997554332211110 000
Q ss_pred -cccCCC-CCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 -NLLDPL-AGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 -~~~d~~-~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+. ....+ ...+..+.+|+.+||..+|.+||++ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~eil 281 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSC-EELL 281 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCH-HHHh
Confidence 000000 00000 1234678999999999999999999 5554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=289.95 Aligned_cols=223 Identities=22% Similarity=0.270 Sum_probs=169.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||++... +..||+|++.... ......|..|+.++..++||||+.+++++. +..||||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999876 4779999987532 122345788999999999999999999884 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999532 2468899999999999999999999 899999999999999999999999997421
Q ss_pred ---------------------c-----CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 ---------------------S-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 ---------------------~-----~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
. +.++.++|||||||+||+|++|++||..................+ +....+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~- 233 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-QFPSHI- 233 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc-cCCCcc-
Confidence 0 235678999999999999999999997654432211110000000 011111
Q ss_pred hhhHHHHHHHHHHhhccCCCC--CCChHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKS--RPELGKDV 758 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~--RPs~~~ev 758 (855)
...+..+.+|+.+|+..++++ |+++ +++
T Consensus 234 ~~~~~~~~~li~~ll~~~~~~~~~~~~-~~~ 263 (331)
T cd05624 234 TDVSEEAKDLIQRLICSRERRLGQNGI-EDF 263 (331)
T ss_pred ccCCHHHHHHHHHHccCchhhcCCCCH-HHH
Confidence 124578999999999865543 3455 444
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=280.61 Aligned_cols=226 Identities=25% Similarity=0.336 Sum_probs=175.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~ 600 (855)
++|+..++||.|+||.||++... +..||+|.+..... .....+.+|++++++++||||++++++|. ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999885 58899999875433 23457899999999999999999999883 2578999
Q ss_pred EecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
||+++|+|.+++... .....+++.....++.+|+.||.|||. .+++|+||+|.||+++.++.+||+|||+..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999887432 234568899999999999999999999 799999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-----HH--HHHhhcccccccCCCCCCCC
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-----VQ--YALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-----~~--~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|+|++|..||..... .. ..+.......+.+.....
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (287)
T cd06621 158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG-- 235 (287)
T ss_pred cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC--
Confidence 23567789999999999999999999975421 11 111110100110110100
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+++.+||..+|.+||++ .+++
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rpt~-~eil 264 (287)
T cd06621 236 IKWSEEFKDFIKQCLEKDPTRRPTP-WDML 264 (287)
T ss_pred CchHHHHHHHHHHHcCCCcccCCCH-HHHH
Confidence 1234679999999999999999999 5554
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=274.75 Aligned_cols=220 Identities=31% Similarity=0.540 Sum_probs=176.6
Q ss_pred ccccceeeccCceEEEEEEECC------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
|.....||.|+||.||++.... ..||+|.+...... ....+..|+.++..++||||+++++++. +..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456789999999999998864 77999999765443 4568999999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++++|.+++..... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||+..
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999999853221 128999999999999999999999 799999999999999999999999997531
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCChh
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++|||||||++|+|++ |.+||........ ....+.. ...+..
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 228 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--------LPKPEN 228 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--------CCCCCc
Confidence 1235678999999999999998 8899865433222 1111111 112223
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
.+..+.+++.+||..+|.+||++ .++++.|
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rpt~-~~ll~~l 258 (258)
T smart00219 229 CPPEIYKLMLQCWAEDPEDRPTF-SELVEIL 258 (258)
T ss_pred CCHHHHHHHHHHCcCChhhCcCH-HHHHhhC
Confidence 56789999999999999999999 7776543
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=281.16 Aligned_cols=230 Identities=26% Similarity=0.362 Sum_probs=180.2
Q ss_pred chhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 519 ~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
++.++......|+....||.|+||.||+|... +..||+|++.... .....+..|+.++.++ +||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 45566667788999999999999999999885 5789999986543 2345688999999999 6999999999872
Q ss_pred ------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 594 ------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 594 ------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
+..+++|||+++|+|.+++.... ...+++..+..++.||+.||.|||+ ++|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence 35789999999999999885432 3458888899999999999999999 7999999999999999999999
Q ss_pred Eeeccccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc
Q 003033 668 LSDFEFLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL 717 (855)
Q Consensus 668 L~DFg~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~ 717 (855)
|+|||+.. ...++.++|||||||++|+|++|.+||..............
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~- 240 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR- 240 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-
Confidence 99997431 12356689999999999999999999965433222211110
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+ ..-+...+..+.+|+.+||..||.+||++ .+++
T Consensus 241 --~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~ell 277 (282)
T cd06636 241 --NPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPST-EQLL 277 (282)
T ss_pred --CCCC--CCcccccCHHHHHHHHHHhCCChhhCcCH-HHHh
Confidence 0000 00111234679999999999999999998 6664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=275.41 Aligned_cols=218 Identities=27% Similarity=0.417 Sum_probs=176.1
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
|...+.||+|+||.||+|... +..|++|.+...... ..+.|.+|+.+++.++||||+++++++. ...++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 566788999999999999875 688999998754321 2356889999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++++|.+++.. ...+++..+..++.+|+.||.|||+ .+|+|+||+|+||+++.++.+||+|||+..
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 82 ELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999853 2458899999999999999999999 799999999999999999999999997431
Q ss_pred -------------------cCC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -------------------SGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -------------------~~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
... ++.++|+|||||++|+|++|++||................. ....|......
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 230 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-----LPPIPDHLSDE 230 (258)
T ss_pred ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----CCCcCCCcCHH
Confidence 122 56789999999999999999999976554433333222111 11223344578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+++.+||..+|.+||++ .+++
T Consensus 231 ~~~li~~~l~~~p~~Rp~~-~~~l 253 (258)
T cd06632 231 AKDFILKCLQRDPSLRPTA-AELL 253 (258)
T ss_pred HHHHHHHHhhcCcccCcCH-HHHh
Confidence 8999999999999999999 6654
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=305.48 Aligned_cols=230 Identities=21% Similarity=0.301 Sum_probs=170.1
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC------cceeEeceec
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP------NLVTLVGACP 593 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp------nIV~l~g~~~ 593 (855)
++...+++|.+.++||+|+||.||+|... +..||||+++... .....+..|+.++..++|. +|+.++++|.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34455788999999999999999999875 5789999996432 2334567788888887654 5888888873
Q ss_pred ---CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC------
Q 003033 594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF------ 664 (855)
Q Consensus 594 ---~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~------ 664 (855)
...|||||++ +++|.+++... ..+++..+..|+.||+.||.|||+. .+||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccc
Confidence 3578999998 78899888532 4689999999999999999999972 3899999999999998665
Q ss_pred ----------cEEEeecccc----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Q 003033 665 ----------VSKLSDFEFL----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 712 (855)
Q Consensus 665 ----------~~KL~DFg~~----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~ 712 (855)
.+||+|||.. .+..++.++|||||||+||||+||++||..........
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred cccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 4999999832 23457889999999999999999999997654332111
Q ss_pred hh----cccc-------------cccCC---CCC-CCC--------------hhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 713 DT----GKLK-------------NLLDP---LAG-DWP--------------FVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 713 ~~----~~~~-------------~~~d~---~~~-~~p--------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
.. +.+. .+.+. ... ..+ ......+.+|+.+||.+||.+||++ .+
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta-~e 434 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA-RQ 434 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH-HH
Confidence 10 0000 00000 000 000 0123467899999999999999999 66
Q ss_pred HH
Q 003033 758 VW 759 (855)
Q Consensus 758 vl 759 (855)
++
T Consensus 435 ~L 436 (467)
T PTZ00284 435 MT 436 (467)
T ss_pred Hh
Confidence 64
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=282.46 Aligned_cols=218 Identities=27% Similarity=0.383 Sum_probs=174.3
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.|...+.||+|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++||||++++++|. ...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3666778999999999999875 57899999875432 22456889999999999999999999884 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.. ..+++..+..++.+++.||.|||+ ++|+|+||+|+||+++.++.+||+|||+..
T Consensus 85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence 99999998842 458899999999999999999998 799999999999999999999999997421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|||||||++|+|+||++||........... +.......++...+..+.+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 231 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL------IPKNSPPTLEGQYSKPFKE 231 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh------hhcCCCCCCCcccCHHHHH
Confidence 23456789999999999999999999864332221111 0111112233345577999
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
++.+||..+|.+||++ .+++.
T Consensus 232 li~~~l~~~p~~Rp~~-~~il~ 252 (277)
T cd06642 232 FVEACLNKDPRFRPTA-KELLK 252 (277)
T ss_pred HHHHHccCCcccCcCH-HHHHH
Confidence 9999999999999999 66654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=283.02 Aligned_cols=225 Identities=24% Similarity=0.307 Sum_probs=173.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
+|...+.||.|+||.||+|... +..||||.+...... ....+..|++++.+++||||+++++++. +..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3677889999999999999875 578999999765432 2345678999999999999999999984 467899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+ +|+|.+++.... ..+++..+..++.||+.||.|||+ ++|+|+||||+|||++.++.+||+|||+..
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999985322 369999999999999999999999 799999999999999999999999997421
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-c--------------c
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-L--------------K 718 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-~--------------~ 718 (855)
...++.++|||||||++|+|++|.+||.............. + .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 12356789999999999999999998865443221111000 0 0
Q ss_pred cccCC-CCC-----CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 719 NLLDP-LAG-----DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 719 ~~~d~-~~~-----~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..... ... ......+..+.+++.+||..+|++||++ .+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-~e~l~ 281 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITA-RQALE 281 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCH-HHHhh
Confidence 00000 000 0112235678999999999999999999 66643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=276.54 Aligned_cols=219 Identities=25% Similarity=0.400 Sum_probs=173.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhhHHHHHHHHHhcCCCcceeEeceec----Cce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~ 596 (855)
.+|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.++++++||||+++++++. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999875 578999998754321 1245788999999999999999999873 346
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
+++|||+++++|.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+..
T Consensus 82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 799999999999999853 2358899999999999999999998 789999999999999999999999998532
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++|++||.............. .+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~ 230 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-----QPTNPQL 230 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-----CCCCCCC
Confidence 12246689999999999999999999975543332221111 1112234
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
|......+.+++ +||..+|.+||++ ++|+
T Consensus 231 ~~~~~~~~~~li-~~~~~~p~~Rp~~-~eil 259 (266)
T cd06651 231 PSHISEHARDFL-GCIFVEARHRPSA-EELL 259 (266)
T ss_pred chhcCHHHHHHH-HHhcCChhhCcCH-HHHh
Confidence 444556677777 7888999999999 6664
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=280.85 Aligned_cols=225 Identities=27% Similarity=0.400 Sum_probs=171.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|.....||.|+||.||+|... +..||||.+...... ....+.+|++++++++||||+++++++. +..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999875 588999998764322 2345778999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++ ++|.+++... ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~-~~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LD-TDLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CC-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 97 5999988533 2368899999999999999999999 799999999999999999999999998431
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-hcc---------cccccC----
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-TGK---------LKNLLD---- 722 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~-~~~---------~~~~~d---- 722 (855)
...++.++|||||||++|+|++|++||.........+. ... +.....
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 12356789999999999999999999965442111110 000 000000
Q ss_pred -----------CCCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 -----------PLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 -----------~~~~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+....++ ......+.+++.+||+.+|.+||++ .+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~-~e~l 286 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISA-AEAM 286 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCH-HHHh
Confidence 0000000 0112677899999999999999999 5554
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=278.71 Aligned_cols=217 Identities=27% Similarity=0.360 Sum_probs=174.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
+|...+.||.|+||.||+|... +..||+|.+.... ......+.+|+.+++.++||||+++++++. ...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5778889999999999999875 5789999987553 223457889999999999999999999884 4578999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++|+|.+++.. .++++.....++.|++.||.|||+ ++|+||||+|+||+++.++.++|+|||..
T Consensus 82 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 82 GGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 99999999843 268999999999999999999999 79999999999999999999999999732
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh-hHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV-QAEQLA 737 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~-~~~~l~ 737 (855)
....++.++|||||||++|+|+||++||...+......... ....+ ..+.. .+..+.
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~ 228 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP---KNNPP---SLEGNKFSKPFK 228 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh---hcCCC---CCcccccCHHHH
Confidence 12346778999999999999999999996544322211111 00111 11111 456799
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+++.+||..+|.+||++ ++++
T Consensus 229 ~~l~~~l~~~p~~Rpt~-~~il 249 (274)
T cd06609 229 DFVSLCLNKDPKERPSA-KELL 249 (274)
T ss_pred HHHHHHhhCChhhCcCH-HHHh
Confidence 99999999999999999 5654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=282.85 Aligned_cols=225 Identities=25% Similarity=0.358 Sum_probs=173.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|+..++||+|+||.||+|.+. +..||+|.+...... ....+.+|++++..++||||++++++|. +..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999986 578999998654322 2456889999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++++|..+... ...++|..+..++.||+.||.|||+ .+|+||||+|+||+++.++.+||+|||+..
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 9999999887642 2348999999999999999999999 799999999999999999999999997421
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc----ccc-------------
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG----KLK------------- 718 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~----~~~------------- 718 (855)
...++.++|||||||++|+|++|++||............. .+.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 1224678999999999999999999997544322111100 000
Q ss_pred -cccCCCCC------CCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 -NLLDPLAG------DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 -~~~d~~~~------~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+..+... ..+...+..+.+|+.+||..+|.+||++ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~-~~il 281 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS-SQLL 281 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH-HHHh
Confidence 00000000 0011235679999999999999999999 5554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=283.61 Aligned_cols=219 Identities=25% Similarity=0.348 Sum_probs=174.2
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~ 605 (855)
|+....||+|+||.||++... +..||||.+..........+.+|+.++..++||||++++++| .+..++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 344557999999999999874 688999999765555566788999999999999999999987 4568899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
++|..++.. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 103 ~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 103 GALTDIVSQ----TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred CCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 999998742 358899999999999999999999 799999999999999999999999997431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|++||.............. ...+... .+...+..+.+++
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~l~~~i 251 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPPPKLK-NAHKISPVLRDFL 251 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCCCCcc-ccCCCCHHHHHHH
Confidence 23457789999999999999999999975543332211111 0011101 1112346789999
Q ss_pred HHhhccCCCCCCChHHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+||..+|.+||++ .+++.
T Consensus 252 ~~~l~~~P~~Rps~-~~ll~ 270 (297)
T cd06659 252 ERMLTREPQERATA-QELLD 270 (297)
T ss_pred HHHhcCCcccCcCH-HHHhh
Confidence 99999999999999 66643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=295.72 Aligned_cols=224 Identities=24% Similarity=0.299 Sum_probs=173.3
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
+....++|...+.||+|+||.||++... +..||+|++.... ......+.+|+.++..++||||+++++++. +.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3445578999999999999999999886 5789999986432 122345788999999999999999999884 45
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.++||||+++|+|.+++.. ..++...+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 7899999999999999843 247888889999999999999999 899999999999999999999999998531
Q ss_pred c------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 676 S------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 676 ~------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
. +.++.++|||||||++|||++|++||............- .....
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~~~~~-- 265 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM---NHKNS-- 265 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHH---cCCCc--
Confidence 0 125678999999999999999999998665432221110 00011
Q ss_pred CCCC--hhhHHHHHHHHHHhhccCCCC---CCChHHHHHH
Q 003033 726 GDWP--FVQAEQLANLAMRCCEMSRKS---RPELGKDVWR 760 (855)
Q Consensus 726 ~~~p--~~~~~~l~~L~~~Cl~~dP~~---RPs~~~evl~ 760 (855)
..+| ...+..+.+|+.+|+. +|.. ||++ .++++
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~-~ei~~ 303 (371)
T cd05622 266 LTFPDDNDISKEAKNLICAFLT-DREVRLGRNGV-EEIKR 303 (371)
T ss_pred ccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCH-HHHhc
Confidence 1122 2356788999999998 4444 6676 55543
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=278.41 Aligned_cols=218 Identities=25% Similarity=0.372 Sum_probs=176.1
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.|+..++||.|+||.||+|... +..||||.+..... .....|.+|+.++++++||||+++++++. ...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4777888999999999999875 57899999875432 23457889999999999999999999984 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++|+|.+++.. .++++.....++.+++.||.|||+ .+++|+||+|+||+++.++.++|+|||+.
T Consensus 85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 99999998842 358889999999999999999998 79999999999999999999999999743
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
....++.++|||||||++|+|+||.+||............ ........+...+..+.+
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 231 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI------PKNNPPTLTGEFSKPFKE 231 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh------hcCCCCCCchhhhHHHHH
Confidence 1234577899999999999999999999654432211111 001112233456678999
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
|+.+||..+|.+||++ .+++.
T Consensus 232 li~~~l~~~p~~Rp~~-~~il~ 252 (277)
T cd06640 232 FIDACLNKDPSFRPTA-KELLK 252 (277)
T ss_pred HHHHHcccCcccCcCH-HHHHh
Confidence 9999999999999999 66643
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=280.85 Aligned_cols=221 Identities=33% Similarity=0.529 Sum_probs=173.5
Q ss_pred ccccceeeccCceEEEEEEECC--eEEEEEEecCCCCCChh--hHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~--~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
|+..+.||+|+||.||++...+ ..||+|++......... ...+|+.++.+++||||+++++++ ....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5667899999999999999874 57999999876432222 245699999999999999999998 45688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++++|.++|. ....+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++.++|+|||...
T Consensus 81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred cccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 9999999996 23468999999999999999999999 799999999999999999999999998532
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH--HHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++||||||+++|+|++|..||..... ....+............ .........
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 232 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS--QQSREKSEE 232 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT--TSHTTSHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc--cccchhHHH
Confidence 24467789999999999999999999986621 11111111110110000 011112378
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+++.+||+.||.+||++ .+++
T Consensus 233 l~~li~~~l~~~p~~R~~~-~~l~ 255 (260)
T PF00069_consen 233 LRDLIKKMLSKDPEQRPSA-EELL 255 (260)
T ss_dssp HHHHHHHHSSSSGGGSTTH-HHHH
T ss_pred HHHHHHHHccCChhHCcCH-HHHh
Confidence 9999999999999999998 6664
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=276.22 Aligned_cols=219 Identities=23% Similarity=0.352 Sum_probs=174.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhhHHHHHHHHHhcCCCcceeEeceecC----ce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACPE----VW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~ 596 (855)
.+|...+.||+|+||.||+|... +..||||.+...... ....+.+|+.++.+++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999875 578999998643211 13467889999999999999999998743 46
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++|+|.+++... ..+++.....++.+++.||.|||+ .+|+|+||||+|||++.++.+||+|||+..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 7999999999999998532 357888899999999999999999 789999999999999999999999998432
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++|++||............ ...+..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~ 230 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKI-----ATQPTNPVL 230 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHH-----hcCCCCCCC
Confidence 123466899999999999999999999754433222111 111222334
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
|......+.+++.+|+. +|++||++ ++++
T Consensus 231 ~~~~~~~~~~~i~~~l~-~p~~Rp~~-~~il 259 (265)
T cd06652 231 PPHVSDHCRDFLKRIFV-EAKLRPSA-DELL 259 (265)
T ss_pred chhhCHHHHHHHHHHhc-ChhhCCCH-HHHh
Confidence 55566788999999994 99999998 6664
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=273.24 Aligned_cols=218 Identities=23% Similarity=0.341 Sum_probs=175.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--C-ceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--E-VWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~-~~~LV~E 601 (855)
+|+..+.||+|+||.||++... +..||+|.+..... .....+.+|+.++++++|||++++++.+. + ..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999875 47899999875432 23456889999999999999999998874 2 4689999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++++|.+++... ....+++.++..++.+++.||.|||+ ++|+||||||+||+++.++.++|+|||+..
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999998642 23468999999999999999999999 899999999999999999999999997431
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhhHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|++|++||...+..... ...+.+ . ..+...+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~ 228 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL----P----PMPKDYSP 228 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC----C----CCccccCH
Confidence 233567899999999999999999999765432221 111111 1 12334557
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.+|+.+||..+|.+||++ .+++
T Consensus 229 ~~~~li~~~l~~~p~~Rp~~-~~~l 252 (257)
T cd08223 229 ELGELIATMLSKRPEKRPSV-KSIL 252 (257)
T ss_pred HHHHHHHHHhccCcccCCCH-HHHh
Confidence 89999999999999999999 6654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=275.35 Aligned_cols=223 Identities=24% Similarity=0.380 Sum_probs=176.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~ 600 (855)
+|+..+.||.|+||.||++... +..||+|.+...... ....+..|+.++++++||||+++++++. ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4777889999999999999875 578999998754332 2456888999999999999999999762 2468999
Q ss_pred EecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 601 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
||+++|+|.+++... ....++++..+..++.+|+.||.|||... ..+|+|+||||+|||++.++.+||+|||+..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998542 22457999999999999999999999321 1789999999999999999999999997432
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCCh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++||||||+++|+|++|+.||........ .+..+ .....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 232 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG--------KFRRIPY 232 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC--------CCCCCcc
Confidence 12346679999999999999999999976542211 11111 1123344
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+..+.+|+.+||..+|.+||++ .+|++
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~-~~il~ 261 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPST-EELLQ 261 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCH-HHHhh
Confidence 556789999999999999999999 66653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=297.80 Aligned_cols=219 Identities=22% Similarity=0.312 Sum_probs=167.6
Q ss_pred CCccccceeeccCceEEEEEEEC----CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..|.....||+|+||.||++... +..||||.+... ..+.+|+.+|++++|||||++++++. ...|+|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 46889999999999999998764 367999988643 34578999999999999999999884 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+. ++|.+++. ....+++..+..|+.||+.||.|||. ++||||||||+|||++.++.+||+|||+..
T Consensus 167 ~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 167 KYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 995 68888883 33569999999999999999999999 799999999999999999999999998531
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH------HHHHHhh---ccc--------
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDT---GKL-------- 717 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~------~~~~~~~---~~~-------- 717 (855)
...++.++|||||||++|||++|+.||..... ....+.. ...
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 13467789999999999999999999854321 1111100 000
Q ss_pred ------ccccCCCCCCCC-------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 ------KNLLDPLAGDWP-------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ------~~~~d~~~~~~p-------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..........++ ......+.+|+.+||..||.+||++ .+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa-~e~l 373 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSA-QDIL 373 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCH-HHHh
Confidence 000000011111 1124568899999999999999999 5554
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=274.02 Aligned_cols=219 Identities=22% Similarity=0.318 Sum_probs=176.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|+..+.||.|+||.||.+... +..|++|.+.... ......+.+|+.+|++++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999988877664 5789999987543 233457889999999999999999999984 457899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.... ...+++..+..++.+++.||.|||+ .+++||||+|+||+++.++.+||+|||+..
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999986432 3568999999999999999999999 789999999999999999999999997432
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccCCCCCCCChhhHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~--~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
+..++.++|||||||++|+|++|..||.......... ..+.+ . ..+...+..
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~ 228 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY----T----PVVSVYSSE 228 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC----C----CCccccCHH
Confidence 1235678999999999999999999997654332221 11111 1 112334577
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+++.+||..+|.+||++ .+++.
T Consensus 229 ~~~~i~~~l~~~p~~R~s~-~~ll~ 252 (256)
T cd08221 229 LISLVHSLLQQDPEKRPTA-DEVLD 252 (256)
T ss_pred HHHHHHHHcccCcccCCCH-HHHhh
Confidence 9999999999999999999 66654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=281.55 Aligned_cols=224 Identities=24% Similarity=0.282 Sum_probs=178.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+|...+.||+|+||.||+|... +..||||.+...... ....+..|++++..++||||+++++.+. +..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6888899999999999999886 588999999865433 3456889999999999999999999884 45789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+.+++|.+++... ....+++.....++.|++.||.|||+ .+++||||||+|||++.++.++|+|||+..
T Consensus 82 ~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 82 YCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999998532 33568999999999999999999999 799999999999999999999999998532
Q ss_pred ------------------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH
Q 003033 676 ------------------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE 707 (855)
Q Consensus 676 ------------------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~ 707 (855)
+..++.++|||||||++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 12245689999999999999999999976554
Q ss_pred HHHHHhhcccccccCCCCCCCChh--hHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 708 VQYALDTGKLKNLLDPLAGDWPFV--QAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 708 ~~~~~~~~~~~~~~d~~~~~~p~~--~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
........ .. ...++.. .+..+.+++.+||..||.+||+....+-++|.
T Consensus 238 ~~~~~~~~------~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DETFSNIL------KK-EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHHHHh------cC-CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 33221111 10 0112221 46789999999999999999995433333333
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=290.66 Aligned_cols=223 Identities=20% Similarity=0.321 Sum_probs=170.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--------C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--------E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~ 594 (855)
.++|.....||.|+||.||+|... +..||||.+..... .....+.+|+.+|++++||||+++++++. .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 457888999999999999999875 47899999875422 23456789999999999999999998763 2
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..+++++++ +++|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccc
Confidence 368999988 7899888742 358999999999999999999999 89999999999999999999999999743
Q ss_pred c-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc-----------
Q 003033 675 A-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK----------- 716 (855)
Q Consensus 675 ~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~----------- 716 (855)
. ...++.++|||||||++|+|++|++||............ +.
T Consensus 166 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 166 RQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS 245 (343)
T ss_pred eecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence 1 134677899999999999999999999754432211110 00
Q ss_pred --cccccCCCCCCCCh--------hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 --LKNLLDPLAGDWPF--------VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 --~~~~~d~~~~~~p~--------~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+... ...+. .....+.+|+.+||..||.+||++ .+++
T Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~-~ell 296 (343)
T cd07878 246 EHARKYIQSL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISA-SEAL 296 (343)
T ss_pred hhHHHHhhcc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCH-HHHh
Confidence 00000000 00110 123457899999999999999998 5664
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=284.35 Aligned_cols=166 Identities=25% Similarity=0.417 Sum_probs=136.8
Q ss_pred cceeeccCceEEEEEEEC----CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEEEecC
Q 003033 533 SLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYEYLP 604 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~Ey~~ 604 (855)
..+||+|+||.||+|... +..||+|.+.... ....+.+|+.+|++++||||+++++++. ...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357999999999999864 3679999987542 2346789999999999999999999872 34789999995
Q ss_pred CCCHHHHhccc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee----CCCCcEEEeecccc
Q 003033 605 NGSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFEFL 674 (855)
Q Consensus 605 ~GsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~~KL~DFg~~ 674 (855)
++|.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+.
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5888876421 112358999999999999999999999 899999999999999 45689999999743
Q ss_pred c-----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 003033 675 A-----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGI 704 (855)
Q Consensus 675 ~-----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~ 704 (855)
. ...++.++|||||||++|+|++|++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 1 12356789999999999999999999963
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=273.58 Aligned_cols=226 Identities=24% Similarity=0.324 Sum_probs=177.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
++|+..+.||.|+||.||+|... +..+|+|++..... .....+.+|+.+|+.++||||+++++.+ .+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999874 57899999875432 2456789999999999999999999987 4468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++++|.+++........+++.....++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999998644333468999999999999999999998 899999999999999999999999997310
Q ss_pred ----------------------cC-CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC-Chh
Q 003033 676 ----------------------SG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW-PFV 731 (855)
Q Consensus 676 ----------------------~~-~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~-p~~ 731 (855)
.. .++.++|||||||++|+|++|+.||.............. .......... ...
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 235 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ--NDPPSLETGADYKK 235 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc--CCCCCcCCcccccc
Confidence 11 356789999999999999999999975544322211111 1000011100 123
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+..+.+++.+||..||.+||++ .+++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~-~~ll 262 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTA-EELL 262 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 45789999999999999999998 6664
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=282.55 Aligned_cols=165 Identities=25% Similarity=0.420 Sum_probs=136.3
Q ss_pred ceeeccCceEEEEEEECC----eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~Ey~~~ 605 (855)
.+||+|+||.||+|.... ..||+|.+.... ....+.+|+.+|++++||||++++++|. ...++||||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 579999999999998652 679999987543 2346789999999999999999999872 35789999986
Q ss_pred CCHHHHhccc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee----CCCCcEEEeeccccc
Q 003033 606 GSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFEFLA 675 (855)
Q Consensus 606 GsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~~KL~DFg~~~ 675 (855)
++|.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 5777776321 122358899999999999999999999 799999999999999 567899999997431
Q ss_pred -----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 003033 676 -----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGI 704 (855)
Q Consensus 676 -----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~ 704 (855)
...++.++|||||||++|||+||++||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 12357789999999999999999999964
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=277.67 Aligned_cols=225 Identities=26% Similarity=0.401 Sum_probs=181.5
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~ 600 (855)
..+++|+....||.|+||.||+|.+. +..|++|++..... ....+.+|++++..++||||+++++++ .+..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45667888899999999999999987 68899999986543 456788999999999999999999987 45688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
||+++++|.+++.... ..+++..+..++.+++.||.|||. .+|+|+||+|+||+++.++.+||+|||+.
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999996432 369999999999999999999999 89999999999999999999999999732
Q ss_pred -------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 675 -------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 -------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
....++.++|||||||++|+|++|++||.............. ....+. ..+...+..
T Consensus 170 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~ 245 (286)
T cd06614 170 KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--KGIPPL--KNPEKWSPE 245 (286)
T ss_pred hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCCC--cchhhCCHH
Confidence 123457789999999999999999999976554332222111 001111 111123467
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+++.+||+.+|.+||++ .+++.
T Consensus 246 l~~li~~~l~~~p~~Rpt~-~~il~ 269 (286)
T cd06614 246 FKDFLNKCLVKDPEKRPSA-EELLQ 269 (286)
T ss_pred HHHHHHHHhccChhhCcCH-HHHhh
Confidence 9999999999999999999 66643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=278.70 Aligned_cols=225 Identities=25% Similarity=0.336 Sum_probs=172.6
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|+....||.|+||.||+|... +..||||.+...... ....+.+|++++++++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 578999998754322 2356889999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+. ++|..++... ....+++..+..++.+++.||.|||. ++++||||+|+||+++.++.+||+|||+..
T Consensus 81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 6898888543 23468999999999999999999998 799999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc------------------
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK------------------ 718 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~------------------ 718 (855)
...++.++|||||||++|+|+||++||................
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 0124667999999999999999999997654433221110000
Q ss_pred ----cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 ----NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ----~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.........+....+..+.+++.+||..||.+||++ .+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~~l 279 (284)
T cd07860 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA-KAAL 279 (284)
T ss_pred hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH-HHHh
Confidence 000000000011234568899999999999999999 5654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=283.69 Aligned_cols=220 Identities=23% Similarity=0.334 Sum_probs=174.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
.|.....||+|+||.||++... +..||||.+..........+.+|+.+++.++||||+++++.+ .+..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 3444567999999999999874 578999998765444456788999999999999999999987 456889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+++|.+++.. ..+++.....++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 103 ~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 103 GGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC
Confidence 9999998842 348899999999999999999999 799999999999999999999999998432
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|||++|+.||............ .....+.. ......+..+.++
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l 251 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI---RDNLPPRV-KDSHKVSSVLRGF 251 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhcCCCcc-ccccccCHHHHHH
Confidence 124578899999999999999999999755443221111 11111111 1112345678999
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 003033 740 AMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+||..||.+||++ +++++
T Consensus 252 i~~~l~~~P~~Rpt~-~~il~ 271 (292)
T cd06658 252 LDLMLVREPSQRATA-QELLQ 271 (292)
T ss_pred HHHHccCChhHCcCH-HHHhh
Confidence 999999999999999 66643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=275.62 Aligned_cols=223 Identities=25% Similarity=0.405 Sum_probs=173.6
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--C--------hhhHHHHHHHHHhcCCCcceeEeceec--C
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--G--------PSEFQQEIDILSKIRHPNLVTLVGACP--E 594 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~--------~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~ 594 (855)
+|...+.||.|+||.||+|... +..||||.++..... . .+.+.+|+.+++.++||||+++++++. +
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4666788999999999999764 678999988642111 1 235788999999999999999999984 4
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++++||||+|+||+++.++.+||+|||+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 688999999999999998532 468999999999999999999999 79999999999999999999999999743
Q ss_pred c---------------------------cC--CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 675 A---------------------------SG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 675 ~---------------------------~~--~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
. .. .++.++||||||+++|+|++|.+||................ ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~ 234 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR-SAPPIP 234 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc-cCCcCC
Confidence 1 01 25678999999999999999999997554433322211110 000111
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.......+..+.+++.+||..+|.+||++ ++|+
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~il 267 (272)
T cd06629 235 PDVSMNLSPVALDFLNACFTINPDNRPTA-RELL 267 (272)
T ss_pred ccccccCCHHHHHHHHHHhcCChhhCCCH-HHHh
Confidence 11112345789999999999999999998 6664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=275.21 Aligned_cols=227 Identities=22% Similarity=0.407 Sum_probs=175.4
Q ss_pred CccccceeeccCceEEEEEEECC---eEEEEEEecCCCCC----------ChhhHHHHHHHHHh-cCCCcceeEeceec-
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHSLQ----------GPSEFQQEIDILSK-IRHPNLVTLVGACP- 593 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~~~~~~----------~~~~f~~Ei~iL~~-l~HpnIV~l~g~~~- 593 (855)
+|+....||+|+||.||+|.... ..+|+|.+...... ....+.+|+.++.+ ++||||++++++|.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999998864 67999988643211 12457789998875 79999999999884
Q ss_pred -CceEEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
+..++||||+++++|.+++... .....+++..+..++.+++.||.|||.. .+|+|+||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 4688999999999999987431 2335689999999999999999999952 47999999999999999999999999
Q ss_pred cccc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 003033 672 EFLA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 672 g~~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~ 727 (855)
|... .+.++.++||||||+++|+|++|++||............. .....+...
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~- 235 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV--EAVYEPLPE- 235 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh--hccCCcCCc-
Confidence 7431 2345778999999999999999999996554332211111 011111111
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
...+..+.+++.+||..||.+||++ .++..+++
T Consensus 236 --~~~~~~l~~li~~cl~~~p~~Rp~~-~e~~~~~~ 268 (269)
T cd08528 236 --GMYSEDVTDVITSCLTPDAEARPDI-IQVSAMIS 268 (269)
T ss_pred --ccCCHHHHHHHHHHCCCCCccCCCH-HHHHHHhc
Confidence 1234679999999999999999999 77877664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=277.36 Aligned_cols=226 Identities=27% Similarity=0.379 Sum_probs=174.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
+|+..++||.|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|. +..+|||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788899999999999999985 678999999765432 3456788999999999999999999984 4689999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
+ |+|.+++........+++..+..++.||+.||.|||+ ++|+||||||+||+++.++.+||+|||+..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 7 4888888654444569999999999999999999998 799999999999999999999999997431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------cccc--cCCCCC
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKNL--LDPLAG 726 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~---------~~~~--~d~~~~ 726 (855)
...++.++|||||||++|+|++|++||.............. +..+ ......
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 12346789999999999999999999975543321111000 0000 000000
Q ss_pred C-----------CChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 727 D-----------WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 727 ~-----------~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. +....+..+.+++.+||+.||.+||++ .+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-~~~l 279 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISA-HDAL 279 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCH-HHHh
Confidence 1 111234678899999999999999999 5554
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=277.78 Aligned_cols=224 Identities=25% Similarity=0.361 Sum_probs=173.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|...+.||.|+||.||+|... +..||||++..... .....+.+|+.++++++||||+++++++. ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4777889999999999999875 58899999976542 23467899999999999999999999884 467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+ +++|.+++... ..++++..+..++.||+.||.|||+ ++|+|+||||+||+++.++.++|+|||+..
T Consensus 81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 99999998533 2569999999999999999999999 799999999999999999999999997321
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-ccc-----------------
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-GKL----------------- 717 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-~~~----------------- 717 (855)
...++.++|||||||++|+|+||.+||............ ..+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 122467899999999999999999988655432211000 000
Q ss_pred ccccCCCCC-----CCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 KNLLDPLAG-----DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ~~~~d~~~~-----~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+..+... .+.......+.+|+.+||..+|.+||++ ++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~l 280 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSA-AEAL 280 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCH-HHHh
Confidence 000000000 0011234789999999999999999999 5654
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=275.55 Aligned_cols=217 Identities=24% Similarity=0.377 Sum_probs=174.1
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-CCChhhHHHHHHHHHhcC---CCcceeEeceec--CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIR---HPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~---HpnIV~l~g~~~--~~~~LV~ 600 (855)
.|+..+.||.|+||.||+|... +..||||.+.... ......+.+|+.++++++ |||+++++++|. ...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777889999999999999874 5789999987643 233567889999999997 999999999884 3578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++++|.+++.. ..+++.....++.+++.||.|||. .+|+|+||+|+||+++.++.++|+|||+..
T Consensus 82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 99999999998842 268999999999999999999999 799999999999999999999999997321
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh-hhH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF-VQA 733 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~-~~~ 733 (855)
+..++.++|||||||++|+|++|.+||............. ... ...++. ..+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~---~~~---~~~~~~~~~~ 228 (277)
T cd06917 155 SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP---KSK---PPRLEDNGYS 228 (277)
T ss_pred ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---cCC---CCCCCcccCC
Confidence 1224678999999999999999999997654433221111 111 111221 145
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.+++.+||..||.+||++ .+++
T Consensus 229 ~~~~~~i~~~l~~~p~~R~~~-~~il 253 (277)
T cd06917 229 KLLREFVAACLDEEPKERLSA-EELL 253 (277)
T ss_pred HHHHHHHHHHcCCCcccCcCH-HHHh
Confidence 679999999999999999999 5664
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=278.46 Aligned_cols=225 Identities=26% Similarity=0.338 Sum_probs=172.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcC-CCcceeEeceec--Cc-----
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EV----- 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~----- 595 (855)
++|+..+.||+|+||.||+|... +..||||.+..... .....+.+|+.++..++ ||||+++++++. +.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888899999999999999876 57899999875432 22457889999999995 699999999873 22
Q ss_pred eEEEEEecCCCCHHHHhcccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeecc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFE 672 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg 672 (855)
.++||||+++ +|.+++..... ...+++..+..++.||+.||.|||. ++|+||||||+|||++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 6899999985 88888753321 3468999999999999999999999 89999999999999998 8999999998
Q ss_pred ccc--------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC-
Q 003033 673 FLA--------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA- 725 (855)
Q Consensus 673 ~~~--------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~- 725 (855)
+.. ...++.++|||||||++|+|++|.+||............... +..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~ 234 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKL--LGTPTEQ 234 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH--hCCCChh
Confidence 421 123577899999999999999999999765544332211000 000000
Q ss_pred --------------CCC--------ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 --------------GDW--------PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 --------------~~~--------p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+ ....+..+.+|+.+||..||.+||++ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~-~eil 289 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISA-KAAL 289 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCH-HHHh
Confidence 000 01245678999999999999999999 5554
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=271.79 Aligned_cols=221 Identities=22% Similarity=0.348 Sum_probs=176.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|+..++||+|+||.||++... +..||+|.+..... .....+.+|+.++++++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778899999999999998875 57899999875422 23457899999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++++|.+++... ....+++.....++.|++.||.|||+ ++++|+||+|+|||++.++.++|+|||+..
T Consensus 81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 9999999988532 22357899999999999999999999 799999999999999999999999997431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
+..++.++|||||||++|+|++|+.||............ ... .....+...+..+.
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~ 230 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI--IRG----SYPPVSSHYSYDLR 230 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH--hcC----CCCCCcccCCHHHH
Confidence 234567899999999999999999999654432221111 111 11112334457899
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+++.+||+.+|.+||++ .+|+.
T Consensus 231 ~li~~~l~~~p~~Rp~~-~~vl~ 252 (256)
T cd08218 231 NLVSQLFKRNPRDRPSV-NSILE 252 (256)
T ss_pred HHHHHHhhCChhhCcCH-HHHhh
Confidence 99999999999999999 66653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=276.84 Aligned_cols=227 Identities=28% Similarity=0.420 Sum_probs=172.4
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++.+|...+.||+|+||.||+|... +..||||.+....... ...+.+|+.+|+.++|+||+++++++. +..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 5678999999999999999999875 6789999987653322 346789999999999999999999884 3578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 83 e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9995 677776642 22457888889999999999999999 799999999999999999999999998431
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-----c-----------ccc
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-----G-----------KLK 718 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-----~-----------~~~ 718 (855)
...++.++|||||||++|+|+||.+||.........+.. + .+.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 113566899999999999999999999755432221111 0 000
Q ss_pred cccCCC-----C----CCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 NLLDPL-----A----GDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ~~~d~~-----~----~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...... . ..|. ......+.+++.+|+..||.+||++ ++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~-~~~l 286 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISA-QDAL 286 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCH-HHHh
Confidence 000000 0 0000 0124578899999999999999999 5553
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=288.09 Aligned_cols=222 Identities=28% Similarity=0.433 Sum_probs=185.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcC-CCcceeEeceec--CceE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIR-HPNLVTLVGACP--EVWT 597 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~ 597 (855)
....|+..+.||.|.||.||++..+ +..+|+|++.+..... ...+.+|+.||+++. |||||.++++|. ...+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456888899999999999999876 5789999998765543 357899999999998 999999999995 4678
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC----CCcEEEeeccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDFEF 673 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~----~~~~KL~DFg~ 673 (855)
||||+|.||.|.+.+... .++......++.||+.++.|||+ .||+||||||+|+|+.. ++.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999654 28999999999999999999999 89999999999999953 35799999973
Q ss_pred ------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCC
Q 003033 674 ------------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGD 727 (855)
Q Consensus 674 ------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~ 727 (855)
+....|+..+||||+||++|.|++|.+||....+.... +..+.+ +...+.
T Consensus 186 a~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~----~f~~~~ 261 (382)
T KOG0032|consen 186 AKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF----DFTSEP 261 (382)
T ss_pred ceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC----CCCCCC
Confidence 22356889999999999999999999999877754433 333333 334456
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
|+. .+..+.+++.+|+..||..|+++ .++++
T Consensus 262 w~~-is~~akd~i~~ll~~dp~~R~ta-~~~L~ 292 (382)
T KOG0032|consen 262 WDD-ISESAKDFIRKLLEFDPRKRLTA-AQALQ 292 (382)
T ss_pred ccc-cCHHHHHHHHHhcccCcccCCCH-HHHhc
Confidence 664 47889999999999999999999 55544
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=278.71 Aligned_cols=220 Identities=27% Similarity=0.366 Sum_probs=173.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
..|...+.||+|+||.||+|... +..||+|.+....... ...+.+|+.+++.++||||++++++|. +..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999875 6889999986543322 246889999999999999999999984 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||++ |+|.+++... ..++++..+..++.|++.||.|||+ .+|+||||+|.||+++.++.+||+|||+..
T Consensus 95 e~~~-g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVH--KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9996 6777776422 2468999999999999999999999 799999999999999999999999997321
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
.+.++.++|||||||++|+|+||++||..............- . .+. ..+...+..+
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~--~~~--~~~~~~~~~~ 243 (307)
T cd06607 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D--SPT--LSSNDWSDYF 243 (307)
T ss_pred CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-C--CCC--CCchhhCHHH
Confidence 234677899999999999999999999755443322211110 0 010 0112234679
Q ss_pred HHHHHHhhccCCCCCCChHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+|+.+||..+|.+||++ .+++
T Consensus 244 ~~li~~~l~~~p~~Rp~~-~~il 265 (307)
T cd06607 244 RNFVDSCLQKIPQDRPSS-EELL 265 (307)
T ss_pred HHHHHHHhcCChhhCcCH-HHHh
Confidence 999999999999999999 5664
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=276.49 Aligned_cols=222 Identities=25% Similarity=0.361 Sum_probs=169.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHH-HHhcCCCcceeEecee--cCceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDI-LSKIRHPNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~i-L~~l~HpnIV~l~g~~--~~~~~LV~E 601 (855)
++|+....||+|+||.||++... +..||||.++.... .....+..|+.+ ++.++||||+++++++ ....++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999886 68899999876532 233456677776 5566899999999998 346889999
Q ss_pred ecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeCCCCcEEEeeccccc----
Q 003033 602 YLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|++ |+|.+++... .....+++..+..++.||+.||.|||+ + +++||||||+|||++.++.+||+|||...
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 7888877432 233578999999999999999999998 5 89999999999999999999999997421
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC-h
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP-F 730 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p-~ 730 (855)
...++.++|+|||||++|+|++|+.||.........+.. .........| .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~ 231 (283)
T cd06617 157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-----VVEEPSPQLPAE 231 (283)
T ss_pred ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-----HHhcCCCCCCcc
Confidence 022467899999999999999999999632211111110 0011011111 1
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+..+.+++.+||..+|.+||++ ++++
T Consensus 232 ~~~~~l~~li~~~l~~~p~~Rp~~-~~il 259 (283)
T cd06617 232 KFSPEFQDFVNKCLKKNYKERPNY-PELL 259 (283)
T ss_pred ccCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 235679999999999999999999 6664
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=273.88 Aligned_cols=217 Identities=27% Similarity=0.395 Sum_probs=174.0
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
|...+.||.|+||.||+|... +..||||.+..... .....|.+|+.++.+++||||+++++++. +..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 667788999999999999874 57899999865432 22456889999999999999999999884 46889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++.. ..+++.....++.+++.||.|||+ .+++|+||||.||+++.++.++|+|||+..
T Consensus 86 ~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06641 86 GGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh
Confidence 9999998842 358999999999999999999999 899999999999999999999999997431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|+|++|.+||............. .......+...+..+.++
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 232 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP------KNNPPTLEGNYSKPLKEF 232 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh------cCCCCCCCcccCHHHHHH
Confidence 1334668999999999999999999997544322211110 001112233445779999
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 003033 740 AMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+||..+|.+||++ .+++.
T Consensus 233 i~~~l~~~p~~Rp~~-~~~l~ 252 (277)
T cd06641 233 VEACLNKEPSFRPTA-KELLK 252 (277)
T ss_pred HHHHccCChhhCcCH-HHHHh
Confidence 999999999999999 66654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=295.14 Aligned_cols=218 Identities=23% Similarity=0.387 Sum_probs=181.9
Q ss_pred CccccceeeccCceEEEEEEECCeE--EEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~--VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
.|.++..||.|+||.||++..+.+. .|-|++..........|.-||+||..+.||+||+|+++| .+.++|+.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 3566778999999999999877543 578998877777788999999999999999999999865 667889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----------- 673 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----------- 673 (855)
||-....+-. ...+|+..++..+++|++.||.|||+ ++|||||||..|||++-+|.++|+|||+
T Consensus 113 GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred CchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 9988877642 34579999999999999999999999 8999999999999999999999999973
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+...+|+.++|||||||+|.||..+.||....+.+.-.+...+- +|...-.|...+.
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS----ePPTLlqPS~Ws~ 263 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----EPPTLLQPSHWSR 263 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc----CCCcccCcchhhh
Confidence 22456899999999999999999999999877776655554332 2222223444567
Q ss_pred HHHHHHHHhhccCCCCCCChH
Q 003033 735 QLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
.|.+++.+||..||..||+.+
T Consensus 264 ~F~DfLk~cL~Knp~~Rp~aa 284 (1187)
T KOG0579|consen 264 SFSDFLKRCLVKNPRNRPPAA 284 (1187)
T ss_pred HHHHHHHHHHhcCCccCCCHH
Confidence 899999999999999999983
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=278.03 Aligned_cols=224 Identities=26% Similarity=0.337 Sum_probs=168.7
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|+..+.||.|+||.||+|... +..||+|.+...... ....+.+|+.++++++||||+++++++. ...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999885 678999998754322 2356788999999999999999999884 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++ ++|.+++... ...+++.....++.||+.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 96 5788877432 3468999999999999999999999 799999999999999999999999997321
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-----c--------ccccccC-
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-----G--------KLKNLLD- 722 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-----~--------~~~~~~d- 722 (855)
...++.++|||||||++|+|+||..||.........+.. + .+....+
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 122577899999999999999998775322211111100 0 0000000
Q ss_pred ----CCC--CCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 ----PLA--GDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ----~~~--~~~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... ..| ....+..+.+|+.+||..||.+|||+ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-~~il 279 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISA-EEAL 279 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCH-HHHh
Confidence 000 000 11235678999999999999999999 5654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=269.75 Aligned_cols=220 Identities=22% Similarity=0.353 Sum_probs=174.7
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
+|.....||+|+||.||++... +..+|||.+..... .....+.+|+.+|++++||||+++++.+ .+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999998775 57899999876532 2345788999999999999999999987 3468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccccc------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEFLA------ 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~~~------ 675 (855)
+++++|.+++.... ...+++..+..++.+++.||.|||+ ++|+|+||||+||+++.+ +.+||+|||+..
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999996432 3458999999999999999999999 799999999999999854 568999997431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|++|..||...+......... .. .....+...+..+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~l~ 230 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM--SG----TFAPISDRYSPDLR 230 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHH--hc----CCCCCCCCcCHHHH
Confidence 1335678999999999999999999997654332222111 11 11112333457799
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+++.+||..+|.+||++ .+++
T Consensus 231 ~li~~~l~~~p~~Rpt~-~~ll 251 (256)
T cd08220 231 QLILSMLNLDPSKRPQL-SQIM 251 (256)
T ss_pred HHHHHHccCChhhCCCH-HHHh
Confidence 99999999999999999 5654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=269.80 Aligned_cols=220 Identities=30% Similarity=0.440 Sum_probs=174.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|...+.||+|+||.||+|... +..||+|.++..... ....+..|+.++++++||||+++++.+. +..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4777889999999999999874 578999999866443 4567889999999999999999999873 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS------ 676 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~------ 676 (855)
+++++|.+++.. ...+++..+..|+.+++.||.|||+ .+|+|+||+|.||+++.++.+||+|||+...
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 999999999853 2357889999999999999999999 7999999999999999999999999973211
Q ss_pred -----------------------C---CCCcchhHHHHHHHHHHHHhCCCCCCCch-HHHHHHhhcccccccCCCCCCCC
Q 003033 677 -----------------------G---ELTPKSDVYSFGIILLRLLTGRPALGITK-EVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 677 -----------------------~---~~t~ksDVwSfGvvl~elltG~~pf~~~~-~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
. .++.++||||||+++|+|++|++||.... .......... ...+..+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~- 230 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIPDS- 230 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCCcc-
Confidence 1 15678999999999999999999996442 2222221111 111111111
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+++.+||..+|.+||++ .+++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~-~~i~ 259 (264)
T cd06626 231 LQLSPEGKDFLDRCLESDPKKRPTA-SELL 259 (264)
T ss_pred cccCHHHHHHHHHHccCCcccCCCH-HHHh
Confidence 1235678899999999999999999 5553
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=275.13 Aligned_cols=224 Identities=25% Similarity=0.339 Sum_probs=172.3
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
|+..+.||.|++|.||+|... +..||||++...... ....+.+|+++++.++||||+++++++. +..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566788999999999999875 688999998765322 2356889999999999999999999984 4678999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
+ ++|.+++.... ...+++..+..++.|++.||.|||+ ++++||||+|+|||++.++.+||+|||+..
T Consensus 81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 5 68999885332 1368999999999999999999999 799999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------------------
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK--------------------- 716 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~--------------------- 716 (855)
...++.++|||||||++|+|++|++||..............
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 11246689999999999999999999975544322111100
Q ss_pred -cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 -LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 -~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.....+.........+..+.+++.+||+.+|.+||++ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~il 278 (283)
T cd07835 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA-KAAL 278 (283)
T ss_pred hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCH-HHHh
Confidence 00000000011112234678999999999999999999 6664
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=289.69 Aligned_cols=164 Identities=20% Similarity=0.308 Sum_probs=139.1
Q ss_pred CCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
.+|...+.||+|+||.||+|...+ ..||+|+.... .+..|+.+|++++||||++++++|. +..++||||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 468889999999999999999864 67999985432 3457999999999999999999884 4578999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
.|+|.+++.. ...++++..+..|+.||+.||.|||. ++||||||||+|||++.++.+||+|||...
T Consensus 140 -~~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 140 -SSDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred -CCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence 4688888853 33568999999999999999999999 799999999999999999999999997432
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCC-CCCC
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGR-PALG 703 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~-~pf~ 703 (855)
...++.++|||||||++|||+++. ++|.
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~ 258 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFE 258 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcccc
Confidence 234678899999999999999854 4443
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=265.69 Aligned_cols=221 Identities=29% Similarity=0.463 Sum_probs=178.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
+|...+.||.|+||.||++... +..+++|++..........+.+|+.++++++||||+.+++.+. ...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4677889999999999999986 6789999998765545678999999999999999999999883 46789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+++|.+++.... ..+++..+..++.+++.||.|||. ++++||||+|.||+++.++.++|+|||...
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 155 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN 155 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccccc
Confidence 999999985432 468999999999999999999999 799999999999999999999999997431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++||||||+++|+|++|++||.............. .......++...+..+.+++
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i 231 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT----NGPPGLRNPEKWSDEFKDFL 231 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cCCCCcCcccccCHHHHHHH
Confidence 12346789999999999999999999976533322222111 01111111222257799999
Q ss_pred HHhhccCCCCCCChHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl 759 (855)
.+||..||.+||++ .+++
T Consensus 232 ~~~l~~~p~~R~t~-~~~l 249 (253)
T cd05122 232 KKCLQKNPEKRPTA-EQLL 249 (253)
T ss_pred HHHccCChhhCCCH-HHHh
Confidence 99999999999999 6664
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=276.41 Aligned_cols=224 Identities=26% Similarity=0.371 Sum_probs=174.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|+..++||+|+||.||+|... +..||||.++... ......+.+|++++++++||||++++++|. +..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888899999999999999886 5789999987542 223467899999999999999999999983 468999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++++.|..++. ....+++..+..++.+|+.||.|||. ++|+||||+|+||+++.++.+||+|||+..
T Consensus 82 ~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99877766553 23458999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------cC-CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc------------------c
Q 003033 676 -------------------SG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------------L 717 (855)
Q Consensus 676 -------------------~~-~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~------------------~ 717 (855)
.. .++.++||||||+++|+|++|++||.............. +
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 12 566789999999999999999999976544322211100 0
Q ss_pred c--cccCCC-----CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 K--NLLDPL-----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ~--~~~d~~-----~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. ...... ...++...+..+.+|+.+||..+|.+||++ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~il 283 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTC-DELL 283 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccH-HHHh
Confidence 0 000000 011233346789999999999999999999 6654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=294.44 Aligned_cols=176 Identities=29% Similarity=0.411 Sum_probs=151.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-C-----CcceeEecee--cCceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-H-----PNLVTLVGAC--PEVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-H-----pnIV~l~g~~--~~~~~L 598 (855)
.|.+.+.||+|+||.|.+|... +..||||+++... ....+-..|+.+|..|+ | -|+|+++++| .++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 6888999999999999999887 4789999998543 23445567999999997 4 4899999987 678999
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC--CCcEEEeecc----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA--NFVSKLSDFE---- 672 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~~KL~DFg---- 672 (855)
|+|.+ ..+|.++|..+ ...+|+...+..|+.||+.||.+||. .+|||+||||+||||.. ...+||+|||
T Consensus 266 VfELL-~~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhh-hhhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999 56999999654 44569999999999999999999998 89999999999999954 3479999997
Q ss_pred ------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH
Q 003033 673 ------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY 710 (855)
Q Consensus 673 ------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~ 710 (855)
++.+.+|+.+.||||||||++||++|.|.|.+.+++++
T Consensus 341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQ 396 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQ 396 (586)
T ss_pred cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHH
Confidence 45678899999999999999999999999987766543
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=275.68 Aligned_cols=219 Identities=24% Similarity=0.351 Sum_probs=174.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
.|...+.||+|+||.||++... +..|++|.+..........+.+|+.+++.++||||+++++++ .+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3455578999999999999875 578999998755444456788999999999999999999987 457889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+++|.+++.. ..+++..+..++.+++.||.|||+ ++|+||||+|+||+++.++.++|+|||+..
T Consensus 100 ~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 100 GGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence 9999999853 358899999999999999999999 899999999999999999999999997421
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|+|++|++||............ .....+ ....+...+..+.++
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~l~~l 248 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI---RDNLPP-KLKNLHKVSPRLRSF 248 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH---HhcCCC-CCcccccCCHHHHHH
Confidence 234678899999999999999999999654433221111 111111 111122345789999
Q ss_pred HHHhhccCCCCCCChHHHHH
Q 003033 740 AMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+||..+|.+||++ .+++
T Consensus 249 i~~~l~~~p~~Rpt~-~~il 267 (285)
T cd06648 249 LDRMLVRDPAQRATA-AELL 267 (285)
T ss_pred HHHHcccChhhCcCH-HHHc
Confidence 999999999999999 5554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=276.51 Aligned_cols=225 Identities=26% Similarity=0.362 Sum_probs=173.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec----CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV 599 (855)
++|+..+.||.|+||.||+|... ++.||||.++..... ....+.+|+.++.+++||||+++++++. ...+||
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999986 578999999754322 2335778999999999999999999873 568999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||++ ++|.+++.... ..+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 59999885432 368999999999999999999999 799999999999999999999999997321
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc---------------ccc
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---------------KLK 718 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~---------------~~~ 718 (855)
...++.++|||||||++|+|++|.+||............. .+.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 1124678999999999999999999997544322111000 000
Q ss_pred --------cc-cCCCCCCCChh-hHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 --------NL-LDPLAGDWPFV-QAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 --------~~-~d~~~~~~p~~-~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.. .......++.. .+..+.+|+.+||..+|++||++ .+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~-~ell 288 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA-EDAL 288 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH-HHHh
Confidence 00 00011122222 36778999999999999999999 6664
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=290.83 Aligned_cols=204 Identities=25% Similarity=0.312 Sum_probs=162.1
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhc---CCCcceeEeceec--CceEEEEEecCC
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKI---RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
||+|+||.||+|... +..||||++...... ....+..|..++.++ +||||+.+++.+. +..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999875 588999998653221 223456677777766 6999999999884 468999999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 999998853 3458899999999999999999999 799999999999999999999999998431
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCCh-hhHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPF-VQAEQL 736 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~-~~~~~l 736 (855)
...++.++|||||||++|+|+||+.||......... +..+.. .+|. ..+..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------~~~~~~~~~~~ 225 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV---------RFPKNVLSDEG 225 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC---------CCCCccCCHHH
Confidence 123677899999999999999999999765433221 111111 1111 235678
Q ss_pred HHHHHHhhccCCCCCCCh
Q 003033 737 ANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~ 754 (855)
.+|+.+||..||.+||+.
T Consensus 226 ~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 226 RQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred HHHHHHHcCCCHHHCCCC
Confidence 999999999999999965
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=273.88 Aligned_cols=219 Identities=22% Similarity=0.399 Sum_probs=173.6
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
+|+....||+|+||.||+|... +..||+|++...... ....+.+|+.+|++++||||+++++++. +..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4777889999999999999864 578999998754321 1356889999999999999999999984 46789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeeccccc--
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFLA-- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~~-- 675 (855)
||||+++++|.+++.. ..++++.....++.||+.||.|||+ ++++||||||+||+++.++ .+||+|||+..
T Consensus 81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 9999999999999853 3468899999999999999999999 7999999999999998775 69999997431
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH---HHHHhhcccccccCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV---QYALDTGKLKNLLDPLA 725 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~---~~~~~~~~~~~~~d~~~ 725 (855)
...++.++|||||||++|+|++|.+||...... ........ ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~ 229 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-----ATTA 229 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-----cCCC
Confidence 134567899999999999999999999643221 11111100 0112
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...|...+..+.+++.+||..+|.+||++ .+++
T Consensus 230 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-~~ll 262 (268)
T cd06630 230 PSIPEHLSPGLRDVTLRCLELQPEDRPPS-RELL 262 (268)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCcCH-HHHh
Confidence 23444566789999999999999999999 5553
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=277.94 Aligned_cols=221 Identities=26% Similarity=0.390 Sum_probs=176.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
.++|...+.||.|+||.||+|... +..||+|.+..........+.+|+.++++++||||+++++.| .+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 357888999999999999999764 578999998765444556789999999999999999999988 4468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.. ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||+..
T Consensus 98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 999999999842 247899999999999999999999 899999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+.++.++|||||||++|+|++|++||................ ......+...+..+.
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~ 246 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG----TPELQNPEKLSAIFR 246 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC----CCCCCCccccCHHHH
Confidence 2345778999999999999999999997554332211111000 000011223456799
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+++.+||..+|.+||++ .+++
T Consensus 247 ~li~~~l~~~p~~Rp~~-~~il 267 (293)
T cd06647 247 DFLNRCLEMDVEKRGSA-KELL 267 (293)
T ss_pred HHHHHHccCChhhCcCH-HHHh
Confidence 99999999999999999 5554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=275.13 Aligned_cols=214 Identities=24% Similarity=0.281 Sum_probs=174.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+|...+.||.|+||.||+|... +..||+|.+..... .....+.+|+.++++++||||+++++.+. +..++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999886 68899999976432 23567889999999999999999999884 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++++|.+++... .++++..+..++.+|+.||.|||. ++|+|+||+|+||+++.++.++|+|||+..
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998532 468999999999999999999998 799999999999999999999999997432
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH--HHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++||||||+++|+|++|..||..... ....... ... .....|...+..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~ 228 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK--QET----ADVLYPATWSTE 228 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH--hcc----ccccCcccCcHH
Confidence 22357789999999999999999999975542 1111111 110 111233344578
Q ss_pred HHHHHHHhhccCCCCCCCh
Q 003033 736 LANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~ 754 (855)
+.+++.+||..||.+||++
T Consensus 229 ~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 229 AIDAINKLLERDPQKRLGD 247 (258)
T ss_pred HHHHHHHHccCChhHcCCc
Confidence 9999999999999999999
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=308.34 Aligned_cols=217 Identities=26% Similarity=0.289 Sum_probs=177.9
Q ss_pred cccCCccccceeeccCceEEEEEEECC--eEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceecC--ceE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWT 597 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~ 597 (855)
...++|.+++.||+|+||.|..++.++ +.||+|++++.. .....-|..|-+||..-+.++||.|+.+|++ ++|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 344689999999999999999998874 679999998732 2345678999999999999999999999965 689
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc----
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---- 673 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~---- 673 (855)
+|||||+||+|..+|.... ++|......++.+|..||.-||+ .|+|||||||+|||||..|++||+|||-
T Consensus 152 lVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred EEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhc
Confidence 9999999999999996433 68888899999999999999999 8999999999999999999999999971
Q ss_pred -----------------c---------cc-CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 003033 674 -----------------L---------AS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 726 (855)
Q Consensus 674 -----------------~---------~~-~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~ 726 (855)
+ .+ +.|++.+|+||+||++|||+.|..||....-+...-.+-.-... -
T Consensus 226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~-----l 300 (1317)
T KOG0612|consen 226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES-----L 300 (1317)
T ss_pred CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh-----c
Confidence 1 12 67999999999999999999999999866665543332221111 1
Q ss_pred CCC--hhhHHHHHHHHHHhhccCCCCCCC
Q 003033 727 DWP--FVQAEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 727 ~~p--~~~~~~l~~L~~~Cl~~dP~~RPs 753 (855)
.|| ...+++..+||.+.+. +|..|-.
T Consensus 301 ~FP~~~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 301 SFPDETDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred CCCcccccCHHHHHHHHHHhc-Chhhhcc
Confidence 234 3467889999988876 6777766
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=292.12 Aligned_cols=215 Identities=28% Similarity=0.411 Sum_probs=175.4
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCCh---hhHHHHHHHHHhcCCCcceeEecee--cCceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~---~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~E 601 (855)
-|..++.||.|+||.||.+++. ...||||.+.....+.. .++..||.+|.+|+|||+|.+.|+| ....+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4788889999999999999875 46799999987665553 4678999999999999999999998 335779999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-------- 673 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-------- 673 (855)
|| -||-.|+|... ..+|..-.+..|+.+.+.||.|||+ ++.||||||..||||.+.|.+||+|||.
T Consensus 107 YC-lGSAsDlleVh--kKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn 180 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN 180 (948)
T ss_pred HH-hccHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence 99 56888877432 3578888999999999999999999 7899999999999999999999999982
Q ss_pred ----------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 674 ----------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 674 ----------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...|.|+-++|||||||+..||.-.+||+-..+.+...+.+..-.... -..+.| +..|.
T Consensus 181 sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPt-Lqs~eW----S~~F~ 255 (948)
T KOG0577|consen 181 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT-LQSNEW----SDYFR 255 (948)
T ss_pred cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCC-CCCchh----HHHHH
Confidence 235789999999999999999999999986666554333321111000 012344 57899
Q ss_pred HHHHHhhccCCCCCCCh
Q 003033 738 NLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~ 754 (855)
+++..||..-|.+|||.
T Consensus 256 ~Fvd~CLqKipqeRpts 272 (948)
T KOG0577|consen 256 NFVDSCLQKIPQERPTS 272 (948)
T ss_pred HHHHHHHhhCcccCCcH
Confidence 99999999999999997
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=268.17 Aligned_cols=220 Identities=25% Similarity=0.402 Sum_probs=174.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|...+.||.|+||.||+|... +..||+|.+..... .....+.+|+.+++.++||||+++++.+. ...++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778889999999999999886 57899999876422 23457889999999999999999999884 357899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeeccccc------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFLA------ 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~~------ 675 (855)
+++++|.+++... ....+++..+..++.+++.||.|||+ .+|+|+||||+|||++.++ .+||+|||+..
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 9999999998543 23458999999999999999999999 7999999999999998875 56999997321
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|++|.+||............ ......+. +...+..+
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~ 230 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI--CQGYFAPI----SPNFSRDL 230 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH--hcccCCCC----CCCCCHHH
Confidence 234567899999999999999999999755433322211 11111111 22334679
Q ss_pred HHHHHHhhccCCCCCCChHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+++.+||..+|.+||++ .+++
T Consensus 231 ~~~i~~~l~~~p~~Rpt~-~~ll 252 (257)
T cd08225 231 RSLISQLFKVSPRDRPSI-TSIL 252 (257)
T ss_pred HHHHHHHhccChhhCcCH-HHHh
Confidence 999999999999999999 6664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-32 Score=278.98 Aligned_cols=215 Identities=26% Similarity=0.368 Sum_probs=179.7
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
-|+++.+||+|+||.||++.++ |..||||.+..+ .+.+++..||.||.++..|++|++||.+ ...++||||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4888899999999999999876 678999998764 3678899999999999999999999976 346889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
.|++.|.+.. ...+|+...+..|+...+.||.|||. ..-||||||..||||+.+|++||+|||++.
T Consensus 112 AGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 112 AGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred CCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 9999999854 44689999999999999999999999 568999999999999999999999998532
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
.-.|+.++|||||||+..||..|+|||...+.+...+-. ..-.|..-.-|...+.++.++
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI----PT~PPPTF~KPE~WS~~F~DF 262 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI----PTKPPPTFKKPEEWSSEFNDF 262 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec----cCCCCCCCCChHhhhhHHHHH
Confidence 234788999999999999999999999765554322111 001112223455667899999
Q ss_pred HHHhhccCCCCCCCh
Q 003033 740 AMRCCEMSRKSRPEL 754 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~ 754 (855)
+..||-.+|++|-++
T Consensus 263 i~~CLiK~PE~R~TA 277 (502)
T KOG0574|consen 263 IRSCLIKKPEERKTA 277 (502)
T ss_pred HHHHhcCCHHHHHHH
Confidence 999999999999887
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-30 Score=276.05 Aligned_cols=214 Identities=26% Similarity=0.346 Sum_probs=173.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|.....||+|+||.||++... +..||+|++..... .....+.+|+++|++++||||+++++++. +..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788899999999999999875 58899999875432 23456889999999999999999999884 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||+|.|||++.++.+||+|||+..
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999998533 468899999999999999999999 799999999999999999999999997432
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++||||||+++|+|++|++||.............. .....|...+..+.+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~ 227 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE-------GKVRFPSFFSPDAKD 227 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-------CCccCCccCCHHHHH
Confidence 23356789999999999999999999976553221111100 011223334578999
Q ss_pred HHHHhhccCCCCCCCh
Q 003033 739 LAMRCCEMSRKSRPEL 754 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~ 754 (855)
++.+||..||.+||+.
T Consensus 228 li~~~l~~~p~~R~~~ 243 (290)
T cd05580 228 LIRNLLQVDLTKRLGN 243 (290)
T ss_pred HHHHHccCCHHHccCc
Confidence 9999999999999954
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=269.89 Aligned_cols=222 Identities=22% Similarity=0.337 Sum_probs=178.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|+..+.||.|+||.||++... +..|+||++..... .....|.+|+.++.+++||||+++++++. +..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999886 67899999987543 33567999999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++++|.+++... .++++..+..++.|++.||.|||+. .+++||||+|+||+++.++.++|+|||+..
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999532 5689999999999999999999973 489999999999999999999999997322
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch--HHHHHHhhcccccccCCCCCCCChh-hHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGDWPFV-QAE 734 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~--~~~~~~~~~~~~~~~d~~~~~~p~~-~~~ 734 (855)
...++.++||||||+++|+|+||++||.... ........ +.......++.. .+.
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 230 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA-----ICDGPPPSLPAEEFSP 230 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH-----HhcCCCCCCCcccCCH
Confidence 2235668999999999999999999997653 11111111 111111223333 567
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+.+++.+||..+|.+||++ .++++
T Consensus 231 ~l~~li~~~l~~~p~~R~~~-~~ll~ 255 (264)
T cd06623 231 EFRDFISACLQKDPKKRPSA-AELLQ 255 (264)
T ss_pred HHHHHHHHHccCChhhCCCH-HHHHh
Confidence 89999999999999999999 66643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=271.64 Aligned_cols=222 Identities=23% Similarity=0.323 Sum_probs=168.5
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcC-CCcceeEeceec----CceEEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP----EVWTLVYE 601 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~----~~~~LV~E 601 (855)
|...++||+|+||.||+|... +..||+|.++..... ......+|+.++.++. ||||++++++|. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 556788999999999999875 578999998764222 2234567999999995 999999999883 45889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|++ |+|.+++... ...++|..+..++.|++.||.|||. .+|+||||||.||+++. +.+||+|||+..
T Consensus 81 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 5888877432 2468999999999999999999999 79999999999999999 999999997321
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc----ccc----ccC---CCC
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK----LKN----LLD---PLA 725 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~----~~~----~~d---~~~ 725 (855)
.+.++.++|||||||++|+|++|.+||...+.......... ... ... ...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 12356789999999999999999999976543221111000 000 000 000
Q ss_pred CCCC-----------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 GDWP-----------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 ~~~p-----------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+| ...+..+.+|+.+||..+|.+||++ ++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~-~~~l 277 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITA-KQAL 277 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCH-HHHh
Confidence 0111 1345789999999999999999999 6664
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=271.76 Aligned_cols=221 Identities=26% Similarity=0.370 Sum_probs=175.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
+|+..+.||.|+||.||++... +..||+|.+..... .....+.+|++++++++||||+++++.|. ...++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777889999999999999887 67899999876533 23457899999999999999999999883 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++++|.+++.... .+++......++.+++.||.|||+. .+++|+||||+||+++.++.+||+|||..
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 9999999985332 5688999999999999999999972 48999999999999999999999999742
Q ss_pred --------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCch----HHHHHHhhcccccccCCCCCCCChh-hHHH
Q 003033 675 --------------ASGELTPKSDVYSFGIILLRLLTGRPALGITK----EVQYALDTGKLKNLLDPLAGDWPFV-QAEQ 735 (855)
Q Consensus 675 --------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~----~~~~~~~~~~~~~~~d~~~~~~p~~-~~~~ 735 (855)
.+..++.++|||||||++|+|++|.+||.... .....+.. .........+.. .+..
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 232 (265)
T cd06605 158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY-----IVNEPPPRLPSGKFSPD 232 (265)
T ss_pred cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH-----HhcCCCCCCChhhcCHH
Confidence 22456778999999999999999999996542 11111111 111111112222 5577
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+++.+||..+|.+||++ .+++
T Consensus 233 ~~~li~~~l~~~p~~Rpt~-~~ll 255 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSY-KELL 255 (265)
T ss_pred HHHHHHHHcCCCchhCcCH-HHHh
Confidence 9999999999999999999 5554
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=277.71 Aligned_cols=223 Identities=23% Similarity=0.283 Sum_probs=170.7
Q ss_pred ccceeeccCceEEEEEEECCeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCC
Q 003033 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
+.+.+|.|+++.||++...+..||||++.... ......+.+|+.+++.++||||+++++++. +..+++|||+++|+
T Consensus 6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34456667777888887778999999997652 233467899999999999999999999884 46789999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------ 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------ 675 (855)
|.+++.... ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||...
T Consensus 86 l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 999986432 2358889999999999999999999 799999999999999999999999996320
Q ss_pred --------------------c--CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh--cccccccC---------
Q 003033 676 --------------------S--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLD--------- 722 (855)
Q Consensus 676 --------------------~--~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~--~~~~~~~d--------- 722 (855)
. ..++.++|||||||++|+|++|++||............ +.....++
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 0 23677899999999999999999999755443322211 11111000
Q ss_pred -----------C-----CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 -----------P-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 -----------~-----~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+ .....+......+.+|+.+||..||.+||++ ++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~ll 293 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA-SQLL 293 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCH-HHHh
Confidence 0 0011112335678999999999999999999 6664
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=263.39 Aligned_cols=219 Identities=26% Similarity=0.425 Sum_probs=177.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~ 600 (855)
+|...+.||+|+||.||+|... +..|++|++..... .....+.+|+.++++++||||+++++.+. ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677789999999999999987 68899999976543 33567899999999999999999999884 3578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++++|.+++... ..+++..+..++.+++.||.|||+ .+++|+||+|+||+++.++.+||+|||...
T Consensus 81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 999999999998533 378999999999999999999999 799999999999999999999999997321
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-HHHHHhhcccccccCCCCCCCChhh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++||||||+++|+|++|..||..... ......... .......|...
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 229 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-----SGEPPEIPEHL 229 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-----cCCCcCCCccc
Confidence 12256789999999999999999999976542 221111111 01112234444
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+.+++.+|++.+|.+||++ .+++
T Consensus 230 ~~~l~~~i~~~l~~~p~~Rp~~-~~ll 255 (260)
T cd06606 230 SEEAKDFLRKCLRRDPKKRPTA-DELL 255 (260)
T ss_pred CHHHHHHHHHhCcCChhhCCCH-HHHh
Confidence 6789999999999999999999 5554
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=276.18 Aligned_cols=226 Identities=27% Similarity=0.325 Sum_probs=173.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec----CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~L 598 (855)
.++|+..+.||+|+||.||+|... +..||+|.+....... ...+.+|+.++.+++||||+++++++. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457899999999999999999885 6789999987543222 335678999999999999999999873 34789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+. ++|.+++... ...+++..+..++.||+.||.|||+ .+++||||||+|||++.++.+||+|||+..
T Consensus 86 v~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 5888887532 2568999999999999999999999 799999999999999999999999997321
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc-----cc---cC--
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK-----NL---LD-- 722 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~-----~~---~d-- 722 (855)
...++.++|||||||++|+|++|++||................ .. ++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 1235678999999999999999999997655433221110000 00 00
Q ss_pred ----C-CCCCCC--------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 ----P-LAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ----~-~~~~~p--------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. .....+ ...+..+.+|+.+||..||.+||++ ++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-~~il 288 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATA-EEAL 288 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCH-HHHh
Confidence 0 000000 0125678899999999999999999 6664
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=319.80 Aligned_cols=228 Identities=30% Similarity=0.475 Sum_probs=178.9
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.|.....||+|+||.||+|... +..||||.+..... ....|+++|++++|||||+++|+|. +..++||||++
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~ 766 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIE 766 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCC
Confidence 4667788999999999999874 68899999864322 2245789999999999999999994 46789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe--ec-----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS--DF----------- 671 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~--DF----------- 671 (855)
+|+|.+++. .++|..+..|+.+|+.||.|||..+..+|+||||||+|||++.++..++. ++
T Consensus 767 ~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (968)
T PLN00113 767 GKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFI 840 (968)
T ss_pred CCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccc
Confidence 999999993 38999999999999999999996545799999999999999988877764 11
Q ss_pred -------cccccCCCCcchhHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHhhcccccccCCCC---CCCChhhH
Q 003033 672 -------EFLASGELTPKSDVYSFGIILLRLLTGRPALGIT--------KEVQYALDTGKLKNLLDPLA---GDWPFVQA 733 (855)
Q Consensus 672 -------g~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~--------~~~~~~~~~~~~~~~~d~~~---~~~p~~~~ 733 (855)
|++....++.++|||||||++|||+||++||... .++...........++++.. ...+....
T Consensus 841 t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (968)
T PLN00113 841 SSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEI 920 (968)
T ss_pred cccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHH
Confidence 2333456889999999999999999999998532 12222222222333444422 12334556
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.++.+++.+||+.||.+||++ .+|++.|+.+..
T Consensus 921 ~~~~~l~~~Cl~~~P~~RPt~-~evl~~L~~~~~ 953 (968)
T PLN00113 921 VEVMNLALHCTATDPTARPCA-NDVLKTLESASR 953 (968)
T ss_pred HHHHHHHHhhCcCCchhCcCH-HHHHHHHHHhhc
Confidence 678999999999999999999 889999998744
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=274.16 Aligned_cols=226 Identities=26% Similarity=0.364 Sum_probs=174.1
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
..++|+....||+|+||.||+|... +..||||.++.... .....+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 3467889999999999999999985 57899999976432 223567889999999999999999998732
Q ss_pred -----ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 595 -----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 595 -----~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
..+||+||+++ +|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeC
Confidence 47899999975 777776432 3468999999999999999999999 799999999999999999999999
Q ss_pred eccccc---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-----
Q 003033 670 DFEFLA---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL----- 717 (855)
Q Consensus 670 DFg~~~---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~----- 717 (855)
|||+.. ...++.++|||||||++|+|++|++||...............
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC 238 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 997432 112467899999999999999999999765543322111000
Q ss_pred ----ccc--------cCC-------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 ----KNL--------LDP-------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ----~~~--------~d~-------~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+ .++ ....+ ...+..+.+|+.+||..+|.+||++ .+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~-~~il 297 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTA-EEAL 297 (302)
T ss_pred hhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCH-HHHh
Confidence 000 000 00011 1235789999999999999999999 5554
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=291.84 Aligned_cols=221 Identities=19% Similarity=0.322 Sum_probs=167.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
..+|.+...||+|+||.||++... +..||||... ...+.+|+.+|++|+|||||++++++ .+..+|||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 447888899999999999999886 4779999643 23467899999999999999999987 4467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+ .|+|.+++... ...++|..++.|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 242 ~-~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 Y-RSDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 9 47898888532 3469999999999999999999999 799999999999999999999999998531
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCC-CCc---------hHHHHHHhhcccc--ccc--
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPAL-GIT---------KEVQYALDTGKLK--NLL-- 721 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf-~~~---------~~~~~~~~~~~~~--~~~-- 721 (855)
+..++.++|||||||+||||++|..|+ ... ......+...... ...
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 233677899999999999999987554 221 1111111111110 000
Q ss_pred -----------------CC--CCCCCCh--hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 722 -----------------DP--LAGDWPF--VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 722 -----------------d~--~~~~~p~--~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+ ....|.. .....+.+|+.+||..||.+||++ .++++
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa-~elL~ 454 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSA-AELLR 454 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCH-HHHhh
Confidence 00 0112221 123468899999999999999999 66643
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=276.36 Aligned_cols=173 Identities=25% Similarity=0.372 Sum_probs=144.0
Q ss_pred CccccceeeccCceEEEEEEEC----CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec----CceE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT 597 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~ 597 (855)
.|....+||+|+||.||+|... +..||||.+.... ......+.+|+.++.+++||||++++++|. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3777889999999999999874 4789999998743 233456789999999999999999999984 3588
Q ss_pred EEEEecCCCCHHHHhcccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC----CCcEEEeec
Q 003033 598 LVYEYLPNGSLEDRLSCKD--NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDF 671 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~----~~~~KL~DF 671 (855)
+||||+++ +|.+++.... ....++......|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999974 6776663221 22368899999999999999999999 79999999999999999 999999999
Q ss_pred cccc-----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Q 003033 672 EFLA-----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGIT 705 (855)
Q Consensus 672 g~~~-----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~ 705 (855)
|+.. ...++.++|||||||++|+|++|++||...
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 8422 123567899999999999999999999643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=270.58 Aligned_cols=221 Identities=27% Similarity=0.412 Sum_probs=171.8
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYE 601 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~E 601 (855)
|...+.||.|+||.||+|... +..||+|.+.... ......+.+|+.++++++||||+++++++. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999886 4789999998653 223456889999999999999999999984 45889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|++ ++|.+++... ...+++..+..++.+|+.||.|||. .+++|+||||+|||++.++.+||+|||+..
T Consensus 81 ~~~-~~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMD-HDLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ccc-ccHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 997 5898888532 2468999999999999999999999 799999999999999999999999997321
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC------
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW------ 728 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~------ 728 (855)
...++.++|||||||++|+|+||++||................. .+....|
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 232 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG--SPTDENWPGVSKL 232 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC--CCchhhccccccc
Confidence 12356789999999999999999999975543322111100000 0000000
Q ss_pred --------------------ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 --------------------PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 --------------------p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+..+.+++.+||..+|.+||++ .+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-~~~l 282 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA-DQAL 282 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 01125678999999999999999999 5654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=275.28 Aligned_cols=221 Identities=27% Similarity=0.350 Sum_probs=173.0
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.|...+.||+|+||.||+|... +..||+|.+....... ...+.+|+.++++++|||+++++++|. +..+||||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 4788889999999999999875 5789999987543322 346889999999999999999999984 45789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
|++ |+|.+++... ..+++|..+..++.+++.||.|||. ++|+||||+|+||+++.++.+||+|||+.
T Consensus 106 ~~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (317)
T cd06635 106 YCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179 (317)
T ss_pred CCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence 996 5787777432 3468999999999999999999999 79999999999999999999999999732
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
..+.++.++|||||||++|+|++|.+||............... ...+ .-+...+..+.
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~l~ 254 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPT---LQSNEWSDYFR 254 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc--cCCC---CCCccccHHHH
Confidence 1234677899999999999999999998654332221111000 0000 01112346789
Q ss_pred HHHHHhhccCCCCCCChHHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRV 761 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~ 761 (855)
+|+.+||..+|.+||++ .+++..
T Consensus 255 ~li~~~l~~~p~~Rpt~-~~il~~ 277 (317)
T cd06635 255 NFVDSCLQKIPQDRPTS-EELLKH 277 (317)
T ss_pred HHHHHHccCCcccCcCH-HHHHhC
Confidence 99999999999999999 666553
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=277.54 Aligned_cols=220 Identities=22% Similarity=0.256 Sum_probs=168.1
Q ss_pred eeecc--CceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCC
Q 003033 535 KIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 606 (855)
Q Consensus 535 ~LG~G--~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~G 606 (855)
.||.| +||.||++.+. ++.||||++...... ..+.+.+|+.+++.++||||++++++|. +..++||||+++|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999874 689999998764322 2356889999999999999999999984 4678999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------------ 674 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------------ 674 (855)
+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+|++||+..
T Consensus 85 ~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999886432 2358899999999999999999998 79999999999999999999999998410
Q ss_pred --------------------cc--CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc--------------
Q 003033 675 --------------------AS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK-------------- 718 (855)
Q Consensus 675 --------------------~~--~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~-------------- 718 (855)
.. ..++.++|||||||++|+|++|++||............-...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 00 235678999999999999999999997543322221110000
Q ss_pred -------------------------ccc-CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 -------------------------NLL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 -------------------------~~~-d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+. .......+......+.+|+.+||..||.+|||+ .+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta-~e~l 306 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSA-SSLL 306 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCH-HHHh
Confidence 000 000111122356789999999999999999999 6664
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=273.73 Aligned_cols=218 Identities=23% Similarity=0.328 Sum_probs=171.9
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~ 605 (855)
|....+||+|+||.||++... +..||||.+..........+.+|+.+++.++||||+++++.+ .+..++||||+++
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 334467999999999999875 578999998654444456788999999999999999999987 4578999999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
++|.+++.. ..+++.....++.|++.||.|||+ ++|+||||+|+||+++.++.++|+|||+..
T Consensus 102 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 999998742 358899999999999999999999 799999999999999999999999997421
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|.+||............. ....+... .....+..+.+++
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~l~~li 250 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR---DNLPPKLK-NLHKVSPSLKGFL 250 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hhCCcccC-CcccCCHHHHHHH
Confidence 2335778999999999999999999997654432211110 00111000 1112346788999
Q ss_pred HHhhccCCCCCCChHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl 759 (855)
.+||..+|.+||++ .+++
T Consensus 251 ~~~l~~~P~~R~~~-~~ll 268 (292)
T cd06657 251 DRLLVRDPAQRATA-AELL 268 (292)
T ss_pred HHHHhCCcccCcCH-HHHh
Confidence 99999999999999 5554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=267.86 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=172.1
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||.|+||.||++... +..|++|.+..... .....+.+|+.++.+++||||+++++.+. ...++||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 68899999976543 23457889999999999999999998874 457899999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS------------ 676 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~------------ 676 (855)
.+++... ..+++..+..++.||+.||.|||. .+++||||+|+||+++.++.+||+|||+...
T Consensus 81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 9998532 368999999999999999999999 7999999999999999999999999974321
Q ss_pred ---------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh--H
Q 003033 677 ---------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ--A 733 (855)
Q Consensus 677 ---------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~--~ 733 (855)
..++.++||||||+++|+|++|.+||.............. ....||... +
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 227 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN-------GKIEWPEDVEVS 227 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-------CCcCCCccccCC
Confidence 1245579999999999999999999975543322111110 011233333 6
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
..+.+++.+||+.+|.+||++ ..+.+.|+
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~-~~~~~~l~ 256 (265)
T cd05579 228 DEAIDLISKLLVPDPEKRLGA-KSIEEIKN 256 (265)
T ss_pred HHHHHHHHHHhcCCHhhcCCC-ccHHHHhc
Confidence 789999999999999999998 55655554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=266.97 Aligned_cols=218 Identities=24% Similarity=0.356 Sum_probs=174.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-----CCChhhHHHHHHHHHhcCCCcceeEeceecC----ce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-----LQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-----~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~ 596 (855)
.+|...+.||+|+||.||+|... +..||+|.+.... ......|.+|+.++++++||||+++++++.+ .+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999875 5789999875431 1123468899999999999999999998742 46
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++++|.+++.. ...+++.....++.+++.||.|||+ .+|+|+||||+||+++.++.++|+|||+..
T Consensus 82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 899999999999999853 2358889999999999999999998 799999999999999999999999998542
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++|++||............. ..+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~ 230 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-----TQPTKPML 230 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-----cCCCCCCC
Confidence 1224667999999999999999999997654433322211 11122334
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
|...+..+.+++.+||. +|..||+. .++
T Consensus 231 p~~~~~~~~~~i~~~l~-~~~~r~~~-~~~ 258 (264)
T cd06653 231 PDGVSDACRDFLKQIFV-EEKRRPTA-EFL 258 (264)
T ss_pred CcccCHHHHHHHHHHhc-CcccCccH-HHH
Confidence 55566889999999999 57999998 444
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=263.96 Aligned_cols=221 Identities=28% Similarity=0.454 Sum_probs=177.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC----Ch----hhHHHHHHHHHhc-CCCcceeEeceecC-
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ----GP----SEFQQEIDILSKI-RHPNLVTLVGACPE- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~----~~----~~f~~Ei~iL~~l-~HpnIV~l~g~~~~- 594 (855)
..+|...+.||.|..+.|-++..+ +...|+|++...... .. +.-.+|+.||+++ .||||+.|.+++..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 346777788999999999988765 578999998754321 12 2345799999999 59999999999954
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..++|+|.|+.|.|.|+|. ..-.+++....+|+.|+..|+.|||. ++||||||||+|||+|++.++||+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccce
Confidence 4679999999999999994 33468999999999999999999999 8999999999999999999999999974
Q ss_pred cc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhccccccc
Q 003033 674 LA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLL 721 (855)
Q Consensus 674 ~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~ 721 (855)
.. ...|+..+|+||+|||+|.|+.|.|||.....+- ..+..|++
T Consensus 170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky---- 245 (411)
T KOG0599|consen 170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY---- 245 (411)
T ss_pred eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc----
Confidence 31 2347778999999999999999999996544332 12223332
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.-..+.|. +.+....+|+.+||+.||.+|.|. ++++
T Consensus 246 qF~speWa-dis~~~KdLIsrlLqVdp~~Rita-ke~L 281 (411)
T KOG0599|consen 246 QFRSPEWA-DISATVKDLISRLLQVDPTKRITA-KEAL 281 (411)
T ss_pred ccCCcchh-hccccHHHHHHHHHeeCchhcccH-HHHh
Confidence 22344564 456779999999999999999998 5554
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=267.08 Aligned_cols=209 Identities=25% Similarity=0.320 Sum_probs=169.3
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||.|+||.||++... +..||+|++...... ....+.+|+.+++.++||||+++++.+. ...++||||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999987 688999999764322 3457899999999999999999999884 468899999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
.+++.. ...+++..+..++.+|+.||.|||+ ++++|+||+|.||+++.++.+||+|||+..
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~ 154 (262)
T cd05572 81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCG 154 (262)
T ss_pred HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccC
Confidence 999953 2458899999999999999999999 799999999999999999999999997422
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch--HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~--~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
...++.++|+||||+++|+|++|.+||.... .......... ......+|...+..+.+++.+
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~ 229 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK-----GNGKLEFPNYIDKAAKDLIKQ 229 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc-----cCCCCCCCcccCHHHHHHHHH
Confidence 1235678999999999999999999997655 2211111100 011223444446789999999
Q ss_pred hhccCCCCCCChH
Q 003033 743 CCEMSRKSRPELG 755 (855)
Q Consensus 743 Cl~~dP~~RPs~~ 755 (855)
||..+|.+||+++
T Consensus 230 ~l~~~p~~R~~~~ 242 (262)
T cd05572 230 LLRRNPEERLGNL 242 (262)
T ss_pred HccCChhhCcCCc
Confidence 9999999999953
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=271.88 Aligned_cols=210 Identities=24% Similarity=0.326 Sum_probs=167.0
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||+|+||.||++... +..||+|.+..... .....+..|+.+|++++||||+++++.+. +..|+||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999765 67899999875422 22445778999999999999999999873 468999999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
.+++.... ...+++..+..++.|++.||.|||. .+|+||||+|+|||++.++.+||+|||+..
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccC
Confidence 99985432 2468999999999999999999999 799999999999999999999999997431
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
++.++.++|||||||++|+|++|+.||...... ...+..... ......|...+..+.+++.+
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~ 231 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-----EMAVEYPDKFSPEAKDLCEA 231 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-----cccccCCccCCHHHHHHHHH
Confidence 234677899999999999999999999654321 111111111 11112333446789999999
Q ss_pred hhccCCCCCCCh
Q 003033 743 CCEMSRKSRPEL 754 (855)
Q Consensus 743 Cl~~dP~~RPs~ 754 (855)
||+.+|.+||++
T Consensus 232 ~l~~~p~~R~~~ 243 (277)
T cd05577 232 LLQKDPEKRLGC 243 (277)
T ss_pred HccCChhHccCC
Confidence 999999999965
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=262.56 Aligned_cols=218 Identities=28% Similarity=0.437 Sum_probs=177.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|.....||+|+||.||++... +..|++|.+..... .....+.+|++++.+++|||++++++++. ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777889999999999999875 57899999987654 23467899999999999999999999874 467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++++|.+++... ..+++..+..++.+++.||.|||+ .+|+||||||+||+++.++.+||+|||+..
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999998532 568999999999999999999998 799999999999999999999999997432
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++||||||+++|+|++|.+||.............. ......+...+..+.
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 228 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ------DDHPPLPEGISPELK 228 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc------cCCCCCCCCCCHHHH
Confidence 12346789999999999999999999975544332222111 111223344567899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+++.+||..+|++||++ .+++
T Consensus 229 ~~i~~~l~~~p~~R~~~-~~~l 249 (254)
T cd06627 229 DFLMQCFQKDPNLRPTA-KQLL 249 (254)
T ss_pred HHHHHHHhCChhhCcCH-HHHh
Confidence 99999999999999999 5554
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=271.75 Aligned_cols=226 Identities=23% Similarity=0.288 Sum_probs=170.0
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcC-CCcceeEecee--cCceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
+|.....||+|+||.||++... +..||||.+...... ....+.+|+.++.++. ||||++++|++ ....+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4566778999999999999876 578999998764332 3456889999999996 99999999987 3457899999
Q ss_pred cCCCCHHHHhcc--cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 603 LPNGSLEDRLSC--KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
+. ++|.++... ......+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 466554321 11235689999999999999999999972 389999999999999999999999997421
Q ss_pred -------------------c---CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 -------------------S---GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 -------------------~---~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
. ..++.++|||||||++|+|++|++||.........+... ............+...+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (288)
T cd06616 162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV-VKGDPPILSNSEEREFS 240 (288)
T ss_pred CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh-cCCCCCcCCCcCCCccC
Confidence 1 146778999999999999999999996543221111110 00000111111122356
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.+|+.+||..+|.+||++ ++|+
T Consensus 241 ~~l~~li~~~l~~~p~~Rpt~-~~i~ 265 (288)
T cd06616 241 PSFVNFINLCLIKDESKRPKY-KELL 265 (288)
T ss_pred HHHHHHHHHHccCChhhCcCH-HHHh
Confidence 789999999999999999999 6654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=270.00 Aligned_cols=226 Identities=24% Similarity=0.370 Sum_probs=170.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|+....||+|+||.||+|... +..||||.+..... .....+.+|+.++++++||||+++++++. +..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999875 57899999865432 22356889999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeeccccc-----
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLA----- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~----- 675 (855)
|++ ++|.+++... ....+++.....++.||+.||.|||+ ++|+||||+|+|||++. ++.+||+|||+..
T Consensus 82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 5888877432 22346788888999999999999999 79999999999999985 5679999997431
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-----ccccc-------C
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-----LKNLL-------D 722 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-----~~~~~-------d 722 (855)
...++.++|||||||++|+|+||++||.............. ..... +
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 12356789999999999999999999975543322211100 00000 0
Q ss_pred --CCCCCCC--------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 --PLAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 --~~~~~~p--------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.....|+ ...+..+.+++.+|++.+|.+||++ .+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~-~~~l 282 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA-RAAL 282 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCH-HHHh
Confidence 0000111 1234678999999999999999999 5554
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=272.06 Aligned_cols=215 Identities=25% Similarity=0.324 Sum_probs=169.5
Q ss_pred CccccceeeccCceEEEEEEE-----CCeEEEEEEecCCCC----CChhhHHHHHHHHHhc-CCCcceeEeceec--Cce
Q 003033 529 NFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL----QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW 596 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~~----~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~ 596 (855)
+|+..+.||.|+||.||++.. .+..||+|++..... ...+.+.+|+.+|.++ +||||+.+++.+. ...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477788999999999999876 457899999875422 2245688999999999 5999999998884 357
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
++||||+++|+|.+++... .++++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 8999999999999998532 458889999999999999999999 8999999999999999999999999974321
Q ss_pred ----------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCC
Q 003033 677 ----------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAG 726 (855)
Q Consensus 677 ----------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~ 726 (855)
..++.++|||||||++|+|++|.+||....... ..+.. .+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-----~~~~~~~ 229 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-----RILKSEP 229 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-----HhhccCC
Confidence 124568999999999999999999996432111 11111 0111112
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+|......+.+|+.+||..||.+||+.
T Consensus 230 ~~~~~~~~~~~~ll~~~l~~~p~~R~~~ 257 (290)
T cd05613 230 PYPQEMSALAKDIIQRLLMKDPKKRLGC 257 (290)
T ss_pred CCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 3444556789999999999999999854
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=269.49 Aligned_cols=208 Identities=25% Similarity=0.294 Sum_probs=159.9
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHh---cCCCcceeEeceec--CceEEEEEecC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSK---IRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~---l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.||+|+||.||++... +..||||.+....... ...+.+|..++.. .+||||+.+++++. +..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 5789999987643221 2334555544443 47999999998873 46889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++.. ...+++.....|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 154 (279)
T cd05633 81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 154 (279)
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccC
Confidence 9999998853 2469999999999999999999999 799999999999999999999999998431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|+|++|..||...... ...+..... ......|...+..+.++
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 229 (279)
T cd05633 155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TVNVELPDSFSPELKSL 229 (279)
T ss_pred cCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh-----cCCcCCccccCHHHHHH
Confidence 123577899999999999999999999643211 111111111 11112333456789999
Q ss_pred HHHhhccCCCCCCC
Q 003033 740 AMRCCEMSRKSRPE 753 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs 753 (855)
+.+||..||.+||+
T Consensus 230 i~~~l~~~p~~R~~ 243 (279)
T cd05633 230 LEGLLQRDVSKRLG 243 (279)
T ss_pred HHHHhcCCHHHhcC
Confidence 99999999999995
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=279.66 Aligned_cols=225 Identities=23% Similarity=0.320 Sum_probs=171.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceecC-------ce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------~~ 596 (855)
+++|...++||+|+||.||+|... +..||||.+..... .....+.+|+.++++++||||+++++++.. ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999875 57899999875322 234568889999999999999999987632 36
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+. ++|.+++. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~lv~e~~~-~~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceee
Confidence 89999996 58888773 2358999999999999999999999 799999999999999999999999997421
Q ss_pred ----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh---------cccc
Q 003033 676 ----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT---------GKLK 718 (855)
Q Consensus 676 ----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~---------~~~~ 718 (855)
...++.++|||||||++|+|++|++||...+........ ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 123567899999999999999999999654322111000 0000
Q ss_pred cccC------------CCCCCCC---hhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 719 NLLD------------PLAGDWP---FVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 719 ~~~d------------~~~~~~p---~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+.. .....++ ...+..+.+|+.+||+.+|.+||++ .+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-~e~l~ 291 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITV-EEALA 291 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCH-HHHhc
Confidence 0000 0000110 1234678999999999999999999 56643
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=285.87 Aligned_cols=222 Identities=26% Similarity=0.456 Sum_probs=184.6
Q ss_pred ccccceeeccCceEEEEEEEC------CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE 601 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~E 601 (855)
+...++||.|+||+||+|.+- ..+||||++.... .....+|+.|+-+|.+|+||||++|+|+|. ....||++
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq 777 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ 777 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence 344678999999999999874 2579999997653 334678999999999999999999999995 45779999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-------- 673 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-------- 673 (855)
|||.|+|.|+++. ...++.-+..+.|..|||+||.|||. +++|||||-..|||+..-.++||.|||+
T Consensus 778 ~mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred hcccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999964 33467788999999999999999998 8999999999999999999999999973
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHhhcccccccCCCCCCCChh
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLT-GRPALGITK--EVQYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~--~~~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
+....|+.++|||||||++||++| |..|+.+.. ++...++.|. +...|..
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge--------RLsqPpi 924 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE--------RLSQPPI 924 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc--------cCCCCCC
Confidence 234568899999999999999998 777876543 3333333332 2345777
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
++.++.-++.+||..|+..||++ +++...+.++
T Consensus 925 CtiDVy~~mvkCwmid~~~rp~f-kel~~~fs~~ 957 (1177)
T KOG1025|consen 925 CTIDVYMVMVKCWMIDADSRPTF-KELAEEFSRM 957 (1177)
T ss_pred ccHHHHHHHHHHhccCcccCccH-HHHHHHHHHH
Confidence 88899999999999999999999 7787777766
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=278.52 Aligned_cols=223 Identities=20% Similarity=0.283 Sum_probs=170.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--------C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~ 594 (855)
.++|...+.||+|+||.||+|... +..||||.+.... ......+.+|+.++++++||||++++++|. .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 467999999999999999999875 6789999986432 223456778999999999999999999873 1
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||+. |+|.+.+.. .+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||+.
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 3689999995 588887732 27888999999999999999999 79999999999999999999999999743
Q ss_pred c------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc----------
Q 003033 675 A------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK---------- 716 (855)
Q Consensus 675 ~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~---------- 716 (855)
. ...++.++|||||||++|+|++|+.||...+........ +.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQ 245 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 2 234677899999999999999999999654422110000 00
Q ss_pred -----------------cccccCC-----CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 -----------------LKNLLDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 -----------------~~~~~d~-----~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+...... .....+...+..+.+|+.+||..||.+||++ .+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~eiL 309 (353)
T cd07850 246 PTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISV-DDAL 309 (353)
T ss_pred hhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 0000000 0000011345678999999999999999999 6664
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=270.96 Aligned_cols=225 Identities=24% Similarity=0.375 Sum_probs=169.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC---------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE--------- 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--------- 594 (855)
++|....+||+|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 47899999999999999999875 578999998654322 23456789999999999999999998732
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..++||||+. ++|.+++... ...+++.....++.||+.||.|||+ ++|+|+||||+|||++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 3489999996 5888887432 2368999999999999999999999 7999999999999999999999999974
Q ss_pred cc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----ccccc
Q 003033 674 LA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GKLKN 719 (855)
Q Consensus 674 ~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~~~~ 719 (855)
.. ...++.++||||||+++|+|+||++||............ +.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 31 012466899999999999999999999755432211100 00000
Q ss_pred cc----------------CCC-----CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 LL----------------DPL-----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ~~----------------d~~-----~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+ ... ...++......+.+|+.+||..||.+||++ ++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~-~e~l 305 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDA-DTAL 305 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCH-HHHh
Confidence 00 000 000111224567899999999999999999 5654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=275.82 Aligned_cols=217 Identities=23% Similarity=0.371 Sum_probs=178.8
Q ss_pred CccccceeeccCceEEEEEE--ECCeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
-|+..+.||+|.|..|-.++ +.|..||||++.+..... ..++.+|+..|+-++|||||+||.+. +..+|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 47778889999999998875 468999999999876554 46788999999999999999999987 4579999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee-CCCCcEEEeeccccc------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-DANFVSKLSDFEFLA------ 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl-d~~~~~KL~DFg~~~------ 675 (855)
-.+|+|+|++... ...|.+....+++.||+.|+.|+|. ..+|||||||+||.+ ..-|-+||+|||+..
T Consensus 99 GD~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~ 173 (864)
T KOG4717|consen 99 GDGGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK 173 (864)
T ss_pred cCCchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcc
Confidence 9999999999643 3458889999999999999999999 459999999999976 556999999998532
Q ss_pred ------------------cCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 ------------------SGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 ------------------~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
+..| .+++||||||||||-|++|++||...+.-+. +.-++|.. ...|...+.+.
T Consensus 174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------LTmImDCK-YtvPshvS~eC 246 (864)
T KOG4717|consen 174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------LTMIMDCK-YTVPSHVSKEC 246 (864)
T ss_pred hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------hhhhhccc-ccCchhhhHHH
Confidence 2223 3579999999999999999999975554332 22333321 23577889999
Q ss_pred HHHHHHhhccCCCCCCChHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+|+..||..||++|-++ ++|
T Consensus 247 rdLI~sMLvRdPkkRAsl-EeI 267 (864)
T KOG4717|consen 247 RDLIQSMLVRDPKKRASL-EEI 267 (864)
T ss_pred HHHHHHHHhcCchhhccH-HHH
Confidence 999999999999999998 555
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=275.49 Aligned_cols=221 Identities=24% Similarity=0.350 Sum_probs=169.2
Q ss_pred Cccc-cceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--------------hhhHHHHHHHHHhcCCCcceeEece
Q 003033 529 NFDP-SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--------------PSEFQQEIDILSKIRHPNLVTLVGA 591 (855)
Q Consensus 529 ~f~~-~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--------------~~~f~~Ei~iL~~l~HpnIV~l~g~ 591 (855)
+|.. ...||.|+||.||+|... +..||||.+....... ...+.+|+.++..++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 4543 466999999999999875 5789999986543221 1247789999999999999999998
Q ss_pred e--cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 592 ~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
+ .+..++||||+. |+|.+++.. ...+++.....++.|++.||.|||. .+|+||||||+|||++.++.+||+
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEEC
Confidence 7 346889999996 689998843 3458899999999999999999999 799999999999999999999999
Q ss_pred ecccccc----------------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH
Q 003033 670 DFEFLAS----------------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 709 (855)
Q Consensus 670 DFg~~~~----------------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~ 709 (855)
|||.... ..++.++|||||||++|+|+||.+||.......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9974321 124678999999999999999999997655432
Q ss_pred HHHhhcccccccCCCCCCCC-----------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 710 YALDTGKLKNLLDPLAGDWP-----------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 710 ~~~~~~~~~~~~d~~~~~~p-----------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
........ ...+....|| ...+..+.+++.+||..+|.+||++ ++++
T Consensus 242 ~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-~~~l 311 (335)
T PTZ00024 242 QLGRIFEL--LGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA-KEAL 311 (335)
T ss_pred HHHHHHHH--hCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH-HHHh
Confidence 21110000 0000000010 1234678999999999999999999 6664
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=278.07 Aligned_cols=226 Identities=24% Similarity=0.304 Sum_probs=173.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceecC-------c
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------V 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------~ 595 (855)
.+.|.....||+|+||.||+|... +..||||.+.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457888999999999999999875 5789999987542 2234567889999999999999999998732 3
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.+|||||+. ++|.+++.. ...+++.....++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 689999995 789888842 3468999999999999999999999 799999999999999999999999998432
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh---------------
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--------------- 714 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~--------------- 714 (855)
...++.++|||||||++|+|++|++||...+........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 123567899999999999999999999654322111000
Q ss_pred --ccccccc-------CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 715 --GKLKNLL-------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 715 --~~~~~~~-------d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
......+ ++....+....+..+.+|+.+||+.+|.+||++ ++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~-~ell~ 290 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITV-EEALA 290 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCH-HHHHc
Confidence 0000000 000001112345778999999999999999999 66654
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=265.27 Aligned_cols=216 Identities=22% Similarity=0.266 Sum_probs=164.8
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHH-HhcCCCcceeEeceec--CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDIL-SKIRHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL-~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+.||.|+||.||+|... +..||||.+....... ...+..|..++ ...+||||+++++++. +..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999875 5789999987543221 22345565554 4458999999999984 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ..++++..+..++.|++.||.|||+ .+|+||||+|+|||++.++.+||+|||+..
T Consensus 82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (260)
T cd05611 82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVG 155 (260)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCC
Confidence 999999853 2468899999999999999999999 799999999999999999999999997432
Q ss_pred -----------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 676 -----------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 676 -----------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
...++.++||||||+++|+|+||.+||......... ...+.. . .....+...+..+.+++.+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~i~~ 230 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI----N-WPEEVKEFCSPEAVDLINR 230 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc----C-CCCcccccCCHHHHHHHHH
Confidence 133577899999999999999999999755432211 111111 0 0001112345789999999
Q ss_pred hhccCCCCCCChHHHHHHH
Q 003033 743 CCEMSRKSRPELGKDVWRV 761 (855)
Q Consensus 743 Cl~~dP~~RPs~~~evl~~ 761 (855)
||..+|.+||++ ..+.+.
T Consensus 231 ~l~~~p~~R~~~-~~~~~~ 248 (260)
T cd05611 231 LLCMDPAKRLGA-NGYQEI 248 (260)
T ss_pred HccCCHHHccCC-CcHHHH
Confidence 999999999987 434333
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=276.96 Aligned_cols=225 Identities=26% Similarity=0.384 Sum_probs=171.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhc-CCCcceeEeceecC----ceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKI-RHPNLVTLVGACPE----VWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~----~~~ 597 (855)
.++|...+.||+|+||.||+|... +..||||.+.... ......+.+|+.++.++ +||||++++++|.. ..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 457888899999999999999875 5789999886432 22345677899999999 99999999998732 478
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||++ ++|..++... .++|..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 9999997 5999888422 68899999999999999999999 799999999999999999999999997431
Q ss_pred -----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh---h-c-------
Q 003033 676 -----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD---T-G------- 715 (855)
Q Consensus 676 -----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~---~-~------- 715 (855)
...++.++|||||||++|+|+||++||........... . +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 12245679999999999999999999965432221100 0 0
Q ss_pred ------ccccccC----C---CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 716 ------KLKNLLD----P---LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 716 ------~~~~~~d----~---~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
....+++ . .........+..+.+++.+||+.||.+||++ .+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~-~~il~ 294 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA-EEALE 294 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH-HHHhh
Confidence 0000000 0 0001111245789999999999999999999 56654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=270.44 Aligned_cols=224 Identities=22% Similarity=0.320 Sum_probs=170.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcC-CCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV~ 600 (855)
.++|.....||.|+||.||+|.+. +..||||.++..... ....+..|+.++.++. ||||++++++|. ...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 356888899999999999999987 788999999764322 3445777888777775 999999999984 3688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS---- 676 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~---- 676 (855)
||++ ++|.+++... ..++++..+..++.+|+.||.|||+. .+|+||||+|+|||++.++.+||+|||+...
T Consensus 94 e~~~-~~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9985 5777776432 23789999999999999999999972 4899999999999999999999999974310
Q ss_pred ------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 003033 677 ------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 677 ------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
+.++.++|||||||++|+|++|++||.........+.. .+.... + ...+....
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~ 245 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK-ILQEEP-P-SLPPNEGF 245 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH-HhcCCC-C-CCCCCCCC
Confidence 12567899999999999999999999653221111111 000000 0 01111234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+.+|+.+||..||.+||++ ++++
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~-~~il 271 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKY-RELL 271 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCH-HHHh
Confidence 5789999999999999999999 6664
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=278.27 Aligned_cols=224 Identities=20% Similarity=0.331 Sum_probs=172.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec------CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP------EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~~~~ 597 (855)
.+|+..+.||.|+||.||+|... +..||+|.+..... .....+.+|+.+|.+++||||+++++++. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 57888899999999999999875 68899999876432 23456788999999999999999998763 2478
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+. |+|.+++.. ...+++.....++.||+.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 85 lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 85 VVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 9999995 689988843 3458999999999999999999999 799999999999999999999999997421
Q ss_pred ----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH---h-hc--------
Q 003033 676 ----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL---D-TG-------- 715 (855)
Q Consensus 676 ----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~---~-~~-------- 715 (855)
...++.++|||||||++|+|++|++||.......... . .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 1235678999999999999999999996543321110 0 00
Q ss_pred -----ccccccC----CCCCCCC---hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 716 -----KLKNLLD----PLAGDWP---FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 716 -----~~~~~~d----~~~~~~p---~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+..... .....|. ...+..+.+++.+||+.+|.+||++ .+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~~l 292 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV-EQAL 292 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCH-HHHH
Confidence 0000000 0011111 1245789999999999999999999 5543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=266.34 Aligned_cols=223 Identities=26% Similarity=0.358 Sum_probs=172.4
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
|.....||.|+||.||+|... +..+++|.+...... ....+.+|+.+|++++||||+++++++. +..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456778999999999999875 678999998765332 3467889999999999999999999873 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++ +|.+++... ...+++..+..++.+++.||.|||. ++|+|+||||+|||++.++.+||+|||+..
T Consensus 81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 74 888888543 2468999999999999999999999 799999999999999999999999996321
Q ss_pred -----------------cC-CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------cccccC------
Q 003033 676 -----------------SG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKNLLD------ 722 (855)
Q Consensus 676 -----------------~~-~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~---------~~~~~d------ 722 (855)
.. .++.++||||||+++|+|+||++||...+.......... +.....
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 11 467789999999999999999999976554332211100 000000
Q ss_pred ---CCCCC-----CChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 ---PLAGD-----WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ---~~~~~-----~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.... .....+..+.+++.+||..||.+||++ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-~~ll 278 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA-EQAL 278 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH-HHHh
Confidence 00000 011245689999999999999999999 5554
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-31 Score=264.34 Aligned_cols=217 Identities=24% Similarity=0.422 Sum_probs=173.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~ 600 (855)
++.|++...||+|.|+.||++... |..+|+|+++... ..+.+.+.+|+.|...|+|||||+|.....+ ..|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 346777888999999999998765 5778888886543 3356788899999999999999999998743 578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeeccc----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEF---- 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~---- 673 (855)
|+|.||+|..-+-.+ ..+++...-.++.||+.+|.|+|. ++|||||+||.|+||.. .--+||+|||+
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999997655322 346778888999999999999999 89999999999999953 35689999963
Q ss_pred --------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCCChh
Q 003033 674 --------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 674 --------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
+...+|+..+|||+.|||||-|+.|.+||.+.+.-. +.+.. ...|-..+.|+ .
T Consensus 164 ~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~----g~yd~~~~~w~-~ 238 (355)
T KOG0033|consen 164 NDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKA----GAYDYPSPEWD-T 238 (355)
T ss_pred CCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhc----cccCCCCcccC-c
Confidence 234567889999999999999999999998743322 22222 23344445676 4
Q ss_pred hHHHHHHHHHHhhccCCCCCCCh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+++..+|+.+||..||.+|.|.
T Consensus 239 is~~Ak~LvrrML~~dP~kRIta 261 (355)
T KOG0033|consen 239 VTPEAKSLIRRMLTVNPKKRITA 261 (355)
T ss_pred CCHHHHHHHHHHhccChhhhccH
Confidence 56789999999999999999997
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=259.54 Aligned_cols=221 Identities=26% Similarity=0.441 Sum_probs=178.5
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
+|...+.||.|+||.||++... +..||+|.+..... .....+.+|+++++.++|||++++++.+ .+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999887 68899999976543 3456788999999999999999999887 3467899999
Q ss_pred cCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 603 LPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
+++++|.+++.... ....+++..+..++.+++.||.|||. ++++|+||+|+|||++.++.++|+|||+..
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999985432 13579999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++||||||+++|+|++|.+||............ ......+ .|...+..+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~ 231 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI--LKGQYPP----IPSQYSSEL 231 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH--hcCCCCC----CCCCCCHHH
Confidence 234567899999999999999999999755432211111 1111122 233445789
Q ss_pred HHHHHHhhccCCCCCCChHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+++.+||..+|.+||++ .+++
T Consensus 232 ~~~i~~~l~~~p~~Rp~~-~~ll 253 (258)
T cd08215 232 RNLVSSLLQKDPEERPSI-AQIL 253 (258)
T ss_pred HHHHHHHcCCChhhCcCH-HHHh
Confidence 999999999999999999 5554
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-29 Score=276.47 Aligned_cols=225 Identities=22% Similarity=0.327 Sum_probs=173.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
..++|...+.||+|+||.||++... +..||||.+...... ....+.+|+.+|++++||||+++++++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 3567999999999999999999875 578999998653221 23468899999999999999999998732
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
.+++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 358999999 7899888742 358999999999999999999999 7999999999999999999999999985
Q ss_pred ccc-----------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-------------
Q 003033 674 LAS-----------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------- 717 (855)
Q Consensus 674 ~~~-----------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~------------- 717 (855)
... ..++.++|||||||++|+|++|++||...............
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07880 165 ARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQ 244 (343)
T ss_pred ccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhc
Confidence 321 23567899999999999999999999765433221111000
Q ss_pred ----ccccCCC-------CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 ----KNLLDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ----~~~~d~~-------~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....... ...+....+..+.+++.+|++.||.+||++ .+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~-~~~l 296 (343)
T cd07880 245 SEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITA-AEAL 296 (343)
T ss_pred chhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCH-HHHh
Confidence 0000000 000111234568999999999999999999 5554
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-29 Score=276.69 Aligned_cols=236 Identities=20% Similarity=0.277 Sum_probs=177.7
Q ss_pred ccccchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEec
Q 003033 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590 (855)
Q Consensus 515 ~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g 590 (855)
++.....++...+++|.....||+|+||.||+|... +..||+|++..... .....+.+|+.++.+++||||+++++
T Consensus 4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 4 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred chhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 344445566677889999999999999999999864 57899999875321 22456888999999999999999999
Q ss_pred eec--------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC
Q 003033 591 ACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662 (855)
Q Consensus 591 ~~~--------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~ 662 (855)
++. ...+++++++ +++|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 155 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcC
Confidence 873 2357888877 7899888742 248999999999999999999999 79999999999999999
Q ss_pred CCcEEEeeccccc-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----c
Q 003033 663 NFVSKLSDFEFLA-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G 715 (855)
Q Consensus 663 ~~~~KL~DFg~~~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~ 715 (855)
++.+||+|||+.. ...++.++|||||||++|+|++|++||............ +
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 156 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred CCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999997432 124577899999999999999999999654332211000 0
Q ss_pred c--------------------cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 716 K--------------------LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 716 ~--------------------~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. +...............+..+.+|+.+|+..||.+||+. .+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-~e~l 298 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-AQAL 298 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCH-HHHh
Confidence 0 00000000000011234678999999999999999998 5553
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=267.48 Aligned_cols=224 Identities=24% Similarity=0.354 Sum_probs=171.0
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcC-CCcceeEecee--cCceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
|...+.||.|+||.||+|... +..|+||.+...... ......+|+..+.+++ ||||+++++++ .+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566788999999999999985 578999998754321 2234567999999999 99999999988 34688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
+|+|.+++.... ...+++..+..++.|++.+|.|||+ ++++|+||+|.||+++.++.++|+|||+..
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY 155 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence 889999885432 2468999999999999999999999 799999999999999999999999996321
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-------------------ccc
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-------------------LKN 719 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-------------------~~~ 719 (855)
...++.++||||||+++|+|++|++||.............. +..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 12356789999999999999999999965543322211100 000
Q ss_pred ccCCC----CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 LLDPL----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ~~d~~----~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+... ...+....+..+.+++.+||..+|.+||++ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~ 278 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTA-SQAL 278 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCH-HHHh
Confidence 00000 000011124679999999999999999999 6664
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=270.94 Aligned_cols=221 Identities=28% Similarity=0.366 Sum_probs=171.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
..|...+.||+|+||.||+|... +..||||.+...... ....+.+|+.+++.++|||++++++++. ...++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777788999999999999875 578999998653222 2346788999999999999999999873 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+. |+|.+++... ..++++..+..++.+++.||.|||+ .+++||||||+|||++.++.+||+|||+..
T Consensus 95 e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 6888776432 3458899999999999999999998 799999999999999999999999997422
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
.+.++.++|||||||++|+|++|.+||.............. ... +. ..+...+..+
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~-~~--~~~~~~~~~~ 243 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NES-PA--LQSGHWSEYF 243 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCC-CC--cCcccccHHH
Confidence 13467789999999999999999999865433222111110 000 10 0112345678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+|+.+||..+|.+||++ ++++.
T Consensus 244 ~~li~~cl~~~P~~Rp~~-~~ll~ 266 (308)
T cd06634 244 RNFVDSCLQKIPQDRPTS-EVLLK 266 (308)
T ss_pred HHHHHHHhhCCcccCCCH-HHHhh
Confidence 999999999999999998 66653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=267.89 Aligned_cols=213 Identities=24% Similarity=0.274 Sum_probs=163.2
Q ss_pred eeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHH---HHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDI---LSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~i---L~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.||+|+||.||++... +..||||.+....... ...+..|..+ ++...||||+.+++++. +..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999998764 5789999987653221 2234445444 44457999999999874 46889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+|+|.+++.. ...+++..+..|+.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+..
T Consensus 81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 154 (278)
T cd05606 81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 154 (278)
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcC
Confidence 9999998843 3469999999999999999999999 799999999999999999999999997421
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH-HHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~-~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...++.++|||||||++|+|++|++||....... ...... .......+|...+..+.++
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~l 229 (278)
T cd05606 155 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----TLTMAVELPDSFSPELRSL 229 (278)
T ss_pred cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH-----hhccCCCCCCcCCHHHHHH
Confidence 1246788999999999999999999996542111 011110 0111223444456789999
Q ss_pred HHHhhccCCCCCC-----ChHHHHH
Q 003033 740 AMRCCEMSRKSRP-----ELGKDVW 759 (855)
Q Consensus 740 ~~~Cl~~dP~~RP-----s~~~evl 759 (855)
+.+|+..+|.+|| ++ .+++
T Consensus 230 i~~~l~~~p~~R~~~~~~~~-~~ll 253 (278)
T cd05606 230 LEGLLQRDVNRRLGCLGRGA-QEVK 253 (278)
T ss_pred HHHHhhcCHHhccCCCCCCH-HHHH
Confidence 9999999999999 66 5553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-29 Score=269.17 Aligned_cols=226 Identities=25% Similarity=0.345 Sum_probs=170.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC--------
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------- 594 (855)
.++|...++||.|+||.||+|... +..||||.+...... ....+.+|+++++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999876 578999998654322 23467899999999999999999987621
Q ss_pred --ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 595 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 595 --~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
..++||||+. ++|...+.. ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence 3589999996 467777643 23469999999999999999999999 799999999999999999999999997
Q ss_pred ccc-------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-
Q 003033 673 FLA-------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT- 714 (855)
Q Consensus 673 ~~~-------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~- 714 (855)
+.. ...++.++|||||||++|+|++|++||............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 431 112567899999999999999999999755443211110
Q ss_pred ---cc-----------cccccC-CCCCCCC-------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 715 ---GK-----------LKNLLD-PLAGDWP-------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 715 ---~~-----------~~~~~d-~~~~~~p-------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+. +....+ ......+ ......+.+++.+||..||.+||++ .+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~-~ell 306 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTA-SDAL 306 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCH-HHHh
Confidence 00 000000 0000011 1122568899999999999999998 5553
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=270.67 Aligned_cols=225 Identities=16% Similarity=0.205 Sum_probs=159.7
Q ss_pred CCccccceeeccCceEEEEEEECCe-----EEEEEEecCCCCCChh-----------hHHHHHHHHHhcCCCcceeEece
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHM-----QVAIKMLHPHSLQGPS-----------EFQQEIDILSKIRHPNLVTLVGA 591 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~-----~VAvK~l~~~~~~~~~-----------~f~~Ei~iL~~l~HpnIV~l~g~ 591 (855)
..|.+.++||+|+||.||+|.+.+. .+|+|+.......... ....+...+..+.|+||+.++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5789999999999999999987643 5677764432211110 11223344556789999999987
Q ss_pred ecC------ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc
Q 003033 592 CPE------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 592 ~~~------~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
+.. ..+++++++. .++.+.+.. ....++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCc
Confidence 632 2357788774 467666632 2235788889999999999999999 79999999999999999999
Q ss_pred EEEeeccccc--------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH-
Q 003033 666 SKLSDFEFLA--------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL- 712 (855)
Q Consensus 666 ~KL~DFg~~~--------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~- 712 (855)
+||+|||+.. ...++.++|||||||++|||++|++||..........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 9999998642 1235678999999999999999999997552211111
Q ss_pred --hhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 713 --DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 713 --~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
..+.+..+..+.. .+...+..+.+++..|+..+|.+||++ +++.+.|
T Consensus 245 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~-~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDY-DALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCH-HHHHHhh
Confidence 1111111111100 111235779999999999999999999 7887765
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=277.02 Aligned_cols=223 Identities=22% Similarity=0.311 Sum_probs=171.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC-----------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----------- 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----------- 594 (855)
.+|...+.||.|+||.||+|... +..||+|.+..........+.+|++++++++||||+++++++..
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57899999999999999999875 57899999977665556778999999999999999999977532
Q ss_pred -----ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-CCCcEEE
Q 003033 595 -----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKL 668 (855)
Q Consensus 595 -----~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~~KL 668 (855)
..++||||++ ++|.+++.. ..+++.....++.||+.||.|||+ .+|+||||||+|||++ .++.+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEE
Confidence 3689999996 589888732 358899999999999999999999 7999999999999997 4567899
Q ss_pred eeccccc-----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---
Q 003033 669 SDFEFLA-----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK--- 716 (855)
Q Consensus 669 ~DFg~~~-----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~--- 716 (855)
+|||+.. ...++.++|||||||++|+|++|++||..............
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 9997431 12345689999999999999999999965443222111000
Q ss_pred ---------cc----c-cc-CCCCCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 ---------LK----N-LL-DPLAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ---------~~----~-~~-d~~~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+. . .. .......| ...+.++.+|+.+||..||.+||++ .+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~ell 298 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA-EEAL 298 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH-HHHh
Confidence 00 0 00 00000111 1234678899999999999999999 6664
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=260.24 Aligned_cols=221 Identities=28% Similarity=0.387 Sum_probs=176.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
+|+...+||+|+||.||++... +..+|+|.+..... .....+.+|+.++++++||||+++++++. ...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778889999999999999775 57899999876432 22456789999999999999999998873 467899999
Q ss_pred cCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 603 LPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
+++++|.+++.... ....+++..+..++.+++.||.|||+ .+++|+||+|.||+++.++.+||+|||+..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999885421 23568999999999999999999999 799999999999999999999999997431
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
...++.++|+||||+++|+|++|++||...+......... .... ...+...+..+.+
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~ 231 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ--RGKY----PPIPPIYSQDLQN 231 (256)
T ss_pred cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCC----CCCchhhCHHHHH
Confidence 2345678999999999999999999997655432211111 1111 1122345577999
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
++.+||..+|.+||++ .+++
T Consensus 232 li~~~l~~~p~~Rp~~-~~~l 251 (256)
T cd08530 232 FIRSMLQVKPKLRPNC-DKIL 251 (256)
T ss_pred HHHHHcCCCcccCCCH-HHHh
Confidence 9999999999999999 5654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=265.00 Aligned_cols=218 Identities=19% Similarity=0.242 Sum_probs=163.5
Q ss_pred CCcccccee--eccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEecee--cCceEEEE
Q 003033 528 HNFDPSLKI--GEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~L--G~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~~LV~ 600 (855)
++|+..+.+ |.|+||.||++... +..+|+|.+....... .|+.+...+ +||||+++++.| .+..++||
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~ 88 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM 88 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence 455555555 99999999999875 5789999987543221 133333323 699999999988 45688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeecccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFL----- 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~----- 674 (855)
||+++|+|.+++... .++++..+..++.||+.||.|||+ .+|+||||||+||+++.++ .++|+|||+.
T Consensus 89 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 89 DYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence 999999999998532 379999999999999999999999 7899999999999999988 9999999742
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
....++.++|||||||++|+|++|+.||.......... ..+..... .....+...+..+.+
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~ 239 (267)
T PHA03390 163 PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL--ESLLKRQQ-KKLPFIKNVSKNAND 239 (267)
T ss_pred CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH--HHHHHhhc-ccCCcccccCHHHHH
Confidence 23456788999999999999999999996433211000 00101111 111222345678999
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
++.+||+.+|.+||+..++++
T Consensus 240 li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 240 FVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred HHHHHhccChhhCCchHHHHh
Confidence 999999999999997435554
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=274.63 Aligned_cols=222 Identities=22% Similarity=0.336 Sum_probs=169.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceecC--------c
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE--------V 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--------~ 595 (855)
.+|.....||+|+||.||+|... +..||||.+..... .....+.+|+.++..++||||++++++|.. .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 57888899999999999999865 68899999875422 123468899999999999999999998732 3
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.++|+||+. ++|..++. ..+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||+..
T Consensus 95 ~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 95 FYLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred EEEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 589999996 47777652 358899999999999999999999 799999999999999999999999997431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc----------------
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------------- 716 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~---------------- 716 (855)
...++.++|||||||++|+|++|+.||...+..........
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T cd07879 166 HADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDK 245 (342)
T ss_pred CCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhccc
Confidence 12356789999999999999999999976543221111000
Q ss_pred -cccccCC----CCCCCC---hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 -LKNLLDP----LAGDWP---FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 -~~~~~d~----~~~~~p---~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....... ....++ ...+..+.+|+.+||+.||.+||++ ++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~-~e~l 295 (342)
T cd07879 246 AAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTA-TEAL 295 (342)
T ss_pred chHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 0000000 000000 1234568899999999999999999 6665
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=269.06 Aligned_cols=224 Identities=24% Similarity=0.299 Sum_probs=173.8
Q ss_pred CccccceeeccCceEEEEEEEC-----CeEEEEEEecCCC----CCChhhHHHHHHHHHhc-CCCcceeEeceec--Cce
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS----LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW 596 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~ 596 (855)
+|.....||+|+||.||++... +..||||.++... ......+.+|+.++.++ +||||+.+++.+. ...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677889999999999998753 4679999987532 12345688999999999 5999999998874 457
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
++||||+++|+|.+++.. ...+++.....++.|++.||.|||+ .+++||||||.|||++.++.++|+|||+...
T Consensus 81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 899999999999999853 2458899999999999999999998 7999999999999999999999999974311
Q ss_pred --------------------------C--CCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCC
Q 003033 677 --------------------------G--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAG 726 (855)
Q Consensus 677 --------------------------~--~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~ 726 (855)
. ..+.++||||||+++|+|++|..||....... ..+...... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-----~~~ 229 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-----SKP 229 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-----cCC
Confidence 1 14568999999999999999999996432211 111111111 111
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
..|...+..+.+++.+||+.||.+||++ ..+...|+.
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~R~t~-~~~~~~l~~ 266 (288)
T cd05583 230 PFPKTMSAEARDFIQKLLEKDPKKRLGA-NGADEIKNH 266 (288)
T ss_pred CCCcccCHHHHHHHHHHhcCCHhhccCc-chHHHHhcC
Confidence 2233345678999999999999999998 666666653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=272.61 Aligned_cols=228 Identities=22% Similarity=0.287 Sum_probs=174.5
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec---C
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP---E 594 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~ 594 (855)
++...+++|...+.||.|+||.||++... +..||||.+..... .....+.+|+.++..++||||++++++|. .
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34456788999999999999999999865 57899998865322 23467889999999999999999999873 3
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||+ +++|..++.. .++++.....++.|++.||.|||+ ++|+||||+|.|||++.++.+||+|||..
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccc
Confidence 578999998 5789888742 357888888999999999999999 79999999999999999999999999732
Q ss_pred c----------------------c-CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-----------------
Q 003033 675 A----------------------S-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----------------- 714 (855)
Q Consensus 675 ~----------------------~-~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----------------- 714 (855)
. + ..++.++|||||||++|+|+||++||............
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 156 RIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred cccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 1 1 34677899999999999999999999654432111000
Q ss_pred cccccccCCC--CCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 715 GKLKNLLDPL--AGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 715 ~~~~~~~d~~--~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+.....+... ....| ...+..+.+++.+||+.+|.+||++ .++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-~el 285 (328)
T cd07856 236 ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISA-AEA 285 (328)
T ss_pred hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCH-HHH
Confidence 0000000000 01111 1234789999999999999999999 555
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=263.21 Aligned_cols=224 Identities=28% Similarity=0.373 Sum_probs=169.0
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhc---CCCcceeEeceec--Cc-----
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI---RHPNLVTLVGACP--EV----- 595 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~--~~----- 595 (855)
|+....||.|+||.||+|..+ +..||||.++..... ....+.+|+.++.++ +||||++++++|. +.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566788999999999999986 588999999754322 134577888888776 5999999999983 33
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.+++|||++ ++|.+++.... ...+++..+..++.+++.||.|||+ .+|+|+||+|+|||++.++.+||+|||+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 789999996 58988885432 2358999999999999999999999 799999999999999999999999997421
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh---ccc------c----
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT---GKL------K---- 718 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~---~~~------~---- 718 (855)
...++.++|||||||++|+|++|.+||............ ... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 234567899999999999999999999765543221111 000 0
Q ss_pred ---cccCCCCCC-C---ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 ---NLLDPLAGD-W---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ---~~~d~~~~~-~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
......... + ....+..+.+++.+||+.||.+||++ .+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~-~~il 282 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISA-FEAL 282 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCH-HHHh
Confidence 000000000 0 01234678899999999999999999 5654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=266.56 Aligned_cols=218 Identities=26% Similarity=0.396 Sum_probs=169.8
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
|.....||+|+||.||+|... +..|+||.+....... ...+.+|+.+++.++|||++++++++. +..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999874 6789999987543322 246788999999999999999999984 457899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+. |+|.+++.. ...++++..+..++.||+.||.|||+ ++|+||||||+||+++.++.+||+|||+..
T Consensus 103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~ 176 (313)
T cd06633 103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANS 176 (313)
T ss_pred CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCC
Confidence 95 678777743 23468999999999999999999998 799999999999999999999999996321
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
.+.++.++|||||||++|+|++|.+||............... .........| +..+.+
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~l~~ 251 (313)
T cd06633 177 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTLQSNEW----TDSFRG 251 (313)
T ss_pred ccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-CCCCCCcccc----CHHHHH
Confidence 234677899999999999999999998655433322221110 0000011122 356899
Q ss_pred HHHHhhccCCCCCCChHHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl 759 (855)
|+.+||+.+|.+||++ .+++
T Consensus 252 li~~~l~~~P~~Rp~~-~~~l 271 (313)
T cd06633 252 FVDYCLQKIPQERPAS-AELL 271 (313)
T ss_pred HHHHHccCChhhCcCH-HHHh
Confidence 9999999999999999 5554
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=277.99 Aligned_cols=223 Identities=26% Similarity=0.360 Sum_probs=172.9
Q ss_pred hcccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCC--CCChhhHHHHHHHHHhcC-CCcceeEecee--cCceE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHS--LQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWT 597 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~ 597 (855)
.....-|+++++||.||.+.||++...+ ..+|+|.+.... .+...-|..|+..|.+|+ |.+||+||+|- .+.+|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 3445679999999999999999998764 567887765432 233567999999999995 99999999985 55789
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc-
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS- 676 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~- 676 (855)
|||||- ..+|..+|..+... ...| .+..+..||+.|+.++|. +||||.||||+|+|+- .|.+||+|||++..
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred EEeecc-cccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 999986 56999999755433 3345 677899999999999999 8999999999999985 48899999984210
Q ss_pred -------------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc
Q 003033 677 -------------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 719 (855)
Q Consensus 677 -------------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~ 719 (855)
-..+.++||||||||||+|+.|++||+...... .++..
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~-----aKl~a 584 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI-----AKLHA 584 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH-----HHHHh
Confidence 125678999999999999999999996433222 23455
Q ss_pred ccCCC-CCCCChhhH-HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 LLDPL-AGDWPFVQA-EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ~~d~~-~~~~p~~~~-~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|. .-+||..-. .++.+++..||..||++||+. .++|
T Consensus 585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si-~eLL 625 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSI-PELL 625 (677)
T ss_pred hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCc-HHHh
Confidence 56652 234444322 239999999999999999999 6663
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=275.06 Aligned_cols=215 Identities=24% Similarity=0.305 Sum_probs=164.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~ 600 (855)
.-|..++.||-|+||+|.++.-. +..+|.|.|++.+... ......|.+||.....++||+||..|++ .+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 35777889999999999988543 4568999998764332 3457789999999999999999999964 689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------- 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------- 673 (855)
+|++||++..+|... ..|++.....++.++.+|+++.|. .|+|||||||+|||||.+|++||+|||+
T Consensus 709 dYIPGGDmMSLLIrm---gIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM---GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHh---ccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceec
Confidence 999999999998533 458888888999999999999999 8999999999999999999999999962
Q ss_pred ------------------------------------------------------------cccCCCCcchhHHHHHHHHH
Q 003033 674 ------------------------------------------------------------LASGELTPKSDVYSFGIILL 693 (855)
Q Consensus 674 ------------------------------------------------------------~~~~~~t~ksDVwSfGvvl~ 693 (855)
+....|+..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 12234667799999999999
Q ss_pred HHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 003033 694 RLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 752 (855)
Q Consensus 694 elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RP 752 (855)
||+.|++||-.............+...++- .+-...+.+..+||.+++. +++.|-
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~---~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHI---PYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhcccc---ccccccCHHHHHHHHHHhc-Chhhhh
Confidence 999999999544332222222333333331 1122344566666665433 444554
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=263.84 Aligned_cols=214 Identities=27% Similarity=0.392 Sum_probs=174.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcC-CCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV 599 (855)
++|.....||.|+||.||+|... +..||+|++..... .....+.+|+.++.+++ ||||+++++++. +..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999885 68899999876422 22356889999999998 999999999874 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++++|.+++.. ...+++..+..|+.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+..
T Consensus 81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 999999999999953 2369999999999999999999999 799999999999999999999999997422
Q ss_pred -----------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003033 676 -----------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 714 (855)
Q Consensus 676 -----------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~ 714 (855)
...++.++||||||+++++|++|++||............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 234 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 112456799999999999999999999766543321111
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
. .....+|...+..+.+|+.+||+.+|.+||++
T Consensus 235 ~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 235 L-------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred H-------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 0 11122344446789999999999999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=260.22 Aligned_cols=220 Identities=21% Similarity=0.326 Sum_probs=170.3
Q ss_pred CccccceeeccCceEEEEEEECC--eEEEEEEecCCCC-----CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~-----~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
+|.+.++||+|+||.||++.... ..+++|+++.... .....+.+|+.++++++||||+++++++. +..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36778899999999999998763 3466666554221 22345778999999999999999999884 468899
Q ss_pred EEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 600 YEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
|||+++++|.+++... .....+++..+..++.|++.||.|||+ ++++|+||||+||+++. +.+||+|||+..
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988532 234569999999999999999999999 89999999999999975 569999997421
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
...++.++||||||+++|+|++|..||............ ........+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 230 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI------VEGPTPSLPETYS 230 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH------HcCCCCCCcchhc
Confidence 123466899999999999999999999654433222111 1111122344556
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.+++.+||..+|.+||++ .+++
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~-~~il 255 (260)
T cd08222 231 RQLNSIMQSMLNKDPSLRPSA-AEIL 255 (260)
T ss_pred HHHHHHHHHHhcCChhhCcCH-HHHh
Confidence 789999999999999999999 5654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=262.09 Aligned_cols=223 Identities=29% Similarity=0.429 Sum_probs=172.9
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
|+....||.|+||.||+|... +..||+|.+.... ......+..|+.++++++||||+++++++. +..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999886 5889999998753 223467889999999999999999999884 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
+ ++|.+++.... ..+++..+..++.+++.||.|||. ++|+||||+|+||+++.++.+||+|||+..
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 7 58999985332 468999999999999999999999 799999999999999999999999997421
Q ss_pred -----------------cC-CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------------ccc--cCC
Q 003033 676 -----------------SG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------KNL--LDP 723 (855)
Q Consensus 676 -----------------~~-~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~------------~~~--~d~ 723 (855)
.. .++.++|||||||++|+|++|++||............... ..+ .+.
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 11 4567899999999999999999999765543322111000 000 000
Q ss_pred CCCCCCh--------hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 LAGDWPF--------VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 ~~~~~p~--------~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....|+. ..+..+.+++.+||..+|.+||++ .+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-~~~l 277 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISA-KEAL 277 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCH-HHHh
Confidence 0001110 124679999999999999999999 6654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=273.44 Aligned_cols=222 Identities=24% Similarity=0.311 Sum_probs=181.4
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEecee--cCceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~L 598 (855)
..+.|..-+.||+||||.||-+..+ |+.+|.|.+.+... .+....+.|-.||.+++.|.||.|-.+| .+.+||
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3456888889999999999988765 67799998865432 2344567899999999999999998877 568999
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----- 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----- 673 (855)
||..|.||+|.-+|.+.+ .+.++....+.++.+|+.||.+||. .+||.|||||+|||||+.|+++|+|+|+
T Consensus 263 VLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999887554 3679999999999999999999999 8999999999999999999999999963
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+..+.|+...|+|||||+||||+.|+.||....+- .....+...+......+|...++
T Consensus 339 ~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK---vk~eEvdrr~~~~~~ey~~kFS~ 415 (591)
T KOG0986|consen 339 EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK---VKREEVDRRTLEDPEEYSDKFSE 415 (591)
T ss_pred CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh---hhHHHHHHHHhcchhhcccccCH
Confidence 34566899999999999999999999999633221 11112222222333456777788
Q ss_pred HHHHHHHHhhccCCCCCCCh
Q 003033 735 QLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~ 754 (855)
++.+|....|+.||.+|--.
T Consensus 416 eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 416 EAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHHHHHHHccCHHHhccC
Confidence 99999999999999999765
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=270.18 Aligned_cols=224 Identities=25% Similarity=0.338 Sum_probs=173.2
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceecC-------ceE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT 597 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------~~~ 597 (855)
+|.....||.|+||.||+|... +..||||.+.... ....+.+.+|+.+++.++||||+++++++.. ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778889999999999999875 5789999987653 3345678999999999999999999998732 478
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||++ ++|.+++.. ..++++..+..++.+|+.||.|||+ ++|+||||||.|||++.++.++|+|||+..
T Consensus 81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 589888843 2379999999999999999999999 799999999999999999999999997422
Q ss_pred --------------------------cC-CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc--------
Q 003033 676 --------------------------SG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK-------- 716 (855)
Q Consensus 676 --------------------------~~-~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~-------- 716 (855)
.. .++.++|||||||++|+|++|++||............ +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 11 4566899999999999999999999765533211110 00
Q ss_pred -----cccccCCC----CCCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 717 -----LKNLLDPL----AGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 717 -----~~~~~d~~----~~~~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
....+... ...| ....+..+.+|+.+||+.+|.+||++ .+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~ll~ 288 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITA-DEALA 288 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCH-HHHHh
Confidence 00000000 0000 11235678999999999999999999 66653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=285.20 Aligned_cols=171 Identities=33% Similarity=0.531 Sum_probs=146.9
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec--------CceEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------EVWTL 598 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~~~~L 598 (855)
+.....||+||||.||+|+.+ |..||||.++... ....+...+|+++|++|+|||||+++++-. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 445667999999999999865 7889999998764 334567889999999999999999998752 23569
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC----CCCcEEEeecccc
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD----ANFVSKLSDFEFL 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld----~~~~~KL~DFg~~ 674 (855)
|||||++|||...|..-.+...|+....+.++.+++.||.|||. ++||||||||.||++- ..-.-||+|||++
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999877777889999999999999999999998 8999999999999982 3335699999843
Q ss_pred c-------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 003033 675 A-------------------------SGELTPKSDVYSFGIILLRLLTGRPALG 703 (855)
Q Consensus 675 ~-------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~ 703 (855)
. .+.|+.-+|.|||||++|+++||..||-
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 2 2567888999999999999999999983
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=290.00 Aligned_cols=228 Identities=18% Similarity=0.236 Sum_probs=155.8
Q ss_pred cCCccccceeeccCceEEEEEEECC---eEEEEEEec--------------C---CCCCChhhHHHHHHHHHhcCCCcce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLH--------------P---HSLQGPSEFQQEIDILSKIRHPNLV 586 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~--------------~---~~~~~~~~f~~Ei~iL~~l~HpnIV 586 (855)
..+|.+..+||+|+||.||++.++. ..+++|.+. . ........|.+|+.+|.+++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3579999999999999999987642 112222110 0 0111234578999999999999999
Q ss_pred eEecee--cCceEEEEEecCCCCHHHHhcccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC
Q 003033 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662 (855)
Q Consensus 587 ~l~g~~--~~~~~LV~Ey~~~GsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~ 662 (855)
++++++ .+..++|++++ +++|.+++..... ...........|+.||+.||.|||+ ++||||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECC
Confidence 999998 44678999998 4677777643211 1123345677899999999999999 79999999999999999
Q ss_pred CCcEEEeeccccc--------------------------cCCCCcchhHHHHHHHHHHHHhCCC-CCCCc--hHHHHHHh
Q 003033 663 NFVSKLSDFEFLA--------------------------SGELTPKSDVYSFGIILLRLLTGRP-ALGIT--KEVQYALD 713 (855)
Q Consensus 663 ~~~~KL~DFg~~~--------------------------~~~~t~ksDVwSfGvvl~elltG~~-pf~~~--~~~~~~~~ 713 (855)
++.+||+|||+.. ...++.++|||||||+||||++|.. |+... ........
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 9999999998531 2346778999999999999999874 44321 11111111
Q ss_pred hcc-c----ccccCC---------------CCCCCCh-----hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 714 TGK-L----KNLLDP---------------LAGDWPF-----VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 714 ~~~-~----~~~~d~---------------~~~~~p~-----~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.-. + ..+.+. .....+. .....+.+++.+||.+||.+||++ .+++
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa-~elL 452 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA-AELL 452 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCH-HHHh
Confidence 000 0 000000 0000000 122457788999999999999999 6664
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=272.65 Aligned_cols=225 Identities=20% Similarity=0.289 Sum_probs=172.8
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--C-----
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--E----- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~----- 594 (855)
..++|.....||.|+||.||+|... +..||||++.... ......+.+|+.++++++||||+++++++. +
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567999999999999999999886 5789999987532 123356788999999999999999988763 2
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 278999998 6799998842 358999999999999999999999 7999999999999999999999999974
Q ss_pred ccc-----------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc-----------
Q 003033 674 LAS-----------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN----------- 719 (855)
Q Consensus 674 ~~~-----------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~----------- 719 (855)
... ..++.++|||||||++|+|+||++||.................
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (343)
T cd07851 165 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKIS 244 (343)
T ss_pred cccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcc
Confidence 321 2356789999999999999999999965543322111000000
Q ss_pred ------ccC----CCCCCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 ------LLD----PLAGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ------~~d----~~~~~~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+. .....+ ....+..+.+|+.+||..+|.+||++ .+|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~-~ell 296 (343)
T cd07851 245 SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITA-AEAL 296 (343)
T ss_pred chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCH-HHHh
Confidence 000 000000 01235679999999999999999999 5653
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=277.75 Aligned_cols=219 Identities=26% Similarity=0.379 Sum_probs=178.1
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEecee--cCceE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWT 597 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~ 597 (855)
......|.+...||+|.|+.|..|+.. ++.||||.+++..... ...+.+|+++|..|+|||||+|+.+. +..+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 345678999999999999999999875 6889999998765433 35688999999999999999999987 56799
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+.+|.++++|...+ .+.......++.|+..|++|||+ +.|||||||++||||+.+.++||+|||+..
T Consensus 132 lV~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceee
Confidence 9999999999999996443 34457788899999999999999 899999999999999999999999997421
Q ss_pred ----------------------c-CCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCCCh
Q 003033 676 ----------------------S-GELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 ----------------------~-~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
+ ...++.+|+||+|++||-|+.|..||++..-. +.-...+++ ..|.
T Consensus 206 ~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~---------rIp~ 276 (596)
T KOG0586|consen 206 DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY---------RIPF 276 (596)
T ss_pred cccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee---------cccc
Confidence 1 12367899999999999999999999754321 111111111 2344
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
..+.+..+|+.+++-++|.+|+++ +++
T Consensus 277 ~ms~dce~lLrk~lvl~Pskr~~~-dqi 303 (596)
T KOG0586|consen 277 YMSCDCEDLLRKFLVLNPSKRGPC-DQI 303 (596)
T ss_pred eeechhHHHHHHhhccCccccCCH-HHh
Confidence 556778899999999999999998 555
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=266.38 Aligned_cols=222 Identities=23% Similarity=0.322 Sum_probs=167.1
Q ss_pred CccccceeeccCceEEEEEEECC----eEEEEEEecCCCC--CChhhHHHHHHHHHhc-CCCcceeEeceec------Cc
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL--QGPSEFQQEIDILSKI-RHPNLVTLVGACP------EV 595 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~------~~ 595 (855)
+|...+.||+|+||.||++...+ ..||||.+..... .....+.+|+.++.++ .||||+++++.+. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 47778899999999999998864 5799999875321 1245688999999999 5999999998641 24
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.++++||+. ++|.+++. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678889885 68998884 23468999999999999999999999 799999999999999999999999998431
Q ss_pred ------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH---Hh---------
Q 003033 676 ------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA---LD--------- 713 (855)
Q Consensus 676 ------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~---~~--------- 713 (855)
...++.++|||||||++|+|++|.+||...+..... +.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 013466899999999999999999999754321110 00
Q ss_pred -----hcc-------ccccc-CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 714 -----TGK-------LKNLL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 714 -----~~~-------~~~~~-d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... +.... .+....++ .....+.+|+.+||..||.+||++ .+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~R~t~-~~ll 290 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFP-NANPLALDLLEKLLAFDPTKRISV-EEAL 290 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCC-CCCHHHHHHHHHHccCCcccCCCH-HHHh
Confidence 000 00000 00001111 134679999999999999999999 5553
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=263.26 Aligned_cols=214 Identities=24% Similarity=0.291 Sum_probs=176.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChh---hHHHHHHHHHhcCCCcceeEecee--cCceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~---~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV 599 (855)
.++|+.++.||+|.||.|-.++-+ ++.+|||++++.-..... .-+.|-.+|...+||.+..|...| .+.+|.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 467899999999999999988765 678999999987544333 456799999999999999998877 4689999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
|||..||.|.-+|.. ...++......+..+|..||.|||+ ++||.||||.+|+|||.+|++||+|||+.
T Consensus 247 MeyanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhh---hhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 999999999988853 3468888888899999999999999 89999999999999999999999999743
Q ss_pred --------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 675 --------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 675 --------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
....|+..+|+|.+|||+|||++|+.||...+.-. +..++-.-...+|...+.
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-------LFeLIl~ed~kFPr~ls~ 393 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-------LFELILMEDLKFPRTLSP 393 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-------HHHHHHhhhccCCccCCH
Confidence 23457888999999999999999999997554322 111111112346777788
Q ss_pred HHHHHHHHhhccCCCCCCC
Q 003033 735 QLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs 753 (855)
+...|+...|..||++|--
T Consensus 394 eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 394 EAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred HHHHHHHHHhhcChHhhcC
Confidence 8999999999999999954
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-29 Score=254.97 Aligned_cols=219 Identities=22% Similarity=0.328 Sum_probs=167.6
Q ss_pred cccceeeccCceEEEEEEECC--eEEEEEEecCCCC-CChhhHHHHHHHHHhcC-CCcceeEeceec--CceEEEEEecC
Q 003033 531 DPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL-QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
..+..||.|+.|.|+++.++. ..+|||.+..... ...++++..++++.+.+ +|.||+.+|+|- ...++.||.|.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 344569999999999999874 8899999987643 34567888888887775 899999999983 34668889883
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
..++.+|. ....++++...-++..-+..||.||-.. ++|||||+||+|||||..|++||||||+..
T Consensus 175 -~C~ekLlk--rik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht 249 (391)
T KOG0983|consen 175 -TCAEKLLK--RIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT 249 (391)
T ss_pred -HHHHHHHH--HhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence 45666664 2345689988889999999999999875 589999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...|+.++|||||||+|+||+||+.||.+.+..-..+.. +.+-..|.. +.-...+..+.
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk--vln~ePP~L-~~~~gFSp~F~ 326 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK--VLNEEPPLL-PGHMGFSPDFQ 326 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH--HHhcCCCCC-CcccCcCHHHH
Confidence 234677899999999999999999999875432222211 111111211 11112568899
Q ss_pred HHHHHhhccCCCCCCChHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+++..||..|+.+||.. .++
T Consensus 327 ~fv~~CL~kd~r~RP~Y-~~L 346 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKY-NKL 346 (391)
T ss_pred HHHHHHhhcCcccCcch-HHH
Confidence 99999999999999998 554
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-28 Score=253.06 Aligned_cols=207 Identities=29% Similarity=0.371 Sum_probs=168.4
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 608 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL 608 (855)
||.|+||.||++... +..||+|.+...... ....+..|+.++++++||||+++++.+. +..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999886 588999998765432 2457889999999999999999999874 457899999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------- 675 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------- 675 (855)
.+++... ..+++.....++.|++.||.|||. .+++|+||+|.||+++.++.++|+|||...
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKE---GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 9998532 368999999999999999999999 799999999999999999999999997431
Q ss_pred ------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHh
Q 003033 676 ------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743 (855)
Q Consensus 676 ------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~C 743 (855)
....+.++|+||||+++|+|++|..||............ . . ....+|...+..+.+++.+|
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~----~-~~~~~~~~~~~~l~~~i~~~ 227 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKI--L----K-DPLRFPEFLSPEARDLISGL 227 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--h----c-CCCCCCCCCCHHHHHHHHHH
Confidence 122456899999999999999999999755432211111 0 0 11234444567899999999
Q ss_pred hccCCCCCCChH
Q 003033 744 CEMSRKSRPELG 755 (855)
Q Consensus 744 l~~dP~~RPs~~ 755 (855)
|..||.+||+++
T Consensus 228 l~~~p~~R~~~~ 239 (250)
T cd05123 228 LQKDPTKRLGSG 239 (250)
T ss_pred hcCCHhhCCCcc
Confidence 999999999994
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=235.02 Aligned_cols=221 Identities=28% Similarity=0.394 Sum_probs=170.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
+|+..++||+|.||+||+|+.+ +..||+|.++.+... -+...++||.+|+.++|.|||+|++.. ...+.||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 5677789999999999999876 467999998865432 356789999999999999999999987 3467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
| ..+|..+.... ++.++......++.|++.||.|+|+ ++++||||||.|+||+.+|.+|++|||+.
T Consensus 83 c-dqdlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 C-DQDLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred h-hHHHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 9 46888877432 3568888999999999999999999 78999999999999999999999999842
Q ss_pred ------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCCh-----
Q 003033 675 ------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF----- 730 (855)
Q Consensus 675 ------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~----- 730 (855)
...-|++..|+||-|||+.|+.. |+|.|.+.+...+.... +..+-.+....||.
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkri--f~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI--FRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHH--HHHhCCCccccCCccccCC
Confidence 22347889999999999999976 78888776654443322 11111222223331
Q ss_pred ----------------h---hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 731 ----------------V---QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 731 ----------------~---~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
. ....-.+|+.+.+..+|.+|.++ +..
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisa-eaa 280 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISA-EAA 280 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCH-HHH
Confidence 1 11234688888888999999988 443
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-29 Score=297.29 Aligned_cols=222 Identities=25% Similarity=0.326 Sum_probs=174.8
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWT 597 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~ 597 (855)
...+-++....+||.|.||.||.|... |...|+|-++.... .....+.+|..+|..|+|||||++||+= .+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 445567778889999999999998764 56789998875432 2345678999999999999999999975 56788
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
|.||||.+|+|.+++.. ...+++.....+..|++.||.|||. +|||||||||+||||+.+|.+|++|||.+
T Consensus 1311 IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999843 3346677777889999999999999 89999999999999999999999999732
Q ss_pred ---------------cc--------------CCCCcchhHHHHHHHHHHHHhCCCCCCCc-hHHHHHHhhcccccccCCC
Q 003033 675 ---------------AS--------------GELTPKSDVYSFGIILLRLLTGRPALGIT-KEVQYALDTGKLKNLLDPL 724 (855)
Q Consensus 675 ---------------~~--------------~~~t~ksDVwSfGvvl~elltG~~pf~~~-~~~~~~~~~~~~~~~~d~~ 724 (855)
.+ ....-+.||||+|||++||+||+.||... ++++..+..+.. -
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g------h 1458 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG------H 1458 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc------C
Confidence 11 12234689999999999999999999633 333333222211 1
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 725 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 725 ~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+..|...+.+-.+++.+||+.||+.|-++ .++
T Consensus 1459 ~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~-~ql 1491 (1509)
T KOG4645|consen 1459 KPQIPERLSSEGRDFLEHCLEQDPKMRWTA-SQL 1491 (1509)
T ss_pred CCCCchhhhHhHHHHHHHHHhcCchhhhHH-HHH
Confidence 234566678889999999999999999766 444
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-29 Score=259.06 Aligned_cols=222 Identities=24% Similarity=0.304 Sum_probs=168.7
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEecee--cCceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
.+.+..||.|+||+|+|-.++ ++..|||.++.... ...++|+.|.++..+- +.||||++||++ .+..++.||.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 344567999999999998776 68899999987654 4567899999876665 699999999987 44677999999
Q ss_pred CCCCHHHHhcc--cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 604 PNGSLEDRLSC--KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 604 ~~GsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
..||..+... .-....+++...-.|..-...||.||-.. ..|||||+||+|||||..|.+||||||+..
T Consensus 146 -d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 146 -DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred -hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence 4577654421 11223578888888888899999999875 579999999999999999999999997321
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC---hhh
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP---FVQ 732 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p---~~~ 732 (855)
...|+.+||||||||+|||+.||+.|+...+.+-..+.. ...-||.....+ ...
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~---Vv~gdpp~l~~~~~~~~~ 299 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ---VVIGDPPILLFDKECVHY 299 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH---HHcCCCCeecCccccccc
Confidence 124788999999999999999999999765544322211 111122211222 236
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+..+..++..|+..|..+||.. +.+
T Consensus 300 s~~~~~fintCl~Kd~~~Rpky-~~L 324 (361)
T KOG1006|consen 300 SFSMVRFINTCLIKDRSDRPKY-DDL 324 (361)
T ss_pred CHHHHHHHHHHhhcccccCcch-hhh
Confidence 6789999999999999999999 554
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=285.56 Aligned_cols=229 Identities=29% Similarity=0.469 Sum_probs=186.5
Q ss_pred cccCCccccceeeccCceEEEEEEEC---------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP 593 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~ 593 (855)
....++...+.||+|.||.|++|... ...||||.++..... ..+.+..|+++|..+ +|||||.++|+|.
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 33444555668999999999999754 246999999865433 456799999999999 5999999999995
Q ss_pred C--ceEEEEEecCCCCHHHHhcccC------CC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCce
Q 003033 594 E--VWTLVYEYLPNGSLEDRLSCKD------NS-------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658 (855)
Q Consensus 594 ~--~~~LV~Ey~~~GsL~~~L~~~~------~~-------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NI 658 (855)
. ..++|+||+..|+|.++|.... .. ..|+....+.++.|||.|+.||++ .++|||||-..||
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNV 449 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNV 449 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhE
Confidence 4 6789999999999999996544 00 238899999999999999999999 7899999999999
Q ss_pred eeCCCCcEEEeeccccc----------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCch---
Q 003033 659 LLDANFVSKLSDFEFLA----------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITK--- 706 (855)
Q Consensus 659 Lld~~~~~KL~DFg~~~----------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~--- 706 (855)
|+..+..+||+|||++. ...|+.++|||||||+||||+| |..||.+..
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 99999999999998653 1247889999999999999999 889997632
Q ss_pred HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 707 EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 707 ~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+...+..| .....|..+..++.+++..||+.+|.+||++ .++.+.++..
T Consensus 530 ~l~~~l~~G--------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F-~~~~~~~~~~ 579 (609)
T KOG0200|consen 530 ELLEFLKEG--------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTF-SECVEFFEKH 579 (609)
T ss_pred HHHHHHhcC--------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCH-HHHHHHHHHH
Confidence 222222222 2334567778899999999999999999999 7888888874
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=254.07 Aligned_cols=226 Identities=26% Similarity=0.375 Sum_probs=170.6
Q ss_pred CCccccceeeccCceEEEEEEECC------eEEEEEEecCCCCC-C-hhhHHHHHHHHHhcCCCcceeEeceec---Cce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTLVGACP---EVW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~~-~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~ 596 (855)
..|+...+||+|+||.||++.-.+ ..+|||.++..... + .....+|+.+++.|+|||||.|..+|- ...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 468888899999999999996542 36899999865322 2 345679999999999999999988873 357
Q ss_pred EEEEEecCCCCHHHHhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC----CcEEEee
Q 003033 597 TLVYEYLPNGSLEDRLSCK--DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN----FVSKLSD 670 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~--~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~----~~~KL~D 670 (855)
+|++||.+. +|...++.. .....++-.....|+.||+.|+.|||+ +-|+||||||+|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence 899999975 788877432 223468889999999999999999999 789999999999999777 9999999
Q ss_pred ccc-----------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-------HHHHhh
Q 003033 671 FEF-----------------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-------QYALDT 714 (855)
Q Consensus 671 Fg~-----------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-------~~~~~~ 714 (855)
||+ +....||++.||||.|||+.||+|-.|.|.+...- +.....
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 983 23456899999999999999999999988643321 000000
Q ss_pred cccccccCCCCCCCChh--------------------------------hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 715 GKLKNLLDPLAGDWPFV--------------------------------QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~~--------------------------------~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
..+.-+--|...+||.. -+....+|+.++|.+||.+|.|. ++.
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta-~qA 334 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA-EQA 334 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH-HHH
Confidence 11111222333445421 01347789999999999999998 544
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=288.57 Aligned_cols=221 Identities=26% Similarity=0.391 Sum_probs=165.5
Q ss_pred CCccccceeeccCceEEEEEEE--CCeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEecee------------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC------------ 592 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~------------ 592 (855)
.+|+.+..||+||||.||+++. .|+.||||++.... ......+.+|+.+|++|+|||||++|.++
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 5788899999999999999865 48999999998654 12235688999999999999999987431
Q ss_pred ------------------------------------------------c-------------------------------
Q 003033 593 ------------------------------------------------P------------------------------- 593 (855)
Q Consensus 593 ------------------------------------------------~------------------------------- 593 (855)
+
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence 0
Q ss_pred ------------------------------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 003033 594 ------------------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643 (855)
Q Consensus 594 ------------------------------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~ 643 (855)
-.+||-||||+..+|.+++..+.... .-...++++.+|++||.|+|+
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~- 715 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHD- 715 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHh-
Confidence 01357899999888888875432211 345677899999999999999
Q ss_pred CCCCceecccccCceeeCCCCcEEEeecccc--------------------------------------------cc--C
Q 003033 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFL--------------------------------------------AS--G 677 (855)
Q Consensus 644 ~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------------------------------------------~~--~ 677 (855)
+|||||||||.||+||.++.+||+|||++ .. .
T Consensus 716 --~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 716 --QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred --CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 89999999999999999999999999621 11 2
Q ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 678 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 678 ~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
.|+.|+|+|||||||+||+. ||+-.-+....+. .++...-|...++.......-+.++.++++.||.+|||+ .+
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~--~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA-~e 867 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSMERASILT--NLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA-TE 867 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHHHHHHHH--hcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH-HH
Confidence 58889999999999999987 4653332222222 222221222233444455667889999999999999999 55
Q ss_pred HH
Q 003033 758 VW 759 (855)
Q Consensus 758 vl 759 (855)
+|
T Consensus 868 LL 869 (1351)
T KOG1035|consen 868 LL 869 (1351)
T ss_pred Hh
Confidence 53
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=252.14 Aligned_cols=195 Identities=25% Similarity=0.236 Sum_probs=156.5
Q ss_pred cCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCHHHHhcc
Q 003033 539 GGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSC 614 (855)
Q Consensus 539 G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL~~~L~~ 614 (855)
|.||.||++... +..||+|.+.... .+.+|...+....||||+++++++. +..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999875 5789999997543 3445666666678999999999874 468899999999999999853
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------------------
Q 003033 615 KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------------------- 674 (855)
Q Consensus 615 ~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------------------- 674 (855)
. ..+++.....++.|++.||.|||. ++|+||||||+|||++.++.++++|||..
T Consensus 79 ~---~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE 152 (237)
T cd05576 79 F---LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE 152 (237)
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence 2 358999999999999999999999 79999999999999999999999999732
Q ss_pred --ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCC
Q 003033 675 --ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 752 (855)
Q Consensus 675 --~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RP 752 (855)
....++.++|||||||++|+|++|++|+....... . .......|...+..+.+|+.+||+.||.+||
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---N--------THTTLNIPEWVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---c--------cccccCCcccCCHHHHHHHHHHccCCHHHhc
Confidence 12346778999999999999999998875322110 0 0011123334567899999999999999999
Q ss_pred ChH
Q 003033 753 ELG 755 (855)
Q Consensus 753 s~~ 755 (855)
++.
T Consensus 222 ~~~ 224 (237)
T cd05576 222 GAG 224 (237)
T ss_pred CCC
Confidence 973
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=274.66 Aligned_cols=217 Identities=19% Similarity=0.367 Sum_probs=166.7
Q ss_pred cceeeccCceEEEEEEEC--CeEEEEEEecCC----CCCChhhHHHHHHHHHhcCCCcceeEeceecC----ceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~----~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~~LV~Ey 602 (855)
...||+|+|-+||+|.+. |..||--.++.. .....+.|..|+.+|+.|+|||||++|.++.+ .+.+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 346999999999999876 445654333221 22235789999999999999999999998843 36689999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccccc------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEFLA------ 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~~~------ 675 (855)
+..|+|..|+... ..+.......|++||+.||.|||+..| +|||||||.+||+|+.+ |.+||+|+|++.
T Consensus 125 ~TSGtLr~Y~kk~---~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKH---RRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ccCCcHHHHHHHh---ccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 9999999998543 347788999999999999999999776 99999999999999765 999999998531
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
...|+..+||||||+.++||+|+..||.......+.+++- ... +.|. .+......++.+|
T Consensus 201 aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV-~SG-iKP~--sl~kV~dPevr~f 276 (632)
T KOG0584|consen 201 AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV-TSG-IKPA--ALSKVKDPEVREF 276 (632)
T ss_pred cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH-HcC-CCHH--HhhccCCHHHHHH
Confidence 2457889999999999999999999997555444333321 111 1110 0111223679999
Q ss_pred HHHhhccCCCCCCChHHHHH
Q 003033 740 AMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~~~evl 759 (855)
|.+|+.. ..+||++ .++|
T Consensus 277 IekCl~~-~~~R~sa-~eLL 294 (632)
T KOG0584|consen 277 IEKCLAT-KSERLSA-KELL 294 (632)
T ss_pred HHHHhcC-chhccCH-HHHh
Confidence 9999999 9999998 5553
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=251.45 Aligned_cols=218 Identities=23% Similarity=0.416 Sum_probs=173.6
Q ss_pred ccCCcccc-ceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceecC------c
Q 003033 526 ATHNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE------V 595 (855)
Q Consensus 526 ~~~~f~~~-~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~------~ 595 (855)
.+++|.+. .+||-|-.|.|-.+..+ +..+|+|++. +....++|+++.-.. .|||||.+++++.+ .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45667653 57999999999988776 4679999986 445678999987776 59999999998843 3
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC---CCCcEEEeecc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFE 672 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~~KL~DFg 672 (855)
+.+|||+|+||.|+..+..+ +...+++.....|+.||+.|+.|||+ .+|.||||||+|+|.. .|-.+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccc
Confidence 55799999999999999754 44679999999999999999999999 8999999999999995 45789999998
Q ss_pred cc------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH------HHHHHhhcccccccC
Q 003033 673 FL------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDTGKLKNLLD 722 (855)
Q Consensus 673 ~~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~------~~~~~~~~~~~~~~d 722 (855)
++ ....|+..+|+||+||++|-|++|.|||...+. +...+..|.+ .
T Consensus 210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy----~ 285 (400)
T KOG0604|consen 210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY----E 285 (400)
T ss_pred cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc----c
Confidence 54 234577789999999999999999999964332 2222222222 2
Q ss_pred CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 723 ~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
...++|. ..++...+++.++|..+|.+|-++ .++
T Consensus 286 FP~pEWs-~VSe~aKdlIR~LLkt~PteRlTI-~~~ 319 (400)
T KOG0604|consen 286 FPEPEWS-CVSEAAKDLIRKLLKTEPTERLTI-EEV 319 (400)
T ss_pred CCChhHh-HHHHHHHHHHHHHhcCCchhheeH-HHh
Confidence 2233454 457889999999999999999999 655
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=250.50 Aligned_cols=210 Identities=24% Similarity=0.394 Sum_probs=167.4
Q ss_pred ceeeccCceEEEEEE--ECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceecC--ceEEEEEecCCCCH
Q 003033 534 LKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE--VWTLVYEYLPNGSL 608 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~--~~~LV~Ey~~~GsL 608 (855)
..||+|+|+.|-.+. ..+..+|||++.+.......++.+|++++.+++ |+||+.|+.+|.+ .+|||||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 469999999998764 357889999999887777889999999999995 9999999999954 69999999999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC---CcEEEeecccc-----------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFEFL----------- 674 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~~KL~DFg~~----------- 674 (855)
..++..+ ..+++....++..+|+.||.|||. +||.||||||+|||.... .-+|||||.+.
T Consensus 164 LshI~~~---~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 164 LSHIQKR---KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHHh---hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 9988543 458899999999999999999999 899999999999998543 45899999311
Q ss_pred --------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-------------H----HH
Q 003033 675 --------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-------------Q----YA 711 (855)
Q Consensus 675 --------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-------------~----~~ 711 (855)
....|+.++|.||||||||-|++|.|||.+.-.. + ..
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 317 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHH
Confidence 1123678899999999999999999999532111 1 11
Q ss_pred HhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 712 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 712 ~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+..|++. -...+|- ..+.+..+|+...+-.|+.+|-++
T Consensus 318 IQEGkYe----FPdkdWa-hIS~eakdlisnLlvrda~~rlsa 355 (463)
T KOG0607|consen 318 IQEGKYE----FPDKDWA-HISSEAKDLISNLLVRDAKQRLSA 355 (463)
T ss_pred HhccCCc----CChhhhH-HhhHHHHHHHHHHHhccHHhhhhh
Confidence 1222221 1112332 456778999999999999999887
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=279.15 Aligned_cols=139 Identities=28% Similarity=0.410 Sum_probs=123.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|.+.++||+|+||.||+|.+. +..||||+++...... ...+..|+.++..++||||+++++++. +..||||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999987 6889999997643322 356889999999999999999998873 5689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
||+++|+|.+++.. ...+++...+.|+.||+.||.|||. ++||||||||+||||+.++.+||+|||
T Consensus 84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 99999999999853 2458889999999999999999999 799999999999999999999999996
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=256.58 Aligned_cols=214 Identities=22% Similarity=0.314 Sum_probs=174.0
Q ss_pred CCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCC---ChhhHHHHHHHHHhc-CCCcceeEecee--cCceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~~LV 599 (855)
.+|..+..||+|+||.|.++.-++ ..+|||+++++-.. +.+--..|-.+|.-. +-|.++.|..+| .+.+|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 478889999999999999998876 45999999876332 222234577777665 578888888877 4689999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc------
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------ 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------ 673 (855)
|||+.||+|.-++.+- ..+.+.....++.+|+-||-|||+ +|||.||||.+|||||.+|++||+|||+
T Consensus 429 MEyvnGGDLMyhiQQ~---GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV---GKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHh---cccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 9999999999888543 346677888999999999999999 8999999999999999999999999963
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+...+|+..+|+|||||+||||+.|+|||++.++...... +.+. .-.+|...+.
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~a------I~eh-nvsyPKslSk 575 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQA------IMEH-NVSYPKSLSK 575 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH------HHHc-cCcCcccccH
Confidence 3456788899999999999999999999998876543211 1111 1247888889
Q ss_pred HHHHHHHHhhccCCCCCCCh
Q 003033 735 QLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+...+....+...|.+|--.
T Consensus 576 EAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 576 EAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred HHHHHHHHHhhcCCccccCC
Confidence 99999999999999999643
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=268.86 Aligned_cols=230 Identities=27% Similarity=0.407 Sum_probs=188.9
Q ss_pred chhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEecee---
Q 003033 519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC--- 592 (855)
Q Consensus 519 ~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--- 592 (855)
.++-+...++.|++...||.|.||.||+++.+ ++.+|||++.... ...+++..|.+||+.+ .|||++.+||++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 34455667888999999999999999988654 6889999998764 3456788899999988 599999999987
Q ss_pred ----cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEE
Q 003033 593 ----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668 (855)
Q Consensus 593 ----~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL 668 (855)
.+.++||||||.+||..|++.... ...+.|..+..|+.+++.||.+||. +.+||||||-.||||+.++.+||
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEE
Confidence 467899999999999999996554 5679999999999999999999999 77999999999999999999999
Q ss_pred eeccccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc
Q 003033 669 SDFEFLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 718 (855)
Q Consensus 669 ~DFg~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~ 718 (855)
+|||+.. ...|+..+|+|||||+..||.-|.||+...+.+...+.+-.
T Consensus 165 vDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR-- 242 (953)
T KOG0587|consen 165 VDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-- 242 (953)
T ss_pred eeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC--
Confidence 9997421 23367789999999999999999999977776665443311
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+ +|....-|.....++.+++..||..|-.+||++ .++
T Consensus 243 N--PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~-~~l 279 (953)
T KOG0587|consen 243 N--PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPST-EEL 279 (953)
T ss_pred C--CCccccchhhHHHHHHHHHHHHHhhccccCcch-hhh
Confidence 1 111122344567899999999999999999998 444
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=266.24 Aligned_cols=213 Identities=26% Similarity=0.371 Sum_probs=169.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceecC--ceEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~--~~~LV~ 600 (855)
.+..|.....+|.|+|+.|-.+... +...++|++... ..+-.+|+.++... +||||+++.+.|.+ ..++||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 3567888888999999999988775 567899999765 23345688777776 69999999999965 578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee-CCCCcEEEeeccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-DANFVSKLSDFEF------ 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl-d~~~~~KL~DFg~------ 673 (855)
|++.||-|.+.+... +.....+..|+.+|+.|+.|||. +|||||||||+|||+ +..++++|+|||+
T Consensus 396 e~l~g~ell~ri~~~----~~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSK----PEFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hhccccHHHHHHHhc----chhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999888877432 22236777899999999999999 899999999999999 6899999999973
Q ss_pred ----------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 674 ----------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 674 ----------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
+....|+..|||||||++||+|++|+.||.....-...... + ..+.+....+....
T Consensus 469 ~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~-----i---~~~~~s~~vS~~AK 540 (612)
T KOG0603|consen 469 SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR-----I---QMPKFSECVSDEAK 540 (612)
T ss_pred hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh-----h---cCCccccccCHHHH
Confidence 23456899999999999999999999999644332111111 1 11222355678899
Q ss_pred HHHHHhhccCCCCCCChHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+|+.+||+.||.+||++ +++
T Consensus 541 dLl~~LL~~dP~~Rl~~-~~i 560 (612)
T KOG0603|consen 541 DLLQQLLQVDPALRLGA-DEI 560 (612)
T ss_pred HHHHHhccCChhhCcCh-hhh
Confidence 99999999999999999 554
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-28 Score=246.89 Aligned_cols=223 Identities=24% Similarity=0.421 Sum_probs=173.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC--CCCChhhHHHHHHHHHhcCCCcceeEeceec----------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP---------- 593 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---------- 593 (855)
..|....+||+|.||.||+++.+ ++.||+|++-.. .......-.+|+.+|..|+|+|++.++..|.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 46777889999999999999876 467898765432 2334566789999999999999999999882
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..+||||.+|+. +|.-+|.. ....++...+.+++.++..||.|+|. ..|+|||+||+|+||+.+|.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccc
Confidence 138899999965 89888853 33468888999999999999999999 7899999999999999999999999984
Q ss_pred c------------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 003033 674 L------------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 723 (855)
Q Consensus 674 ~------------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~ 723 (855)
. ....|+++.|||.-|||+.||+||.|.|.+..+.++......+-.-+.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t- 249 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT- 249 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC-
Confidence 3 334678899999999999999999999987776554332211100000
Q ss_pred CCCCCC------------------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 LAGDWP------------------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 ~~~~~p------------------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...|| .....+.++|+.+++.+||.+|++. ++++
T Consensus 250 -kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a-d~al 313 (376)
T KOG0669|consen 250 -KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA-DQAL 313 (376)
T ss_pred -cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch-Hhhh
Confidence 01121 1112368899999999999999998 6553
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=249.93 Aligned_cols=228 Identities=23% Similarity=0.364 Sum_probs=172.6
Q ss_pred CccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHh--cCCCcceeEeceec------CceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACP------EVWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~--l~HpnIV~l~g~~~------~~~~LV~ 600 (855)
.....+.||+|.||+||+|.|+|..||||++... +...+.+|.+|... |||+||+.++++-. ..++||.
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 4456778999999999999999999999999753 34567888888875 59999999998751 1478999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh------cCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS------CKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~------~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
+|-++|||+|+|.. ..++....++++.-+|.||++||. .+| .|.|||||..|||+..++.+-|+|+|++
T Consensus 289 dYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKP-aIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred ecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCc-hhhccccccccEEEccCCcEEEeeceee
Confidence 99999999999942 468899999999999999999995 344 6999999999999999999999999864
Q ss_pred cc------------------CCC-----------------CcchhHHHHHHHHHHHHhC----------CCCCCCc----
Q 003033 675 AS------------------GEL-----------------TPKSDVYSFGIILLRLLTG----------RPALGIT---- 705 (855)
Q Consensus 675 ~~------------------~~~-----------------t~ksDVwSfGvvl~elltG----------~~pf~~~---- 705 (855)
-. ..| -..+||||||.|+||++-. ++||...
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 21 111 0138999999999999763 4677422
Q ss_pred hHHHHHHhhcccccccCCCCCCCCh-hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 706 KEVQYALDTGKLKNLLDPLAGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 706 ~~~~~~~~~~~~~~~~d~~~~~~p~-~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+...+.-....+-+.....|.. .....+.+|+..||..||.-|-++ =.+-+.|..+
T Consensus 444 Ps~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA-LriKKtl~~l 503 (513)
T KOG2052|consen 444 PSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA-LRIKKTLAKL 503 (513)
T ss_pred CCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH-HHHHHHHHHH
Confidence 1122222222222222223344543 345689999999999999999987 4566666655
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=233.65 Aligned_cols=211 Identities=28% Similarity=0.382 Sum_probs=166.7
Q ss_pred CceEEEEEEECC--eEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCHHHHhcc
Q 003033 540 GYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSC 614 (855)
Q Consensus 540 ~fG~Vykg~~~~--~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL~~~L~~ 614 (855)
+||.||+|...+ ..+|+|++....... ...|.+|+.++++++|+||+++++.+. ...+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 689999999864 889999998765544 678999999999999999999999984 468899999999999999853
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------------------
Q 003033 615 KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------------- 675 (855)
Q Consensus 615 ~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------------- 675 (855)
. ..+++..+..++.+++.+|.|||. .+|+|+||+|.||+++.++.++|+|||...
T Consensus 81 ~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 81 R---GRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred c---cCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 2 238899999999999999999999 799999999999999999999999997421
Q ss_pred -----cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCC
Q 003033 676 -----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS 750 (855)
Q Consensus 676 -----~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~ 750 (855)
...++.++||||||+++|+|++|.+||............... ..... ...+ ...+..+.+++.+||..+|.+
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~i~~~l~~~p~~ 231 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK-PKPPF-PPPE-WKISPEAKDLIRKLLVKDPEK 231 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc-cCCCC-cccc-ccCCHHHHHHHHHHccCCchh
Confidence 234677899999999999999999999763222222211100 00000 0000 004578999999999999999
Q ss_pred CCChHHHHHH
Q 003033 751 RPELGKDVWR 760 (855)
Q Consensus 751 RPs~~~evl~ 760 (855)
||++ .++++
T Consensus 232 Rp~~-~~~~~ 240 (244)
T smart00220 232 RLTA-EEALQ 240 (244)
T ss_pred ccCH-HHHhh
Confidence 9999 66643
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-26 Score=248.29 Aligned_cols=228 Identities=27% Similarity=0.421 Sum_probs=171.7
Q ss_pred CCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHh--cCCCcceeEeceec------CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACP------EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~--l~HpnIV~l~g~~~------~~~~LV 599 (855)
........||+|.||.||||.+.++.||||++.. +....|+.|-+|.+- ++|+||++++++-. -.+.||
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3455667899999999999999999999999974 456679999998875 47999999998751 147799
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC------CCceecccccCceeeCCCCcEEEeeccc
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP------HSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~------~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
++|.++|+|.++|.. ..++|....+|+.-+++||+|||...| .+|+|||||..|||+..++++.|+|||+
T Consensus 287 t~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999953 368999999999999999999997443 3799999999999999999999999985
Q ss_pred cccC----------------C------------CC-----cchhHHHHHHHHHHHHhCCCCC--CCc-------------
Q 003033 674 LASG----------------E------------LT-----PKSDVYSFGIILLRLLTGRPAL--GIT------------- 705 (855)
Q Consensus 674 ~~~~----------------~------------~t-----~ksDVwSfGvvl~elltG~~pf--~~~------------- 705 (855)
+..- . +. .+.||||+|.|||||++.-+.+ +..
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 4210 1 11 2489999999999999974332 111
Q ss_pred ----hHHHHHHhhcccccccCCCCCCCChh-hHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 706 ----KEVQYALDTGKLKNLLDPLAGDWPFV-QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 706 ----~~~~~~~~~~~~~~~~d~~~~~~p~~-~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
++++..+...+.+.. ....|-.. ...-+.+.+..||+.||.-|-|+ .=|-+.+..+.
T Consensus 443 hPt~e~mq~~VV~kK~RP~---~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA-~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPK---IPDAWRKHAGMAVLCETIEECWDHDAEARLTA-GCVEERMAELM 504 (534)
T ss_pred CCCHHHHHHHHHhhccCCC---ChhhhhcCccHHHHHHHHHHHcCCchhhhhhh-HHHHHHHHHHh
Confidence 112222222111111 11223222 34678999999999999999998 66666555553
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-27 Score=257.21 Aligned_cols=214 Identities=22% Similarity=0.286 Sum_probs=175.5
Q ss_pred CccccceeeccCceEEEEEEECCeE--EEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~--VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~E 601 (855)
++..+..||-||||.|-....++.. +|+|++++.... ..+++..|-.||..++.|.||+||..|.+ ..|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3455667999999999988887654 799998875433 34568899999999999999999999955 5788999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
-|-||.|...|..+ +.++..+...|+..+.+|+.|||+ ++||+|||||+|+|||.+|.+||.|||++.
T Consensus 501 aClGGElWTiLrdR---g~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 501 ACLGGELWTILRDR---GSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hhcCchhhhhhhhc---CCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999999543 457778888899999999999999 899999999999999999999999998532
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
....+..+|.|||||++|||+||.|||.+.+.+...-..-+ -+|. -.||...+....
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk---Gid~--i~~Pr~I~k~a~ 649 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK---GIDK--IEFPRRITKTAT 649 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh---hhhh--hhcccccchhHH
Confidence 22345679999999999999999999998887653221111 1121 257878888999
Q ss_pred HHHHHhhccCCCCCCC
Q 003033 738 NLAMRCCEMSRKSRPE 753 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs 753 (855)
+|+.+.+..+|.+|--
T Consensus 650 ~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 650 DLIKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHHHhcCcHhhhc
Confidence 9999999999999976
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=245.17 Aligned_cols=233 Identities=24% Similarity=0.380 Sum_probs=188.2
Q ss_pred hhcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP- 593 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~- 593 (855)
+....++|...-.+-+|.||.||+|.|+. +.|-+|.++....+ ....|+.|--.|..+.|||+..+.|++.
T Consensus 279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 33344556677788999999999998763 34667777654322 2456889999999999999999999983
Q ss_pred --CceEEEEEecCCCCHHHHhc-----ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 594 --EVWTLVYEYLPNGSLEDRLS-----CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 594 --~~~~LV~Ey~~~GsL~~~L~-----~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
+..+++|.++.-|+|..+|. .......++..+...++.|++.|+.|||. ++|||.||...|++||+...+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqV 435 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQV 435 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeE
Confidence 35788999999999999996 23344567888899999999999999999 899999999999999999999
Q ss_pred EEeecc---------------------------ccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcc
Q 003033 667 KLSDFE---------------------------FLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGK 716 (855)
Q Consensus 667 KL~DFg---------------------------~~~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~ 716 (855)
||+|-. .+....|+..+|||||||+||||+| |+.|+...+..+ ..+..
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd-- 513 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD-- 513 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc--
Confidence 999952 2345668899999999999999998 899987665443 23333
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..+-..|..++.++..++.-||...|++||++ +++...|.+...
T Consensus 514 ------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf-~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 514 ------GYRLAQPFNCPDELFTVMACCWALLPEERPSF-SQLVICLSEFHT 557 (563)
T ss_pred ------cceecCCCCCcHHHHHHHHHHHhcCcccCCCH-HHHHHHHHHHHH
Confidence 33344678889999999999999999999999 889999887654
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-26 Score=229.99 Aligned_cols=236 Identities=22% Similarity=0.397 Sum_probs=177.5
Q ss_pred CCCCcccccchhhhh-cccCCccccceeeccCceEEEEEE--ECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcc
Q 003033 510 HMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNL 585 (855)
Q Consensus 510 ~~~~~~~~~~~~ei~-~~~~~f~~~~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnI 585 (855)
..+..+++|.-.-+. +..++|++.+++|+|.|+.||.|. ..+..++||++++- ..+.+.+|+.||..|+ ||||
T Consensus 19 ~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NI 95 (338)
T KOG0668|consen 19 ERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNI 95 (338)
T ss_pred cCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCe
Confidence 345556665443222 456789999999999999999997 44688999999864 3567899999999997 9999
Q ss_pred eeEeceecC----ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 586 VTLVGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 586 V~l~g~~~~----~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
++|++...+ ...||+||+.+.+...+. +.|+-..+..++.+++.||.|+|+ +||+|||+||.|+++|
T Consensus 96 i~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmId 166 (338)
T KOG0668|consen 96 IKLLDIVKDPESKTPSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMID 166 (338)
T ss_pred eehhhhhcCccccCchhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeec
Confidence 999998844 467999999998877655 357777888999999999999999 8999999999999998
Q ss_pred CC-CcEEEeeccccc-------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCC-CchHHHHHHhh
Q 003033 662 AN-FVSKLSDFEFLA-------------------------SGELTPKSDVYSFGIILLRLLTGRPALG-ITKEVQYALDT 714 (855)
Q Consensus 662 ~~-~~~KL~DFg~~~-------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~-~~~~~~~~~~~ 714 (855)
.. -.++|+|+|++. ...|+..-|+|||||+|..|+..+.||- +.+...+.+..
T Consensus 167 h~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkI 246 (338)
T KOG0668|consen 167 HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKI 246 (338)
T ss_pred hhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHH
Confidence 64 678999997431 2346778999999999999999998873 22222211111
Q ss_pred c-------------ccccccCC---------CCCCCCh--------hhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 715 G-------------KLKNLLDP---------LAGDWPF--------VQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 715 ~-------------~~~~~~d~---------~~~~~p~--------~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
. +..-.+|| ....|.. ..+++..+|+.+.|.+|..+|||+ ++.
T Consensus 247 akVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTa-kEa 319 (338)
T KOG0668|consen 247 AKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTA-KEA 319 (338)
T ss_pred HHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccch-HHH
Confidence 0 01111222 1223321 124788999999999999999998 544
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=258.57 Aligned_cols=230 Identities=20% Similarity=0.261 Sum_probs=161.0
Q ss_pred ccCCccccceeeccCceEEEEEEE------------------CCeEEEEEEecCCCCCChhh--------------HHHH
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLL------------------RHMQVAIKMLHPHSLQGPSE--------------FQQE 573 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~------------------~~~~VAvK~l~~~~~~~~~~--------------f~~E 573 (855)
..++|+..++||+|+||.||+|.+ .++.||||.+.......... +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 13569999987543322223 3457
Q ss_pred HHHHHhcCCCcc-----eeEeceec----------CceEEEEEecCCCCHHHHhcccCC---------------------
Q 003033 574 IDILSKIRHPNL-----VTLVGACP----------EVWTLVYEYLPNGSLEDRLSCKDN--------------------- 617 (855)
Q Consensus 574 i~iL~~l~HpnI-----V~l~g~~~----------~~~~LV~Ey~~~GsL~~~L~~~~~--------------------- 617 (855)
+.++.+++|.++ +.++|+|. +..+|||||+++|+|.++|.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876654 66777762 246899999999999999853211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc---------------------
Q 003033 618 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS--------------------- 676 (855)
Q Consensus 618 ~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~--------------------- 676 (855)
...++|..+..|+.|++.||.|||. .+|+||||||+|||++.++.+||+|||+...
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1235778889999999999999999 7899999999999999999999999985311
Q ss_pred CC-------------------------C--CcchhHHHHHHHHHHHHhCCC-CCCCchHHHHHHhh--cccc--cccCCC
Q 003033 677 GE-------------------------L--TPKSDVYSFGIILLRLLTGRP-ALGITKEVQYALDT--GKLK--NLLDPL 724 (855)
Q Consensus 677 ~~-------------------------~--t~ksDVwSfGvvl~elltG~~-pf~~~~~~~~~~~~--~~~~--~~~d~~ 724 (855)
.. + ..+.||||+||++|+|++|.. ||.........+.. .... ......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 00 0 123699999999999999974 76532222111111 0000 000001
Q ss_pred CCCCC--hhhHHHHHHHHHHhhccCC---CCCCChHHHHH
Q 003033 725 AGDWP--FVQAEQLANLAMRCCEMSR---KSRPELGKDVW 759 (855)
Q Consensus 725 ~~~~p--~~~~~~l~~L~~~Cl~~dP---~~RPs~~~evl 759 (855)
..+++ ........+|+.+++..+| .+|+++ ++++
T Consensus 460 ~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa-~eaL 498 (507)
T PLN03224 460 KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV-GQAL 498 (507)
T ss_pred CCCcccccccChHHHHHHHHHhccCCCCcccCCCH-HHHh
Confidence 11111 1245678999999999766 689999 5553
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=265.86 Aligned_cols=226 Identities=21% Similarity=0.249 Sum_probs=145.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEece--------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA-------- 591 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~-------- 591 (855)
..++|...++||+|+||.||+|.+. +..||||.+..... .+.+..| .+....+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999875 45799999864321 1111111 1222223333332221
Q ss_pred ecCceEEEEEecCCCCHHHHhcccCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccc
Q 003033 592 CPEVWTLVYEYLPNGSLEDRLSCKDNS-----------------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654 (855)
Q Consensus 592 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~-----------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLK 654 (855)
..+..+|||||+++|+|.+++...... .......+..|+.||+.||.|||+ ++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence 134578999999999999988533210 011223456799999999999999 799999999
Q ss_pred cCceeeCC-CCcEEEeeccccccC------------------------------------------------CCCcchhH
Q 003033 655 PANILLDA-NFVSKLSDFEFLASG------------------------------------------------ELTPKSDV 685 (855)
Q Consensus 655 p~NILld~-~~~~KL~DFg~~~~~------------------------------------------------~~t~ksDV 685 (855)
|+|||++. ++.+||+|||+.... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999985 689999999865310 12234599
Q ss_pred HHHHHHHHHHHhCCCCCCCchH-HHHHHhhcc-----cccccCCC-CCC----C--ChhhHHHHHHHHHHhhccCCCCCC
Q 003033 686 YSFGIILLRLLTGRPALGITKE-VQYALDTGK-----LKNLLDPL-AGD----W--PFVQAEQLANLAMRCCEMSRKSRP 752 (855)
Q Consensus 686 wSfGvvl~elltG~~pf~~~~~-~~~~~~~~~-----~~~~~d~~-~~~----~--p~~~~~~l~~L~~~Cl~~dP~~RP 752 (855)
|||||+||||+++..++..... ....+.... +.....+. ..+ + .........+|+.+||..||.+||
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ 442 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI 442 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence 9999999999997766532111 011111100 00111110 000 0 001123456899999999999999
Q ss_pred ChHHHHH
Q 003033 753 ELGKDVW 759 (855)
Q Consensus 753 s~~~evl 759 (855)
++ .+++
T Consensus 443 ta-~e~L 448 (566)
T PLN03225 443 SA-KAAL 448 (566)
T ss_pred CH-HHHh
Confidence 99 6654
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=246.03 Aligned_cols=212 Identities=26% Similarity=0.404 Sum_probs=171.9
Q ss_pred cceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecCCC
Q 003033 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG 606 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~G 606 (855)
.+.||.|.||+||-|+++ |+.||||++.+... ....++++|+.||.+++||.||.|-..| ++..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 457999999999999887 68999999987543 2346788999999999999999998887 57899999999554
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeecccc---------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEFL--------- 674 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~~--------- 674 (855)
-|+-.|... ...|+......++.||+.||.|||. ++|+|+||||+||||.. --.+||||||++
T Consensus 649 MLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR 723 (888)
T KOG4236|consen 649 MLEMILSSE--KGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR 723 (888)
T ss_pred HHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence 455555433 3468888888999999999999999 89999999999999954 357999999753
Q ss_pred ---------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHH
Q 003033 675 ---------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739 (855)
Q Consensus 675 ---------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L 739 (855)
....|+..-|+||.|||+|--++|..||....++...+....+.-. ..+|. +.+....+|
T Consensus 724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyP----p~PW~-eis~~Aidl 798 (888)
T KOG4236|consen 724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP----PNPWS-EISPEAIDL 798 (888)
T ss_pred hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccC----CCchh-hcCHHHHHH
Confidence 3456788899999999999999999999877777666655444321 12354 445678999
Q ss_pred HHHhhccCCCCCCCh
Q 003033 740 AMRCCEMSRKSRPEL 754 (855)
Q Consensus 740 ~~~Cl~~dP~~RPs~ 754 (855)
+...|+..-.+|.+.
T Consensus 799 In~LLqVkm~kRysv 813 (888)
T KOG4236|consen 799 INNLLQVKMRKRYSV 813 (888)
T ss_pred HHHHHHHHHHHhcch
Confidence 999999999999987
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=239.81 Aligned_cols=225 Identities=27% Similarity=0.386 Sum_probs=168.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC--C----cceeEecee--cCce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--P----NLVTLVGAC--PEVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H--p----nIV~l~g~~--~~~~ 596 (855)
+++|.+..++|+|.||.|-.+.++ +..||||+++.-. ...+.-+-|+++|.++.+ | -+|.+.++| .++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678999999999999999999877 4679999997532 234456679999999942 2 267777777 4678
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC--------------
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------------- 662 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-------------- 662 (855)
|||+|.+ |-|+.++|.. ++..+++...+..|+.|++.++.|||+ .+++|-||||+|||+.+
T Consensus 167 Civfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccc
Confidence 9999998 6699999963 355689999999999999999999999 78999999999999831
Q ss_pred ------CCcEEEeecc----------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH-HH-
Q 003033 663 ------NFVSKLSDFE----------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-AL- 712 (855)
Q Consensus 663 ------~~~~KL~DFg----------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~-~~- 712 (855)
+..+||+||| ++.+-.++.++||||+||||+||.||...|...+..+. ++
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMM 321 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMM 321 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHH
Confidence 3458999997 33455678899999999999999999988864431110 00
Q ss_pred hh--ccc----------ccccCCCCCCCC-------------------------hhhHHHHHHHHHHhhccCCCCCCChH
Q 003033 713 DT--GKL----------KNLLDPLAGDWP-------------------------FVQAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 713 ~~--~~~----------~~~~d~~~~~~p-------------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
+. |.+ ........-+|| ..+..+|.+|+.++|.+||.+|+|+
T Consensus 322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl- 400 (415)
T KOG0671|consen 322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL- 400 (415)
T ss_pred HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH-
Confidence 00 000 000000011222 1234579999999999999999999
Q ss_pred HHH
Q 003033 756 KDV 758 (855)
Q Consensus 756 ~ev 758 (855)
.++
T Consensus 401 ~EA 403 (415)
T KOG0671|consen 401 REA 403 (415)
T ss_pred HHH
Confidence 444
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=219.34 Aligned_cols=176 Identities=24% Similarity=0.323 Sum_probs=142.0
Q ss_pred ccCCccccceeeccCceEEEEEEE--CCeEEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEecee--cCceEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLV 599 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~~LV 599 (855)
..++...+..||+|+||.|-+-++ .|+..|+|.+...- .+..++.++|+++..+. .+|.+|.+||.. ....++.
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 344556677899999998865544 47889999998653 23456788899987665 699999999976 3467899
Q ss_pred EEecCCCCHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 600 YEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
||.| ..||..+... ......+++...-+|+..+..||.|||+. ..|||||+||+|||++.+|++|+||||+.
T Consensus 124 ME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 124 MELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 9999 4678765422 13445688899999999999999999985 67999999999999999999999999731
Q ss_pred ------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 003033 675 ------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGI 704 (855)
Q Consensus 675 ------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~ 704 (855)
....|+.++|||||||++.||.+++.||..
T Consensus 201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 223688899999999999999999999853
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=233.25 Aligned_cols=221 Identities=23% Similarity=0.311 Sum_probs=171.7
Q ss_pred cCCccccceeeccCceEEEEEEECC--eEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~L 598 (855)
.++|..+..||+|+|.+|..+.+.. ..+|+|++++.-. .+....+.|-.+..+. +||.+|-|..+|+ ..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 3578889999999999999988764 6799999987533 3345677888888877 6999999998884 36889
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc------
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE------ 672 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg------ 672 (855)
|.||++||+|.-++. ....|+......+..+|+.||.|||+ +|||.||||.+|+|||..|++||+|+|
T Consensus 329 vieyv~ggdlmfhmq---rqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehh---hhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999987774 33468999999999999999999999 899999999999999999999999996
Q ss_pred -------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-cccccccCCCCCCCChhh
Q 003033 673 -------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-GKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 673 -------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-~~~~~~~d~~~~~~p~~~ 732 (855)
++.+..|+..+|+|+|||+++||+.|+.||+........... ..+.+++-...-..|...
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 345667889999999999999999999999744311000000 001111111112345555
Q ss_pred HHHHHHHHHHhhccCCCCCCC
Q 003033 733 AEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs 753 (855)
+-....++...|..||++|--
T Consensus 483 svkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhcC
Confidence 566778888999999998854
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=211.66 Aligned_cols=181 Identities=38% Similarity=0.589 Sum_probs=157.1
Q ss_pred eeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEecCCCCHHH
Q 003033 536 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLED 610 (855)
Q Consensus 536 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey~~~GsL~~ 610 (855)
||.|+||.||++... +..+++|++...... ....+.+|+.++..++|++|+++++++.. ..+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999987 788999999865432 24679999999999999999999999854 7889999999999999
Q ss_pred HhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeeccccc--------------
Q 003033 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLA-------------- 675 (855)
Q Consensus 611 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~-------------- 675 (855)
++.... ..+++..+..++.+++.+|.|||. .+++|+||+|.||+++. ++.++|+|||...
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence 985322 468899999999999999999999 79999999999999999 8999999997432
Q ss_pred -----------cC-CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHh
Q 003033 676 -----------SG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743 (855)
Q Consensus 676 -----------~~-~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~C 743 (855)
.. .++.+.|+|+||+++++| ..+.+++.+|
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~~~~~l~~~ 197 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PELKDLIRKM 197 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HHHHHHHHHH
Confidence 11 455779999999999999 5688999999
Q ss_pred hccCCCCCCChHHHHHH
Q 003033 744 CEMSRKSRPELGKDVWR 760 (855)
Q Consensus 744 l~~dP~~RPs~~~evl~ 760 (855)
+..+|.+||++ .++++
T Consensus 198 l~~~p~~R~~~-~~l~~ 213 (215)
T cd00180 198 LQKDPEKRPSA-KEILE 213 (215)
T ss_pred hhCCcccCcCH-HHHhh
Confidence 99999999999 66654
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-25 Score=250.24 Aligned_cols=220 Identities=27% Similarity=0.371 Sum_probs=182.1
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~E 601 (855)
..++|+....+|.|+||.|||++.. +...|+|+++.....+..-+++|+-+++..+|||||.++|.+ .+.++++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 4468999999999999999999876 578999999987766777888999999999999999999998 457899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-------- 673 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-------- 673 (855)
||.+|+|.+..+ ...+|+..++..++++.+.||.|||+ .+-+|||||-+|||+++.|.+|++|||+
T Consensus 93 ycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred ecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhh
Confidence 999999999764 45689999999999999999999999 8899999999999999999999999973
Q ss_pred --------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccCCCCCCCChh
Q 003033 674 --------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 674 --------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~--~~~~~~~~~d~~~~~~p~~ 731 (855)
...+.|...+|||++|++..|+.--.||......++..+ ....+...-......|
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kw--- 243 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKW--- 243 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccc---
Confidence 234678889999999999999998888865444444322 2222221111122334
Q ss_pred hHHHHHHHHHHhhccCCCCCCChH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
.+.|.+|+..|+..+|++||+..
T Consensus 244 -s~~fh~fvK~altknpKkRptae 266 (829)
T KOG0576|consen 244 -SEFFHNFVKGALTKNPKKRPTAE 266 (829)
T ss_pred -hHHHHHHHHHHhcCCCccCCChh
Confidence 47799999999999999999973
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=208.73 Aligned_cols=170 Identities=36% Similarity=0.528 Sum_probs=146.7
Q ss_pred ccccceeeccCceEEEEEEECC--eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
|.....||.|+||.||+|...+ ..+|+|.+...... ....+.+|++.+.+++|+|++++++++. +..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566789999999999998864 88999999876544 5678899999999999999999999884 56889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--------- 675 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--------- 675 (855)
+++|.+++.... ..+++.....++.+++.+|.|||. .+++|+||+|.||+++.++.++|+|||+..
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 81 GGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 999999985322 128899999999999999999999 799999999999999999999999997321
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGI 704 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~ 704 (855)
...++.++|||+||+++|+|++|++||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 12345689999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-24 Score=245.91 Aligned_cols=216 Identities=28% Similarity=0.375 Sum_probs=160.5
Q ss_pred CccccceeeccCce-EEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecC
Q 003033 529 NFDPSLKIGEGGYG-SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 529 ~f~~~~~LG~G~fG-~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
-|...+.+|.|+-| .||+|.+.++.||||.+-... ..-.++||..|..- .|||||++|+.-. ...||..|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 45666778999988 569999999999999986432 33567999999988 5999999998764 3578999999
Q ss_pred CCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-----CCcEEEeeccccc---
Q 003033 605 NGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-----NFVSKLSDFEFLA--- 675 (855)
Q Consensus 605 ~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-----~~~~KL~DFg~~~--- 675 (855)
..+|.+++... .......-...+.+..|++.||++||+ .+||||||||.||||+. ...++|+|||+..
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 57999999642 100011112346778999999999999 68999999999999965 3678999997432
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...-+..+||||||||+|..++| ..||+..-..+..+..+...-..-....+|
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~- 741 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDC- 741 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchH-
Confidence 12234568999999999999996 899986665554444443221111111111
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+..+|+.+|++++|..||++ .+|
T Consensus 742 -----eA~dLI~~ml~~dP~~RPsa-~~V 764 (903)
T KOG1027|consen 742 -----EAKDLISRMLNPDPQLRPSA-TDV 764 (903)
T ss_pred -----HHHHHHHHhcCCCcccCCCH-HHH
Confidence 78899999999999999999 555
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.3e-24 Score=216.82 Aligned_cols=222 Identities=22% Similarity=0.331 Sum_probs=163.9
Q ss_pred CCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEece-e--cCceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA-C--PEVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~-~--~~~~~LV~E 601 (855)
+.|.+.+.||+|.||.+.++.+++ +.+++|.+.... ....+|.+|...--.| .|.||+.-|.. | .+.+..++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 468889999999999999999985 679999987542 3567899998876666 48999988764 4 345668999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee-C-CCCcEEEeecccccc---
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-D-ANFVSKLSDFEFLAS--- 676 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl-d-~~~~~KL~DFg~~~~--- 676 (855)
|+|.|+|..-+.. ..+.+..-.+++.|+++||.|+|+ +++||||||.+|||+ + +...+||||||....
T Consensus 103 ~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred cCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 9999999987732 347777888999999999999999 899999999999999 3 346899999984221
Q ss_pred ------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCch-----HHH-HHHhhcccccccCCCCC
Q 003033 677 ------------------------GELTPKSDVYSFGIILLRLLTGRPALGITK-----EVQ-YALDTGKLKNLLDPLAG 726 (855)
Q Consensus 677 ------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~-----~~~-~~~~~~~~~~~~d~~~~ 726 (855)
-...+.+|||.|||++|.++||++||.... .+. ..+..+......+
T Consensus 176 tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~---- 251 (378)
T KOG1345|consen 176 TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK---- 251 (378)
T ss_pred eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch----
Confidence 123567999999999999999999996221 111 1122222211111
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
. -...++.+..+..+-+..+|++|--. .++.++..
T Consensus 252 ~-F~~fs~~a~r~Fkk~lt~~~~drcki-~~~kk~rk 286 (378)
T KOG1345|consen 252 K-FNPFSEKALRLFKKSLTPRFKDRCKI-WTAKKMRK 286 (378)
T ss_pred h-hcccCHHHHHHHHHhcCCcccccchh-HHHHHHHH
Confidence 1 11235678888889999999998544 33433333
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-24 Score=218.35 Aligned_cols=223 Identities=21% Similarity=0.331 Sum_probs=166.4
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCC--CCCChhhHHHHHHHHHhcCCCcceeEeceec-------CceE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP-------EVWT 597 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------~~~~ 597 (855)
+.+..+.||-|+||.||...+. ++.||+|++..- .....+.+.+|+.+|.-++|.|++.++++.+ +..|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4566788999999999988764 688999988542 2224567899999999999999999988762 2357
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
++.|.|. .+|...+- ...+|+-....-++.||++||.|||+ .+|+||||||.|+|++.|..+||||||++
T Consensus 134 V~TELmQ-SDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHH-hhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccccc
Confidence 8888884 57887773 34568888888899999999999999 79999999999999999999999999843
Q ss_pred ------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----------------
Q 003033 675 ------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT---------------- 714 (855)
Q Consensus 675 ------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~---------------- 714 (855)
....|+...||||.|||+.||+..+-.|.....+++.-..
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 2345889999999999999999998888654443321110
Q ss_pred -cccccccCC--CCCCCC--------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 715 -GKLKNLLDP--LAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 715 -~~~~~~~d~--~~~~~p--------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
|.-..++.. ..+.++ .....+...+..+++..||..|.+. .+.+
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~-~~A~ 341 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISV-EEAL 341 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccH-hhhc
Confidence 111111111 111111 1223456778888999999999887 4443
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.6e-23 Score=224.92 Aligned_cols=174 Identities=23% Similarity=0.307 Sum_probs=146.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC------CcceeEecee--cCce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH------PNLVTLVGAC--PEVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H------pnIV~l~g~~--~~~~ 596 (855)
...|.+....|+|-|++|.+|... +..||||+|..+.. ..+.=+.|++||++|+. -|+++|+..| ..++
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 456777888999999999999875 57899999986532 23445689999999962 4788888766 5689
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeecc---
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFE--- 672 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg--- 672 (855)
|||+|-+ .-+|.+.|...+..-.|.......++.|+..||..|-. .+|+|.||||.|||++.. ..+||||||
T Consensus 510 ClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 510 CLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCcccc
Confidence 9999988 46899999877777778889999999999999999998 589999999999999864 678999997
Q ss_pred --------------------ccccCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Q 003033 673 --------------------FLASGELTPKSDVYSFGIILLRLLTGRPALGIT 705 (855)
Q Consensus 673 --------------------~~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~ 705 (855)
++.+..|+...|+||.||+||||.||+-.|.+.
T Consensus 586 ~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 586 FASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 345667899999999999999999999888643
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=226.33 Aligned_cols=170 Identities=24% Similarity=0.391 Sum_probs=142.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--------ChhhHHHHHHHHHhcC---CCcceeEeceecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------GPSEFQQEIDILSKIR---HPNLVTLVGACPE 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------~~~~f~~Ei~iL~~l~---HpnIV~l~g~~~~ 594 (855)
.+|..++.+|.|+||.|+.+.++ +..|+||.+.+...- ....+-.||+||..|+ |+||++++++|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35888999999999999999887 467999999765321 1223557999999998 9999999999954
Q ss_pred --ceEEEEEec-CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 595 --VWTLVYEYL-PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 595 --~~~LV~Ey~-~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
.+||+||-- ++-+|++++. ..+.+++.....|+.||+.|+.+||+ ++|||||||-+|+.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeec
Confidence 678999863 5568999984 44668999999999999999999999 89999999999999999999999999
Q ss_pred cc-----------------------cccCCC-CcchhHHHHHHHHHHHHhCCCCCC
Q 003033 672 EF-----------------------LASGEL-TPKSDVYSFGIILLRLLTGRPALG 703 (855)
Q Consensus 672 g~-----------------------~~~~~~-t~ksDVwSfGvvl~elltG~~pf~ 703 (855)
|- +.+..| +..-|||++||+||.++....||.
T Consensus 715 gsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 72 222222 456899999999999999988874
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=215.46 Aligned_cols=129 Identities=24% Similarity=0.357 Sum_probs=108.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-----C---CcceeEecee----
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----H---PNLVTLVGAC---- 592 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----H---pnIV~l~g~~---- 592 (855)
..+|-..++||.|.|++||++.+. .+.||+|+.+... ...+....||.+|++++ | .+||+|++.|
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 357889999999999999999886 4789999997532 34566788999999985 3 3699999998
Q ss_pred --cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 593 --~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
..+.|+|+|++ |-+|..++.. .+...++......|+.||+.||.|||.. .+|||-||||+||||
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~-s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKY-SNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHH-hCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 23689999999 7788888854 3445688999999999999999999986 489999999999999
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-22 Score=209.97 Aligned_cols=219 Identities=21% Similarity=0.294 Sum_probs=163.7
Q ss_pred CCccccceeeccCceEEEEEEE--CCeEEEEEEecCC--CCCChhhHHHHHHHHHhcCCCcceeEeceecC--------c
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--------V 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--------~ 595 (855)
.+|..+..+|.|.- .|..+.+ .+.+||+|.+... .....+...+|..++..+.|+||++++.+|.. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777788888887 5554433 3788999987543 22234567899999999999999999999831 4
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.|+||||| .++|...+. -.++-.+...|..|++.|+.|||+ .+|+||||||+||++..++.+||.|||++.
T Consensus 96 ~y~v~e~m-~~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVIL-----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhh-hhHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhc
Confidence 78999999 568888774 235667888999999999999999 899999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc-----------
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK----------- 716 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~----------- 716 (855)
+-.|...+||||+||++.||++|.-.|.+.+...+..+. |.
T Consensus 167 ~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~ 246 (369)
T KOG0665|consen 167 TEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQP 246 (369)
T ss_pred ccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhH
Confidence 223677899999999999999999888655443222111 00
Q ss_pred ----------------cccccCCCCCCCCh------hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 ----------------LKNLLDPLAGDWPF------VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ----------------~~~~~d~~~~~~p~------~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+...+. ...|+. .....+.+|+.+||-.||++|.+. +++|
T Consensus 247 ~~r~yv~~~~~y~~~~f~~~fp--D~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv-~daL 308 (369)
T KOG0665|consen 247 TVRNYVENRPQYQAISFSELFP--DSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISV-DDAL 308 (369)
T ss_pred HHHHHhhcChHhhccchhhhCC--cccccccccCCccchHHHHHHHHHhhccChhhcccH-HHHh
Confidence 000000 011221 234568899999999999999998 6553
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-21 Score=208.19 Aligned_cols=166 Identities=30% Similarity=0.445 Sum_probs=140.3
Q ss_pred cCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEecee--cCceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~L 598 (855)
.+.|....+||+|.|+.||++.+. ...||+|.+.... .+..+..|+++|..+. +.||+.+.+++ .+..++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i 112 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI 112 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence 345778889999999999999764 3679999998653 5677999999999995 89999999998 567899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccccc--
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEFLA-- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~~~-- 675 (855)
|+||++.....+++. .++...+..+++.+..||.++|. +|||||||||.|+|.+.. +.-.|.|||++.
T Consensus 113 vlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 113 VLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred EecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999999884 35678889999999999999999 899999999999999754 667899996211
Q ss_pred --------------------------------------------------------------------cCCCCcchhHHH
Q 003033 676 --------------------------------------------------------------------SGELTPKSDVYS 687 (855)
Q Consensus 676 --------------------------------------------------------------------~~~~t~ksDVwS 687 (855)
.+..++++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 112356799999
Q ss_pred HHHHHHHHHhCCCCCC
Q 003033 688 FGIILLRLLTGRPALG 703 (855)
Q Consensus 688 fGvvl~elltG~~pf~ 703 (855)
.|||++-+++++.||.
T Consensus 264 ~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFF 279 (418)
T ss_pred ccceeehhhccccccc
Confidence 9999999999999984
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-21 Score=234.95 Aligned_cols=166 Identities=16% Similarity=0.245 Sum_probs=120.6
Q ss_pred hcCC-CcceeEecee-------c--CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 003033 579 KIRH-PNLVTLVGAC-------P--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648 (855)
Q Consensus 579 ~l~H-pnIV~l~g~~-------~--~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~I 648 (855)
.++| +||+.++++| . +.+++++||+ +++|.++|.. ...++++..+..|+.||+.||.|||+ ++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHS---QGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 4556 6888888877 1 2456788987 6799999953 23569999999999999999999999 899
Q ss_pred eecccccCceeeCC-------------------CCcEEEeeccccc----------------------------------
Q 003033 649 VHGDLKPANILLDA-------------------NFVSKLSDFEFLA---------------------------------- 675 (855)
Q Consensus 649 vHrDLKp~NILld~-------------------~~~~KL~DFg~~~---------------------------------- 675 (855)
|||||||+||||+. ++.+||+|||+..
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4556777776421
Q ss_pred -------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCC
Q 003033 676 -------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 748 (855)
Q Consensus 676 -------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP 748 (855)
...|+.++|||||||+||||++|.+|+.........+... .+++ .+ .........++.+||..+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~----~~~~---~~-~~~~~~~~~~~~~~L~~~P 253 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR----VLPP---QI-LLNWPKEASFCLWLLHPEP 253 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHh----hcCh---hh-hhcCHHHHHHHHHhCCCCh
Confidence 2346788999999999999999999975332221111111 1111 11 1112346788899999999
Q ss_pred CCCCChHHHHH
Q 003033 749 KSRPELGKDVW 759 (855)
Q Consensus 749 ~~RPs~~~evl 759 (855)
.+||++ .+++
T Consensus 254 ~~Rps~-~eil 263 (793)
T PLN00181 254 SCRPSM-SELL 263 (793)
T ss_pred hhCcCh-HHHh
Confidence 999999 5554
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.2e-20 Score=203.44 Aligned_cols=139 Identities=19% Similarity=0.184 Sum_probs=111.3
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC---CeEEEEEEecCCCC-----CChhhHHHHHHHHHhcCCCccee-Eeceec
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVT-LVGACP 593 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~-----~~~~~f~~Ei~iL~~l~HpnIV~-l~g~~~ 593 (855)
+....++|.....||+|+||.||+|.+. +..||||++..... .....|.+|+.+|.+++|+|++. +++.
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445678999999999999999999874 46689998764311 12346899999999999999985 5443
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceeccc-ccCceeeCCCCcEEEeecc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL-KPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDL-Kp~NILld~~~~~KL~DFg 672 (855)
+..+|||||++|++|.... . .. ...++.+++.||.|||+ +||+|||| ||+|||++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~~----~---~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLAR----P---HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHhC----c---cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 4578999999999997321 1 11 14578899999999999 89999999 9999999999999999999
Q ss_pred cccc
Q 003033 673 FLAS 676 (855)
Q Consensus 673 ~~~~ 676 (855)
+...
T Consensus 158 lA~~ 161 (365)
T PRK09188 158 LASV 161 (365)
T ss_pred ccee
Confidence 7653
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-20 Score=193.85 Aligned_cols=156 Identities=16% Similarity=0.178 Sum_probs=126.6
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhh---------HHHHHHHHHhcCCCcceeEeceec----
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRHPNLVTLVGACP---- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~---------f~~Ei~iL~~l~HpnIV~l~g~~~---- 593 (855)
.++|...+.||.|+||.||.....+..+|||++++........ |.+|+..+.+++||+|..+..++.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 5689999999999999999977767789999998764433322 578999999999999998877642
Q ss_pred ------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 594 ------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 594 ------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
...+|||||++|.+|.++.. ++. ....+++.+|..||. .|++|||+||+|||++.+| ++
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-EE
Confidence 24789999999999988741 222 245689999999999 8999999999999999988 99
Q ss_pred Eeeccccc-------------cCCCCcchhHHHHHHHHHHHHh
Q 003033 668 LSDFEFLA-------------SGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 668 L~DFg~~~-------------~~~~t~ksDVwSfGvvl~ellt 697 (855)
|+|||... ...|+.++|+||||+++..+..
T Consensus 175 liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 175 IIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHHHH
Confidence 99998432 2346678999999998876543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-20 Score=190.59 Aligned_cols=228 Identities=24% Similarity=0.442 Sum_probs=181.2
Q ss_pred ccccceeeccCceEEEEEEECCeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~ 605 (855)
.....+|.+...|..|+|++.+..+++|+++..... -...|..|.-.|+-+.||||+.++|+| +..+.++..|||.
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 344567889999999999999999999998765332 246799999999999999999999999 4467889999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe--e--ccccccCC-C-
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS--D--FEFLASGE-L- 679 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~--D--Fg~~~~~~-~- 679 (855)
|+|+..|+.. ..-.++-.+..+++.+|+.|+.|||+..| -|..--|....+++|++.+++|+ | |.+...+. |
T Consensus 272 gslynvlhe~-t~vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~ 349 (448)
T KOG0195|consen 272 GSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYS 349 (448)
T ss_pred hHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheecccceeeeeccccccC
Confidence 9999999643 23346677889999999999999999864 24444789999999999988875 3 32221111 1
Q ss_pred -----------------CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHH
Q 003033 680 -----------------TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR 742 (855)
Q Consensus 680 -----------------t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~ 742 (855)
-..+|+|||.|+||||.|...||.....++..++. .+..++...|...+..+.+|+.-
T Consensus 350 pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-----aleglrv~ippgis~hm~klm~i 424 (448)
T KOG0195|consen 350 PAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-----ALEGLRVHIPPGISRHMNKLMNI 424 (448)
T ss_pred cccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-----hhccccccCCCCccHHHHHHHHH
Confidence 12589999999999999999999876665544332 23344555677778899999999
Q ss_pred hhccCCCCCCChHHHHHHHHhhh
Q 003033 743 CCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 743 Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
|+..||.+||.+ +.|+.+|+.+
T Consensus 425 cmnedpgkrpkf-dmivpilekm 446 (448)
T KOG0195|consen 425 CMNEDPGKRPKF-DMIVPILEKM 446 (448)
T ss_pred HhcCCCCcCCCc-ceehhhHHHh
Confidence 999999999999 8999999976
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-19 Score=176.85 Aligned_cols=145 Identities=22% Similarity=0.228 Sum_probs=106.5
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc------------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------------ 673 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------------ 673 (855)
|+|.+++... ..+++|..+..|+.||+.||.|||+ ++ ||+|||++.++.+|+ ||.
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~ 67 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVD 67 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccccCCCc
Confidence 7899999532 3469999999999999999999998 44 999999999999999 863
Q ss_pred --------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh--cccccccCCCCCCCChhhHH--HHHHHHH
Q 003033 674 --------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLDPLAGDWPFVQAE--QLANLAM 741 (855)
Q Consensus 674 --------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~--~~~~~~~d~~~~~~p~~~~~--~l~~L~~ 741 (855)
+....++.++|||||||++|||+||++||.........+.. ..... ..+.....+..... .+.+++.
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ 146 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA-DDPRDRSNLESVSAARSFADFMR 146 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc-CCccccccHHHHHhhhhHHHHHH
Confidence 23456788999999999999999999999654332211111 00000 11111111222333 6999999
Q ss_pred HhhccCCCCCCChHHHHHHHHhhh
Q 003033 742 RCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+||..+|.+||++ .+++..+..+
T Consensus 147 ~cl~~~p~~Rp~~-~~ll~~~~~~ 169 (176)
T smart00750 147 VCASRLPQRREAA-NHYLAHCRAL 169 (176)
T ss_pred HHHhcccccccCH-HHHHHHHHHH
Confidence 9999999999999 7787776654
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-19 Score=182.90 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=105.2
Q ss_pred ceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC---------hhhH-----------------HHHHHHHHhcCCCcce
Q 003033 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG---------PSEF-----------------QQEIDILSKIRHPNLV 586 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~---------~~~f-----------------~~Ei~iL~~l~HpnIV 586 (855)
..||+|+||.||+|... +..||||+++...... ...| .+|+.+|.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 46999999999999875 7899999997653211 1122 3499999999877764
Q ss_pred eEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCCceecccccCceeeCCCCc
Q 003033 587 TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL-HSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 587 ~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
..........+|||||+++++|...+. ...++++.....++.|++.+|.|| |+ .+|+||||||+|||++ ++.
T Consensus 83 ~p~~~~~~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 83 CPEPILLKSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCcEEEecCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-CCc
Confidence 333222233489999999887765432 124688899999999999999999 67 6999999999999998 478
Q ss_pred EEEeecccccc
Q 003033 666 SKLSDFEFLAS 676 (855)
Q Consensus 666 ~KL~DFg~~~~ 676 (855)
++|+|||++..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999998763
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=175.12 Aligned_cols=227 Identities=33% Similarity=0.457 Sum_probs=170.7
Q ss_pred ccccceeeccCceEEEEEEECCeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCC-cceeEeceecC--ceEEEEEec
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHP-NLVTLVGACPE--VWTLVYEYL 603 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~Hp-nIV~l~g~~~~--~~~LV~Ey~ 603 (855)
|.....||.|+||.||++... ..+++|.+....... ...|.+|+.++..+.|+ +|+++++.+.. ..+++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 566778999999999999887 789999998764433 56799999999999988 79999988843 358999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeeccccc-------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFLA------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~~------- 675 (855)
.+++|.+++........++......++.+++.+|.|+|. .+++|||+||+|||++..+ .++++|||...
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 999999776422111268888999999999999999999 7899999999999999988 79999998321
Q ss_pred ------------------------c---CCCCcchhHHHHHHHHHHHHhCCCCCCCchH---HHH---HHhhcccccccC
Q 003033 676 ------------------------S---GELTPKSDVYSFGIILLRLLTGRPALGITKE---VQY---ALDTGKLKNLLD 722 (855)
Q Consensus 676 ------------------------~---~~~t~ksDVwSfGvvl~elltG~~pf~~~~~---~~~---~~~~~~~~~~~d 722 (855)
. ..++...|+||+|++++++++|..||..... ... .+..........
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 1 2456679999999999999999999865542 111 111111100011
Q ss_pred CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 723 ~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
......+......+.+++.+|+..+|..|.+....+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111111223578899999999999999998554443
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=182.39 Aligned_cols=230 Identities=24% Similarity=0.315 Sum_probs=171.6
Q ss_pred CccccceeeccCceEEEEEEECC---eEEEEEEecCCCCCChhhHHHHHHHHHhcCC----CcceeEecee---cCceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHSLQGPSEFQQEIDILSKIRH----PNLVTLVGAC---PEVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H----pnIV~l~g~~---~~~~~L 598 (855)
+|.+..+||+|+||.||.+.... ..+|+|............+..|+.+|..+.. +++..+++.. ....++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999998764 3689998876543333378899999999973 5788887766 235689
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-----CcEEEeeccc
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-----FVSKLSDFEF 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-----~~~KL~DFg~ 673 (855)
||+.+ |.+|.++..... ...++..+.++|+.|++.+|.+||+ .|+|||||||+|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999874433 4679999999999999999999999 899999999999999754 4689999987
Q ss_pred cc--c---------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcc
Q 003033 674 LA--S---------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGK 716 (855)
Q Consensus 674 ~~--~---------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~ 716 (855)
.. . ...+.+-|+||++.++.+++.|..||...... ...+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 64 1 01234679999999999999999998543321 11111111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
....... .....+..+..+...+-..+...+|+. ..+...|..+...
T Consensus 254 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy-~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDY-EKLAELLKDVFDS 300 (322)
T ss_pred hhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCH-HHHHHHHHHHHHh
Confidence 1111111 122334667778777778999999999 7787777766443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=5e-18 Score=173.75 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=107.5
Q ss_pred cceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC--------------------------hhhHHHHHHHHHhcCCCcc
Q 003033 533 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--------------------------PSEFQQEIDILSKIRHPNL 585 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--------------------------~~~f~~Ei~iL~~l~HpnI 585 (855)
...||+|+||.||+|... +..||||++++..... ...+.+|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 357999999999999875 7899999998753210 1123579999999999987
Q ss_pred eeEeceecCceEEEEEecCCCCHHHH-hcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC
Q 003033 586 VTLVGACPEVWTLVYEYLPNGSLEDR-LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664 (855)
Q Consensus 586 V~l~g~~~~~~~LV~Ey~~~GsL~~~-L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 664 (855)
.....+.....+|||||++++++... +. ...++......++.+++.+|.+||+. .||+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLKKNVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEecCCEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE-CC
Confidence 54433332345899999998865433 32 23467788899999999999999973 4899999999999999 89
Q ss_pred cEEEeeccccccC
Q 003033 665 VSKLSDFEFLASG 677 (855)
Q Consensus 665 ~~KL~DFg~~~~~ 677 (855)
.++|+|||++...
T Consensus 155 ~~~liDFG~a~~~ 167 (190)
T cd05145 155 KPYIIDVSQAVEL 167 (190)
T ss_pred CEEEEEcccceec
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-17 Score=173.88 Aligned_cols=133 Identities=17% Similarity=0.246 Sum_probs=103.3
Q ss_pred ccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhc-----CCCcceeEeceecCc------eEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-----RHPNLVTLVGACPEV------WTL 598 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-----~HpnIV~l~g~~~~~------~~L 598 (855)
+.....||+|+||.||.....+. .+||++..........+.+|+.+++.+ .||||++++|++... +.+
T Consensus 4 L~~~~~LG~G~~~~Vy~hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYAHPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cCCcceecCCCceEEEECCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 34457899999999996221223 479998776555567899999999999 579999999998442 227
Q ss_pred EEEe--cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCCceecccccCceeeCC----CCcEEEeec
Q 003033 599 VYEY--LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL-IFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDF 671 (855)
Q Consensus 599 V~Ey--~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL-~yLH~~~~~~IvHrDLKp~NILld~----~~~~KL~DF 671 (855)
|+|| +++|+|.+++... .+++. ..++.+++.++ .|||+ ++||||||||+|||++. ++.++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 6689999999432 25554 35677888787 89999 89999999999999974 348999995
Q ss_pred c
Q 003033 672 E 672 (855)
Q Consensus 672 g 672 (855)
+
T Consensus 154 ~ 154 (210)
T PRK10345 154 I 154 (210)
T ss_pred C
Confidence 3
|
|
| >cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.9e-17 Score=157.18 Aligned_cols=144 Identities=36% Similarity=0.599 Sum_probs=123.3
Q ss_pred eEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 46 KIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (855)
Q Consensus 46 ~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~~ 123 (855)
+|.||||.+ ..|..||.||++.+. +..+.||||.++....+...+ ..+....+.+..+++.+++|..+..
T Consensus 1 ~ILVavD~S-~~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~ 72 (146)
T cd01989 1 SVAVAVDKD-KKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSG-------KLEVASAYKQEEDKEAKELLLPYRC 72 (146)
T ss_pred CEEEEecCc-cccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCcc-------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488999999 999999999999874 788999999877544332211 1133456677778889999999999
Q ss_pred HHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEecC
Q 003033 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199 (855)
Q Consensus 124 ~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~kg 199 (855)
.|...+++++.+++++++++++|++++.+++++.||||+..++.+.+.+.+ +.++.+|.+++|++|+|++|++|
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~g--ssva~~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 73 FCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFKK--SDVASSVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred HHhhcCCeEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecccC--CchhHHHHhcCCCCceEEEEeCc
Confidence 999999999999999999999999999999999999999999888777654 56999999999999999999998
|
The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding. |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.9e-17 Score=166.68 Aligned_cols=132 Identities=25% Similarity=0.365 Sum_probs=109.9
Q ss_pred ceeeccCceEEEEEEECCeEEEEEEecCCCCCC--------hhhHHHHHHHHHhcCCCcceeEece--ecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNLVTLVGA--CPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l~HpnIV~l~g~--~~~~~~LV~Ey~ 603 (855)
..||+|++|.||+|.+.+..|+||+........ ...+.+|+.++..++|++|+....+ ..+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 469999999999999988999999876543321 1357789999999999988665444 456788999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
+|++|.+++... .+ .+..++.+++.+|.+||. .+++|||++|.|||++ ++.++|+|||....
T Consensus 82 ~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSN------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999988421 12 778899999999999999 7999999999999999 78899999997654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.1e-17 Score=165.73 Aligned_cols=158 Identities=18% Similarity=0.138 Sum_probs=122.5
Q ss_pred cccceeeccCceEEEEEEECCeEEEEEEecCCCCCC----hhhHHHHHHHHHhcC-CCcceeEeceecCceEEEEEecCC
Q 003033 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG----PSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYLPN 605 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~----~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~~~~LV~Ey~~~ 605 (855)
.....||.|+||+||.+...+.+++.+.+.....-. ...|.+|+++|.+|. |++++.++++ +..+++|||+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence 345679999999999877777888888776543211 125789999999995 5889999886 456899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceeccc-ccCceeeCCCCcEEEeecccccc--------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL-KPANILLDANFVSKLSDFEFLAS-------- 676 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDL-Kp~NILld~~~~~KL~DFg~~~~-------- 676 (855)
.+|...+.. ....++.+++.+|.++|. +||+|||| ||+|||++.++.++|+|||++..
T Consensus 83 ~~L~~~~~~----------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 83 AAMYQRPPR----------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ccHHhhhhh----------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 998764410 113467899999999999 89999999 79999999999999999985431
Q ss_pred --------------------CCCC------------cchhHHHHHHHHHHHHhCCCCCC
Q 003033 677 --------------------GELT------------PKSDVYSFGIILLRLLTGRPALG 703 (855)
Q Consensus 677 --------------------~~~t------------~ksDVwSfGvvl~elltG~~pf~ 703 (855)
+.++ ...++++-|+-+|.++||+.++.
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 1111 23578899999999999987763
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-16 Score=160.37 Aligned_cols=128 Identities=27% Similarity=0.355 Sum_probs=104.8
Q ss_pred eeeccCceEEEEEEECCeEEEEEEecCCCCCC--------hhhHHHHHHHHHhcCCCcc--eeEeceecCceEEEEEecC
Q 003033 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNL--VTLVGACPEVWTLVYEYLP 604 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l~HpnI--V~l~g~~~~~~~LV~Ey~~ 604 (855)
.||+|+||.||+|.+.+..|++|......... ...+.+|+.++..++|+++ ..+++...+..++||||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 38999999999999989999999976543211 2456789999999988764 4455555667789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
|++|.+++.... ..++.+++.+|.+||. .+++|||++|.|||++ ++.+++.|||....
T Consensus 81 g~~l~~~~~~~~----------~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEGN----------DELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhcH----------HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999874211 0788999999999999 8999999999999999 89999999997654
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.2e-16 Score=162.65 Aligned_cols=228 Identities=20% Similarity=0.293 Sum_probs=164.5
Q ss_pred cccCCccccceeeccCceEEEEEE--ECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEece--ecCceEEE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGA--CPEVWTLV 599 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~--~~~~~~LV 599 (855)
...-+|.+.++||+|.||..|.|+ +.+.+||||.-...+ ..-++..|....+.|. .+.|...|.+ |.-+..||
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 345589999999999999999995 468999999865432 3346778888888885 5778766544 44456699
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-----CcEEEeecccc
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-----FVSKLSDFEFL 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-----~~~KL~DFg~~ 674 (855)
+|.+ |.||+|++.-.+ ..++..+...||.|++.-+.|+|. +.+|.|||||+|+||... ..+.|+|||++
T Consensus 103 idLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9998 889999874332 358899999999999999999999 789999999999999643 46899999854
Q ss_pred c--------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH---HHHhhccccc
Q 003033 675 A--------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ---YALDTGKLKN 719 (855)
Q Consensus 675 ~--------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~---~~~~~~~~~~ 719 (855)
. +.+.+.+-|.=|||-++...|-|..||.+..... ..-++|.-..
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr 256 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR 256 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence 2 1223456899999999999999999997654321 1112222111
Q ss_pred --ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 720 --LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 720 --~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+..+...+| .+++.-+.-.-.++-.+-|+. +-+...+..+
T Consensus 257 ~T~i~~Lc~g~P----~efa~Yl~yvR~L~F~E~PDY-dylr~Lf~dv 299 (449)
T KOG1165|consen 257 STPIEVLCEGFP----EEFATYLRYVRRLDFFETPDY-DYLRKLFDDV 299 (449)
T ss_pred cCCHHHHHhcCH----HHHHHHHHHHHhcCcccCCCH-HHHHHHHHHH
Confidence 1111223333 566666666666788888997 5555555544
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.7e-16 Score=164.18 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=107.6
Q ss_pred CccccceeeccCceEEEEEE-E--CCeEEEEEEecCCCCCC------------------------hhhHHHHHHHHHhcC
Q 003033 529 NFDPSLKIGEGGYGSIYKGL-L--RHMQVAIKMLHPHSLQG------------------------PSEFQQEIDILSKIR 581 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~-~--~~~~VAvK~l~~~~~~~------------------------~~~f~~Ei~iL~~l~ 581 (855)
.|.+...||+|+||.||+|. . .+..||||+++...... ...+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777889999999999998 2 47899999997643110 012568999999997
Q ss_pred CC--cceeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-ceecccccCce
Q 003033 582 HP--NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKPANI 658 (855)
Q Consensus 582 Hp--nIV~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~-IvHrDLKp~NI 658 (855)
+. .+..+++. ...+|||||+++++|...+. ....+.......++.+|+.+|.+||. ++ |+||||||+||
T Consensus 109 ~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe--cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhE
Confidence 53 34455543 23579999999988876542 12345555677899999999999999 78 99999999999
Q ss_pred eeCCCCcEEEeecccccc
Q 003033 659 LLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 659 Lld~~~~~KL~DFg~~~~ 676 (855)
|++ ++.++|+|||.+..
T Consensus 181 li~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEE-CCCEEEEEChhhhc
Confidence 999 88999999997653
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.5e-16 Score=155.93 Aligned_cols=216 Identities=21% Similarity=0.325 Sum_probs=161.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC-CcceeEecee--cCceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H-pnIV~l~g~~--~~~~~LV~E 601 (855)
..+|..+++||.|+||.+|.|..- +..||||+-.... ...++..|..+...|+| ..|..+..+. .+...|||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 467999999999999999999754 7899999976543 23467789999999975 4454554444 345679999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeecccccc--
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEFLAS-- 676 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~~~~-- 676 (855)
.+ |.||++++.-.. ..++..+.+-++-|++.-++|+|. +++|||||||+|+|..- ...+.|+|||+...
T Consensus 92 LL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 98 889999884322 348889999999999999999999 89999999999999853 35678999985321
Q ss_pred ------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH-----Hhhccccccc
Q 003033 677 ------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA-----LDTGKLKNLL 721 (855)
Q Consensus 677 ------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~-----~~~~~~~~~~ 721 (855)
.+.+.+-|+=|+|.+|..+.-|..||.+....... +...++...+
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 11234579999999999999999999765443222 2222233223
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..+...+| .++...+.-|-...-.+-|+.
T Consensus 246 e~LC~G~P----~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 246 EVLCKGFP----AEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHHhCCCc----HHHHHHHHHHhhcCCCCCCcH
Confidence 33334444 567788889999999999987
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.2e-16 Score=181.39 Aligned_cols=139 Identities=27% Similarity=0.322 Sum_probs=112.1
Q ss_pred hcccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCC--------ChhhHHHHHHHHHhcCCCcceeEecee--c
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--------GPSEFQQEIDILSKIRHPNLVTLVGAC--P 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--------~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~ 593 (855)
......|...++||+|+||.||+|.+.+..+++|+....... ....+.+|+.++..++|++++..+.++ .
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 334455677889999999999999988776666654322111 124588999999999999998765554 4
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
+..++||||+++++|.+++. ....++.+++.+|.|||+ .+|+||||||+|||+ .++.++|+|||+
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGl 473 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGL 473 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcc
Confidence 46789999999999999883 356789999999999999 899999999999999 578899999998
Q ss_pred cccC
Q 003033 674 LASG 677 (855)
Q Consensus 674 ~~~~ 677 (855)
....
T Consensus 474 a~~~ 477 (535)
T PRK09605 474 GKYS 477 (535)
T ss_pred cccC
Confidence 7653
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=183.49 Aligned_cols=221 Identities=23% Similarity=0.334 Sum_probs=155.7
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc----ceeEec--eecC
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN----LVTLVG--ACPE 594 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn----IV~l~g--~~~~ 594 (855)
+++.....|.+.+.||+|+||.||+|... ++.||+|+-++...- +|.-=.+++.+|+ |- |..+.. .+.+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLK-PQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhc-hhhhcchHHHHHHHccCC
Confidence 34455667899999999999999999765 688999998775432 3333445666666 32 233322 2367
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-------CCCcEE
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-------ANFVSK 667 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-------~~~~~K 667 (855)
..+||+||.+-|+|.+++. ....++|.....++.|++..+..||. .+|||+||||+|+||. .+..++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceE
Confidence 7889999999999999994 56679999999999999999999999 7899999999999993 245689
Q ss_pred Eeeccc---------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 003033 668 LSDFEF---------------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 720 (855)
Q Consensus 668 L~DFg~---------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~ 720 (855)
|+|||. ..+..++..+|.|.|.-+++-||.|+.- + +..|....+
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~-------q--~~~g~~~~~ 912 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM-------E--VKNGSSWMV 912 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH-------H--hcCCcceec
Confidence 999972 3456788899999999999999999622 1 222322222
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.......|-.+.-. ++...+|..|-..=|.+ .++...++.+
T Consensus 913 ~~~~~Ry~~~~~W~---~~F~~lLN~~~~~~p~l-~~lr~~~~~~ 953 (974)
T KOG1166|consen 913 KTNFPRYWKRDMWN---KFFDLLLNPDCDTLPNL-QELRTELEEV 953 (974)
T ss_pred cccchhhhhHHHHH---HHHHHHhCcCcccchhH-HHHHHHHHHH
Confidence 21122233333333 44445555554445666 5565555554
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.4e-16 Score=175.52 Aligned_cols=182 Identities=29% Similarity=0.461 Sum_probs=138.9
Q ss_pred HHhcCCCcceeEecee--cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCc-eeccc
Q 003033 577 LSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI-VHGDL 653 (855)
Q Consensus 577 L~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~I-vHrDL 653 (855)
|+.+.|.|+.+++|.| ....++|.+||..|+|.|.+.. ....++|.....++++|+.||.|||.. +| .|+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 4568899999999998 4467889999999999999964 345799999999999999999999984 33 99999
Q ss_pred ccCceeeCCCCcEEEeecccccc------------------------------C----CCCcchhHHHHHHHHHHHHhCC
Q 003033 654 KPANILLDANFVSKLSDFEFLAS------------------------------G----ELTPKSDVYSFGIILLRLLTGR 699 (855)
Q Consensus 654 Kp~NILld~~~~~KL~DFg~~~~------------------------------~----~~t~ksDVwSfGvvl~elltG~ 699 (855)
++.|+++|..+.+||+|||+-.- . ..+.+.||||||++++|+++..
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999973211 1 1466799999999999999999
Q ss_pred CCCCCchH------HHHHHhhcccccccCCCCCCCCh-hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 700 PALGITKE------VQYALDTGKLKNLLDPLAGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 700 ~pf~~~~~------~~~~~~~~~~~~~~d~~~~~~p~-~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.||+.... .-..+..+ ....+.|.. +.. ...+.+..++..||..+|..||++ +.|-..++.+..
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~-~~~~~rP~i--~~~~e~~~~l~~l~~~cw~e~P~~rPs~-~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKG-GSNPFRPSI--ELLNELPPELLLLVARCWEEIPEKRPSI-EQIRSKLLTINK 226 (484)
T ss_pred CccccccccCChHHHHHHHHhc-CCCCcCcch--hhhhhcchHHHHHHHHhcccChhhCccH-HHHHhhhhhhcc
Confidence 99975321 11111220 111222211 111 333479999999999999999999 777777666533
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-16 Score=187.61 Aligned_cols=218 Identities=24% Similarity=0.353 Sum_probs=161.2
Q ss_pred CccccceeeccCceEEEEEEECCeEEEEEEecCCC-CCChhhHHHHHHH--HHhcCCCcceeEecee--cCceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS-LQGPSEFQQEIDI--LSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~-~~~~~~f~~Ei~i--L~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
.|...+-||.+.|=+|.+|+++...|+||++-+.. .-....|.+++.- ..-++|||.+.+.-+- ....|||=+|+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 46667789999999999999987779999986654 3345556554433 4445899999876553 23467888888
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc-----------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE----------- 672 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg----------- 672 (855)
. -+|+|.|. ..+-|..-...-|+.|++.||.-+|. .||+|+|||.+||||+.=.-+.|+||.
T Consensus 104 k-hnLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 104 K-HNLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred h-hhhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 4 58999994 33557777888899999999999999 899999999999999987778899982
Q ss_pred ----------------c---------------cccCC-CCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcc---
Q 003033 673 ----------------F---------------LASGE-LTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGK--- 716 (855)
Q Consensus 673 ----------------~---------------~~~~~-~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~--- 716 (855)
| ..... ++++.||||+||++.||++ |+|||.+..-. ++..+.
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~--aYr~~~~~~ 254 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL--AYRSGNADD 254 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH--hHhccCccC
Confidence 0 11122 6889999999999999988 79999654332 222221
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
....+... +...+.+|++.|++.||.+|-++ ++.|+.-.
T Consensus 255 ~e~~Le~I-------ed~~~Rnlil~Mi~rdPs~RlSA-edyL~~yr 293 (1431)
T KOG1240|consen 255 PEQLLEKI-------EDVSLRNLILSMIQRDPSKRLSA-EDYLQKYR 293 (1431)
T ss_pred HHHHHHhC-------cCccHHHHHHHHHccCchhccCH-HHHHHhhh
Confidence 01111111 12358999999999999999999 77766543
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-15 Score=155.12 Aligned_cols=137 Identities=20% Similarity=0.207 Sum_probs=106.9
Q ss_pred CccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC----------------------ChhhHHHHHHHHHhcCCC--
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ----------------------GPSEFQQEIDILSKIRHP-- 583 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~----------------------~~~~f~~Ei~iL~~l~Hp-- 583 (855)
.|...+.||.|+||.||++... +..||||+++..... ....+.+|+.++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4666788999999999999875 789999997653210 011356799999999887
Q ss_pred cceeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC
Q 003033 584 NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663 (855)
Q Consensus 584 nIV~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 663 (855)
.+...++. ...++||||+++++|..+... .....++.+++.++.++|. .+|+||||||+|||++.+
T Consensus 96 ~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 96 PVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcCC
Confidence 44455543 345899999999998775420 2345688899999999999 799999999999999999
Q ss_pred CcEEEeeccccccCCC
Q 003033 664 FVSKLSDFEFLASGEL 679 (855)
Q Consensus 664 ~~~KL~DFg~~~~~~~ 679 (855)
+.++|+|||......+
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 9999999998754443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-16 Score=185.77 Aligned_cols=220 Identities=22% Similarity=0.303 Sum_probs=149.7
Q ss_pred ccceeeccCceEEEEEEEC--CeEEEEEEecCC--CCCCh----hhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEE
Q 003033 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGP----SEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 601 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~----~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~E 601 (855)
....+|.|+||.|+..... ....+.|..... ..... ..+..|+.+-..+.|||++..+..+.+ ...-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4567999999977766443 233333333210 11111 125568888888999999887766633 2233499
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
||++ +|..++... ..+....+..++.|++.|+.|||. .||.||||||+|+|+..+|.+||+|||..
T Consensus 402 ~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 999998532 346677888899999999999999 89999999999999999999999999621
Q ss_pred ----------------------ccCCCCc-chhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC--
Q 003033 675 ----------------------ASGELTP-KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP-- 729 (855)
Q Consensus 675 ----------------------~~~~~t~-ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p-- 729 (855)
....|.+ ..||||.||++..|++|+.||.........+.............+.++
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLL 554 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHH
Confidence 1222332 489999999999999999999644322111000000000000111111
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.....++.++|++||.+|-++ ++|+
T Consensus 555 ~~lp~~~~~~~~~~l~~~P~~R~ti-~~i~ 583 (601)
T KOG0590|consen 555 SLLPRETRIIIYRMLQLDPTKRITI-EQIL 583 (601)
T ss_pred HhchhhHHHHHHHHccCChhheecH-HHHh
Confidence 2345678899999999999999999 6653
|
|
| >PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-16 Score=135.00 Aligned_cols=71 Identities=44% Similarity=0.843 Sum_probs=62.7
Q ss_pred CCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 785 PPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 785 ~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
.|..|.|||+.++|.||+++.+|++||+.+|+.|+..++.+||+|+..|....|+||++||.+|++|+.+|
T Consensus 1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~~ 71 (73)
T PF04564_consen 1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAEN 71 (73)
T ss_dssp SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHHC
T ss_pred CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHHc
Confidence 48899999999999999999999999999999999998899999999999999999999999999999876
|
Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A .... |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.6e-16 Score=177.22 Aligned_cols=202 Identities=25% Similarity=0.274 Sum_probs=157.5
Q ss_pred eeccCceEEEEE-----EECCeEEEEEEecCCCCCC--hhhHHHHHHHHHhcC-CCcceeEeceec--CceEEEEEecCC
Q 003033 536 IGEGGYGSIYKG-----LLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 536 LG~G~fG~Vykg-----~~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
+|+|+||.|+.+ ...+.-+|.|++++..... ......|..++..++ ||.+|++...+. ...+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 799999999853 3445778999987653322 225667899999997 999999988873 468899999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|.|...+.. ...+.......+..+++-+++++|. .+|+|||+|++||+++.+|++|+.|||.-.
T Consensus 82 g~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cg 155 (612)
T KOG0603|consen 82 GDLFTRLSK---EVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACG 155 (612)
T ss_pred chhhhcccc---CCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhccc
Confidence 999988843 3446666777788899999999999 899999999999999999999999997311
Q ss_pred c---------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhcc
Q 003033 676 S---------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEM 746 (855)
Q Consensus 676 ~---------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~ 746 (855)
+ ......+|+||||++++||+||..||.. ..... +.......|...+..+.+++..++..
T Consensus 156 t~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~-~~~~~----------Il~~~~~~p~~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 156 TYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG-DTMKR----------ILKAELEMPRELSAEARSLFRQLFKR 224 (612)
T ss_pred chhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch-HHHHH----------HhhhccCCchhhhHHHHHHHHHHHhh
Confidence 0 1245679999999999999999999976 11111 11122345667777888999999999
Q ss_pred CCCCCCCh
Q 003033 747 SRKSRPEL 754 (855)
Q Consensus 747 dP~~RPs~ 754 (855)
+|..|--.
T Consensus 225 ~p~nrLg~ 232 (612)
T KOG0603|consen 225 NPENRLGA 232 (612)
T ss_pred CHHHHhcc
Confidence 99988654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-14 Score=139.06 Aligned_cols=146 Identities=21% Similarity=0.291 Sum_probs=118.6
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCC--CcceeEeceecC--ceEEEEEecCCCCH
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--PNLVTLVGACPE--VWTLVYEYLPNGSL 608 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H--pnIV~l~g~~~~--~~~LV~Ey~~~GsL 608 (855)
.+.||.|.++.||++...+..++||....... ...+.+|+.++..++| ++++++++++.. ..+++|||++++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 46799999999999998888899999865433 4678999999999976 588888887743 68899999998776
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHH
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSF 688 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSf 688 (855)
..+ +......++.+++.+|.+||.....+++|+||+|.|||++..+.+++.|||....+ ...|-|
T Consensus 81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~-----~~~~d~ 145 (155)
T cd05120 81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG-----PPAFDL 145 (155)
T ss_pred ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC-----ChHHHH
Confidence 543 45667788999999999999865558999999999999999899999999976533 234666
Q ss_pred HHHHHHH
Q 003033 689 GIILLRL 695 (855)
Q Consensus 689 Gvvl~el 695 (855)
+.+++-+
T Consensus 146 ~~~~~~~ 152 (155)
T cd05120 146 AAALLFN 152 (155)
T ss_pred HHHHHHh
Confidence 6665544
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.5e-15 Score=158.01 Aligned_cols=208 Identities=22% Similarity=0.318 Sum_probs=133.3
Q ss_pred CccccceeeccCceEEEEEEECC--eEEEEEEecCCCCC---ChhhHHHHHHHHHhcCC-----------Cc-----cee
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRH-----------PN-----LVT 587 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~H-----------pn-----IV~ 587 (855)
.+.....||.|+|+.||.+.+.. ..+|||+....... ..+.+.+|.-....+.+ .- +++
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 34556789999999999999975 88999998654321 23456666544444322 11 112
Q ss_pred Eece---e---c--C-----ceEEEEEecCCCCHHHHhc---ccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 003033 588 LVGA---C---P--E-----VWTLVYEYLPNGSLEDRLS---CKDN-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650 (855)
Q Consensus 588 l~g~---~---~--~-----~~~LV~Ey~~~GsL~~~L~---~~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH 650 (855)
+-+- + . . +.+++|+-+ -+||.+++. .... ...+....+..+..|+++.+++||. .||||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence 1110 1 1 0 235677777 568887753 1111 2235566777888999999999999 89999
Q ss_pred cccccCceeeCCCCcEEEeeccccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCC
Q 003033 651 GDLKPANILLDANFVSKLSDFEFLA------------------------------SGELTPKSDVYSFGIILLRLLTGRP 700 (855)
Q Consensus 651 rDLKp~NILld~~~~~KL~DFg~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~ 700 (855)
+||||+|+|++.+|.++|+||+.+. .-.++.+.|.|+||+++|.|.+|+.
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 9999999999999999999995210 1135778899999999999999999
Q ss_pred CCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCC
Q 003033 701 ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR 751 (855)
Q Consensus 701 pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~R 751 (855)
||+....... .+..-..+. ..++.+..|+..+|+.||.+|
T Consensus 249 Pf~~~~~~~~----------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEAD----------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGST----------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCcccc----------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9986532110 000112334 567889999999999999987
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.4e-14 Score=152.43 Aligned_cols=169 Identities=22% Similarity=0.262 Sum_probs=121.1
Q ss_pred CCCcceeEeceec-----------------------------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHH
Q 003033 581 RHPNLVTLVGACP-----------------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631 (855)
Q Consensus 581 ~HpnIV~l~g~~~-----------------------------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~ 631 (855)
+|||||+++++|. ..+||||--.+ .+|..+|..+ ..+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC----CCchHHHHHHHH
Confidence 5999999988751 12578887663 5899988533 245567778999
Q ss_pred HHHHHHHHHhhcCCCCceecccccCceee--CCC--CcEEEeecccccc-------------------------------
Q 003033 632 ELCSVLIFLHSCKPHSIVHGDLKPANILL--DAN--FVSKLSDFEFLAS------------------------------- 676 (855)
Q Consensus 632 qia~aL~yLH~~~~~~IvHrDLKp~NILl--d~~--~~~KL~DFg~~~~------------------------------- 676 (855)
|+++|+.|||. +||.|||||.+|||| |++ -.+.|+|||....
T Consensus 349 QlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 99999999999 899999999999998 444 3567899973210
Q ss_pred --CC----CCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCC
Q 003033 677 --GE----LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS 750 (855)
Q Consensus 677 --~~----~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~ 750 (855)
|+ --.|+|.|+.|-+.||+++...||....++...... ..+ ...+..|..++..+.+|+...|+.||.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~--Yqe---~qLPalp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT--YQE---SQLPALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh--hhh---hhCCCCcccCChHHHHHHHHHhcCCccc
Confidence 00 013799999999999999999999764433211111 111 1112334455677899999999999999
Q ss_pred CCChHHHHHHHHh
Q 003033 751 RPELGKDVWRVLE 763 (855)
Q Consensus 751 RPs~~~evl~~L~ 763 (855)
||+. +....+|.
T Consensus 501 Rvsp-~iAANvl~ 512 (598)
T KOG4158|consen 501 RVSP-NIAANVLN 512 (598)
T ss_pred cCCc-cHHHhHHH
Confidence 9997 66655555
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.1e-14 Score=141.00 Aligned_cols=134 Identities=19% Similarity=0.237 Sum_probs=95.0
Q ss_pred cceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC--hhhH----------------------HHHHHHHHhcCCCc--c
Q 003033 533 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--PSEF----------------------QQEIDILSKIRHPN--L 585 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--~~~f----------------------~~Ei~iL~~l~Hpn--I 585 (855)
.+.||+|+||.||+|... +..||||++++..... ...+ ..|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999887 7899999987643211 1111 35666666665433 3
Q ss_pred eeEeceecCceEEEEEecCCCCHHHH-hcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC
Q 003033 586 VTLVGACPEVWTLVYEYLPNGSLEDR-LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664 (855)
Q Consensus 586 V~l~g~~~~~~~LV~Ey~~~GsL~~~-L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 664 (855)
...++. ...+|||||+++|++... +.... .. .....++.+++.++.++|.. .+|+||||||+|||++ ++
T Consensus 82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec--CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE-CC
Confidence 344433 346899999999654321 21000 11 45678899999999999973 4899999999999999 89
Q ss_pred cEEEeecccccc
Q 003033 665 VSKLSDFEFLAS 676 (855)
Q Consensus 665 ~~KL~DFg~~~~ 676 (855)
.++|+|||....
T Consensus 152 ~~~liDfg~a~~ 163 (187)
T cd05119 152 KVYIIDVPQAVE 163 (187)
T ss_pred cEEEEECccccc
Confidence 999999998653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=145.18 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=104.9
Q ss_pred cceee-ccCceEEEEEEECCeEEEEEEecCCCC-------------CChhhHHHHHHHHHhcCCCcc--eeEeceecC--
Q 003033 533 SLKIG-EGGYGSIYKGLLRHMQVAIKMLHPHSL-------------QGPSEFQQEIDILSKIRHPNL--VTLVGACPE-- 594 (855)
Q Consensus 533 ~~~LG-~G~fG~Vykg~~~~~~VAvK~l~~~~~-------------~~~~~f~~Ei~iL~~l~HpnI--V~l~g~~~~-- 594 (855)
...|| .||.|+||+....+..++||.+..... .....+.+|+.++.+|+|++| +..++++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 34688 899999999988888999998854211 123467889999999998875 566665421
Q ss_pred ----ceEEEEEecCC-CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 595 ----VWTLVYEYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 595 ----~~~LV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
..+|||||++| .+|.+++.. .+++.. .+.+|+.+|.+||. +||+||||||.|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEE
Confidence 23599999997 699988842 235543 35789999999999 899999999999999999999999
Q ss_pred eccccccCC
Q 003033 670 DFEFLASGE 678 (855)
Q Consensus 670 DFg~~~~~~ 678 (855)
|||......
T Consensus 185 Dfg~~~~~~ 193 (239)
T PRK01723 185 DFDRGELRT 193 (239)
T ss_pred ECCCcccCC
Confidence 999766543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-13 Score=164.49 Aligned_cols=182 Identities=25% Similarity=0.351 Sum_probs=125.7
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecCceEEEEEe
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEY 602 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~~~~LV~Ey 602 (855)
....+|+.++.|-.|+||.||...++ ...+|+|+ +++.. +.+- ||... +..+.|
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a-------------~npfvv--- 135 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFA-------------GNPFVV--- 135 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--ccccc-------------CCccee---
Confidence 34568999999999999999999877 46788844 32211 1111 22222 333333
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc---------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF--------- 673 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~--------- 673 (855)
|+-.+++ .+.++++.. ++.+++|||+ .+|+|||+||+|.||+.-|++|++|||+
T Consensus 136 ---gDc~tll---k~~g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ---GDCATLL---KNIGPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ---chhhhhc---ccCCCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 5555555 233445432 3678999999 7999999999999999999999999951
Q ss_pred -------------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH-HHHhhccccccc
Q 003033 674 -------------------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALDTGKLKNLL 721 (855)
Q Consensus 674 -------------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~-~~~~~~~~~~~~ 721 (855)
+....|+..+|||++|+|+||.+.|..||.+...-. ........
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~---- 274 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD---- 274 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh----
Confidence 223457888999999999999999999987653221 11111111
Q ss_pred CCCCCCCCh---hhHHHHHHHHHHhhccCCCCCCChH
Q 003033 722 DPLAGDWPF---VQAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 722 d~~~~~~p~---~~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
..||. ....++.+++.+.|..+|..|--..
T Consensus 275 ----i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 275 ----IEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ----ccccccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 12332 2346799999999999999997553
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.3e-12 Score=124.66 Aligned_cols=144 Identities=17% Similarity=0.168 Sum_probs=106.8
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEecCCCCHHHH
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSLEDR 611 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey~~~GsL~~~ 611 (855)
.+.|+.|.++.||++...+..|++|+...... ....+..|+.++..+.+.++ .++++...+..++||||++|.++.+.
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~ 81 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE 81 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc
Confidence 35689999999999998889999999765432 23457889999999865544 45666665567899999999887543
Q ss_pred hcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHH
Q 003033 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFG 689 (855)
Q Consensus 612 L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfG 689 (855)
. . ....++.+++.+|..||... +.+++|+|++|.||+++ ++.++++|||.+..+. -.|-||
T Consensus 82 ~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~-----~~~Dla 144 (170)
T cd05151 82 D--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND-----PLFDLA 144 (170)
T ss_pred c--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCC-----hHHHHH
Confidence 1 0 11245678999999999843 23469999999999999 6789999999876432 245566
Q ss_pred HHHHH
Q 003033 690 IILLR 694 (855)
Q Consensus 690 vvl~e 694 (855)
.++.+
T Consensus 145 ~~~~~ 149 (170)
T cd05151 145 NFFSE 149 (170)
T ss_pred HHHHh
Confidence 66544
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-11 Score=142.96 Aligned_cols=155 Identities=20% Similarity=0.234 Sum_probs=104.9
Q ss_pred ceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC--------------------------h--------------hhHHH
Q 003033 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--------------------------P--------------SEFQQ 572 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--------------------------~--------------~~f~~ 572 (855)
..||.|++|.||+|+++ |+.||||+.++..... . -.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 56999999999999985 7899999998752110 0 02455
Q ss_pred HHHHHHhcC----CCcceeEecee---cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHH-HHHHHhhcC
Q 003033 573 EIDILSKIR----HPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS-VLIFLHSCK 644 (855)
Q Consensus 573 Ei~iL~~l~----HpnIV~l~g~~---~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~-aL~yLH~~~ 644 (855)
|...+.+++ |.+-|.+-..+ ....+|||||++|++|.+++..... .+ .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~-- 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR-- 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh--
Confidence 666666653 33333332222 3456899999999999887642211 12 23456666655 4677787
Q ss_pred CCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHHhCC
Q 003033 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLLTGR 699 (855)
Q Consensus 645 ~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~elltG~ 699 (855)
.|++|+|+||.||+++.++.++++|||+...-. ..+.+.+.-+++.++.+.
T Consensus 276 -~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~---~~~r~~l~~l~~a~~~~D 326 (437)
T TIGR01982 276 -DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS---EEDRRYLAEILYGFLNRD 326 (437)
T ss_pred -CCceeCCCCcccEEECCCCcEEEEeCCCeeECC---HHHHHHHHHHHHHHHhcC
Confidence 799999999999999999999999999865432 234555555555555543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.1e-12 Score=140.94 Aligned_cols=142 Identities=22% Similarity=0.328 Sum_probs=108.7
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
.+||.|++|...+|.++|..+......+|.....++.|++.|+.| ++.+|||+||.||.+..+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 467999999999999999766666678888999999999999999 47999999999999999999999999742
Q ss_pred -------------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccC
Q 003033 675 -------------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLD 722 (855)
Q Consensus 675 -------------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d 722 (855)
.+..|+.++||||||+||+||++ -..+|.. .+.+..+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------~~t~~d~-- 472 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------IATLTDI-- 472 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---------HHhhhhh--
Confidence 34567889999999999999998 2222211 1111111
Q ss_pred CCCCCCChh---hHHHHHHHHHHhhccCCCCCCCh
Q 003033 723 PLAGDWPFV---QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 723 ~~~~~~p~~---~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..+.||.. .-++-..|+.+++.+.|.+||+.
T Consensus 473 -r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 473 -RDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred -hcCCCChHHhhcCcHHHHHHHHhcCCCcccCchH
Confidence 11233421 11345688999999999999955
|
|
| >cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family | Back alignment and domain information |
|---|
Probab=99.18 E-value=3e-10 Score=107.52 Aligned_cols=121 Identities=12% Similarity=0.236 Sum_probs=99.6
Q ss_pred eEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (855)
Q Consensus 46 ~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~~ 123 (855)
+|.||||.+ +.++.+|.||++.. .+..+.+|||.++... . ...+.++.|..+..
T Consensus 1 ~Ilv~vd~s-~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~------~-----------------~~~~~~~~l~~~~~ 56 (124)
T cd01987 1 RILVCISGG-PNAERLIRRAARLADRLKAPWYVVYVETPRLN------R-----------------LSEAERRRLAEALR 56 (124)
T ss_pred CEEEEECCC-cchHHHHHHHHHHHHHhCCCEEEEEEecCccc------c-----------------CCHHHHHHHHHHHH
Confidence 478999998 89999999999765 3779999999875421 0 11234567888888
Q ss_pred HHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 124 ~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
++...++. ..++.+.+++++|++++..++|+.||||+...+.+.+.+.+ .++.+|..++ .-|.|||+
T Consensus 57 ~~~~~~~~--~~~~~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~~~G---s~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 57 LAEELGAE--VVTLPGDDVAEAIVEFAREHNVTQIVVGKSRRSRWRELFRG---SLVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred HHHHcCCE--EEEEeCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHHhcc---cHHHHHHHhC-CCCeEEEe
Confidence 88877664 45667789999999999999999999999999999988876 6999999999 45999997
|
The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.1e-10 Score=131.76 Aligned_cols=139 Identities=18% Similarity=0.255 Sum_probs=87.7
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--------------------------Ch-------------
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------------------GP------------- 567 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------------------------~~------------- 567 (855)
.|+. ..||.|++|.||+|+++ |+.||||++++.... ..
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4555 67999999999999986 689999999875210 00
Q ss_pred -hhHHHHHHHHHhcC----CCcceeEecee---cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHH-HH
Q 003033 568 -SEFQQEIDILSKIR----HPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV-LI 638 (855)
Q Consensus 568 -~~f~~Ei~iL~~l~----HpnIV~l~g~~---~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~a-L~ 638 (855)
-+|.+|+..+.+++ +.+.+.+-.++ ....+|||||+.|++|.++-.-... ..+.. .++...+.. +.
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~--g~d~~---~la~~~v~~~~~ 274 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA--GTDMK---LLAERGVEVFFT 274 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc--CCCHH---HHHHHHHHHHHH
Confidence 12445665555553 33333332222 3356799999999999874211111 11111 122211111 11
Q ss_pred HHhhcCCCCceecccccCceeeCCCC----cEEEeecccccc
Q 003033 639 FLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFEFLAS 676 (855)
Q Consensus 639 yLH~~~~~~IvHrDLKp~NILld~~~----~~KL~DFg~~~~ 676 (855)
-+.. .|++|+|+||.||+++.++ .+++.|||+...
T Consensus 275 Qif~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~ 313 (537)
T PRK04750 275 QVFR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGS 313 (537)
T ss_pred HHHh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEE
Confidence 1223 6899999999999999888 999999997654
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-09 Score=113.27 Aligned_cols=141 Identities=23% Similarity=0.336 Sum_probs=110.0
Q ss_pred ceeeccCceEEEEEEECC-eEEEEEEecCCCC-CChhhHHHHHHHHHhcCC--CcceeEeceecC-----ceEEEEEecC
Q 003033 534 LKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRH--PNLVTLVGACPE-----VWTLVYEYLP 604 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~H--pnIV~l~g~~~~-----~~~LV~Ey~~ 604 (855)
..||.|.++.||++...+ ..+++|....... .....+.+|+.++..+++ .++.++++++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998876 7899999765432 235678999999999975 345667777644 4589999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK---------------------------------------- 644 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------- 644 (855)
|++|.+.+.. ..++...+..++.+++.+|.+||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888775521 34677788888899999999998531
Q ss_pred -------------CCCceecccccCceeeCC--CCcEEEeeccccccCC
Q 003033 645 -------------PHSIVHGDLKPANILLDA--NFVSKLSDFEFLASGE 678 (855)
Q Consensus 645 -------------~~~IvHrDLKp~NILld~--~~~~KL~DFg~~~~~~ 678 (855)
+..++|+|+.|.|||++. ++.+.|+||+....+.
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence 245799999999999998 6778999999876543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PRK15005 universal stress protein F; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.2e-09 Score=104.25 Aligned_cols=137 Identities=13% Similarity=0.186 Sum_probs=100.1
Q ss_pred CeEEEEecCCcch--hHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKE--SKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 45 ~~v~VAV~~~~~~--s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
.+|.||||.+ +. +..|+.||++-. .+..+.|+||.++.+.....+. .+.. .... ....++..++.|..
T Consensus 3 ~~ILv~~D~s-~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~-~~~~--~~~~----~~~~~~~~~~~l~~ 74 (144)
T PRK15005 3 RTILVPIDIS-DSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGL-AYSA--ELPA----MDDLKAEAKSQLEE 74 (144)
T ss_pred ccEEEecCCC-chhHHHHHHHHHHHHHhccCCeEEEEEEEccCcccccccc-cccc--cchH----HHHHHHHHHHHHHH
Confidence 4799999998 55 579999999865 4788999999876432211110 0000 1111 12234445566666
Q ss_pred HHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 121 y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
+...+...++.++..+.++ ++++.|++++.+++++-+|||+. .+.+.+.+.+ .++.+|.+++| |.|++|
T Consensus 75 ~~~~~~~~~~~~~~~v~~G-~p~~~I~~~a~~~~~DLIV~Gs~-~~~~~~~llG---S~a~~vl~~a~--cpVlvV 143 (144)
T PRK15005 75 IIKKFKLPTDRVHVHVEEG-SPKDRILELAKKIPADMIIIASH-RPDITTYLLG---SNAAAVVRHAE--CSVLVV 143 (144)
T ss_pred HHHHhCCCCCceEEEEeCC-CHHHHHHHHHHHcCCCEEEEeCC-CCCchheeec---chHHHHHHhCC--CCEEEe
Confidence 6666666778888888887 79999999999999999999987 5667766665 59999999999 999998
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-10 Score=122.73 Aligned_cols=171 Identities=26% Similarity=0.384 Sum_probs=120.4
Q ss_pred HHHHHhcCCCcceeEeceecC-------ceEEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003033 574 IDILSKIRHPNLVTLVGACPE-------VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKP 645 (855)
Q Consensus 574 i~iL~~l~HpnIV~l~g~~~~-------~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~ 645 (855)
..-|-++-|-|||++..|+.+ ...++.|||..|+|..+|... .....+......+|+.||..||.|||++.|
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 344566779999999988843 345789999999999999642 233456777778999999999999999986
Q ss_pred CCceecccccCceeeCCCCcEEEeec------------------------ccc-----ccCCCCcchhHHHHHHHHHHHH
Q 003033 646 HSIVHGDLKPANILLDANFVSKLSDF------------------------EFL-----ASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 646 ~~IvHrDLKp~NILld~~~~~KL~DF------------------------g~~-----~~~~~t~ksDVwSfGvvl~ell 696 (855)
+|+|+++...-|++..+|-+|+.-- |+. .....+..+|||+||...++|.
T Consensus 198 -piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 -PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred -ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 8999999999999999999998643 111 1123456799999999999998
Q ss_pred hCCCC-CCCchH--HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 697 TGRPA-LGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 697 tG~~p-f~~~~~--~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
.|.-- -..... ++.... ..+-.+.. ..-+.++.+|++..|..||++...
T Consensus 277 ilEiq~tnseS~~~~ee~ia-----~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~l 328 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIA-----NVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLL 328 (458)
T ss_pred HheeccCCCcceeehhhhhh-----hheeeccC-------ccccCcCcccccCCCCCCcchhhh
Confidence 87532 211111 111111 11111110 112456789999999999999443
|
|
| >PRK15456 universal stress protein UspG; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.7e-09 Score=102.82 Aligned_cols=137 Identities=16% Similarity=0.174 Sum_probs=105.9
Q ss_pred CeEEEEecCCc-chhHHHHHHHhhhcC-CCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQV-KESKSVLLWALQNSG-GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~-~~s~~al~WAl~~~~-~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+. +.|..|+.||++-.. ...+.||||.++..... ... .. .....|.+..++..++.|..+.
T Consensus 3 ~~ILv~vD~S~~~~s~~al~~A~~la~~~~~l~llhv~~~~~~~~-~~~-~~------~~~~~~~~~~~~~~~~~l~~~~ 74 (142)
T PRK15456 3 KTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLS-LHR-FA------ADVRRFEEHLQHEAEERLQTMV 74 (142)
T ss_pred ccEEEeccCCchhHHHHHHHHHHHHHhcCCeEEEEEEecCccccc-ccc-cc------cchhhHHHHHHHHHHHHHHHHH
Confidence 47999999973 479999999996432 45899999987753211 110 01 1123466666777888888888
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
......+++++..+.++ ++++.|++++.+++++-+|||+...+ +.+.+.+ .++.+|.++++ |.|.+|
T Consensus 75 ~~~~~~~~~v~~~v~~G-~~~~~I~~~a~~~~~DLIVmG~~g~~-~~~~llG---S~a~~v~~~a~--~pVLvV 141 (142)
T PRK15456 75 SHFTIDPSRIKQHVRFG-SVRDEVNELAEELGADVVVIGSRNPS-ISTHLLG---SNASSVIRHAN--LPVLVV 141 (142)
T ss_pred HHhCCCCcceEEEEcCC-ChHHHHHHHHhhcCCCEEEEcCCCCC-ccceecC---ccHHHHHHcCC--CCEEEe
Confidence 87766788888888887 89999999999999999999999865 6666665 68999999999 999987
|
|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-10 Score=96.60 Aligned_cols=63 Identities=57% Similarity=0.993 Sum_probs=60.3
Q ss_pred CcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHH
Q 003033 788 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851 (855)
Q Consensus 788 ~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w 851 (855)
.|.|||..++|.||++..+|++|++++|..|+.. +.+||+|+..+....|+||.+||++|++|
T Consensus 1 ~~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~-~~~cP~~~~~~~~~~l~~~~~l~~~i~~~ 63 (63)
T smart00504 1 EFLCPISLEVMKDPVILPSGQTYERRAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSAIQEW 63 (63)
T ss_pred CcCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH-CCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence 3789999999999999999999999999999987 77999999999999999999999999999
|
Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination. |
| >cd00293 USP_Like Usp: Universal stress protein family | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.7e-09 Score=98.36 Aligned_cols=128 Identities=24% Similarity=0.406 Sum_probs=105.8
Q ss_pred eEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (855)
Q Consensus 46 ~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~~ 123 (855)
+|.||++.+ ..++.++.||++-. .+..+.++||..+....+. .+.+....+.++.|.+|..
T Consensus 1 ~ilv~i~~~-~~~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~ 63 (130)
T cd00293 1 RILVAVDGS-EESERALRWAARLARRLGAELVLLHVVDPPPSSAA----------------ELAELLEEEARALLEALRE 63 (130)
T ss_pred CEEEEeCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEecCCCCcch----------------hHHHHHHHHHHHHHHHHHH
Confidence 478999987 89999999999987 3789999999876532210 3445566778899999999
Q ss_pred HHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 124 ~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
.|...++.+...++.++. +++|++++..++++.||||+...+.+.+.+.+ .++..+.+..+ |.|+++
T Consensus 64 ~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~~---~~~~~ll~~~~--~pvliv 130 (130)
T cd00293 64 ALAEAGVKVETVVLEGDP-AEAILEAAEELGADLIVMGSRGRSGLRRLLLG---SVAERVLRHAP--CPVLVV 130 (130)
T ss_pred HHhcCCCceEEEEecCCC-HHHHHHHHHHcCCCEEEEcCCCCCccceeeec---cHHHHHHhCCC--CCEEeC
Confidence 998899999988887765 99999999999999999999988877665554 68899999977 999875
|
The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.5e-11 Score=144.31 Aligned_cols=218 Identities=26% Similarity=0.380 Sum_probs=155.8
Q ss_pred cCCccccceeeccCceEEEEEEEC---CeEEEEEEecCCC--CCChhhHHHHHHHHHhcC-CCcceeEecee--cCceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~L 598 (855)
...|.....||+|+|+.|-..... ...+|+|.+.... .........|..+-..+. |+|++.+++.. ++..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 345777778999999999766442 3457777766543 222334456888888887 99999999987 456779
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCceecccccCceeeCCCC-cEEEeecccccc
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANF-VSKLSDFEFLAS 676 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~~~ 676 (855)
+++|..+|++.+.+... .....+....-.++.|+..+|.|+| . .++.||||||+|.+++..+ .+|++|||++..
T Consensus 99 ~~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999998877311 1113444556678999999999999 6 7899999999999999999 999999974321
Q ss_pred ---------------C---------------CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC---
Q 003033 677 ---------------G---------------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP--- 723 (855)
Q Consensus 677 ---------------~---------------~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~--- 723 (855)
+ ...+..|+||.|+++.-+++|..|+....... +........
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~ 249 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----GRYSSWKSNKGR 249 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-----ccceeecccccc
Confidence 1 12456899999999999999999986443222 111111111
Q ss_pred -CCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 724 -LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 724 -~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
....|. .......++..+++..+|..|.+.
T Consensus 250 ~~~~~~~-~~~~~~~~~l~k~l~~~~~~r~s~ 280 (601)
T KOG0590|consen 250 FTQLPWN-SISDQAHDLLHKILKENPSNRLSI 280 (601)
T ss_pred cccCccc-cCChhhhhcccccccCCchhcccc
Confidence 112222 234567888889999999999988
|
|
| >PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.9e-09 Score=98.68 Aligned_cols=135 Identities=20% Similarity=0.305 Sum_probs=99.9
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||+|.+ +.+..|++||+... .+..+.++||.++....+... ........+. ...........
T Consensus 3 ~~Ilv~~d~~-~~~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~ 70 (140)
T PF00582_consen 3 KRILVAIDGS-EESRRALRFALELAKRSGAEITLLHVIPPPPQYSFSA-------AEDEESEEEA----EEEEQARQAEA 70 (140)
T ss_dssp SEEEEEESSS-HHHHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHHHH-------HHHHHHHHHH----HHHHHHHHHHH
T ss_pred CEEEEEECCC-HHHHHHHHHHHHHHHhhCCeEEEEEeecccccccccc-------cccccccccc----chhhhhhhHHH
Confidence 5899999988 99999999999976 378999999998764222100 0011111111 11111111111
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
..+...+.....+.+...+++++|++++.+++++-+|||+...+.+.+.+.+ .++..|.+++| |.|++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~g---s~~~~l~~~~~--~pVlvv 139 (140)
T PF00582_consen 71 EEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLFG---SVAEKLLRHAP--CPVLVV 139 (140)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSSH---HHHHHHHHHTS--SEEEEE
T ss_pred HHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCCCccCCCcC---CHHHHHHHcCC--CCEEEe
Confidence 6677778888888888999999999999999999999999988888776654 69999999999 999987
|
UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F .... |
| >cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.2e-08 Score=96.98 Aligned_cols=129 Identities=18% Similarity=0.230 Sum_probs=105.6
Q ss_pred eEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (855)
Q Consensus 46 ~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~~ 123 (855)
+|.|+||.+ +.+..+|.||..-. .+..+.++||..++...+. . .........++++..+..
T Consensus 1 ~ILv~vd~s-~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~ 63 (132)
T cd01988 1 RILVPVANP-NTARDLLELAAALARAQNGEIIPLNVIEVPNHSSP----------S------QLEVNVQRARKLLRQAER 63 (132)
T ss_pred CEEEecCCc-hhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCc----------c------hhHHHHHHHHHHHHHHHH
Confidence 488999999 89999999999866 4678999999876532110 0 011234567789999999
Q ss_pred HHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 124 ~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
++...++.++.+++.+.+++++|++++..++++-+|||+...+.+.+.+.+ .++.+|.+.++ |.|.+|
T Consensus 64 ~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~lG---s~~~~v~~~~~--~pvlvv 131 (132)
T cd01988 64 IAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGSTSLRDRLFG---GVIDQVLESAP--CDVAVV 131 (132)
T ss_pred HhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccceecC---chHHHHHhcCC--CCEEEe
Confidence 999999999999988778999999999999999999999988877555554 59999999999 999987
|
Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.3e-09 Score=106.84 Aligned_cols=133 Identities=16% Similarity=0.151 Sum_probs=94.2
Q ss_pred ceeeccCceEEEEEEEC--------CeEEEEEEecCCCCC---------------------C-hhhHH----HHHHHHHh
Q 003033 534 LKIGEGGYGSIYKGLLR--------HMQVAIKMLHPHSLQ---------------------G-PSEFQ----QEIDILSK 579 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--------~~~VAvK~l~~~~~~---------------------~-~~~f~----~Ei~iL~~ 579 (855)
..||.|-=+.||.|... +..+|||+.+..... + ...+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 35899999999999754 268999998642110 0 11223 79999999
Q ss_pred cCC--CcceeEeceecCceEEEEEecCCCCHHH-HhcccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCCceeccccc
Q 003033 580 IRH--PNLVTLVGACPEVWTLVYEYLPNGSLED-RLSCKDNSPPLSWQTRIRIATELCSVLIFL-HSCKPHSIVHGDLKP 655 (855)
Q Consensus 580 l~H--pnIV~l~g~~~~~~~LV~Ey~~~GsL~~-~L~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~IvHrDLKp 655 (855)
+.- -++..++++ ...+|||||+.++.+.. .|. ...++......+..+++.+|..| |. .+|||+||++
T Consensus 83 l~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence 853 455556654 45679999997654422 231 11344455667789999999998 77 6999999999
Q ss_pred CceeeCCCCcEEEeecccccc
Q 003033 656 ANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 656 ~NILld~~~~~KL~DFg~~~~ 676 (855)
.|||++ ++.+.|+||+..-.
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred HHEEEE-CCcEEEEECCCcee
Confidence 999997 46799999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-08 Score=102.45 Aligned_cols=139 Identities=25% Similarity=0.296 Sum_probs=104.8
Q ss_pred eeeccCceEEEEEEECCeEEEEEEecCCCCCCh--------hhHHHHHHHHHhcC--CCcceeEeceecCceEEEEEecC
Q 003033 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP--------SEFQQEIDILSKIR--HPNLVTLVGACPEVWTLVYEYLP 604 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~--------~~f~~Ei~iL~~l~--HpnIV~l~g~~~~~~~LV~Ey~~ 604 (855)
.|++|+=+.+|.+.+.+.++.+|.-.+.....+ ..-.+|+.+|.+++ --+...+|.+.++...|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 578999999999988887888887554433221 24567999999886 34455667777888889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc--CCCCcc
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS--GELTPK 682 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~--~~~t~k 682 (855)
|-.|.+.|... +..++..+-.-+.-||. .||||+||.++||++.... +.++|||+... ..-...
T Consensus 83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~a 148 (204)
T COG3642 83 GELLKDALEEA----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKA 148 (204)
T ss_pred ChhHHHHHHhc----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhh
Confidence 99999888422 24567777788888999 8999999999999998655 89999997542 222345
Q ss_pred hhHHH
Q 003033 683 SDVYS 687 (855)
Q Consensus 683 sDVwS 687 (855)
+|+|-
T Consensus 149 VDl~V 153 (204)
T COG3642 149 VDLHV 153 (204)
T ss_pred chHHH
Confidence 66664
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.5e-09 Score=124.54 Aligned_cols=214 Identities=25% Similarity=0.287 Sum_probs=153.1
Q ss_pred cccCCccccceeeccCceEEEEEEEC---CeEEEEEEecCCCCCChhhH--HHHHHHHHhc-CCCcceeEecee--cCce
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEF--QQEIDILSKI-RHPNLVTLVGAC--PEVW 596 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~~~~~f--~~Ei~iL~~l-~HpnIV~l~g~~--~~~~ 596 (855)
.-+.+|..+..||.|.|+.||+...+ +..+++|.+.........+. ..|+-+...+ .|.|++.++..+ .+.+
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567899999999999999987655 46789988876544333322 3566666666 488888877665 3467
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEFLA 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~~~ 675 (855)
|+-.|||.++++...+. -...+....++++..+++.++.++|+ +.++|+|+||+||++..+ +..+++||+...
T Consensus 342 ~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccccc
Confidence 78999999998876652 22346667788899999999999998 899999999999999876 788899986331
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...+..+.|+||||..+.+.++|.+.-...... ..+........|..
T Consensus 416 ~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---------~~i~~~~~p~~~~~ 486 (524)
T KOG0601|consen 416 RLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---------LTIRSGDTPNLPGL 486 (524)
T ss_pred ccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---------eeeecccccCCCch
Confidence 123456899999999999999997542211111 01111111112222
Q ss_pred hHHHHHHHHHHhhccCCCCCCCh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
. .++..+...+...++..||.+
T Consensus 487 ~-~~~q~~~kv~~~~~~~~~~l~ 508 (524)
T KOG0601|consen 487 K-LQLQVLLKVMINPDRKRRPSA 508 (524)
T ss_pred H-HhhhhhhhhhcCCccccchhh
Confidence 2 677888888999999999988
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.5e-08 Score=117.32 Aligned_cols=138 Identities=20% Similarity=0.293 Sum_probs=107.5
Q ss_pred CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHH
Q 003033 551 HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 628 (855)
Q Consensus 551 ~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ 628 (855)
+.+|.|...+...........+-+.-|+.+|||||++++..+. +..|||+|-+. .|..+|.. +.-.....
T Consensus 37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v~~ 108 (690)
T KOG1243|consen 37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEVCL 108 (690)
T ss_pred CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHHHH
Confidence 5678888877654433455678889999999999999999884 46799999873 56666642 22345556
Q ss_pred HHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccccCC---------------CCc--------chhH
Q 003033 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGE---------------LTP--------KSDV 685 (855)
Q Consensus 629 i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~---------------~t~--------ksDV 685 (855)
.+.||+.||.|||.. .+++|++|.-+.|+++..|..||++|++..... ..+ ..|.
T Consensus 109 Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~D~ 186 (690)
T KOG1243|consen 109 GLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSIDS 186 (690)
T ss_pred HHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccchhh
Confidence 788999999999864 479999999999999999999999998753111 111 2499
Q ss_pred HHHHHHHHHHHhC
Q 003033 686 YSFGIILLRLLTG 698 (855)
Q Consensus 686 wSfGvvl~elltG 698 (855)
|-|||++++++.|
T Consensus 187 ~~Lg~li~el~ng 199 (690)
T KOG1243|consen 187 WGLGCLIEELFNG 199 (690)
T ss_pred hhHHHHHHHHhCc
Confidence 9999999999999
|
|
| >PRK09982 universal stress protein UspD; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.4e-08 Score=94.90 Aligned_cols=133 Identities=14% Similarity=0.168 Sum_probs=97.4
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+ ..|..||.||++-. .+.++.|+||..+..... .+..++ . ...+.+..++..++.|.++.
T Consensus 4 k~ILvavD~S-~~s~~al~~A~~lA~~~~a~l~llhV~~~~~~~~-~~~~~~----~---~~~~~~~~~~~~~~~l~~~~ 74 (142)
T PRK09982 4 KHIGVAISGN-EEDALLVNKALELARHNDAHLTLIHIDDGLSELY-PGIYFP----A---TEDILQLLKNKSDNKLYKLT 74 (142)
T ss_pred eEEEEEecCC-cchHHHHHHHHHHHHHhCCeEEEEEEccCcchhc-hhhhcc----c---hHHHHHHHHHHHHHHHHHHH
Confidence 5899999999 89999999999865 478999999987643211 111111 1 11233444556667777777
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
..+.. ..++..+.++ ++++.|++++.+.+++-+|||+. ++.+.+.+ + ++..|.++++ |.|.+|-
T Consensus 75 ~~~~~--~~~~~~v~~G-~p~~~I~~~A~~~~aDLIVmG~~-~~~~~~~~----~-va~~V~~~s~--~pVLvv~ 138 (142)
T PRK09982 75 KNIQW--PKTKLRIERG-EMPETLLEIMQKEQCDLLVCGHH-HSFINRLM----P-AYRGMINKMS--ADLLIVP 138 (142)
T ss_pred HhcCC--CcceEEEEec-CHHHHHHHHHHHcCCCEEEEeCC-hhHHHHHH----H-HHHHHHhcCC--CCEEEec
Confidence 65542 3455556665 89999999999999999999975 66766655 2 9999999999 9999985
|
|
| >PRK15118 universal stress global response regulator UspA; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.3e-08 Score=94.79 Aligned_cols=133 Identities=15% Similarity=0.194 Sum_probs=93.4
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|-||||.+ +.|+.||.||++.. .+.++.|+||.++.... ..+..+ .....+++.......+.|..
T Consensus 4 ~~ILvavD~S-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~l~~-- 72 (144)
T PRK15118 4 KHILIAVDLS-PESKVLVEKAVSMARPYNAKVSLIHVDVNYSDL--YTGLID------VNLGDMQKRISEETHHALTE-- 72 (144)
T ss_pred eEEEEEccCC-hhHHHHHHHHHHHHHhhCCEEEEEEEccChhhh--hhhhhh------cchHHHHHHHHHHHHHHHHH--
Confidence 5799999999 89999999999876 37789999995432211 111111 11123333333444444444
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
++...++.....++..-++++.|++++.+++++-+|||+.. + +.+.+ + .++.+|.++++ |.|.+|-
T Consensus 73 -~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~-~~~~l-g---Sva~~v~~~a~--~pVLvv~ 138 (144)
T PRK15118 73 -LSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-D-FWSKL-M---SSARQLINTVH--VDMLIVP 138 (144)
T ss_pred -HHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-c-HHHHH-H---HHHHHHHhhCC--CCEEEec
Confidence 34566888766666555899999999999999999999984 4 33334 3 59999999999 9999985
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-09 Score=121.64 Aligned_cols=220 Identities=24% Similarity=0.242 Sum_probs=150.6
Q ss_pred Cccccceeec--cCceEEEEEEE--C--CeEEEEEEecCC--CCCChhhHHHHHHHHHhcC-CCcceeEeceec--CceE
Q 003033 529 NFDPSLKIGE--GGYGSIYKGLL--R--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWT 597 (855)
Q Consensus 529 ~f~~~~~LG~--G~fG~Vykg~~--~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~ 597 (855)
.|.....+|. |.+|.||.+.. . ...+|+|.-+.. .......=.+|+....+++ |+|.|+.+..+. +..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566677999 99999999877 3 467888884332 2233334456777777775 999999777774 3567
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCCceecccccCceeeCCC-CcEEEeecc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS----VLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFE 672 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~----aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg 672 (855)
+-+|+| +.+|..+..... ..++......+..+... ||.++|+ .+|+|-|+||+||++..+ ...+++|||
T Consensus 195 iqtE~~-~~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeccc-cchhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence 778888 578887764322 23555556666667777 9999999 789999999999999988 889999996
Q ss_pred cc-----------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCC-C--chHHHHHHhhcccccc
Q 003033 673 FL-----------------------------ASGELTPKSDVYSFGIILLRLLTGRPALG-I--TKEVQYALDTGKLKNL 720 (855)
Q Consensus 673 ~~-----------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~-~--~~~~~~~~~~~~~~~~ 720 (855)
.+ ..+-++...|+|++|.++++..+|..++. + ..|.+ +...
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-------~r~~ 341 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-------LRQG 341 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-------cccc
Confidence 32 12346778999999999999999875543 2 12211 1111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
..+ .++-......+...+..+++.+|..|++. + ++..|.-+
T Consensus 342 ~ip--~e~~~~~s~~l~~~~~~~~d~~~~~~~~~-q-~~~~l~~i 382 (524)
T KOG0601|consen 342 YIP--LEFCEGGSSSLRSVTSQMLDEDPRLRLTA-Q-ILTALNVI 382 (524)
T ss_pred cCc--hhhhcCcchhhhhHHHHhcCcchhhhhHH-H-HHhccccc
Confidence 111 11211223456668889999999999887 3 44444433
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.4e-08 Score=96.50 Aligned_cols=152 Identities=20% Similarity=0.252 Sum_probs=106.8
Q ss_pred ccceeeccCceEEEEEEECCeEEEEEEecCCCCCC--------hhhHHHHHHHHHhcCCCcc--eeEeceecCceEEEEE
Q 003033 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNL--VTLVGACPEVWTLVYE 601 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l~HpnI--V~l~g~~~~~~~LV~E 601 (855)
.+..|-+|+=+.|+++.+.|+.+.||.-.+..... ..+..+|+..|.+++--.| ..++.+-....+|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 45678999999999999999998888754432221 2456789999999863222 2333333456789999
Q ss_pred ecCC-CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC---CcEEEeeccccccC
Q 003033 602 YLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFEFLASG 677 (855)
Q Consensus 602 y~~~-GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~~KL~DFg~~~~~ 677 (855)
|++| .++.+++.........+ ......+..|-+.+.-||. ++|||+||..+||||..+ ..+.++|||+....
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred eccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9976 37788775433332222 2336778888899999999 899999999999999544 44589999875433
Q ss_pred --CCCcchhHHH
Q 003033 678 --ELTPKSDVYS 687 (855)
Q Consensus 678 --~~t~ksDVwS 687 (855)
.-+..+|+|=
T Consensus 167 ~~~EDKgVDLYV 178 (229)
T KOG3087|consen 167 RLPEDKGVDLYV 178 (229)
T ss_pred cCcccccceeee
Confidence 3344577774
|
|
| >PRK10116 universal stress protein UspC; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.9e-07 Score=89.21 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=101.3
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||+|.+ ..+..||.+|++-. .+..+.++||..+..+.. + +.......+++..+++.++.|..+
T Consensus 4 ~~ILv~~D~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~l~~~- 72 (142)
T PRK10116 4 SNILVAVAVT-PESQQLLAKAVSIARPVNGKISLITLASDPEMYN--Q-------FAAPMLEDLRSVMQEETQSFLDKL- 72 (142)
T ss_pred ceEEEEccCC-cchHHHHHHHHHHHHHhCCEEEEEEEccCcccch--h-------hhHHHHHHHHHHHHHHHHHHHHHH-
Confidence 5799999999 78999999999865 267899999986643211 1 122334455555556666666655
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
+.+.++..+.++++.-+++++|++++.+.+++-+|||+...+.+.+-+ .++.+|.++++ |.|.||-
T Consensus 73 --~~~~~~~~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~~-----s~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 73 --IQDADYPIEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS-----CSAKRVIASSE--VDVLLVP 138 (142)
T ss_pred --HHhcCCCeEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHHH-----HHHHHHHhcCC--CCEEEEe
Confidence 456687776667777799999999999999999999999888777654 27999999999 9999984
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.9e-07 Score=100.45 Aligned_cols=156 Identities=21% Similarity=0.284 Sum_probs=121.1
Q ss_pred eEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-----C-ceEEEEEecCC-CCHHHHh
Q 003033 542 GSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-----E-VWTLVYEYLPN-GSLEDRL 612 (855)
Q Consensus 542 G~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-----~-~~~LV~Ey~~~-GsL~~~L 612 (855)
.+.|++... |..|++|.++....+.....-.-+++++++.|+|||.+..+|. + .++|||+|.|+ ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 456888653 7889999997665555545556788999999999999988763 2 47899999986 5788766
Q ss_pred cccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---ccC
Q 003033 613 SCKD------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---ASG 677 (855)
Q Consensus 613 ~~~~------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---~~~ 677 (855)
+... .....++...+.++.|+..||.++|+ .|+.-+-|.|.+||++.+.+++|+..|+. ...
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4221 12346778899999999999999999 78888999999999999989998876643 222
Q ss_pred C-----CCcchhHHHHHHHHHHHHhCCC
Q 003033 678 E-----LTPKSDVYSFGIILLRLLTGRP 700 (855)
Q Consensus 678 ~-----~t~ksDVwSfGvvl~elltG~~ 700 (855)
. --.+-|.-.||.+++-|.||..
T Consensus 447 ~~~~le~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 447 PTEPLESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCcchhHHhhhhHHHHHHHHHHHhhccc
Confidence 2 1135799999999999999953
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-08 Score=123.27 Aligned_cols=216 Identities=24% Similarity=0.254 Sum_probs=149.2
Q ss_pred ccCCccccceeeccCceEEEEEEECC--eEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEece--ecCceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGA--CPEVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~--~~~~~~L 598 (855)
..+.|.+.+-+-.|.|+.++-+.-.+ ...++|+.... .....+...++-.++-..+||.++..... |....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 34567777788899999998654332 22333333221 11223334455555555677888877665 4567899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----- 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----- 673 (855)
|++|+.+|+|...|+. .++++..-....+..+..++.|||. ..++|||++|.|+|...+++.+++||+.
T Consensus 882 ~~~~~~~~~~~Skl~~---~~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHN---SGCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhc---CCCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccc
Confidence 9999999999998853 3345544455566778889999998 5589999999999999999999999841
Q ss_pred ---------------------------------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCC
Q 003033 674 ---------------------------------------------------LASGELTPKSDVYSFGIILLRLLTGRPAL 702 (855)
Q Consensus 674 ---------------------------------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf 702 (855)
..+......+|+|++|++++|.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 01122345689999999999999999999
Q ss_pred CCchHHHHHHhhcccccccCCCCCCCC---hhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 703 GITKEVQYALDTGKLKNLLDPLAGDWP---FVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~d~~~~~~p---~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
......+.. .+++. ....|| ...+....+++.+.+..+|.+|-.+
T Consensus 1036 na~tpq~~f------~ni~~-~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a 1083 (1205)
T KOG0606|consen 1036 NAETPQQIF------ENILN-RDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGA 1083 (1205)
T ss_pred CCcchhhhh------hcccc-CCCCCCCCccccChhhhhhhhhhhccCchhccCc
Confidence 654433221 22221 112343 3456778899999999999999877
|
|
| >PRK11175 universal stress protein UspE; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.6e-07 Score=98.80 Aligned_cols=142 Identities=11% Similarity=0.110 Sum_probs=109.3
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.|++|.+ ..+..||.||+.-. .+..++|+||.++... +..+. +.......+++...++.++.|..+.
T Consensus 4 ~~ILv~~D~s-~~~~~al~~a~~lA~~~~a~l~ll~v~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (305)
T PRK11175 4 QNILVVIDPN-QDDQPALRRAVYLAQRNGGKITAFLPIYDFSY-EMTTL------LSPDEREAMRQGVISQRTAWIREQA 75 (305)
T ss_pred ceEEEEcCCC-ccccHHHHHHHHHHHhcCCCEEEEEeccCchh-hhhcc------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999 88999999999955 3678999999755321 11111 1222333344444445667788888
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEecC
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~kg 199 (855)
..|.+.+++++..++...+++++|++++.+++++-+|||+...+.+.+.+.+ .++..|.+++| |.|++|-.+
T Consensus 76 ~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~g---s~~~~l~~~~~--~pvlvv~~~ 147 (305)
T PRK11175 76 KPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIFT---PTDWHLLRKCP--CPVLMVKDQ 147 (305)
T ss_pred HHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhccC---hhHHHHHhcCC--CCEEEeccc
Confidence 8888889999998887679999999999999999999999887777777765 58889999999 999999653
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.7e-07 Score=95.73 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=101.5
Q ss_pred ceEEEEEEECCeEEEEEEecCCCC-----------CChhhHHHHHHHHHhcCCCcc--eeEecee-------cCceEEEE
Q 003033 541 YGSIYKGLLRHMQVAIKMLHPHSL-----------QGPSEFQQEIDILSKIRHPNL--VTLVGAC-------PEVWTLVY 600 (855)
Q Consensus 541 fG~Vykg~~~~~~VAvK~l~~~~~-----------~~~~~f~~Ei~iL~~l~HpnI--V~l~g~~-------~~~~~LV~ 600 (855)
...|++..+.|..|.||....... .....+.+|...+.+|..-+| ..++++. ....+|||
T Consensus 35 ~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 35 GRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred CceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 344667788888999997654321 111247899999988853222 2222222 12367999
Q ss_pred EecCCC-CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-------CCcEEEeecc
Q 003033 601 EYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------NFVSKLSDFE 672 (855)
Q Consensus 601 Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-------~~~~KL~DFg 672 (855)
|++++. +|.+++.... ..+.+...+..++.+++..+.-||. .||+|+||++.|||++. ++.+.|+||+
T Consensus 115 e~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~ 190 (268)
T PRK15123 115 EDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLH 190 (268)
T ss_pred eeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence 999876 8999874211 2234556677899999999999999 89999999999999975 5789999998
Q ss_pred cccc-CCCCcchhHHHHHHHHHH
Q 003033 673 FLAS-GELTPKSDVYSFGIILLR 694 (855)
Q Consensus 673 ~~~~-~~~t~ksDVwSfGvvl~e 694 (855)
-... .....+.-+.-++.+++.
T Consensus 191 r~~~~~~~~~~~r~~dL~~L~~s 213 (268)
T PRK15123 191 RAQIRARVPRRWRDKDLAGLYFS 213 (268)
T ss_pred cccccCCCChHHHHHHHHHHHHH
Confidence 6642 223344334555555444
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-06 Score=89.38 Aligned_cols=124 Identities=23% Similarity=0.253 Sum_probs=77.2
Q ss_pred EEEEEEEC-CeEEEEEEecCCCCCC--------------------------hhhHHHHHHHHHhcCCC--cceeEeceec
Q 003033 543 SIYKGLLR-HMQVAIKMLHPHSLQG--------------------------PSEFQQEIDILSKIRHP--NLVTLVGACP 593 (855)
Q Consensus 543 ~Vykg~~~-~~~VAvK~l~~~~~~~--------------------------~~~f~~Ei~iL~~l~Hp--nIV~l~g~~~ 593 (855)
.||.|... +..||||+.+...... .....+|...|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999874 6889999986431110 01245799999999754 455666443
Q ss_pred CceEEEEEecC--CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCCCceecccccCceeeCCCCcEEEee
Q 003033 594 EVWTLVYEYLP--NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF-LHSCKPHSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 594 ~~~~LV~Ey~~--~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~y-LH~~~~~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
..+|||||++ |..+..+.. .. ++......++.+++..+.. +|. .||||+||.+.|||++.+ .+.|+|
T Consensus 80 -~~~ivME~I~~~G~~~~~l~~-~~----~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 -RNVIVMEYIGEDGVPLPRLKD-VD----LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp -TTEEEEE--EETTEEGGCHHH-CG----GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE--
T ss_pred -CCEEEEEecCCCccchhhHHh-cc----ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEEe
Confidence 4579999998 544443321 11 1123345667777775555 567 799999999999999887 899999
Q ss_pred ccccccC
Q 003033 671 FEFLASG 677 (855)
Q Consensus 671 Fg~~~~~ 677 (855)
||.....
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9865543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.3e-06 Score=86.51 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=101.3
Q ss_pred eeccCceEEEEEEECCeEEEEEEecCCC------CCChhhHHHHHHHHHhcCCCc--ceeEeceec-------CceEEEE
Q 003033 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHS------LQGPSEFQQEIDILSKIRHPN--LVTLVGACP-------EVWTLVY 600 (855)
Q Consensus 536 LG~G~fG~Vykg~~~~~~VAvK~l~~~~------~~~~~~f~~Ei~iL~~l~Hpn--IV~l~g~~~-------~~~~LV~ 600 (855)
-|+||.+-||+-.+.+..+=+|.-.... ..+...|.+|+..|.+|..-+ +.+.+ ++. -.-+||+
T Consensus 26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 3779999999988877778888765221 234567999999999996322 33333 221 1256999
Q ss_pred EecCC-CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc--EEEeeccccc
Q 003033 601 EYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--SKLSDFEFLA 675 (855)
Q Consensus 601 Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--~KL~DFg~~~ 675 (855)
|-++| -+|.+++... ...+.+...+..++.+|+..+.-||. .|+.|+|+-+.|||++.++. ++++|||-..
T Consensus 105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 98764 4898888432 22346677788999999999999999 89999999999999986666 9999998644
|
|
| >PRK11175 universal stress protein UspE; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.6e-06 Score=92.36 Aligned_cols=139 Identities=16% Similarity=0.231 Sum_probs=96.7
Q ss_pred CCeEEEEecCCcch------hHHHHHHHhhh---cCCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKE------SKSVLLWALQN---SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDM 114 (855)
Q Consensus 44 ~~~v~VAV~~~~~~------s~~al~WAl~~---~~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~ 114 (855)
..+|.||+|.+... +..+|.+|++- +++..+.|+||..+...- ... .++. . ....|.+..+.+.
T Consensus 152 ~~~Ilva~D~s~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~-~~~-~~~~--~---~~~~~~~~~~~~~ 224 (305)
T PRK11175 152 GGKILVAVNVASEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPIN-IAI-ELPE--F---DPSVYNDAIRGQH 224 (305)
T ss_pred CCeEEEEeCCCCCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchh-ccc-cccc--c---chhhHHHHHHHHH
Confidence 36899999987333 26799999863 336789999998654311 011 1111 1 1122333334444
Q ss_pred HHHHHHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEE
Q 003033 115 HNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIW 194 (855)
Q Consensus 115 ~~~l~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~ 194 (855)
.+.+..|.. ..++..+.+++...+++++|.+++..++++-||||+..++.+.+.+.+ .++..|..++| |.|.
T Consensus 225 ~~~l~~~~~---~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~llG---S~a~~v~~~~~--~pVL 296 (305)
T PRK11175 225 LLAMKALRQ---KFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFLG---NTAEHVIDHLN--CDLL 296 (305)
T ss_pred HHHHHHHHH---HhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceeec---chHHHHHhcCC--CCEE
Confidence 445555443 346666555555668999999999999999999999998888887776 69999999999 9999
Q ss_pred EEe
Q 003033 195 FIC 197 (855)
Q Consensus 195 ~i~ 197 (855)
+|.
T Consensus 297 vv~ 299 (305)
T PRK11175 297 AIK 299 (305)
T ss_pred EEc
Confidence 994
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.6e-06 Score=86.05 Aligned_cols=104 Identities=28% Similarity=0.316 Sum_probs=78.1
Q ss_pred hhhHHHHHHHHHhcCCCc--ceeEeceec------CceEEEEEecCCC-CHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 003033 567 PSEFQQEIDILSKIRHPN--LVTLVGACP------EVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637 (855)
Q Consensus 567 ~~~f~~Ei~iL~~l~Hpn--IV~l~g~~~------~~~~LV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL 637 (855)
...+.+|...+..|..-. ....+++.. ...+||+|++++. +|.+++..... ++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 446788999888885322 233343331 1347999999884 79998853211 45566778999999999
Q ss_pred HHHhhcCCCCceecccccCceeeCCCC---cEEEeecccccc
Q 003033 638 IFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFEFLAS 676 (855)
Q Consensus 638 ~yLH~~~~~~IvHrDLKp~NILld~~~---~~KL~DFg~~~~ 676 (855)
.-||. .||+|+|++|.|||++.+. .+.++||+-...
T Consensus 132 ~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 8999999999999998876 899999986543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=6e-05 Score=83.62 Aligned_cols=229 Identities=21% Similarity=0.302 Sum_probs=146.1
Q ss_pred cccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCccee--------EeceecC-ceEEEE
Q 003033 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVT--------LVGACPE-VWTLVY 600 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~--------l~g~~~~-~~~LV~ 600 (855)
.....||+|+-+.+|---.-+. .+-|+.+....-.. .+-+..|... .||-+-. |+|.-.. ...+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d-~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD-QVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchhhc-hhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3456799999999994321122 23466654322211 1223334443 4554322 2333222 245677
Q ss_pred EecCCC-CHHHHhc---ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec-----
Q 003033 601 EYLPNG-SLEDRLS---CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----- 671 (855)
Q Consensus 601 Ey~~~G-sL~~~L~---~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF----- 671 (855)
..+++. .+.+++. .+...+...|...+++++.++.+.+-||. .|.+-+|+.++|+|+.+++.+.|.|-
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceee
Confidence 776654 2334432 23445678999999999999999999999 78999999999999999888888764
Q ss_pred ---c---------------------ccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCch-------HHHHHHhhccccc
Q 003033 672 ---E---------------------FLASGELTPKSDVYSFGIILLRLLTG-RPALGITK-------EVQYALDTGKLKN 719 (855)
Q Consensus 672 ---g---------------------~~~~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~-------~~~~~~~~~~~~~ 719 (855)
| .+.+-.-+...|-|.|||++++|+.| +.||.+.. ..+..+..|.+..
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~y 246 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAY 246 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeee
Confidence 1 11122345678999999999999887 89996432 1222333333322
Q ss_pred c------cCCCCCCCChh-hHHHHHHHHHHhhccC--CCCCCChHHHHHHHHhhhHh
Q 003033 720 L------LDPLAGDWPFV-QAEQLANLAMRCCEMS--RKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 720 ~------~d~~~~~~p~~-~~~~l~~L~~~Cl~~d--P~~RPs~~~evl~~L~~~~~ 767 (855)
. ..+....||.. .+..+..|..+|+... +.-||+. +.-+..|..++.
T Consensus 247 a~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a-~aW~aAl~al~~ 302 (637)
T COG4248 247 ASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTA-KAWVAALDALRQ 302 (637)
T ss_pred chhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCH-HHHHHHHHHHHH
Confidence 2 22344567764 3467788888998853 5689998 777777777755
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.5e-07 Score=91.19 Aligned_cols=73 Identities=32% Similarity=0.587 Sum_probs=69.0
Q ss_pred CCCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...|.+.+|.|+.++|.+|++..+|.||++..|.+++..-...+|+|+.+|.-.+++||++|+.+|..|+..|
T Consensus 206 rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~~n 278 (284)
T KOG4642|consen 206 REVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLKEN 278 (284)
T ss_pred ccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHHhc
Confidence 5678999999999999999999999999999999999998889999999999999999999999999988754
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.17 E-value=7.4e-06 Score=86.81 Aligned_cols=131 Identities=20% Similarity=0.178 Sum_probs=87.1
Q ss_pred ccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC----------------------hhhHHHHHHHHHhcCCC--c
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG----------------------PSEFQQEIDILSKIRHP--N 584 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~----------------------~~~f~~Ei~iL~~l~Hp--n 584 (855)
..+..+||-|-=+.||.|... +.++|||.-+...... ....++|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345678999999999999886 7999999865321110 11245799999988643 4
Q ss_pred ceeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC
Q 003033 585 LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664 (855)
Q Consensus 585 IV~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 664 (855)
+.+.+++ +.-.+||||+.|-.|...- ++....-.|+..|+.-+.-+-. .||||+|+.+-|||++.+|
T Consensus 173 VP~P~~~--nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW--NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc--ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCC
Confidence 5554444 3457999999886654421 1111122233333333222223 5899999999999999999
Q ss_pred cEEEeeccc
Q 003033 665 VSKLSDFEF 673 (855)
Q Consensus 665 ~~KL~DFg~ 673 (855)
.+.++||-.
T Consensus 240 ~~~vIDwPQ 248 (304)
T COG0478 240 DIVVIDWPQ 248 (304)
T ss_pred CEEEEeCcc
Confidence 999999943
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.7e-05 Score=82.14 Aligned_cols=139 Identities=17% Similarity=0.266 Sum_probs=82.5
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc--eeEecee--cCceEEEEEecCCCC-
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL--VTLVGAC--PEVWTLVYEYLPNGS- 607 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI--V~l~g~~--~~~~~LV~Ey~~~Gs- 607 (855)
...||+|..+.||+. .+..+++|...... ......+|.+++..+..-.+ .+.++++ .+...+|||+++|.+
T Consensus 6 ~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 6 WTQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred heeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 357999999999984 25567888876533 34567899999998864333 4555554 345678999998863
Q ss_pred HHHHh---------------------cccCCCCCCCHHHHH-HHHH----------HHHH-HHHHHhhc-CCCCceeccc
Q 003033 608 LEDRL---------------------SCKDNSPPLSWQTRI-RIAT----------ELCS-VLIFLHSC-KPHSIVHGDL 653 (855)
Q Consensus 608 L~~~L---------------------~~~~~~~~l~~~~~~-~i~~----------qia~-aL~yLH~~-~~~~IvHrDL 653 (855)
+...+ +.... ...+..... .+.. .+.. ...+|... .+..++|+|+
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 21111 11000 011111110 0100 0111 12222211 1235789999
Q ss_pred ccCceeeCCCCcEEEeeccccccC
Q 003033 654 KPANILLDANFVSKLSDFEFLASG 677 (855)
Q Consensus 654 Kp~NILld~~~~~KL~DFg~~~~~ 677 (855)
.|.||+++.++ +.|+|||.+..+
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~~G 183 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFGYG 183 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcCcC
Confidence 99999999888 999999987654
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.7e-05 Score=81.24 Aligned_cols=100 Identities=24% Similarity=0.285 Sum_probs=79.7
Q ss_pred HHHHHHHHhcCC-CcceeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 003033 571 QQEIDILSKIRH-PNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649 (855)
Q Consensus 571 ~~Ei~iL~~l~H-pnIV~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~Iv 649 (855)
..|.-+|..+.+ +++.+++|+|.. ++|.||.+.+++...-......-.-+|..|.+||.+++..+.+|+......+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~ 84 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY 84 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 358888888976 699999999965 57999998776642100001112368999999999999999999986666788
Q ss_pred ecccccCceeeCCCCcEEEeecc
Q 003033 650 HGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 650 HrDLKp~NILld~~~~~KL~DFg 672 (855)
-.|++|+|+-++++|.+|+.|..
T Consensus 85 lcDv~~~nfgv~~~~~lk~iDld 107 (188)
T PF12260_consen 85 LCDVSPDNFGVNDDGRLKLIDLD 107 (188)
T ss_pred EeecchHHeEEeCCCcEEEEech
Confidence 89999999999999999999995
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.2e-05 Score=79.40 Aligned_cols=143 Identities=22% Similarity=0.302 Sum_probs=85.8
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC--cceeEecee-----cCceEEEEEecCC
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC-----PEVWTLVYEYLPN 605 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp--nIV~l~g~~-----~~~~~LV~Ey~~~ 605 (855)
++.|+.|..+.||+....+..+++|..... .....+.+|+.++..+... .+.+++..+ ....+++|+|++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 357899999999999988889999997653 2346788999999888532 345566533 2235799999999
Q ss_pred CCHHH----------------Hh---ccc-CCCCCCCHHHH---------HHH------------HHHHHH-HHHHHhh-
Q 003033 606 GSLED----------------RL---SCK-DNSPPLSWQTR---------IRI------------ATELCS-VLIFLHS- 642 (855)
Q Consensus 606 GsL~~----------------~L---~~~-~~~~~l~~~~~---------~~i------------~~qia~-aL~yLH~- 642 (855)
..+.. .| +.. ....++.+... ... ...+.. .+..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 87777 11 111 11111221110 000 011222 3333332
Q ss_pred ---cCCCCceecccccCceeeC-CCCcEEEeeccccccC
Q 003033 643 ---CKPHSIVHGDLKPANILLD-ANFVSKLSDFEFLASG 677 (855)
Q Consensus 643 ---~~~~~IvHrDLKp~NILld-~~~~~KL~DFg~~~~~ 677 (855)
..+..++|+|+.|.|||++ .++.+-|.||+.+..+
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~ 198 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG 198 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence 1346799999999999999 6676689999876543
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.9e-05 Score=92.39 Aligned_cols=135 Identities=19% Similarity=0.269 Sum_probs=87.9
Q ss_pred ceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC--------------------------hh--------------hHHH
Q 003033 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--------------------------PS--------------EFQQ 572 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--------------------------~~--------------~f~~ 572 (855)
..|+.++-|.||+|++. |+.||||+.+++-... .. +|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 46899999999999998 7999999998752211 00 1345
Q ss_pred HHHHHHhcC-----CCcc--eeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHH-HHHhhcC
Q 003033 573 EIDILSKIR-----HPNL--VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL-IFLHSCK 644 (855)
Q Consensus 573 Ei~iL~~l~-----HpnI--V~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL-~yLH~~~ 644 (855)
|..-+.+++ .|+| .++|--+.....|+|||++|-.+.+....+. ..++. ..|+..++.+. .-+=.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~f~~q~~~-- 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRAFLRQLLR-- 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHHHHHHHHh--
Confidence 665565553 2332 1222222345679999999988888742222 23442 23333333321 11111
Q ss_pred CCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 645 ~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
.|++|.|..|.||+++.+|.+-+.|||+...
T Consensus 284 -dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 284 -DGFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred -cCccccCCCccceEEecCCcEEEEcCcceec
Confidence 5899999999999999999999999997653
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.9e-05 Score=77.98 Aligned_cols=134 Identities=19% Similarity=0.209 Sum_probs=89.4
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhH---------HHHHHHHHhcCC---CcceeEecee--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEF---------QQEIDILSKIRH---PNLVTLVGAC-- 592 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f---------~~Ei~iL~~l~H---pnIV~l~g~~-- 592 (855)
..+|...+.+-......|.+-...+..+.+|..+.......+.| .+.+..+.+++. -.++.++.+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek 109 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK 109 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence 34666666777777777877777889999999876543322222 244454444432 2222222222
Q ss_pred -----cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 593 -----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 593 -----~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
....+|+|||++|..|.++.. ++. .++..+..++.-||. .|++|+|..|.|++++.++ ++
T Consensus 110 k~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 110 KIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred eeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc-EE
Confidence 234568999999988876541 222 244567778899999 8999999999999998655 89
Q ss_pred Eeeccccc
Q 003033 668 LSDFEFLA 675 (855)
Q Consensus 668 L~DFg~~~ 675 (855)
+.||+...
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99996544
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00017 Score=76.47 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=89.4
Q ss_pred eeccCc-eEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceecC--ceEEEEEecCCCCHHHH
Q 003033 536 IGEGGY-GSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE--VWTLVYEYLPNGSLEDR 611 (855)
Q Consensus 536 LG~G~f-G~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~--~~~LV~Ey~~~GsL~~~ 611 (855)
|-.|.+ ..||+....+..+.||...... ...+.+|+.++..+. +--+.++++++.. ..++||||++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 444555 6889887666678888876443 345778999998884 3334566766643 46899999998777643
Q ss_pred h-------------------cccCC-CCCCCH--HHHHHHHHH--------------------HHHHHHHHhh----cCC
Q 003033 612 L-------------------SCKDN-SPPLSW--QTRIRIATE--------------------LCSVLIFLHS----CKP 645 (855)
Q Consensus 612 L-------------------~~~~~-~~~l~~--~~~~~i~~q--------------------ia~aL~yLH~----~~~ 645 (855)
. +.... ..++.. ......... +...+..|-. ..+
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 1 11110 111110 011100000 1111222211 112
Q ss_pred CCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHH
Q 003033 646 HSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRL 695 (855)
Q Consensus 646 ~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~el 695 (855)
..++|+|+.|.|||++.++...|+||+.+..+.. .|-|+.++..+
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp-----~~Dla~~~~~~ 207 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADR-----YQDLALAVRSL 207 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccccccH-----HHHHHHHHHHh
Confidence 4589999999999999988889999987654432 34566655544
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00035 Score=67.61 Aligned_cols=142 Identities=19% Similarity=0.258 Sum_probs=106.9
Q ss_pred CeEEEEec-CCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVA-KQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 45 ~~v~VAV~-~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
.++.+++| .. +.+..|+.||++.. .+..+.++||..+............. .. .............+.+...
T Consensus 6 ~~il~~~d~~s-~~~~~a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~ 79 (154)
T COG0589 6 KKILVAVDVGS-EAAEKALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALAD----AP-IPLSEEELEEEAEELLAEA 79 (154)
T ss_pred ceEEEEeCCCC-HHHHHHHHHHHHHHHhcCCeEEEEEEeccccccccccccccc----ch-hhhhHHHHHHHHHHHHHHH
Confidence 58899999 77 89999999999965 46677799988775432211110000 00 2223334456677888888
Q ss_pred HHHHhhcCce-eEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 122 LLICRQMGVR-AEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 122 ~~~C~~~~V~-~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
...-.+.++. ++..+.+++.....|++++...+++-+|||+...+.+.+-+.+ .++.+|..++| |.|.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~llG---svs~~v~~~~~--~pVlvv~ 151 (154)
T COG0589 80 KALAEAAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSRGRSGLSRLLLG---SVAEKVLRHAP--CPVLVVR 151 (154)
T ss_pred HHHHHHcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCCCCccccceeee---hhHHHHHhcCC--CCEEEEc
Confidence 8888888888 4889999988899999999999999999999877777664444 69999999999 9999985
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00022 Score=75.18 Aligned_cols=155 Identities=17% Similarity=0.247 Sum_probs=92.2
Q ss_pred ceeeccCceEEEEEEEC---CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC-CcceeEeceecCceEEEEEecCCCCHH
Q 003033 534 LKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGACPEVWTLVYEYLPNGSLE 609 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H-pnIV~l~g~~~~~~~LV~Ey~~~GsL~ 609 (855)
+.|..|-...+|+.... +..|++|+...... ......+|+.++..+.. .-..++++.+.+ .+||||++|.++.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~--~~l~e~i~G~~l~ 80 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQN--GLIYEFIPGRTLE 80 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeCC--cEEEEeeCCCcCC
Confidence 45777888899988765 46788997764322 12233579999998853 334455555442 4799999987653
Q ss_pred HH--------------h---cccCCC--------CCC-CHHHHHHHHH----------------------HHHHHHHHH-
Q 003033 610 DR--------------L---SCKDNS--------PPL-SWQTRIRIAT----------------------ELCSVLIFL- 640 (855)
Q Consensus 610 ~~--------------L---~~~~~~--------~~l-~~~~~~~i~~----------------------qia~aL~yL- 640 (855)
.. | +..... ... .|.....+.. .+...+..|
T Consensus 81 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 160 (235)
T cd05157 81 PEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLK 160 (235)
T ss_pred HHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHH
Confidence 11 1 111111 011 1222212211 111111111
Q ss_pred ---hhc-CCCCceecccccCceeeCC-CCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 641 ---HSC-KPHSIVHGDLKPANILLDA-NFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 641 ---H~~-~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
-.. .+..++|+|+.|.|||++. ++.+.|.||+++..+.. .|-+|+++.|+.
T Consensus 161 ~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~-----~~Dla~~~~e~~ 216 (235)
T cd05157 161 ELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR-----AFDIANHFNEWA 216 (235)
T ss_pred HHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch-----heeHHHHHHHHc
Confidence 111 2357999999999999998 57899999998775543 456777877754
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.5e-05 Score=87.28 Aligned_cols=135 Identities=19% Similarity=0.203 Sum_probs=86.6
Q ss_pred eeeccCceEEEEEEEC-CeEEEEEEecCCCCCCh-------------------------------------hhHHHHHHH
Q 003033 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP-------------------------------------SEFQQEIDI 576 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~-------------------------------------~~f~~Ei~i 576 (855)
.||.-+.|.||+|+++ |..||||+-++.-.... -+|.+|.+-
T Consensus 168 piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~N 247 (538)
T KOG1235|consen 168 PIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKN 247 (538)
T ss_pred hhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHh
Confidence 4788899999999988 57899999887532110 013445544
Q ss_pred HHhc----CCCc------ceeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 003033 577 LSKI----RHPN------LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646 (855)
Q Consensus 577 L~~l----~Hpn------IV~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~ 646 (855)
..++ .|-+ |.++|-.+.....|+||||+|..+.|...-.. ..++-..+..-+.++..-+-+- .
T Consensus 248 ae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i~~~l~~~~~~qIf~-----~ 320 (538)
T KOG1235|consen 248 AERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHDILNKLVEAYLEQIFK-----T 320 (538)
T ss_pred HHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHHHHHHHHHHHHHHHHh-----c
Confidence 4333 3555 44455555556789999999987776542211 1244443333333322222222 4
Q ss_pred CceecccccCceeeC----CCCcEEEeecccccc
Q 003033 647 SIVHGDLKPANILLD----ANFVSKLSDFEFLAS 676 (855)
Q Consensus 647 ~IvHrDLKp~NILld----~~~~~KL~DFg~~~~ 676 (855)
|++|+|-.|.|||+. .++.+.+-|||+...
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 899999999999998 368899999997543
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0005 Score=78.35 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=56.3
Q ss_pred ceeeccCceEEEEEEECC--eEEEEEEecCCC-------CCChhhHHHHHHHHHhcC---CCcceeEeceecCceEEEEE
Q 003033 534 LKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS-------LQGPSEFQQEIDILSKIR---HPNLVTLVGACPEVWTLVYE 601 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~-------~~~~~~f~~Ei~iL~~l~---HpnIV~l~g~~~~~~~LV~E 601 (855)
..||.|.++.||+....+ +.|.||.-.+.. .....++..|.+.|..+. -.++.+++.+..+..++|||
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME 111 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME 111 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence 468999999999998875 389999854321 123466788999998873 35678888887777889999
Q ss_pred ecCCCC
Q 003033 602 YLPNGS 607 (855)
Q Consensus 602 y~~~Gs 607 (855)
|+++..
T Consensus 112 ~L~~~~ 117 (401)
T PRK09550 112 DLSDHK 117 (401)
T ss_pred cCCCcc
Confidence 998743
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00032 Score=87.68 Aligned_cols=75 Identities=16% Similarity=0.298 Sum_probs=55.4
Q ss_pred cceeeccCceEEEEEEECC----eEEEEEEecCCCC-CChhhHHHHHHHHHhcC-CCcc--eeEeceecC-----ceEEE
Q 003033 533 SLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIR-HPNL--VTLVGACPE-----VWTLV 599 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~-HpnI--V~l~g~~~~-----~~~LV 599 (855)
...|+.|.++.+|+....+ ..+++|+...... .....+.+|+.+|+.+. |+++ .+++++|.+ ..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 4568999999999876654 4677777654322 23456889999999996 6665 777888753 47899
Q ss_pred EEecCCCC
Q 003033 600 YEYLPNGS 607 (855)
Q Consensus 600 ~Ey~~~Gs 607 (855)
|||++|..
T Consensus 123 ME~v~G~~ 130 (822)
T PLN02876 123 MEYLEGRI 130 (822)
T ss_pred EEecCCcc
Confidence 99998764
|
|
| >PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00034 Score=78.39 Aligned_cols=100 Identities=12% Similarity=0.196 Sum_probs=76.7
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC----CCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG----GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~----~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
.+|-||||++ +.|+.|+..|++-.. +.++.+|||.++....+ + . .......++++..
T Consensus 6 kkILVavDGS-e~S~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~--~--------~--------~~~~~~~eelle~ 66 (357)
T PRK12652 6 NRLLVPVADS-VTVRQTVAYAVESAEEAAETPTVHLVAAASGRAVDP--E--------G--------QDELAAAEELLER 66 (357)
T ss_pred CeEEEEeCCC-HHHHHHHHHHHHHHHhcCCCCEEEEEEEecCccccc--c--------h--------hHHHHHHHHHHHH
Confidence 6899999999 999999999998752 47899999977542111 0 0 1122344556666
Q ss_pred HHHHHhh------cCceeEEEEecc-------CChhHHHHHHHHHcCCcEEEeecC
Q 003033 121 CLLICRQ------MGVRAEKLDTES-------ESTEKGILELISHYGIRKLVMGAA 163 (855)
Q Consensus 121 y~~~C~~------~~V~~~~~~ie~-------~dv~k~i~e~i~~~~I~~LVmGa~ 163 (855)
....+.. .+|++++.+++. -++++.|++|+.+++++-+|||-.
T Consensus 67 ~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~ 122 (357)
T PRK12652 67 VEVWATEDLGDDASSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPE 122 (357)
T ss_pred HHHHHHHhhhcccCCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 6666654 599999999884 499999999999999999999954
|
|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00042 Score=87.35 Aligned_cols=125 Identities=15% Similarity=0.237 Sum_probs=96.1
Q ss_pred cCCCeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHH
Q 003033 42 VIEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119 (855)
Q Consensus 42 ~~~~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 119 (855)
...+.|.|||+.+ ..+...+++|.+-- -+..+..|||..+..- .+. ....+-+.
T Consensus 248 ~~~eriLV~v~~~-~~~~~lIr~~~rlA~~~~a~~~~l~V~~~~~~-----------~~~------------~~~~~~l~ 303 (895)
T PRK10490 248 HTRDAILLCIGHN-TGSEKLVRTAARLAARLGSVWHAVYVETPRLH-----------RLP------------EKKRRAIL 303 (895)
T ss_pred CcCCeEEEEECCC-cchHHHHHHHHHHHHhcCCCEEEEEEecCCcC-----------cCC------------HHHHHHHH
Confidence 3557899999999 88999999998765 3678999999866320 001 11233455
Q ss_pred HHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 120 MCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 120 ~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
.++.+|.+.|.+ .+.+.++||+++|++|+..+||+++|||.+.++.+ +. +..++..+.+.+|+ =+|++|..
T Consensus 304 ~~~~lA~~lGa~--~~~~~~~dva~~i~~~A~~~~vt~IViG~s~~~~~---~~--~~s~~~~l~r~~~~-idi~iv~~ 374 (895)
T PRK10490 304 SALRLAQELGAE--TATLSDPAEEKAVLRYAREHNLGKIIIGRRASRRW---WR--RESFADRLARLGPD-LDLVIVAL 374 (895)
T ss_pred HHHHHHHHcCCE--EEEEeCCCHHHHHHHHHHHhCCCEEEECCCCCCCC---cc--CCCHHHHHHHhCCC-CCEEEEeC
Confidence 666799887654 77889999999999999999999999999987765 32 23688999999974 68999953
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00029 Score=70.56 Aligned_cols=128 Identities=18% Similarity=0.156 Sum_probs=88.5
Q ss_pred cccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcce-eEeceecCceEEEEEecCCCCHH
Q 003033 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV-TLVGACPEVWTLVYEYLPNGSLE 609 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV-~l~g~~~~~~~LV~Ey~~~GsL~ 609 (855)
.....||+|++|.||+|.+++..+|+|+-+.++ ....+..|+++|..+.--++. ++|.+-. .++.|||+.|-.|.
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~--~~i~me~i~G~~L~ 100 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGE--DFIRMEYIDGRPLG 100 (201)
T ss_pred hhhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEech--hhhhhhhhcCcchh
Confidence 345679999999999999999999999987654 356788999999988765553 3343322 23569999888887
Q ss_pred HHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccc-cCceeeCCCCcEEEeeccccc
Q 003033 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK-PANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 610 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLK-p~NILld~~~~~KL~DFg~~~ 675 (855)
+.-.. .+-.+. ..+++.-.-|-. .||-|..|. |..++|..++.+.|+||+-+.
T Consensus 101 ~~~~~------~~rk~l----~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 101 KLEIG------GDRKHL----LRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhc------ccHHHH----HHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 76521 111222 334444333444 688888885 555555555589999998665
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0004 Score=73.46 Aligned_cols=139 Identities=22% Similarity=0.305 Sum_probs=76.6
Q ss_pred ceeeccCce-EEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC---cceeEeceec--C---ceEEEEEecC
Q 003033 534 LKIGEGGYG-SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP---NLVTLVGACP--E---VWTLVYEYLP 604 (855)
Q Consensus 534 ~~LG~G~fG-~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp---nIV~l~g~~~--~---~~~LV~Ey~~ 604 (855)
..|+.||.. .||+. +..+++|..+.. .....+.+|..+|..|... -+..+++.+. + ..+++|++++
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 457777777 48864 345677875532 2345788999999888531 2333444332 1 3478999999
Q ss_pred CCCHHHH------------------hcccCCCC-C------------C-CHHHHH--HHH-------HHHHHHH-H-HHh
Q 003033 605 NGSLEDR------------------LSCKDNSP-P------------L-SWQTRI--RIA-------TELCSVL-I-FLH 641 (855)
Q Consensus 605 ~GsL~~~------------------L~~~~~~~-~------------l-~~~~~~--~i~-------~qia~aL-~-yLH 641 (855)
|.++.+. |+...... + + .|.... .+. .+....+ . +++
T Consensus 78 G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 157 (235)
T cd05155 78 GETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAALR 157 (235)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHhc
Confidence 8665321 11110000 0 0 121110 000 0111111 1 111
Q ss_pred h--cCCCCceecccccCceeeCCCCcEEEeeccccccC
Q 003033 642 S--CKPHSIVHGDLKPANILLDANFVSKLSDFEFLASG 677 (855)
Q Consensus 642 ~--~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~ 677 (855)
. ..+..++|+|+.|.|||++.+...-|.|||.+..+
T Consensus 158 ~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~g 195 (235)
T cd05155 158 APWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVG 195 (235)
T ss_pred ccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcC
Confidence 1 12345899999999999997766779999986554
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00032 Score=75.12 Aligned_cols=152 Identities=17% Similarity=0.175 Sum_probs=88.0
Q ss_pred eeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEecCCCCHHH----
Q 003033 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSLED---- 610 (855)
Q Consensus 536 LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey~~~GsL~~---- 610 (855)
+..|-.+.+|+....+..+++|..........-...+|..+++.+..-.+ .++++.+. .++||||++|..+..
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~ 81 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFV 81 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCccccccccc
Confidence 55677889998877777888988654322211246789999999864323 34444443 368999999866532
Q ss_pred ----------Hh---cccC-CCCCCCHHHH-HHHHHHH---------HHHHHHHhh-----cCCCCceecccccCceeeC
Q 003033 611 ----------RL---SCKD-NSPPLSWQTR-IRIATEL---------CSVLIFLHS-----CKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 611 ----------~L---~~~~-~~~~l~~~~~-~~i~~qi---------a~aL~yLH~-----~~~~~IvHrDLKp~NILld 661 (855)
.| +... ...+++.... ..+..++ ...+..+-. ..+..++|+|+.|.|||++
T Consensus 82 ~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~ 161 (256)
T TIGR02721 82 ALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVT 161 (256)
T ss_pred CchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEe
Confidence 11 1111 1112222211 1111111 111222211 1123689999999999999
Q ss_pred CCCcEEEeeccccccCCCCcchhHHHHHHHHHHH
Q 003033 662 ANFVSKLSDFEFLASGELTPKSDVYSFGIILLRL 695 (855)
Q Consensus 662 ~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~el 695 (855)
.++ +.|.|||++..+.. .|-||.++.+.
T Consensus 162 ~~~-~~lIDwE~a~~gdp-----~~DLa~~~~~~ 189 (256)
T TIGR02721 162 PQG-LKLIDWEYASDGDI-----ALELAAIIRAN 189 (256)
T ss_pred CCC-CEEEeccccCcCCH-----HHHHHHHHHhC
Confidence 877 78999998765532 34456655553
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.56 E-value=2e-05 Score=92.35 Aligned_cols=117 Identities=26% Similarity=0.445 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc----------------------------------cccC
Q 003033 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----------------------------------LASG 677 (855)
Q Consensus 632 qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~----------------------------------~~~~ 677 (855)
+++.||.|+|.. .++||++|.|++|.++.++..||+.|++ +...
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 445899999985 5899999999999999999999999942 2223
Q ss_pred CCCcchhHHHHHHHHHHHH-hCCCCCCCchHHH-HHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 678 ELTPKSDVYSFGIILLRLL-TGRPALGITKEVQ-YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 678 ~~t~ksDVwSfGvvl~ell-tG~~pf~~~~~~~-~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..++++|+|||||++|-+. .|++-+....... ....... .+.....++...+.++.+=+.+.+..++.-||++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~----~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNL----LNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcc----cccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 3467899999999999998 5665553322111 1111111 1111112334556788888999999999999976
|
|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0026 Score=76.22 Aligned_cols=131 Identities=15% Similarity=0.184 Sum_probs=103.1
Q ss_pred ccCCCeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHH
Q 003033 41 SVIEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHL 118 (855)
Q Consensus 41 ~~~~~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l 118 (855)
+...+.|.|+||.+ -.|-..++||.+-- -+..+..|||-.|... + ..++-.+-|
T Consensus 245 ~~~~e~ilvcI~~~-~~~e~liR~a~RlA~~~~a~~~av~v~~~~~~----~-------------------~~~~~~~~l 300 (890)
T COG2205 245 WAARERILVCISGS-PGSEKLIRRAARLASRLHAKWTAVYVETPELH----R-------------------LSEKEARRL 300 (890)
T ss_pred ccccceEEEEECCC-CchHHHHHHHHHHHHHhCCCeEEEEEeccccc----c-------------------ccHHHHHHH
Confidence 34558999999999 77888999997754 2678999999877531 1 112334556
Q ss_pred HHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 119 DMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 119 ~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
..-+.+|.+. -++.+++.++||+++|++|+..++++++|||-+.++.+.+.|++ +.+..++..+|+ -.|++|..
T Consensus 301 ~~~~~Lae~l--Gae~~~l~~~dv~~~i~~ya~~~~~TkiViG~~~~~rw~~~~~~---~l~~~L~~~~~~-idv~ii~~ 374 (890)
T COG2205 301 HENLRLAEEL--GAEIVTLYGGDVAKAIARYAREHNATKIVIGRSRRSRWRRLFKG---SLADRLAREAPG-IDVHIVAL 374 (890)
T ss_pred HHHHHHHHHh--CCeEEEEeCCcHHHHHHHHHHHcCCeeEEeCCCcchHHHHHhcc---cHHHHHHhcCCC-ceEEEeeC
Confidence 6677788766 47899999999999999999999999999999998888877764 688888888875 57888875
Q ss_pred Cee
Q 003033 199 GNL 201 (855)
Q Consensus 199 gkl 201 (855)
+.-
T Consensus 375 ~~~ 377 (890)
T COG2205 375 DAP 377 (890)
T ss_pred CCC
Confidence 443
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0018 Score=71.20 Aligned_cols=73 Identities=22% Similarity=0.132 Sum_probs=54.3
Q ss_pred ceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCC---CcceeEeceec-----CceEEEEEecCC
Q 003033 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH---PNLVTLVGACP-----EVWTLVYEYLPN 605 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H---pnIV~l~g~~~-----~~~~LV~Ey~~~ 605 (855)
..||.|..+.||+-...+..+.+|..+. ......|..|...|+.|.- -.+.++++.|. +..+||||++++
T Consensus 20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 20 ECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 4599999999998766555677787542 1134588999999998853 35777887763 447999999998
Q ss_pred CCH
Q 003033 606 GSL 608 (855)
Q Consensus 606 GsL 608 (855)
+++
T Consensus 98 ~~~ 100 (297)
T PRK10593 98 VSV 100 (297)
T ss_pred Eec
Confidence 764
|
|
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0056 Score=67.70 Aligned_cols=156 Identities=21% Similarity=0.287 Sum_probs=88.1
Q ss_pred ceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-----CCcceeE-----eceecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----HPNLVTL-----VGACPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----HpnIV~l-----~g~~~~~~~LV~Ey~ 603 (855)
+.|+.|....+|+....+..+++|+... ........|+.++..|. -|.++.- +....+..+++++|+
T Consensus 28 ~~l~~G~~n~~y~v~t~~g~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQGEYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred chhccccccceEEEEeCCCcEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 4567777788998876666789998762 22344455666666663 2333321 111234568999999
Q ss_pred CCCCHH-----------HHh---cccC--------CCCCCCH-HHHHHHH-------------HHHHHHHHHHhh----c
Q 003033 604 PNGSLE-----------DRL---SCKD--------NSPPLSW-QTRIRIA-------------TELCSVLIFLHS----C 643 (855)
Q Consensus 604 ~~GsL~-----------~~L---~~~~--------~~~~l~~-~~~~~i~-------------~qia~aL~yLH~----~ 643 (855)
+|..+. ..| +... ....+.| .....-. ..+...+..+.. .
T Consensus 105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 184 (319)
T PRK05231 105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA 184 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence 886431 111 1100 0111222 1111111 111112233321 1
Q ss_pred CCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHHh
Q 003033 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 644 ~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ellt 697 (855)
-|.++||+|+.|.|||++.+...-|.||+.+..+.. +|=+++++...+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~~-----~~DlA~~~~~~~~ 233 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDKL-----LYDVAITLNDWCF 233 (319)
T ss_pred CCcccCCCCCCCCcEEEECCceEEEEecccccCCch-----HHHHHHHHHHHHc
Confidence 356899999999999999776678999988765543 6667777655544
|
|
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0023 Score=70.28 Aligned_cols=156 Identities=21% Similarity=0.280 Sum_probs=93.0
Q ss_pred ceeeccCceEEEEEEECC--------eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc-ceeEeceecCceEEEEEecC
Q 003033 534 LKIGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACPEVWTLVYEYLP 604 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~--------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-IV~l~g~~~~~~~LV~Ey~~ 604 (855)
..|..|-...||+....+ ..+++|+..... .......+|..++..+.... ..++++++.+ .+|+||++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--~~v~e~i~ 80 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN--GRIEEFIP 80 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC--CchhheeC
Confidence 345566677889877653 678999976543 22345678999998885322 3356666653 36899998
Q ss_pred CCCHHHH-----------------hcccCCC--------CCCCHHHHHHH--------------------------HHHH
Q 003033 605 NGSLEDR-----------------LSCKDNS--------PPLSWQTRIRI--------------------------ATEL 633 (855)
Q Consensus 605 ~GsL~~~-----------------L~~~~~~--------~~l~~~~~~~i--------------------------~~qi 633 (855)
|..+... |+..... .+.-|.....+ ...+
T Consensus 81 G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (302)
T cd05156 81 SRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDE 160 (302)
T ss_pred CCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHH
Confidence 8765321 1111111 01112111111 1122
Q ss_pred HHHHHHHhh------cCCCCceecccccCceeeCCC----CcEEEeeccccccCCCCcchhHHHHHHHHHHHHh
Q 003033 634 CSVLIFLHS------CKPHSIVHGDLKPANILLDAN----FVSKLSDFEFLASGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 634 a~aL~yLH~------~~~~~IvHrDLKp~NILld~~----~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ellt 697 (855)
...+.+|-. ..+..++|+|+.|.|||++.+ +.+.|+|||++..+.. .|=+|.++.|+..
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p-----~~DlA~~~~e~~~ 229 (302)
T cd05156 161 AKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR-----GFDIANHFCEWMY 229 (302)
T ss_pred HHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc-----HHHHHHHHHHHHh
Confidence 223334432 134579999999999999874 8899999999775543 4556777777653
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.003 Score=65.22 Aligned_cols=123 Identities=23% Similarity=0.336 Sum_probs=89.5
Q ss_pred cCCccccceeeccCc-eEEEEEEECCeEEEEEEecC---CCC------------------CChhhHHHHHHHHHhcC---
Q 003033 527 THNFDPSLKIGEGGY-GSIYKGLLRHMQVAIKMLHP---HSL------------------QGPSEFQQEIDILSKIR--- 581 (855)
Q Consensus 527 ~~~f~~~~~LG~G~f-G~Vykg~~~~~~VAvK~l~~---~~~------------------~~~~~f~~Ei~iL~~l~--- 581 (855)
+.+|+.++.||.|.- |.||+....+..+|+|++.. ... ....-|..|.....+|+
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 368888999999999 99999999999999999321 111 01224778998888885
Q ss_pred CCcc--eeEecee--c------------------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 003033 582 HPNL--VTLVGAC--P------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 639 (855)
Q Consensus 582 HpnI--V~l~g~~--~------------------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~y 639 (855)
+.++ |+.+|+. . ..+.||.||++... .+... -+.+|.+-|..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~----~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIR----DIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchh----HHHHHHHHHHH
Confidence 4566 8888886 1 01457888886543 12222 24566777888
Q ss_pred HhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 640 LH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
+|. .||+-+|+++.|.. .-||+||+.
T Consensus 180 ~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~ 205 (207)
T PF13095_consen 180 LHK---LGIVPRDVKPRNYR-----GGKLVDFSS 205 (207)
T ss_pred HHH---CCeeeccCcccccc-----CCEEEeccc
Confidence 998 79999999999986 238999974
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.004 Score=64.41 Aligned_cols=127 Identities=24% Similarity=0.271 Sum_probs=85.5
Q ss_pred ccceeeccCceEEEEEEECCeEEEEEEecCCC----------------CCChhhHHHHHHHHHhcC------CCcceeEe
Q 003033 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS----------------LQGPSEFQQEIDILSKIR------HPNLVTLV 589 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~----------------~~~~~~f~~Ei~iL~~l~------HpnIV~l~ 589 (855)
....||+|+.-.||.-- .+....||++.+.. .....++.+|+.....+. +.+|.+++
T Consensus 5 ~~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CCcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 34579999999999421 13457889988765 122456778888777776 78899999
Q ss_pred ceecC--ceEEEEEecCC------CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 590 GACPE--VWTLVYEYLPN------GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 590 g~~~~--~~~LV~Ey~~~------GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
|+... ...+|+|.+.+ -+|.+++.. ..++. .....+.+ -..||-. +.|+.+||+|.||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~~~~L~~---f~~~l~~---~~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-ELRQALDE---FKRYLLD---HHIVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HHHHHHHH---HHHHHHH---cCCeecCCCcccEEEE
Confidence 99844 45688887543 258888842 23444 33333333 3455555 6799999999999995
Q ss_pred CC--C--cEEEee
Q 003033 662 AN--F--VSKLSD 670 (855)
Q Consensus 662 ~~--~--~~KL~D 670 (855)
.. + .+.|+|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 32 2 577777
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=72.10 Aligned_cols=156 Identities=17% Similarity=0.204 Sum_probs=94.4
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC--cceeEecee--------cCceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC--------PEVWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp--nIV~l~g~~--------~~~~~LV~Ey 602 (855)
...|..|....+|+....+..+++|+... ........|+.++..|.+. .+.+++... .+..++|++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 44577787789998877777899998764 2345677888888888532 244444322 3345789999
Q ss_pred cCCCCHHH-----------Hh---ccc----CC----CCCCCHHHHHH----------HHHHHHHHHHHHhh----cCCC
Q 003033 603 LPNGSLED-----------RL---SCK----DN----SPPLSWQTRIR----------IATELCSVLIFLHS----CKPH 646 (855)
Q Consensus 603 ~~~GsL~~-----------~L---~~~----~~----~~~l~~~~~~~----------i~~qia~aL~yLH~----~~~~ 646 (855)
++|..+.. .| +.. .. .....|..... ....+..++.++.. ..+.
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 98866421 11 100 00 01123322210 11112334444442 2346
Q ss_pred CceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 647 SIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 647 ~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
+++|+|+.|.|||++.++.+.|.||+.+..+. -+|-|+.++..+.
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~-----~~~Dla~~~~~~~ 220 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFACTDA-----FLYDLAITLNDWC 220 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhcCch-----HHHHHHHHHHHHH
Confidence 79999999999999998878999998876543 2455555554433
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0019 Score=68.20 Aligned_cols=133 Identities=19% Similarity=0.184 Sum_probs=81.6
Q ss_pred eeeccCceEEEEEEEC-CeEEEEEEecCCCCCChh---------h---------------HHHHHHHHHhcC--CCccee
Q 003033 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPS---------E---------------FQQEIDILSKIR--HPNLVT 587 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~---------~---------------f~~Ei~iL~~l~--HpnIV~ 587 (855)
.|..|-=+.||+|.-. +..||||+.+........ . ..+|+.-|.++. +=.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 4667777899998764 688999998754322111 1 124666666653 222222
Q ss_pred EeceecCceEEEEEecCCC-CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 588 LVGACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 588 l~g~~~~~~~LV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
-+++. ...|||||+... .-...|.. .++.......+..++++.+.-|-.. .++||+||..=|||+. ++.+
T Consensus 135 Pi~~~--~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 135 PIAFR--NNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred ceeec--CCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-CCeE
Confidence 23222 345999998543 11122211 1122224555666677766665432 5899999999999999 8899
Q ss_pred EEeecccccc
Q 003033 667 KLSDFEFLAS 676 (855)
Q Consensus 667 KL~DFg~~~~ 676 (855)
.|+||+.+-.
T Consensus 206 ~iID~~QaV~ 215 (268)
T COG1718 206 YIIDVSQAVT 215 (268)
T ss_pred EEEECccccc
Confidence 9999986543
|
|
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.01 Score=65.49 Aligned_cols=157 Identities=19% Similarity=0.234 Sum_probs=92.6
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC--cceeEecee--------cCceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC--------PEVWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp--nIV~l~g~~--------~~~~~LV~Ey 602 (855)
...++.|....+|+....+..+++|+.+... .......|++++..|... .+.+++... .+..+++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 4557777778999877666678889876422 244566788888877422 234444332 2346789999
Q ss_pred cCCCCHH-----------HHh---cccCCC--C-------CCCHHHHHH------------HHHHHHHHHHHHhh----c
Q 003033 603 LPNGSLE-----------DRL---SCKDNS--P-------PLSWQTRIR------------IATELCSVLIFLHS----C 643 (855)
Q Consensus 603 ~~~GsL~-----------~~L---~~~~~~--~-------~l~~~~~~~------------i~~qia~aL~yLH~----~ 643 (855)
++|..+. ..| +..... . .-.|..... ....+...+.++.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 9885431 111 110000 0 012221111 01123334555542 3
Q ss_pred CCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 644 ~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
.+.+++|+|+.+.||+++.++...|.||+....+. -+|-|++++..+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~-----~~~DLA~~~~~~~ 232 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA-----RAYDLAITVNAWC 232 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeecccccCcc-----hHHHHHHHHHHHH
Confidence 45789999999999999998877899998866543 3566666654443
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.012 Score=65.98 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=51.8
Q ss_pred eeeccCceEEEEEEECC--eEEEEEEecCC-------CCCChhhHHHHHHHHHhcC--CC-cceeEeceecCceEEEEEe
Q 003033 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPH-------SLQGPSEFQQEIDILSKIR--HP-NLVTLVGACPEVWTLVYEY 602 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~--~~VAvK~l~~~-------~~~~~~~f~~Ei~iL~~l~--Hp-nIV~l~g~~~~~~~LV~Ey 602 (855)
.||.|....||++...+ +.|+||.-.+. ..-...+..-|...|.... -| .+.++|.+-++...+|||+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vMEd 81 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVMED 81 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHhh
Confidence 47999999999998764 57999985432 1223456667888887764 34 4666777777777899999
Q ss_pred cCCC
Q 003033 603 LPNG 606 (855)
Q Consensus 603 ~~~G 606 (855)
++..
T Consensus 82 L~~~ 85 (370)
T TIGR01767 82 LSHH 85 (370)
T ss_pred Cccc
Confidence 9653
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0096 Score=66.94 Aligned_cols=153 Identities=15% Similarity=0.197 Sum_probs=90.1
Q ss_pred eeeccCceEEEEEEEC------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEecCCCC
Q 003033 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGS 607 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey~~~Gs 607 (855)
.|-.|-...+|+.... +..|++|+......... .-.+|..++..+..-++ .++++.+.+. .|++|+++.+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g--~v~efi~g~~ 119 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG--RVEEFIHART 119 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc--eEEEeeCCCC
Confidence 4545777789987653 25788998765432222 23679999988864333 3556666543 6899998766
Q ss_pred HHHH-----------------hcccCC---CCCCCHHHHHHHHHHH-----------------HHHHHHH----hh-cCC
Q 003033 608 LEDR-----------------LSCKDN---SPPLSWQTRIRIATEL-----------------CSVLIFL----HS-CKP 645 (855)
Q Consensus 608 L~~~-----------------L~~~~~---~~~l~~~~~~~i~~qi-----------------a~aL~yL----H~-~~~ 645 (855)
|... |+.... ..+..|.....+..++ ...+..| .. ..+
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 5321 111111 1122233333332221 1112222 21 233
Q ss_pred CCceecccccCceeeCC-CCcEEEeeccccccCCCCcchhHHHHHHHHHHH
Q 003033 646 HSIVHGDLKPANILLDA-NFVSKLSDFEFLASGELTPKSDVYSFGIILLRL 695 (855)
Q Consensus 646 ~~IvHrDLKp~NILld~-~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~el 695 (855)
..++|+|+++.|||++. ++.+.|+|||++..+.. .|-+|..+.|.
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~-----~~Dia~~~~e~ 245 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV-----AYDIANHFCEM 245 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccch-----HHHHHHHHHHH
Confidence 57899999999999976 47899999998775432 46667766664
|
|
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.021 Score=65.13 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=54.1
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCC-------CChhhHHHHHHHHHhcC---CCcceeEeceecCceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL-------QGPSEFQQEIDILSKIR---HPNLVTLVGACPEVWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~-------~~~~~f~~Ei~iL~~l~---HpnIV~l~g~~~~~~~LV~Ey 602 (855)
.+.||.|.-..||+....+..|+||.-.+... ....+-..|...|..+. ..++.++|++|.+..+++|||
T Consensus 37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~ 116 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRY 116 (418)
T ss_pred EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEee
Confidence 45689999999999877667799998653211 13344455677777664 247888999999888999999
Q ss_pred cCC
Q 003033 603 LPN 605 (855)
Q Consensus 603 ~~~ 605 (855)
+++
T Consensus 117 L~~ 119 (418)
T PLN02756 117 LEP 119 (418)
T ss_pred cCC
Confidence 976
|
|
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0066 Score=68.87 Aligned_cols=159 Identities=19% Similarity=0.267 Sum_probs=97.1
Q ss_pred cceeeccCceEEEEEEEC--CeEEEEEEecCC------CCCChhhHHHHHHHHHhcC--CC-cceeEeceecCceEEEEE
Q 003033 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH------SLQGPSEFQQEIDILSKIR--HP-NLVTLVGACPEVWTLVYE 601 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~------~~~~~~~f~~Ei~iL~~l~--Hp-nIV~l~g~~~~~~~LV~E 601 (855)
...||.|.-.-||++... +..|+||.-.+. ..-...+..-|.++|+.+. -| ++.++|.+-++...+|||
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vME 113 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVME 113 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHH
Confidence 456899999999999875 567999975432 1223556777889888774 34 466677776777778999
Q ss_pred ecCCCC-HHHHhcccCCCCCCC---------------------------------------------------H------
Q 003033 602 YLPNGS-LEDRLSCKDNSPPLS---------------------------------------------------W------ 623 (855)
Q Consensus 602 y~~~Gs-L~~~L~~~~~~~~l~---------------------------------------------------~------ 623 (855)
|++... |.+.|......+.+. -
T Consensus 114 dL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~~~kk~~v~~f~N~eLc~itedlvft~Py~~~~~~n~~ 193 (409)
T PRK12396 114 DLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKKELVKNYINPELCEITEDLVYAEPFTNHNKRNEL 193 (409)
T ss_pred hCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccChHHHHHhhHhcCCHHHHHHhcccccccCcccchhccCC
Confidence 986532 333321110000000 0
Q ss_pred -H-HHHHHHH---------HHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHH
Q 003033 624 -Q-TRIRIAT---------ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIIL 692 (855)
Q Consensus 624 -~-~~~~i~~---------qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl 692 (855)
. ..-.+.. .-+..|.+.--.+...++|+||.|.||+++.+ ..|+.|.|+...|+.+ |-+|.++
T Consensus 194 ~~~~~~~~~~~l~~D~~Lk~ev~~Lk~~F~~~~~aLlHGDlHtGSI~v~~~-~~kvIDpEFAfyGP~g-----FDiG~~l 267 (409)
T PRK12396 194 FPLNEGWIREHIYSDKELRLEVAKLKFSFMTNAQALIHGDLHTGSVFVKND-STKVIDPEFAFYGPMG-----YDIGNVM 267 (409)
T ss_pred CChhhHHHHHHHhcCHHHHHHHHHHHHHHHhcchhhccCcCCCCCEEecCC-ceEEEcccccccCCcH-----HHHHHHH
Confidence 0 0000000 00111222211233568999999999999976 4899999998888765 4567777
Q ss_pred HHHHh
Q 003033 693 LRLLT 697 (855)
Q Consensus 693 ~ellt 697 (855)
.-|+.
T Consensus 268 anll~ 272 (409)
T PRK12396 268 ANLMF 272 (409)
T ss_pred HHHHH
Confidence 76655
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.00059 Score=79.53 Aligned_cols=166 Identities=18% Similarity=0.140 Sum_probs=108.8
Q ss_pred hhcccCCccccceeeccCceEEEEEEECCe-EEEEEEecCCCCCChhhHHHHHHHHHhcCCCc-ceeEeceec--CceEE
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACP--EVWTL 598 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~~~-~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-IV~l~g~~~--~~~~L 598 (855)
++..+..+...+-+++|+++.+||.+-..+ ....+.+. ......-++++|.+++||| .+..++.+. +...+
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs-----~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVS-----QTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeec-----cchhhHHHHHHHHHccCCCCcccccccCCcccccch
Confidence 344455566666789999999998765432 22234432 2244566899999999999 677777663 35678
Q ss_pred EEEecCCC-CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc----
Q 003033 599 VYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---- 673 (855)
Q Consensus 599 V~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~---- 673 (855)
+++|+.+| +-..... .....+...+...+.+.-..+|++||+ -.-+||| |||... +..|..||+.
T Consensus 312 ~~~i~s~~rs~~~~~~--~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L 381 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMT--VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQL 381 (829)
T ss_pred hhhhhcCCccccccCC--hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCccc
Confidence 99999877 2221110 011123333445566667788999998 2348998 888765 5678888853
Q ss_pred --------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 003033 674 --------------------LASGELTPKSDVYSFGIILLRLLTGRPALG 703 (855)
Q Consensus 674 --------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~ 703 (855)
...+.+..+.|+|++|+--.+|.-|-+|-.
T Consensus 382 ~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 382 TRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 223345567899999988888888877754
|
|
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.042 Score=61.44 Aligned_cols=154 Identities=16% Similarity=0.264 Sum_probs=89.3
Q ss_pred eeeccCceEEEEEEECC-----eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEecCCCCH
Q 003033 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSL 608 (855)
Q Consensus 535 ~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey~~~GsL 608 (855)
.|..|-...+|+....+ ..|.+|+...... ..-.-.+|..++..+..-++ .++++++.+. +|.+|+++-+|
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G--~i~~fi~g~~l 97 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFGNG--MIQSFINARTL 97 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeCCc--EeehhhcCCCC
Confidence 45446677888876553 2788998765432 22233579999998864444 3556666433 58999977654
Q ss_pred HH--------------H---hcccCC---CCCCCHHHHHHHHHHH----------------------HHHHHHHhh----
Q 003033 609 ED--------------R---LSCKDN---SPPLSWQTRIRIATEL----------------------CSVLIFLHS---- 642 (855)
Q Consensus 609 ~~--------------~---L~~~~~---~~~l~~~~~~~i~~qi----------------------a~aL~yLH~---- 642 (855)
.. . |+.... ..+-.|.....+..++ ..-+..+..
T Consensus 98 ~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 177 (330)
T PLN02421 98 TPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEITDS 177 (330)
T ss_pred ChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHhcc
Confidence 21 1 111110 0112344333332222 111111111
Q ss_pred -cCCCCceecccccCceeeCC-CCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 643 -CKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 643 -~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
..+.-+.|.||-+.|||++. ++.++++|||++..+.. .|-+|..+.|..
T Consensus 178 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~-----~fDIa~~f~E~~ 228 (330)
T PLN02421 178 LKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYR-----GYDIGNHFNEYA 228 (330)
T ss_pred CCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCcc-----HHHHHHHHHHHc
Confidence 12234799999999999974 57899999999775543 466787877763
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 855 | ||||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-43 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-43 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-43 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-40 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-35 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-35 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-31 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-31 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 8e-18 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-17 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 3e-17 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 3e-17 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 9e-16 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 1e-15 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-15 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 2e-15 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 5e-15 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 1e-14 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-14 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-14 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-14 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-14 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-14 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-14 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-14 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-14 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-14 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-14 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-14 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-14 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 3e-14 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-14 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 4e-14 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 4e-14 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-14 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 4e-14 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-14 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 4e-14 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 5e-14 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 5e-14 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-14 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 6e-14 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 6e-14 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 7e-14 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 8e-14 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 8e-14 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 8e-14 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 8e-14 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-14 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-14 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 9e-14 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-14 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 9e-14 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-14 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-13 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-13 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-13 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-13 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-13 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-13 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-13 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-13 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-13 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-13 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 5e-13 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-13 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 6e-13 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 6e-13 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-13 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 7e-13 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 7e-13 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-12 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-12 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-12 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 1e-12 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 1e-12 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 2e-12 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-12 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 3e-12 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-12 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-12 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 4e-12 | ||
| 1t1h_A | 78 | Nmr Solution Structure Of The U Box Domain From Atp | 4e-12 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 4e-12 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-12 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 6e-12 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 6e-12 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-12 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 6e-12 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 7e-12 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-12 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 7e-12 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 7e-12 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 7e-12 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 7e-12 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 7e-12 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 7e-12 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 8e-12 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 8e-12 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 8e-12 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 9e-12 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-11 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-11 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-11 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-11 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 2e-11 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-11 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-11 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-11 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-11 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-11 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 3e-11 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-11 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 3e-11 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 4e-11 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 4e-11 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 5e-11 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 5e-11 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 5e-11 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 5e-11 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 5e-11 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 9e-11 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-10 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-10 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 1e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-10 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 1e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-10 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-10 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 2e-10 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-10 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-10 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-10 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-10 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-10 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 2e-10 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-10 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-10 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 4e-10 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-10 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-10 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 4e-10 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-10 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 4e-10 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 4e-10 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 4e-10 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-10 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 5e-10 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 5e-10 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 5e-10 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 5e-10 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 5e-10 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 5e-10 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-10 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 5e-10 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-10 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 5e-10 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-10 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 6e-10 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 6e-10 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 6e-10 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 6e-10 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 6e-10 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-10 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 6e-10 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 6e-10 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 7e-10 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 7e-10 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 7e-10 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 7e-10 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 7e-10 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 8e-10 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 8e-10 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 8e-10 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 8e-10 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 8e-10 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 8e-10 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 8e-10 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 8e-10 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 8e-10 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 9e-10 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 9e-10 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 9e-10 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 9e-10 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 1e-09 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 1e-09 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-09 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-09 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 1e-09 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 1e-09 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 1e-09 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 1e-09 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 1e-09 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-09 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 1e-09 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-09 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-09 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 1e-09 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-09 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 1e-09 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-09 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 2e-09 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-09 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-09 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-09 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-09 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-09 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-09 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-09 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-09 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-09 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-09 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-09 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-09 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-09 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 2e-09 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-09 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-09 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-09 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-09 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-09 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-09 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-09 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-09 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-09 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-09 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-09 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 3e-09 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-09 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-09 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 3e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 3e-09 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-09 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 3e-09 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-09 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 3e-09 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-09 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-09 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-09 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-09 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-09 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 4e-09 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-09 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 4e-09 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-09 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-09 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 4e-09 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 4e-09 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-09 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 4e-09 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 4e-09 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 4e-09 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 4e-09 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 4e-09 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-09 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-09 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 5e-09 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 5e-09 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-09 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 5e-09 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 5e-09 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-09 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 5e-09 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 5e-09 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 5e-09 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 5e-09 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 6e-09 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-09 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 6e-09 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 6e-09 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 6e-09 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 6e-09 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 6e-09 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 6e-09 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 6e-09 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 6e-09 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 7e-09 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 7e-09 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 7e-09 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 7e-09 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 7e-09 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 7e-09 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 7e-09 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 7e-09 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 7e-09 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 8e-09 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 8e-09 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 9e-09 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 9e-09 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 9e-09 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 9e-09 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 9e-09 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 9e-09 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 1e-08 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 1e-08 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-08 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-08 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-08 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-08 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 1e-08 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 1e-08 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-08 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 1e-08 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 1e-08 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-08 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-08 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 1e-08 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-08 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 1e-08 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-08 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-08 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-08 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-08 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 1e-08 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-08 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-08 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-08 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-08 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 2e-08 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 2e-08 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 2e-08 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 2e-08 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-08 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 2e-08 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-08 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-08 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 3e-08 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 3e-08 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 3e-08 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 3e-08 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 3e-08 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-08 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-08 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-08 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-08 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 4e-08 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-08 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 4e-08 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 4e-08 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-08 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 4e-08 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-08 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-08 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-08 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 4e-08 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 4e-08 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-08 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 5e-08 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 5e-08 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 8e-08 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 8e-08 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 8e-08 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 8e-08 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 9e-08 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 9e-08 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-07 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-07 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-07 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-07 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-07 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-07 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-07 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 3e-07 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-07 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-07 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 3e-07 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 3e-07 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-07 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-07 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 3e-07 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-07 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 3e-07 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 3e-07 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 3e-07 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-07 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 3e-07 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 4e-07 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 4e-07 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 4e-07 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 4e-07 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 4e-07 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 4e-07 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 5e-07 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 5e-07 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 5e-07 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-07 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 6e-07 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 6e-07 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 7e-07 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 7e-07 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 7e-07 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-07 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 7e-07 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 7e-07 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 7e-07 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 7e-07 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 8e-07 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 8e-07 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 8e-07 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 8e-07 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 8e-07 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 8e-07 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 8e-07 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 8e-07 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 8e-07 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 8e-07 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 8e-07 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 9e-07 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 9e-07 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 9e-07 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 9e-07 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 9e-07 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 9e-07 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 9e-07 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 1e-06 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 1e-06 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-06 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-06 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 1e-06 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 1e-06 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 1e-06 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 1e-06 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-06 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 1e-06 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 1e-06 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 1e-06 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-06 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 1e-06 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 1e-06 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 1e-06 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 1e-06 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 1e-06 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 1e-06 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 1e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 1e-06 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-06 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-06 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-06 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 1e-06 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 1e-06 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-06 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-06 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 1e-06 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-06 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 2e-06 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 2e-06 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 2e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-06 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-06 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 2e-06 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 2e-06 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-06 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-06 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-06 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 2e-06 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-06 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-06 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 3e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 3e-06 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 3e-06 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 3e-06 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 3e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 3e-06 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 3e-06 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 3e-06 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 3e-06 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 3e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-06 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-06 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-06 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-06 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 4e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-06 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 4e-06 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 4e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-06 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-06 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 4e-06 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 4e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 4e-06 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 4e-06 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-06 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 4e-06 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 4e-06 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 4e-06 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 4e-06 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 4e-06 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 5e-06 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-06 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 5e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-06 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-06 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-06 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 7e-06 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 8e-06 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 8e-06 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 8e-06 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 8e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 8e-06 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 8e-06 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 9e-06 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 9e-06 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 9e-06 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 9e-06 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-05 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 1e-05 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 1e-05 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 1e-05 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-05 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 1e-05 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 1e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-05 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-05 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 1e-05 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-05 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 2e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-05 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 2e-05 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-05 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 2e-05 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 2e-05 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 2e-05 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 2e-05 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 2e-05 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 2e-05 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 2e-05 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 2e-05 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 2e-05 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 2e-05 | ||
| 2oxq_C | 80 | Structure Of The Ubch5 :chip U-Box Complex Length = | 2e-05 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 2e-05 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 2e-05 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 2e-05 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 2e-05 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-05 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-05 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 2e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-05 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 2e-05 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 2e-05 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 2e-05 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-05 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-05 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-05 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 2e-05 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-05 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 3e-05 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 3e-05 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 3e-05 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-05 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 3e-05 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 3e-05 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 4e-05 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 4e-05 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 5e-05 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 5e-05 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 5e-05 | ||
| 2f42_A | 179 | Dimerization And U-Box Domains Of Zebrafish C-Termi | 5e-05 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 6e-05 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 6e-05 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 6e-05 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 6e-05 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 7e-05 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 7e-05 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 7e-05 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 7e-05 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 7e-05 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 7e-05 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 8e-05 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 8e-05 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 8e-05 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 8e-05 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 9e-05 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 9e-05 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 1e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 1e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 1e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 1e-04 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 1e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 1e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 1e-04 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 1e-04 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-04 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 1e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 1e-04 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-04 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 1e-04 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-04 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-04 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-04 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-04 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-04 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-04 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-04 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 2e-04 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 2e-04 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 3e-04 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-04 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 3e-04 | ||
| 2c2l_A | 281 | Crystal Structure Of The Chip U-Box E3 Ubiquitin Li | 3e-04 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 5e-04 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 5e-04 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-04 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-04 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 5e-04 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-04 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 5e-04 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 6e-04 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 6e-04 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 7e-04 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 7e-04 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 7e-04 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 7e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 8e-04 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 8e-04 | ||
| 2c2v_S | 78 | Crystal Structure Of The Chip-Ubc13-Uev1a Complex L | 8e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 9e-04 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 9e-04 |
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1T1H|A Chain A, Nmr Solution Structure Of The U Box Domain From Atpub14, An Armadillo Repeat Containing Protein From Arabidopsis Thaliana Length = 78 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|2OXQ|C Chain C, Structure Of The Ubch5 :chip U-Box Complex Length = 80 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2F42|A Chain A, Dimerization And U-Box Domains Of Zebrafish C-Terminal Of Hsp70 Interacting Protein Length = 179 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2C2L|A Chain A, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase Length = 281 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2C2V|S Chain S, Crystal Structure Of The Chip-Ubc13-Uev1a Complex Length = 78 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 8e-88
Identities = 106/298 (35%), Positives = 157/298 (52%), Gaps = 52/298 (17%)
Query: 518 FSFSEIEGATHNFDPSL------KIGEGGYGSIYKGLLRHMQVAIKMLHPH----SLQGP 567
FSF E++ T+NFD K+GEGG+G +YKG + + VA+K L + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 568 SEFQQEIDILSKIRHPNLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQT 625
+F QEI +++K +H NLV L+G + LVY Y+PNGSL DRLSC D +PPLSW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------- 671
R +IA + + FLH + +H D+K ANILLD F +K+SDF
Sbjct: 135 RCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 672 -------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL------ 712
E L GE+TPKSD+YSFG++LL ++TG PA+ +E Q L
Sbjct: 192 TSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 713 --DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768
+ +++ +D D E + ++A +C + RP++ V ++L+ M AS
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK-KVQQLLQEMTAS 307
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 4e-87
Identities = 107/305 (35%), Positives = 159/305 (52%), Gaps = 46/305 (15%)
Query: 501 SRKEASSSSHMPQFFS-DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKM 558
S +A SSS++ F S ++E AT+NFD IG G +G +YKG+LR +VA+K
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKD 616
P S QG EF+ EI+ LS RHP+LV+L+G C E L+Y+Y+ NG+L+ L D
Sbjct: 71 RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
Query: 617 N-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---- 671
+ +SW+ R+ I L +LH+ +I+H D+K NILLD NFV K++DF
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK 187
Query: 672 -----------------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE- 707
E+ G LT KSDVYSFG++L +L R A+ +
Sbjct: 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
Query: 708 -----VQYA---LDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758
++A + G+L+ ++DP LA + + A++C +S + RP +G DV
Sbjct: 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMG-DV 306
Query: 759 WRVLE 763
LE
Sbjct: 307 LWKLE 311
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 2e-76
Identities = 96/290 (33%), Positives = 146/290 (50%), Gaps = 46/290 (15%)
Query: 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGP-SEFQQEID 575
FS E++ A+ NF +G GG+G +YKG L VA+K L QG +FQ E++
Sbjct: 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79
Query: 576 ILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATE 632
++S H NL+ L G C LVY Y+ NGS+ L ++ PPL W R RIA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 633 LCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
L +LH C P I+H D+K ANILLD F + + DF
Sbjct: 140 SARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 198
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE--------VQYA---LDT 714
E+L++G+ + K+DV+ +G++LL L+TG+ A + + + + L
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 715 GKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763
KL+ L+D L G++ + EQL +A+ C + S RP++ +V R+LE
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS-EVVRMLE 307
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 2e-56
Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE 594
+G G +G + K R VAIK + S + F E+ LS++ HPN+V L GAC
Sbjct: 15 VVGRGAFGVVCKAKWRAKDVAIKQIESESERK--AFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654
LV EY GSL + L + P + + + + +LHS +P +++H DLK
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 655 PANILLDANF-VSKLSDF----------------------EFLASGELTPKSDVYSFGII 691
P N+LL A V K+ DF E + K DV+S+GII
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII 192
Query: 692 LLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKS 750
L ++T R P I + PL + P + + +L RC
Sbjct: 193 LWEVITRRKPFDEIGGPAFRIMWAVH-NGTRPPLIKNLP----KPIESLMTRCWSKDPSQ 247
Query: 751 RPELGKDVWRVLEPMRASCGGS 772
RP + +++ +++ + G+
Sbjct: 248 RPSM-EEIVKIMTHLMRYFPGA 268
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 187 bits (478), Expect = 1e-53
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 38/307 (12%)
Query: 492 VKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH 551
+K ++ F +++ + + KIG G +G++++
Sbjct: 1 MKHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG 60
Query: 552 MQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGS 607
VA+K+L EF +E+ I+ ++RHPN+V +GA P ++V EYL GS
Sbjct: 61 SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
L L L + R+ +A ++ + +LH+ P IVH +LK N+L+D + K
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVK 179
Query: 668 LSDF-------------------------EFLASGELTPKSDVYSFGIILLRLLTGR-PA 701
+ DF E L KSDVYSFG+IL L T + P
Sbjct: 180 VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
Query: 702 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 761
+ Q G K + + Q+A + C RP + +
Sbjct: 240 GNLN-PAQVVAAVGF-KCKRLEIPRNLN----PQVAAIIEGCWTNEPWKRPSF-ATIMDL 292
Query: 762 LEPMRAS 768
L P+ S
Sbjct: 293 LRPLIKS 299
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 4e-50
Identities = 61/313 (19%), Positives = 104/313 (33%), Gaps = 74/313 (23%)
Query: 501 SRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLH 560
SS D + + G +G ++K L + VA+K+
Sbjct: 3 HHHHHHSSG------VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFP 56
Query: 561 PHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWT---LVYEYLPNGSLEDRLSC 614
Q + + E+ L ++H N++ +GA V L+ + GSL D L
Sbjct: 57 IQDKQS-WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-- 113
Query: 615 KDNSPPLSWQTRIRIATELCSVLIFLHS--------CKPHSIVHGDLKPANILLDANFVS 666
+ +SW IA + L +LH KP I H D+K N+LL N +
Sbjct: 114 --KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTA 170
Query: 667 KLSDF---------------------------EFLASG-----ELTPKSDVYSFGIILLR 694
++DF E L + + D+Y+ G++L
Sbjct: 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 695 LLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754
L + A + +Y L + + M+ + +K RP L
Sbjct: 231 LASRCTAADGPVD-EYML------PFEEEIGQHPSLED--------MQEVVVHKKKRPVL 275
Query: 755 GKDVWRVLEPMRA 767
+D W+ M
Sbjct: 276 -RDYWQKHAGMAM 287
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 5e-50
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 49/271 (18%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS-------EFQQEIDILSKIRHPNL 585
+IG+GG+G ++KG + VAIK L +G + EFQ+E+ I+S + HPN+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 586 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
V L G +V E++P G L RL D + P+ W ++R+ ++ + ++ + P
Sbjct: 86 VKLYGLMHNPPRMVMEFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 646 HSIVHGDLKPANILLD-----ANFVSKLSDF----------------------EFLASGE 678
IVH DL+ NI L A +K++DF E + + E
Sbjct: 144 -PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 679 L--TPKSDVYSFGIILLRLLTGR-PALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAE 734
T K+D YSF +IL +LTG P + ++++ + + L + D P
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EGLRPTIPEDCP----P 257
Query: 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
+L N+ C K RP + + L +
Sbjct: 258 RLRNVIELCWSGDPKKRPHF-SYIVKELSEL 287
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 5e-50
Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 49/269 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS----EFQQEIDILSKIRHPNLVTLVG 590
IG GG+G +Y+ +VA+K + S +QE + + ++HPN++ L G
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
C LV E+ G L LS K + + A ++ + +LH I
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 649 VHGDLKPANILLD--------ANFVSKLSDF-----------------------EFLASG 677
+H DLK +NIL+ +N + K++DF E + +
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 678 ELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736
+ SDV+S+G++L LLTG P GI + A L P+ P E
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGID-GLAVAYGVAM-NKLALPIPSTCP----EPF 243
Query: 737 ANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
A L C SRP ++ L +
Sbjct: 244 AKLMEDCWNPDPHSRPSF-TNILDQLTTI 271
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 8e-49
Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 47/267 (17%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC 592
+IG G +G++YKG H VA+KML+ + F+ E+ +L K RH N++ +G
Sbjct: 31 RIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+V ++ SL L + + I IA + + +LH+ I+H
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 652 DLKPANILLDANFVSKLSDF---------------------------EFLASGELTP--- 681
DLK NI L + K+ DF E + + P
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 682 KSDVYSFGIILLRLLTGR-PALGIT--KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
+SDVY+FGI+L L+TG+ P I ++ + G L L + + P +++
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP----KRMKR 260
Query: 739 LAMRCCEMSRKSRPELGKDVWRVLEPM 765
L C + R RP + +E +
Sbjct: 261 LMAECLKKKRDERPSF-PRILAEIEEL 286
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 5e-48
Identities = 49/262 (18%), Positives = 103/262 (39%), Gaps = 39/262 (14%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC 592
K+ E G ++KG + + +K+L +F +E L HPN++ ++GAC
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 593 --PEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
P + ++P GSL + L + + + ++ A ++ + FLH+ +P I
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFLHTLEP-LI 134
Query: 649 VHGDLKPANILLDANFVSKLSDF--------------------EFL---ASGELTPKSDV 685
L ++++D + +++S E L +D+
Sbjct: 135 PRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 686 YSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCC 744
+SF ++L L+T P ++ ++ + L+ L + ++ L C
Sbjct: 195 WSFAVLLWELVTREVPFADLS-NMEIGMKVA-LEGLRPTIPPGIS----PHVSKLMKICM 248
Query: 745 EMSRKSRPELGKDVWRVLEPMR 766
RP+ + +LE M+
Sbjct: 249 NEDPAKRPKF-DMIVPILEKMQ 269
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 1e-47
Identities = 55/281 (19%), Positives = 96/281 (34%), Gaps = 53/281 (18%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+G+G +G K R + +K L + F +E+ ++ + HPN++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ + EY+ G+L + K W R+ A ++ S + +LHS I+H
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIH 131
Query: 651 GDLKPANILLDANFVSKLSDF--------------------------------------- 671
DL N L+ N ++DF
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 672 EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731
E + K DV+SFGI+L ++ A L + P
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP-- 249
Query: 732 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGS 772
+ +RCC++ + RP + LE +R G
Sbjct: 250 --PSFFPITVRCCDLDPEKRPSF-VKLEHWLETLRMHLAGH 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 1e-44
Identities = 54/276 (19%), Positives = 101/276 (36%), Gaps = 60/276 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC 592
IG+G +G +Y G H +VAI+++ F++E+ + RH N+V +GAC
Sbjct: 40 LIGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
P ++ +L + +D L +IA E+ + +LH+ I+H
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV--RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 651 GDLKPANILLDANFVSKLSDF------------------------------EFLASGEL- 679
DLK N+ D V ++DF E +
Sbjct: 154 KDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 680 --------TPKSDVYSFGIILLRLLTGR-PALGITKE-VQYALDTGKLKNLLDPLAGDWP 729
+ SDV++ G I L P E + + + TG +
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM---KPNLSQIGMG 269
Query: 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
++++++ + C ++ RP + +LE +
Sbjct: 270 ----KEISDILLFCWAFEQEERPTF-TKLMDMLEKL 300
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 5e-40
Identities = 56/248 (22%), Positives = 84/248 (33%), Gaps = 64/248 (25%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI 576
+ + SE N IG G YG++YKG L VA+K+ + Q F E +I
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQ---NFINEKNI 58
Query: 577 --LSKIRHPNLVTLVGAC--------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR 626
+ + H N+ + E LV EY PNGSL L + W +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYL-LVMEYYPNGSLXKYL----SLHTSDWVSS 113
Query: 627 IRIATELCSVLIFLHSCKPHS------IVHGDLKPANILLDANFVSKLSDF--------- 671
R+A + L +LH+ P I H DL N+L+ + +SDF
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 672 ------------------------EFL-------ASGELTPKSDVYSFGIILLRLLTGRP 700
E L + D+Y+ G+I +
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 701 ALGITKEV 708
L + V
Sbjct: 234 DLFPGESV 241
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 5e-39
Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 59/225 (26%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGAC 592
+G+G YG +++G + VA+K+ + + +E ++ +RH N++ + +
Sbjct: 15 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGFIASD 71
Query: 593 -------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS--- 642
++W L+ Y GSL D L L + +RI + S L LH
Sbjct: 72 MTSRHSSTQLW-LITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 643 ---CKPHSIVHGDLKPANILLDANFVSKLSDF---------------------------- 671
KP +I H DLK NIL+ N ++D
Sbjct: 127 GTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 672 -EFL------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 709
E L + + D+++FG++L + + GI ++ +
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 3e-38
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 59/225 (26%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGAC 592
+IG+G YG ++ G R +VA+K+ + +E +I +RH N++ + A
Sbjct: 44 QIGKGRYGEVWMGKWRGEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAAD 100
Query: 593 -------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS--- 642
+++ L+ +Y NGSL D L S L ++ +++A S L LH+
Sbjct: 101 IKGTGSWTQLY-LITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 643 ---CKPHSIVHGDLKPANILLDANFVSKLSDF---------------------------- 671
KP +I H DLK NIL+ N ++D
Sbjct: 156 STQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 672 -EFLA------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 709
E L + +D+YSFG+IL + + GI +E Q
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259
|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 Length = 78 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 5e-37
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 843
E P YF CPI E+M+DP + + G TYE +++ WLD+GH+T P + L H L PN
Sbjct: 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 63
Query: 844 LRSAIQEWLQQH 855
L+S I W + +
Sbjct: 64 LKSLIALWCESN 75
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-36
Identities = 59/280 (21%), Positives = 101/280 (36%), Gaps = 66/280 (23%)
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEG 539
E L ++L + S S +P I IG+G
Sbjct: 1 EDPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQE-------SIGKG 53
Query: 540 GYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDI--LSKIRHPNLVTLVGAC----- 592
+G +++G R +VA+K+ + + +E +I +RH N++ + A
Sbjct: 54 RFGEVWRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNG 110
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS------CK 644
++W LV +Y +GSL D L N ++ + I++A S L LH K
Sbjct: 111 TWTQLW-LVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF-----------------------------EFL- 674
P +I H DLK NIL+ N ++D E L
Sbjct: 166 P-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 224
Query: 675 -----ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 709
E ++D+Y+ G++ + GI ++ Q
Sbjct: 225 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264
|
| >2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C Length = 179 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 1e-33
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 779 SEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNL 838
++ E P Y I E+M++P + G TY+ + ++ L P+T PL L
Sbjct: 97 KRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQL 156
Query: 839 VPNLALRSAIQEWLQQH 855
+PNLA++ I ++Q++
Sbjct: 157 IPNLAMKEVIDAFIQEN 173
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 3e-31
Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 50/254 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
+IG G +G ++ G LR + VA+K ++F QE IL + HPN+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 592 CPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
C + ++ +V E + G L + L +T +++ + + + +L S
Sbjct: 181 CTQKQPIY-IVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES---KCC 234
Query: 649 VHGDLKPANILLDANFVSKLSDF---------------------------EFLASGELTP 681
+H DL N L+ V K+SDF E L G +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 682 KSDVYSFGIILLRLLT-GR-PALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
+SDV+SFGI+L + G P ++ ++ + ++ G L P + + +
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG---GRLPC-----PELCPDAVFR 346
Query: 739 LAMRCCEMSRKSRP 752
L +C RP
Sbjct: 347 LMEQCWAYEPGQRP 360
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 8e-31
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 36/210 (17%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
IG+G +G + G R +VA+K + + F E +++++RH NLV L+G
Sbjct: 200 TIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
++ +V EY+ GSL D L L ++ + ++C + +L ++ VH
Sbjct: 258 EKGGLY-IVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 312
Query: 651 GDLKPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSF 688
DL N+L+ + V+K+SDF E L + + KSDV+SF
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 689 GIILLRLLT--GRPALGIT-KEVQYALDTG 715
GI+L + + P I K+V ++ G
Sbjct: 373 GILLWEIYSFGRVPYPRIPLKDVVPRVEKG 402
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-30
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 36/210 (17%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
IG+G +G + G R +VA+K + + F E +++++RH NLV L+G
Sbjct: 28 TIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
++ +V EY+ GSL D L L ++ + ++C + +L ++ VH
Sbjct: 86 EKGGLY-IVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140
Query: 651 GDLKPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSF 688
DL N+L+ + V+K+SDF E L + + KSDV+SF
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 689 GIILLRLLT--GRPALGIT-KEVQYALDTG 715
GI+L + + P I K+V ++ G
Sbjct: 201 GILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 7e-30
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 44/202 (21%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVT 587
+GEG +G + QVA+K L P S ++ ++EI+IL + H N+V
Sbjct: 28 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 588 LVGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
G C L+ E+LP+GSL++ L N ++ + +++ A ++C + +L S
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGS- 144
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLA 675
VH DL N+L+++ K+ DF E L
Sbjct: 145 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLM 202
Query: 676 SGELTPKSDVYSFGIILLRLLT 697
+ SDV+SFG+ L LLT
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-29
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 43/201 (21%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
++G+G +GS+ VA+K L +FQ+EI IL + +V
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 589 VGACPEVWT----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G LV EYLP+G L D L + + L + ++++C + +L S
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS-- 145
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
VH DL NIL+++ K++DF E L+
Sbjct: 146 -RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 677 GELTPKSDVYSFGIILLRLLT 697
+ +SDV+SFG++L L T
Sbjct: 205 NIFSRQSDVWSFGVVLYELFT 225
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 40/214 (18%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
+IG G +G ++ G +VAIK + ++ +F +E +++ K+ HP LV L G C
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ LV E++ +G L D L + + +T + + ++C + +L ++H
Sbjct: 74 EQAPIC-LVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 127
Query: 651 GDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSD 684
DL N L+ N V K+SDF E + + KSD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 685 VYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
V+SFG+++ + + P + EV + TG
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 43/201 (21%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
++G+G +GS+ VA+K L + + +F++EI+IL ++H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 589 VGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G C L+ EYLP GSL D L + + + ++ +++C + +L +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+H DL NIL++ K+ DF E L
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 677 GELTPKSDVYSFGIILLRLLT 697
+ + SDV+SFG++L L T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-29
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 45/220 (20%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
+G G +G++YKGL + VAIK L S + E E +++ + +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+G C V L+ + +P G L D + +++ + Q + ++ + +L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLED--- 135
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGE 678
+VH DL N+L+ K++DF E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 679 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
T +SDV+S+G+ + L+T +P GI E+ L+ G
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 43/201 (21%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 588
++G+G +GS+ VA+K L + + +F++EI+IL ++H N+V
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 589 VGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
G C L+ EYLP GSL D L + + + ++ +++C + +L +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 163
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+H DL NIL++ K+ DF E L
Sbjct: 164 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 222
Query: 677 GELTPKSDVYSFGIILLRLLT 697
+ + SDV+SFG++L L T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-29
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G+G +G ++ G +VAIK L P ++ P F QE ++ K+RH LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E ++ +V EY+ GSL D L + L + +A ++ S + ++ + VH
Sbjct: 250 EEPIY-IVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL+ ANIL+ N V K++DF E G T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 686 YSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+SFGI+L L T P G+ +EV ++ G
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 5e-29
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
++G G +G + G + VA+KM+ S+ EF QE + K+ HP LV G C
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 594 E---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ ++ +V EY+ NG L + L + + L + + ++C + FL S H +H
Sbjct: 74 KEYPIY-IVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIH 127
Query: 651 GDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSD 684
DL N L+D + K+SDF E + + KSD
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 685 VYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
V++FGI++ + + P T EV + G
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
++G G +G ++ G H +VA+K L S+ P F E +++ +++H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+ ++ ++ EY+ NGSL D L + L+ + +A ++ + F+ + +H
Sbjct: 79 QEPIY-IITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHR 133
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL+ ANIL+ K++DF E + G T KSDV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 686 YSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+SFGI+L ++T P G+T EV L+ G
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 49/212 (23%), Positives = 80/212 (37%), Gaps = 52/212 (24%)
Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
+G+G ++++G RH AIK+ + S P + +E ++L K+ H N+V L
Sbjct: 16 ILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 590 GACPEVWT-----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
A E T L+ E+ P GSL L N+ L + + ++ + L
Sbjct: 74 -AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-- 130
Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDF------------------------EFLAS 676
+ IVH ++KP NI+ D V KL+DF +
Sbjct: 131 -NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 677 GEL--------TPKSDVYSFGIILLRLLTGRP 700
L D++S G+ TG
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-28
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G+G +G ++ G +VAIK L P ++ P F QE ++ K+RH LV L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E ++ +V EY+ GSL D L + L + +A ++ S + ++ + VH
Sbjct: 333 EEPIY-IVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL+ ANIL+ N V K++DF E G T KSDV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 686 YSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+SFGI+L L T P G+ +EV ++ G
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG 480
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 40/214 (18%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
++G G +G + G R VAIKM+ S+ EF +E ++ + H LV L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 594 E---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ ++ ++ EY+ NG L + L ++ Q + + ++C + +L S +H
Sbjct: 90 KQRPIF-IITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 143
Query: 651 GDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSD 684
DL N L++ V K+SDF E L + + KSD
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 685 VYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+++FG+++ + + P T E + G
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-28
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 40/215 (18%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
K+G G YG +Y+G+ + + VA+K L +++ EF +E ++ +I+HPNLV L+G C
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 593 PE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ ++ E++ G+L D L + N +S + +AT++ S + +L + +
Sbjct: 286 TREPPFY-IITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEK---KNFI 340
Query: 650 HGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKS 683
H +L N L+ N + K++DF E LA + + KS
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 684 DVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
DV++FG++L + T P GI +V L+
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 435
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 51/226 (22%)
Query: 535 KIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL 585
+G+G + I+KG+ R +V +K+L F + ++SK+ H +L
Sbjct: 15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
V G C E LV E++ GSL+ L K N ++ ++ +A +L + + FL
Sbjct: 75 VLNYGVCVCGDENI-LVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEE 131
Query: 643 CKPHSIVHGDLKPANILLDA--------NFVSKLSDF---------------------E- 672
++++HG++ NILL KLSD E
Sbjct: 132 ---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 673 FLASGELTPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTG 715
L +D +SFG L + +G +P + + +
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR 234
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 4e-28
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 40/215 (18%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
K+G G YG +Y+G+ + + VA+K L +++ EF +E ++ +I+HPNLV L+G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 593 PE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ ++ E++ G+L D L + N +S + +AT++ S + +L + +
Sbjct: 79 TREPPFY-IITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEK---KNFI 133
Query: 650 HGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKS 683
H DL N L+ N + K++DF E LA + + KS
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 684 DVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
DV++FG++L + T P GI +V L+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 6e-28
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
+GEG +G +Y+G+ + + VA+K +L +F E I+ + HP++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+G E W ++ E P G L L + N L T + + ++C + +L S
Sbjct: 79 IGIIEEEPTW-IIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---I 132
Query: 647 SIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELT 680
+ VH D+ NIL+ + KL DF E + T
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 681 PKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
SDV+ F + + +L+ +P + K+V L+ G
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 7e-28
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 43/218 (19%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
IGEG +G +++G+ + VAIK S +F QE + + HP++V L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+G E VW ++ E G L L + L + I A +L + L +L S
Sbjct: 82 IGVITENPVW-IIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES---K 135
Query: 647 SIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELT 680
VH D+ N+L+ +N KL DF E + T
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 681 PKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
SDV+ FG+ + +L +P G+ +V ++ G
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 233
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 8e-28
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 38/213 (17%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
K+G G +G ++ H +VA+K + P S+ F E +++ ++H LV L
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 594 E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+ ++ ++ E++ GSL D L D I + ++ + F+ + +H
Sbjct: 254 KEPIY-IITEFMAKGSLLDFLK-SDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHR 308
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL+ ANIL+ A+ V K++DF E + G T KSDV
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 686 YSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+SFGI+L+ ++T P G++ EV AL+ G
Sbjct: 369 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 401
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 9e-28
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
+++G G +GS+ +G+ R + VAIK+L E +E I+ ++ +P +V L
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+G C + LV E G L L + + ++ + +L
Sbjct: 76 IGVCQAEALM-LVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEE---K 129
Query: 647 SIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGE 678
+ VH DL N+LL +K+SDF E + +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 679 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+ +SDV+S+G+ + L+ +P + EV ++ G
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 229
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 64/304 (21%), Positives = 113/304 (37%), Gaps = 57/304 (18%)
Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLH 560
S+ P+ I ++ + IG G +G +Y G L + A+K L+
Sbjct: 3 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 62
Query: 561 P-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSLEDRLSCKD 616
+ S+F E I+ HPN+++L+G C Y+ +G L + + ++
Sbjct: 63 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RN 120
Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----- 671
+ + + I ++ + +L S VH DL N +LD F K++DF
Sbjct: 121 ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 177
Query: 672 ------------------------EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT 705
E L + + T KSDV+SFG++L L+T P +
Sbjct: 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237
Query: 706 -KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP---ELGKDVWRV 761
++ L G L P + L + ++C + RP EL + +
Sbjct: 238 TFDITVYLLQG---RRLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
Query: 762 LEPM 765
Sbjct: 290 FSTF 293
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 48/223 (21%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
IG+G +G +Y G +Q AIK L +Q F +E ++ + HPN++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 589 VGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
+G ++ Y+ +G L + + + + I ++ + +L
Sbjct: 88 IGIMLPPEGLPH-VLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYLAE-- 142
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF-----------------------------EFLA 675
VH DL N +LD +F K++DF E L
Sbjct: 143 -QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 676 SGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+ T KSDV+SFG++L LLT P I ++ + L G
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-27
Identities = 59/273 (21%), Positives = 90/273 (32%), Gaps = 59/273 (21%)
Query: 535 KIGEGGYGSIYKGL---LRHMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL-- 588
I GG G IY L + V +K L E L+++ HP++V +
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 589 VGACPEVWT-----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
+ +V EY+ SL+ L I E+ L +LHS
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKG-----QKLPVAEAIAYLLEILPALSYLHS- 200
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF----------------EFL----ASGELTPKS 683
+V+ DLKP NI+L + KL D F T +
Sbjct: 201 --IGLVYNDLKPENIMLTEEQL-KLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVAT 257
Query: 684 DVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA-EQLANLAMR 742
D+Y+ G L L P G+ +D L D P ++ + L R
Sbjct: 258 DIYTVGRTLAALTLDLPT-----------RNGR---YVDGLPEDDPVLKTYDSYGRLLRR 303
Query: 743 CCEMSRKSRP----ELGKDVWRVLEPMRASCGG 771
+ + R E+ + VL + A G
Sbjct: 304 AIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTG 336
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIK--MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+IG G + ++YKGL ++VA + F++E ++L ++HPN+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
+ LV E + +G+L+ L + + ++ L FLH+
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHTRT 149
Query: 645 PHSIVHGDLKPANILLDA-NFVSKLSDF------------------EFLA----SGELTP 681
P I+H DLK NI + K+ D EF+A +
Sbjct: 150 P-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDE 208
Query: 682 KSDVYSFGIILLRLLTGRP 700
DVY+FG+ +L + T
Sbjct: 209 SVDVYAFGMCMLEMATSEY 227
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 44/196 (22%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLV 586
K+G+G +G + +G + VA+K L P L P +F +E++ + + H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 587 TLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
L G + +V E P GSL DRL + + T R A ++ + +L S
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+H DL N+LL + K+ DF E L +
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 677 GELTPKSDVYSFGIIL 692
+ SD + FG+ L
Sbjct: 199 RTFSHASDTWMFGVTL 214
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-27
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 45/220 (20%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
+G G +G++YKGL + VAIK L S + E E +++ + +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+G C V L+ + +P G L D + +++ + Q + ++ + +L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLED--- 135
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGE 678
+VH DL N+L+ K++DF E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 679 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
T +SDV+S+G+ + L+T +P GI E+ L+ G
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 46/202 (22%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
+GEG +G + VA+K L Q S ++QEIDIL + H +++
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 588 LVGAC----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
G C LV EY+P GSL D L +S L+ + A ++C + +LH+
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQL--LLFAQQICEGMAYLHAQ 153
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLA 675
+H DL N+LLD + + K+ DF E L
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 210
Query: 676 SGELTPKSDVYSFGIILLRLLT 697
+ SDV+SFG+ L LLT
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 55/251 (21%), Positives = 89/251 (35%), Gaps = 53/251 (21%)
Query: 498 LRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIY--KGLLRHMQVA 555
+ S SS + F + ++ K+GEGG+ + +GL A
Sbjct: 1 MGSSHHHHHHSS--GRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYA 58
Query: 556 IKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-------PEVWTLVYEYLPNGSL 608
+K + H Q E Q+E D+ HPN++ LV C E W L+ + G+L
Sbjct: 59 LKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW-LLLPFFKRGTL 117
Query: 609 EDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
+ + KD L+ + + +C L +H+ H DLKP NILL
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPV 174
Query: 668 LSDF--------------EFLASGEL-----TP------------------KSDVYSFGI 690
L D + L + T ++DV+S G
Sbjct: 175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGC 234
Query: 691 ILLRLLTGRPA 701
+L ++ G
Sbjct: 235 VLYAMMFGEGP 245
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 2e-27
Identities = 49/212 (23%), Positives = 80/212 (37%), Gaps = 52/212 (24%)
Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
+G+G ++++G RH AIK+ + S P + +E ++L K+ H N+V L
Sbjct: 16 ILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 590 GACPEVWT-----LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
A E T L+ E+ P GSL L N+ L + + ++ + L
Sbjct: 74 -AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-- 130
Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDF------------------------EFLAS 676
+ IVH ++KP NI+ D V KL+DF +
Sbjct: 131 -NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 677 GEL--------TPKSDVYSFGIILLRLLTGRP 700
L D++S G+ TG
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 4e-27
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 45/220 (20%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVT 587
+G G +G+++KG+ + V IK++ Q + + + H ++V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 588 LVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+G CP + LV +YLP GSL D + + + L Q + ++ + +L
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAKGMYYLEE--- 133
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGE 678
H +VH +L N+LL + +++DF E + G+
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 679 LTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
T +SDV+S+G+ + L+T P G+ EV L+ G
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG 233
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 9e-27
Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 51/255 (20%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
IGEG +G +++G+ M VAIK S +F QE + + HP++V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+G E VW ++ E G L L + L + I A +L + L +L S
Sbjct: 457 IGVITENPVW-IIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES---K 510
Query: 647 SIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELT 680
VH D+ N+L+ +N KL DF E + T
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 681 PKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
SDV+ FG+ + +L +P G+ +V ++ G L P L
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---ERLPM-----PPNCPPTLY 622
Query: 738 NLAMRCCEMSRKSRP 752
+L +C RP
Sbjct: 623 SLMTKCWAYDPSRRP 637
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 43/195 (22%)
Query: 535 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTL 588
IG G G + G LR + VAIK L + + +F E I+ + HPN++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
G +V EY+ NGSL+ L + + + + + + + + +L
Sbjct: 116 EGVVTRGRLAM-IVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSD--- 169
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASG 677
VH DL N+L+D+N V K+SDF E +A
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 678 ELTPKSDVYSFGIIL 692
+ SDV+SFG+++
Sbjct: 230 TFSSASDVWSFGVVM 244
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 50/228 (21%)
Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVT 587
+GEG +GS+ +G L+ ++VA+K + S + EF E + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 588 LVGAC----PEVWTLVY---EYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSVL 637
L+G C + ++ G L L + + QT ++ ++ +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------- 671
+L + + +H DL N +L + ++DF
Sbjct: 161 EYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
E LA T KSDV++FG+ + + T P G+ E+ L G
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 44/196 (22%)
Query: 535 KIGEGGYGSIYKGLLR------HMQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVT 587
IG G +G +YKG+L+ + VAIK L + + +F E I+ + H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 588 LVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
L G + + ++ EY+ NG+L+ L ++ S + + + + + +L +
Sbjct: 111 LEGVISKYKPMM-IITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYLAN-- 165
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLAS 676
+ VH DL NIL+++N V K+SDF E ++
Sbjct: 166 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 677 GELTPKSDVYSFGIIL 692
+ T SDV+SFGI++
Sbjct: 225 RKFTSASDVWSFGIVM 240
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 52/207 (25%)
Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
++GEG +G ++ M VA+K L +L +FQ+E ++L+ ++H ++V
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRIATE 632
G C + +V+EY+ +G L L + L + IA++
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------- 671
+ S +++L S VH DL N L+ AN + K+ DF
Sbjct: 142 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 672 ------EFLASGELTPKSDVYSFGIIL 692
E + + T +SDV+SFG+IL
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVIL 225
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-26
Identities = 63/295 (21%), Positives = 110/295 (37%), Gaps = 54/295 (18%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQ 553
+ S+ P+ I ++ + IG G +G +Y G L +
Sbjct: 60 GANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIH 119
Query: 554 VAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSLE 609
A+K L+ + S+F E I+ HPN+++L+G C Y+ +G L
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 610 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669
+ + ++ + + + I ++ + FL S VH DL N +LD F K++
Sbjct: 180 NFI--RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVA 234
Query: 670 DF-----------------------------EFLASGELTPKSDVYSFGIILLRLLT--G 698
DF E L + + T KSDV+SFG++L L+T
Sbjct: 235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 294
Query: 699 RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 752
P + ++ L G L P + L + ++C + RP
Sbjct: 295 PPYPDVNTFDITVYLLQG---RRLLQ-----PEYCPDPLYEVMLKCWHPKAEMRP 341
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-26
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 46/221 (20%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTL 588
+G G +G + G L + + VAIK L ++ + +F E I+ + HPN++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
G + V +V EY+ NGSL+ L + + + + + + S + +L
Sbjct: 112 EGVVTKSKPVM-IVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSD--- 165
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASG 677
VH DL NIL+++N V K+SDF E +A
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 678 ELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+ T SDV+S+GI+L +++ RP ++ ++V A+D G
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 2e-26
Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 21/175 (12%)
Query: 535 KIGEGGYGSIYKG----LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
G ++ L R QVA+ + P + E LS+I P +
Sbjct: 38 FHGGVPPLQFWQALDTALDR--QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95
Query: 588 L--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
+ V +V E++ GSL++ + P IR L + H
Sbjct: 96 VLDVVHTRAGGLVVAEWIRGGSLQEVAD----TSPSPVGA-IRAMQSLAAAADAAHR--- 147
Query: 646 HSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ P+ + + + L+ + + P+ D+ G L LL R
Sbjct: 148 AGVALSIDHPSRVRVSIDGDVVLAYPATMP--DANPQDDIRGIGASLYALLVNRW 200
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLV 589
KIG G + +Y+ + VA+K + L +EID+L ++ HPN++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 590 GACPEVWTL--VYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+ E L V E G L + K + +T + +LCS L +HS
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---R 155
Query: 647 SIVHGDLKPANILLDANFVSKLSDF----EFLASGEL------TP--------------- 681
++H D+KPAN+ + A V KL D F + TP
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 215
Query: 682 KSDVYSFGIILLRLLTGRPA 701
KSD++S G +L + +
Sbjct: 216 KSDIWSLGCLLYEMAALQSP 235
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-26
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 59/278 (21%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL- 588
K+G GG ++Y + +++VAIK + + F++E+ S++ H N+V++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
V + + LV EY+ +L + + ++ PLS T I ++ + H
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD---MR 131
Query: 648 IVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTP 681
IVH D+KP NIL+D+N K+ DF E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 682 KSDVYSFGIILLRLLTGRP------ALGI-TKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734
+D+YS GI+L +L G P A+ I K +Q ++ + + D P +
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-----VTTDVRKDIP----Q 242
Query: 735 QLANLAMRCCEMSRKSRP----ELGKDVWRVLEPMRAS 768
L+N+ +R E + +R E+ D+ VL RA+
Sbjct: 243 SLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN 280
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-26
Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 51/229 (22%)
Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNLVTL 588
IGEG +G + K ++ M AIK + S +F E+++L K+ HPN++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 589 VGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRIATEL 633
+GAC L EY P+G+L D L + LS Q + A ++
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------- 671
+ +L +H DL NIL+ N+V+K++DF
Sbjct: 152 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 208
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
E L T SDV+S+G++L +++ G P G+T E+ L G
Sbjct: 209 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 56/269 (20%), Positives = 104/269 (38%), Gaps = 62/269 (23%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
++GEG +G ++ + M VA+K L S +FQ+E ++L+ ++H ++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 588 LVGACPEV--WTLVYEYLPNGSLEDRL------------SCKDNSPPLSWQTRIRIATEL 633
G C E +V+EY+ +G L L PL + +A+++
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------- 671
+ +++L VH DL N L+ V K+ DF
Sbjct: 168 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 672 -----EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDP 723
E + + T +SDV+SFG++L + T +P ++ E + G L+
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG---RELER 281
Query: 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRP 752
P ++ + C + + R
Sbjct: 282 -----PRACPPEVYAIMRGCWQREPQQRH 305
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 4e-26
Identities = 63/302 (20%), Positives = 120/302 (39%), Gaps = 59/302 (19%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
++G+G +G +Y+G+ + +VAIK ++ S++ EF E ++ + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 587 TLVGACPEV--WTLVYEYLPNGSLED-------RLSCKDNSPPLSWQTRIRIATELCSVL 637
L+G + ++ E + G L+ ++ P S I++A E+ +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------- 671
+L++ + VH DL N ++ +F K+ DF
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGD 727
E L G T SDV+SFG++L + T +P G++ ++V + G LLD
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GLLDK---- 261
Query: 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPP 787
P + L L C + + K RP ++ ++ S+ E + P
Sbjct: 262 -PDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIKEEMEPGFREVSFYYSEENKLPEPE 319
Query: 788 YF 789
Sbjct: 320 EL 321
|
| >2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus} Length = 85 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 5e-26
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 780 EERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV 839
+ + P F P+ +M DP G + + L + T P L L
Sbjct: 6 IDYSDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNSP-TDPFNRQMLTESMLE 64
Query: 840 PNLALRSAIQEWLQQH 855
P L+ IQ W+++
Sbjct: 65 PVPELKEQIQAWMREK 80
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 6e-26
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 42/219 (19%)
Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLVTLV 589
++G G +GS+ +G+ R + VAIK+L E +E I+ ++ +P +V L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 590 GAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
G C E LV E G L L + + ++ + +L +
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEE---KNF 457
Query: 649 VHGDLKPANILLDANFVSKLSDF----------------------------EFLASGELT 680
VH +L N+LL +K+SDF E + + +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 681 PKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGK 716
+SDV+S+G+ + L+ +P + EV ++ GK
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 7e-26
Identities = 51/229 (22%), Positives = 91/229 (39%), Gaps = 51/229 (22%)
Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVT 587
+G+G +GS+ + L+ ++VA+KML + EF +E + + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 588 LVGAC----PEVWT----LVYEYLPNGSLEDRL---SCKDNSPPLSWQTRIRIATELCSV 636
LVG + ++ ++ +G L L +N L QT +R ++
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------------- 671
+ +L S + +H DL N +L + ++DF
Sbjct: 150 MEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
E LA T SDV++FG+ + ++T P GI E+ L G
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 46/219 (21%), Positives = 82/219 (37%), Gaps = 59/219 (26%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEF-----------------QQEIDIL 577
+ +G + I + A+K L+ +F + E+ I+
Sbjct: 38 TLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 578 SKIRHPNLVTLVGACPEVWT------LVYEYLPNGSLEDRLSC-----KDNSPPLSWQTR 626
+ I++ +T + T ++YEY+ N S+ K+ + + Q
Sbjct: 98 TDIKNEYCLTCE----GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVI 153
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------- 671
I + + ++H+ K +I H D+KP+NIL+D N KLSDF
Sbjct: 154 KCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR 211
Query: 672 ---EFLA----SGELT---PKSDVYSFGIILLRLLTGRP 700
EF+ S E + K D++S GI L +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
|
| >2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B Length = 100 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-25
Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Query: 774 SYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPL 833
+ + P F P+ +M DP G + + L + T P L
Sbjct: 15 KNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSP-TDPFNRQTL 73
Query: 834 AHKNLVPNLALRSAIQEWLQQH 855
L P L+ IQ W+++
Sbjct: 74 TESMLEPVPELKEQIQAWMREK 95
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-25
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
+G G +G + + M VA+KML P L E+ +LS + H N+
Sbjct: 30 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRL---------------SCKDNSPPLSWQTRIR 628
V L+GAC ++ EY G L + L +D+ L + +
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
+ ++ + FL S +H DL NILL ++K+ DF
Sbjct: 150 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 672 ----------EFLASGELTPKSDVYSFGIIL 692
E + + T +SDV+S+GI L
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFL 237
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 3e-25
Identities = 54/227 (23%), Positives = 86/227 (37%), Gaps = 41/227 (18%)
Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL 564
SS + + F +E + KIGEG +G Q IK + S
Sbjct: 7 HSSGVDLGTENLYFQSME----KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISR 61
Query: 565 QGPSEFQ---QEIDILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSP 619
E + +E+ +L+ ++HPN+V + E +L V +Y G L R++
Sbjct: 62 MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN-AQKGV 120
Query: 620 PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLAS 676
+ ++C L +H K I+H D+K NI L + +L DF L S
Sbjct: 121 LFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
Query: 677 GEL-------TP---------------KSDVYSFGIILLRLLTGRPA 701
TP KSD+++ G +L L T + A
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 3e-25
Identities = 52/207 (25%), Positives = 79/207 (38%), Gaps = 47/207 (22%)
Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLV 589
++G GG+G + + H QVAIK E + EI I+ K+ HPN+V+
Sbjct: 21 RLGTGGFGYVLRW--IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 590 GACPEVWT---------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
P+ L EY G L L+ +N L + +++ S L +L
Sbjct: 79 -EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 641 HSCKPHSIVHGDLKPANILLDAN---FVSKLSDF------------------------EF 673
H + I+H DLKP NI+L + K+ D E
Sbjct: 138 HE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
Query: 674 LASGELTPKSDVYSFGIILLRLLTGRP 700
L + T D +SFG + +TG
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFR 221
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 4e-25
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 535 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTL 588
++G G +G++ KG + VA+K+L + E E +++ ++ +P +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 589 VGACP-EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C E W LV E G L L + + + I + ++ + +L +
Sbjct: 84 IGICEAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE---SN 137
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGEL 679
VH DL N+LL +K+SDF E + +
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 680 TPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTG 715
+ KSDV+SFG+++ + +P G+ EV L+ G
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 236
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-25
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 42/206 (20%)
Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVT 587
IG G YG K R + K L S+ +E Q E+++L +++HPN+V
Sbjct: 13 TIGTGSYGRCQKI--RRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVR 69
Query: 588 LVGACPEVWT----LVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+ +V EY G L + L + +R+ T+L L H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 643 CK--PHSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLA 675
H+++H DLKPAN+ LD KL DF E +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMN 189
Query: 676 SGELTPKSDVYSFGIILLRLLTGRPA 701
KSD++S G +L L P
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPP 215
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 6e-25
Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 52/207 (25%)
Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
+G G +G + + ++VA+KML E+ I+S + +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATE 632
V L+GAC ++ EY G L E + + S + + +++
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------- 671
+ + FL S + +H D+ N+LL V+K+ DF
Sbjct: 173 VAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 672 ------EFLASGELTPKSDVYSFGIIL 692
E + T +SDV+S+GI+L
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILL 256
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 8e-25
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 56/211 (26%)
Query: 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHP 583
+GEG +G + + VA+KML + + S+ E++++ I +H
Sbjct: 42 PLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIR 628
N++ L+GAC ++ EY G+L + L + ++++ +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
+L + +L S K +H DL N+L+ N V K++DF
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 672 ----------EFLASGELTPKSDVYSFGIIL 692
E L T +SDV+SFG+++
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 9e-25
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 40/197 (20%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+G+G +G++Y L R Q +A+K+L L+ Q E++I S +RHPN++ L
Sbjct: 17 LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 589 VG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
G L+ EY P G++ L Q TEL + L + HS
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHS---K 128
Query: 647 SIVHGDLKPANILLDANFVSKLSDF-----------------------EFLASGELTPKS 683
++H D+KP N+LL + K++DF E + K
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 684 DVYSFGIILLRLLTGRP 700
D++S G++ L G+P
Sbjct: 189 DLWSLGVLCYEFLVGKP 205
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 9e-25
Identities = 55/237 (23%), Positives = 86/237 (36%), Gaps = 59/237 (24%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
+G G +G + + VA+KML + E+ IL I H N+
Sbjct: 34 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 586 VTLVGACPEV---WTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRI 629
V L+GAC + ++ E+ G+L L L+ + I
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
+ ++ + FL S K +H DL NILL V K+ DF
Sbjct: 154 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 672 ---------EFLASGELTPKSDVYSFGIILLRLLT-GR---PALGITKEVQYALDTG 715
E + T +SDV+SFG++L + + G P + I +E L G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 58/265 (21%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
+G G +G +Y+G + +QVA+K L S Q +F E I+SK H N+V
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 587 TLVGACPEV--WTLVYEYLPNGSLED----RLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
+G + ++ E + G L+ L+ + +A ++ +L
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 641 HSCKPHSIVHGDLKPANILLDA---NFVSKLSDF-------------------------- 671
+ +H D+ N LL V+K+ DF
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGD 727
E G T K+D +SFG++L + + P + +EV + +G +DP
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG---GRMDP---- 266
Query: 728 WPFVQAEQLANLAMRCCEMSRKSRP 752
P + + +C + + RP
Sbjct: 267 -PKNCPGPVYRIMTQCWQHQPEDRP 290
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 39/199 (19%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL- 588
+G GG G +Y+ +R VA+K++ P Q+E +++ P++V +
Sbjct: 41 LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIH 100
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G + + L L PL+ + I ++ S L H+
Sbjct: 101 DFGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSALDAAHA---AG 154
Query: 648 IVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTP 681
H D+KP NIL+ A+ + L DF E + T
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATY 214
Query: 682 KSDVYSFGIILLRLLTGRP 700
++D+Y+ +L LTG P
Sbjct: 215 RADIYALTCVLYECLTGSP 233
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 53/216 (24%), Positives = 79/216 (36%), Gaps = 61/216 (28%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
+GEG +G + K H VA+KML S + E ++L ++ HP+++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRL---------------------SCKDNSPPLSW 623
L GAC L+ EY GSL L + L+
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------ 671
I A ++ + +L K +VH DL NIL+ K+SDF
Sbjct: 150 GDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 672 ---------------EFLASGELTPKSDVYSFGIIL 692
E L T +SDV+SFG++L
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-24
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 49/203 (24%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+G+G + +Y + VAIKM+ ++ Q+ E+ I +++HP+++ L
Sbjct: 19 LGKGSFAGVY--RAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 589 VGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+ LV E NG + L K+ P S ++ + +++LHS
Sbjct: 77 Y----NYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGEL------TP----------- 681
H I+H DL +N+LL N K++DF + E TP
Sbjct: 131 ---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 682 ----KSDVYSFGIILLRLLTGRP 700
+SDV+S G + LL GRP
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRP 210
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 4e-24
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 61/216 (28%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
+G G +G + +QVA+KML E+ +++++ H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSL--------------------EDRLSCKDNSPPLSW 623
V L+GAC L++EY G L + RL +++ L++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------ 671
+ + A ++ + FL VH DL N+L+ V K+ DF
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 672 ---------------EFLASGELTPKSDVYSFGIIL 692
E L G T KSDV+S+GI+L
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 5e-24
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 56/211 (26%)
Query: 535 KIGEGGYGSIYKGLLR---------HMQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHP 583
+GEG +G + +VA+KML + + S+ E++++ I +H
Sbjct: 76 PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIR 628
N++ L+GAC ++ EY G+L + L + LS + +
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
A ++ + +L S K +H DL N+L+ + V K++DF
Sbjct: 196 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 672 ----------EFLASGELTPKSDVYSFGIIL 692
E L T +SDV+SFG++L
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
|
| >1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2 Length = 98 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 5e-24
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 780 EERCEPPPYFTCPIFQEVMQDPHVAADG-FTYEAEALKGWLDSGHETSPMTNLPLAHKNL 838
E + F PI +M DP V T + + L S T P PL +
Sbjct: 14 ETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQ-TDPFNRSPLTMDQI 72
Query: 839 VPNLALRSAIQEWLQQH 855
PN L+ IQ WL +
Sbjct: 73 RPNTELKEKIQRWLAER 89
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 8e-24
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 53/224 (23%)
Query: 521 SEIEGATHNFDPSL------KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ 572
E E + DP+ ++G+G +G +YK + A K++ S + ++
Sbjct: 6 REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65
Query: 573 EIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR- 628
EI+IL+ HP +V L+GA ++W ++ E+ P G+++ + + L+ + +I+
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLW-IMIEFCPGGAVDAIM--LELDRGLT-EPQIQV 121
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELT-------- 680
+ ++ L FLHS I+H DLK N+L+ +L+DF S +
Sbjct: 122 VCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGV--SAKNLKTLQKRDS 176
Query: 681 ------------------------PKSDVYSFGIILLRLLTGRP 700
K+D++S GI L+ + P
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 8e-24
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 56/211 (26%)
Query: 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHP 583
+GEG +G + + VA+KML + + S+ E++++ I +H
Sbjct: 88 PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIR 628
N++ L+GAC ++ EY G+L + L + ++++ +
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
+L + +L S K +H DL N+L+ N V K++DF
Sbjct: 208 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 672 ----------EFLASGELTPKSDVYSFGIIL 692
E L T +SDV+SFG+++
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 295
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 9e-24
Identities = 56/265 (21%), Positives = 99/265 (37%), Gaps = 58/265 (21%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
+G G +G +Y+G + +QVA+K L S Q +F E I+SK H N+V
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 587 TLVGACPEV--WTLVYEYLPNGSLEDRL----SCKDNSPPLSWQTRIRIATELCSVLIFL 640
+G + ++ E + G L+ L L+ + +A ++ +L
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 641 HSCKPHSIVHGDLKPANILLDA---NFVSKLSDF-------------------------- 671
+ +H D+ N LL V+K+ DF
Sbjct: 198 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLT--GRPALGIT-KEVQYALDTGKLKNLLDPLAGD 727
E G T K+D +SFG++L + + P + +EV + +G +DP
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG---GRMDP---- 307
Query: 728 WPFVQAEQLANLAMRCCEMSRKSRP 752
P + + +C + + RP
Sbjct: 308 -PKNCPGPVYRIMTQCWQHQPEDRP 331
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 9e-24
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 57/210 (27%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
++GE +G +YKG L VAIK L EF+ E + ++++HPN+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 587 TLVGAC----PEVWTLVYEYLPNGSLEDRL-------------SCKDNSPPLSWQTRIRI 629
L+G P ++++ Y +G L + L + L + +
Sbjct: 76 CLLGVVTKDQP--LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
++ + + +L S H +VH DL N+L+ K+SD
Sbjct: 134 VAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 672 ---------EFLASGELTPKSDVYSFGIIL 692
E + G+ + SD++S+G++L
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 220
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 1e-23
Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 71/334 (21%)
Query: 484 LQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGS 543
+ +EA + + EA +++ PQ S + + G
Sbjct: 18 EEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSV 77
Query: 544 IYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVGACPEVWT- 597
++ A+K+ + SE + +++ + +
Sbjct: 78 VFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS 137
Query: 598 ---------------------------LVYEYLPNGSLEDRLSCKDNSP----PLSWQTR 626
L+ + LE S D
Sbjct: 138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMP-AASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------- 671
+ +L + L S +VHG P N+ + + L D
Sbjct: 197 HILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSV 253
Query: 672 -------EFLASGEL--TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 722
EFL + T + + G+ + R+ G+ + K +L
Sbjct: 254 PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI--KGSWKRPSLRV 311
Query: 723 PLAGDWPFVQA----EQLANLAMRCCEMSRKSRP 752
P F + + L R R+ R
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL 345
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 40/197 (20%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+G+G +G++Y L R Q +A+K+L L+ Q EI+I S +RHPN++ +
Sbjct: 22 LGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 589 VG--ACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+ L+ E+ P G L L Q EL L + H
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYCHE---R 133
Query: 647 SIVHGDLKPANILLDANFVSKLSDF-----------------------EFLASGELTPKS 683
++H D+KP N+L+ K++DF E + K
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKV 193
Query: 684 DVYSFGIILLRLLTGRP 700
D++ G++ L G P
Sbjct: 194 DLWCAGVLCYEFLVGMP 210
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
KIG+G G++Y + +VAI+ ++ EI ++ + ++PN+V + +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
E+W +V EYL GSL D ++ + + E L FLHS + ++
Sbjct: 87 LVGDELW-VVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 650 HGDLKPANILLDANFVSKLSDFEFLASGELT---------------------------PK 682
H D+K NILL + KL+DF F ++T PK
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGF--CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 683 SDVYSFGIILLRLLTGRP 700
D++S GI+ + ++ G P
Sbjct: 197 VDIWSLGIMAIEMIEGEP 214
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 53/211 (25%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNL--VTLV 589
+IG GG +++ L Q AIK ++ + ++ EI L+K++ + + L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+ +V E N L L K + R + + +H H
Sbjct: 95 DYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HG 147
Query: 648 IVHGDLKPANILLDANFVSKLSDF------------------------------------ 671
IVH DLKPAN L+ + KL DF
Sbjct: 148 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ +++PKSDV+S G IL + G+
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 1e-23
Identities = 41/256 (16%), Positives = 79/256 (30%), Gaps = 56/256 (21%)
Query: 498 LRKSRKEASSSSHMPQFFSDFS----FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-- 551
L K SS + ++ +E + + +GEG + +Y+
Sbjct: 31 LSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLN 90
Query: 552 -----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 604
+ +K+ P + Q ++ L + A LV E
Sbjct: 91 DAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYS 150
Query: 605 NGSLEDRLSCKDNSP--PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662
G+L + ++ N+P + I A + ++ +H C+ I+HGD+KP N +L
Sbjct: 151 YGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGN 207
Query: 663 NFVS-----------KLSDF---------------------------EFLASGELTPKSD 684
F+ L D E L++ + D
Sbjct: 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQID 267
Query: 685 VYSFGIILLRLLTGRP 700
+ + +L G
Sbjct: 268 YFGVAATVYCMLFGTY 283
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 42/198 (21%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
KIGEG G + +H QVA+KM+ Q E+ I+ +H N+V + +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
E+W ++ E+L G+L D +S L+ + + + L +LH+ ++
Sbjct: 112 LVGEELW-VLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHA---QGVI 163
Query: 650 HGDLKPANILLDANFVSKLSDFEFLASGELT---------------------------PK 682
H D+K +ILL + KLSDF F +++ +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGF--CAQISKDVPKRKSLVGTPYWMAPEVISRSLYATE 221
Query: 683 SDVYSFGIILLRLLTGRP 700
D++S GI+++ ++ G P
Sbjct: 222 VDIWSLGIMVIEMVDGEP 239
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 53/211 (25%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNL--VTLV 589
+IG GG +++ L Q AIK ++ + ++ EI L+K++ + + L
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+ +V E N L L K + R + + +H H
Sbjct: 76 DYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HG 128
Query: 648 IVHGDLKPANILLDANFVSKLSDF------------------------------------ 671
IVH DLKPAN L+ + KL DF
Sbjct: 129 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ +++PKSDV+S G IL + G+
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKT 218
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 3e-23
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 56/218 (25%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN 584
+F IG GG+G ++K +H IK + ++ + + ++E+ L+K+ H N
Sbjct: 12 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIKRV-KYNNE---KAEREVKALAKLDHVN 65
Query: 585 LVTLVGA---------------CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTR 626
+V G ++ E+ G+LE + K L
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKLDKVLA 124
Query: 627 IRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLASGEL---- 679
+ + ++ + ++HS K +++ DLKP+NI L K+ DF L +
Sbjct: 125 LELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS 181
Query: 680 --TP---------------KSDVYSFGIILLRLLTGRP 700
T + D+Y+ G+IL LL
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 47/219 (21%), Positives = 79/219 (36%), Gaps = 53/219 (24%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGA 591
+ EGG+ +Y + + + A+K L + + QE+ + K+ HPN+V A
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 592 CPEVWT---------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
L+ L G L + L ++ PLS T ++I + C + +H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF------------------------------- 671
KP I+H DLK N+LL KL DF
Sbjct: 155 QKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 672 ---------EFLASGELTPKSDVYSFGIILLRLLTGRPA 701
+ ++ + K D+++ G IL L +
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 61/216 (28%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNLV 586
IGEG +G +++ VA+KML S ++FQ+E ++++ +PN+V
Sbjct: 54 DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 587 TLVGACPEV--WTLVYEYLPNGSLEDRL---------------------SCKDNSPPLSW 623
L+G C L++EY+ G L + L PPLS
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------ 671
++ IA ++ + + +L VH DL N L+ N V K++DF
Sbjct: 174 AEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 672 ---------------EFLASGELTPKSDVYSFGIIL 692
E + T +SDV+++G++L
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-23
Identities = 53/254 (20%), Positives = 84/254 (33%), Gaps = 56/254 (22%)
Query: 482 DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGY 541
+ + + V E ++ + P+ F SF + ++G G Y
Sbjct: 21 QSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLS----------RLGHGSY 70
Query: 542 GSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQ---QEIDILSKI-RHPNLVTLVGACPEV 595
G ++K + A+K +GP + E+ K+ +HP V L A
Sbjct: 71 GEVFKVRSKEDGRLYAVKRS-MSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQA---- 125
Query: 596 WT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
W L E SL+ C+ L + L LHS +V
Sbjct: 126 WEEGGILYLQTELC-GPSLQQH--CEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLV 179
Query: 650 HGDLKPANILLDANFVSKLSDF-------------------EFLA----SGELTPKSDVY 686
H D+KPANI L KL DF ++A G +DV+
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVF 239
Query: 687 SFGIILLRLLTGRP 700
S G+ +L +
Sbjct: 240 SLGLTILEVACNME 253
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-23
Identities = 56/275 (20%), Positives = 90/275 (32%), Gaps = 62/275 (22%)
Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHN---FDPS 533
+ + R +KE + R+ S S S E + +
Sbjct: 2 HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSIL 61
Query: 534 LKIGEGGYGSIYKGLLRHMQ-VAIKM-----LHPHSLQGPSEFQQEIDILSKIRHPNL-- 585
+IG GG +++ L Q AIK +L ++ EI L+K++ +
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKI 118
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
+ L + +V E N L L K + R + + +H
Sbjct: 119 IRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ- 173
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-------------------------------- 671
H IVH DLKPAN L+ + KL DF
Sbjct: 174 --HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ +++PKSDV+S G IL + G+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 5e-23
Identities = 41/200 (20%), Positives = 72/200 (36%), Gaps = 44/200 (22%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTL 588
+G+GG+ + + A K++ L P + EI I + H ++V
Sbjct: 23 LGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 589 VGACPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
G E V+ E SL + + L+ ++ +LH
Sbjct: 81 HG-FFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHR--- 133
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELT 680
+ ++H DLK N+ L+ + K+ DF E L+ +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 681 PKSDVYSFGIILLRLLTGRP 700
+ DV+S G I+ LL G+P
Sbjct: 194 FEVDVWSIGCIMYTLLVGKP 213
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 8e-23
Identities = 47/231 (20%), Positives = 82/231 (35%), Gaps = 67/231 (29%)
Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRH 582
+F+ +G+G +G + K R+ AIK + H+ + S E+ +L+ + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNH 61
Query: 583 PNLVTLVGA------------CPEVWTLVY---EYLPNGSLEDRLSCKDNSPPLSWQTRI 627
+V A + + ++ EY NG+L D + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEYW 119
Query: 628 RIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------- 671
R+ ++ L ++HS I+H DLKP NI +D + K+ DF
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 672 --EFLASGEL------TP----------------KSDVYSFGIILLRLLTG 698
S + T K D+YS GII ++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 9e-23
Identities = 45/238 (18%), Positives = 85/238 (35%), Gaps = 52/238 (21%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----V 554
+ A + +P+ D + + +G+GG+ + +
Sbjct: 18 PGAPAAAPPAKEIPEVLVD------PRSRRRYVRGRFLGKGGFAKCF--EISDADTKEVF 69
Query: 555 AIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSL 608
A K++ L P + ++ EI I + H ++V G E V+ E SL
Sbjct: 70 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG-FFEDNDFVFVVLELCRRRSL 128
Query: 609 EDRLSCKDNSPPLS-WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
+ + L+ + R ++ +LH + ++H DLK N+ L+ + K
Sbjct: 129 LELHKRRK---ALTEPEAR-YYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVK 181
Query: 668 LSDF-------------------------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ DF E L+ + + DV+S G I+ LL G+P
Sbjct: 182 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 1e-22
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 536 IGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP 593
+G+G YG +Y G Q +AIK + + +EI + ++H N+V +G+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 594 EVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
E + E +P GSL L K + QT ++ L +LH + IVH
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHR 146
Query: 652 DLKPANILLDA-NFVSKLSDFEFLASGEL------------TP----------------- 681
D+K N+L++ + V K+SDF S L T
Sbjct: 147 DIKGDNVLINTYSGVLKISDFG--TSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 682 KSDVYSFGIILLRLLTGRP 700
+D++S G ++ + TG+P
Sbjct: 205 AADIWSLGCTIIEMATGKP 223
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 1e-22
Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 57/223 (25%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKML-HPHSLQGPSEFQQEIDILSKIRHPNL 585
+F+P +G GG+G +++ + AIK + P+ + +E+ L+K+ HP +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 586 VTLVGACPEVWT--------------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
V A E T + + +L+D ++ + + I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
++ + FLHS ++H DLKP+NI + V K+ DF
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 672 -----------------EFLASGELTPKSDVYSFGIILLRLLT 697
E + + K D++S G+IL LL
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-22
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 49/207 (23%)
Query: 535 KIGEGGYGSIYKG----LLRHMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVT 587
+G GG ++ R VA+K+L + PS F++E + + HP +V
Sbjct: 19 ILGFGGMSEVHLARDLRDHR--DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 588 L------VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
+ + +V EY+ +L D + P++ + I + + C L F H
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSH 133
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------------EF 673
+ I+H D+KPANI++ A K+ DF E
Sbjct: 134 Q---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 674 LASGELTPKSDVYSFGIILLRLLTGRP 700
+ +SDVYS G +L +LTG P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEP 217
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 3e-22
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 48/201 (23%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
K+GEG YGS+YK + + VAIK + E +EI I+ + P++V G+
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSCKPH 646
++W +V EY GS+ D + + + L T IAT L +LH
Sbjct: 94 FKNTDLW-IVMEYCGAGSVSDII--RLRNKTL---TEDEIATILQSTLKGLEYLHF---M 144
Query: 647 SIVHGDLKPANILLDANFVSKLSDFEFLASGELT-------------------------- 680
+H D+K NILL+ +KL+DF +G+LT
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGV--AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY 202
Query: 681 -PKSDVYSFGIILLRLLTGRP 700
+D++S GI + + G+P
Sbjct: 203 NCVADIWSLGITAIEMAEGKP 223
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 4e-22
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 50/210 (23%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGA 591
IG G + + +VAIK ++ Q E +EI +S+ HPN+V+ +
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 592 ---CPEVWTLVYEYLPNGSLED--RLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSC 643
E+W LV + L GS+ D + IAT E+ L +LH
Sbjct: 82 FVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK- 139
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGEL-----------------TP----- 681
+ +H D+K NILL + +++DF S L TP
Sbjct: 140 --NGQIHRDVKAGNILLGEDGSVQIADFGV--SAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 682 -----------KSDVYSFGIILLRLLTGRP 700
K+D++SFGI + L TG
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGAA 225
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 39/197 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGA 591
KIG+G +G ++KG+ Q VAIK++ + + QQEI +LS+ P + G+
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 592 ---CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
++W ++ EYL GS D L PL I E+ L +LHS
Sbjct: 89 YLKDTKLW-IIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS---EKK 140
Query: 649 VHGDLKPANILLDANFVSKLSDF-------------------------EFLASGELTPKS 683
+H D+K AN+LL + KL+DF E + K+
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 200
Query: 684 DVYSFGIILLRLLTGRP 700
D++S GI + L G P
Sbjct: 201 DIWSLGITAIELARGEP 217
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 1e-21
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 41/197 (20%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTL- 588
IG+G + + RH+ +VAIK++ L S +E+ I+ + HPN+V L
Sbjct: 23 IGKGNFAKVKLA--RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 589 -VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
V + L+ EY G + D L + + ++ S + + H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQ---KR 134
Query: 648 IVHGDLKPANILLDANFVSKLSDF---------EFL---------ASGELT-------PK 682
IVH DLK N+LLDA+ K++DF L A+ EL P+
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 683 SDVYSFGIILLRLLTGR 699
DV+S G+IL L++G
Sbjct: 195 VDVWSLGVILYTLVSGS 211
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 97.8 bits (243), Expect = 1e-21
Identities = 33/288 (11%), Positives = 77/288 (26%), Gaps = 72/288 (25%)
Query: 482 DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSF-SEIEGATHNFDPSLKIGEGG 540
+ V+ E +S ++ S+ + F SE+ +G+
Sbjct: 31 ELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQED 90
Query: 541 YGSIYKG--LLRHMQVAIKML----------------------------HPHSLQGPSEF 570
+ + + + + + F
Sbjct: 91 PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRF 150
Query: 571 QQEIDILSKIRHPNLVTLVGACPEVWTLVY---EYLPNGSLEDRL----SCKDNSPPLSW 623
D++ + ++ + ++W L +L+ S L
Sbjct: 151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVH 210
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------ 671
R+++ ++ +L LH + +VH L+P +I+LD L+ F
Sbjct: 211 HARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 672 ---------EFLAS----------GELTPKSDVYSFGIILLRLLTGRP 700
E A +T D ++ G+ + +
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 96.2 bits (239), Expect = 2e-21
Identities = 31/276 (11%), Positives = 75/276 (27%), Gaps = 72/276 (26%)
Query: 494 EAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-- 551
+E ++ + S+S SE+ +G+ + + +
Sbjct: 39 TSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETG 98
Query: 552 MQVAIKML----------------------------HPHSLQGPSEFQQEIDILSKIRHP 583
+ + + + F D++ +
Sbjct: 99 ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158
Query: 584 NLVTLVGACPEVWTLVY---EYLPNGSLEDRL----SCKDNSPPLSWQTRIRIATELCSV 636
++ + ++W L +L+ S L R+++ ++ +
Sbjct: 159 KMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 218
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------EFLA 675
L LH + +VH L+P +I+LD L+ F E A
Sbjct: 219 LASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEA 275
Query: 676 S-----------GELTPKSDVYSFGIILLRLLTGRP 700
+T D ++ G+++ +
Sbjct: 276 RRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-21
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 42/198 (21%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+G G +G + G H +VA+K+L+ ++ + EI L RHP+++ L
Sbjct: 19 LGVGTFGKVKIG--EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
V + P + +V EY+ G L D + + R+ ++ S + + H H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHR---H 130
Query: 647 SIVHGDLKPANILLDANFVSKLSDF---------EFL---------ASGELT-------P 681
+VH DLKP N+LLDA+ +K++DF EFL A+ E+ P
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 682 KSDVYSFGIILLRLLTGR 699
+ D++S G+IL LL G
Sbjct: 191 EVDIWSCGVILYALLCGT 208
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 2e-21
Identities = 47/249 (18%), Positives = 84/249 (33%), Gaps = 51/249 (20%)
Query: 488 RDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKG 547
+ K ++ D+ + E H ++G G +G +++
Sbjct: 21 SSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYRE---EVHWMTHQPRVGRGSFGEVHRM 77
Query: 548 LLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEY 602
+ Q A+K + + +E+ + + P +V L GA P V + E
Sbjct: 78 KDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVN-IFMEL 131
Query: 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662
L GSL + L + + L +LH+ + I+HGD+K N+LL +
Sbjct: 132 LEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS 185
Query: 663 NFVS-KLSDF---EFLASGEL------------TP---------------KSDVYSFGII 691
+ L DF L L T K D++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 692 LLRLLTGRP 700
+L +L G
Sbjct: 246 MLHMLNGCH 254
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 4e-21
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 779 SEERCEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNL 838
++ + P Y I E+M++P + G TY+ + ++ L +P+T PL + L
Sbjct: 199 KRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQL 258
Query: 839 VPNLALRSAIQEWLQQH 855
+PNLA++ I ++ ++
Sbjct: 259 IPNLAMKEVIDAFISEN 275
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 5e-21
Identities = 62/240 (25%), Positives = 93/240 (38%), Gaps = 56/240 (23%)
Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPH 562
+S + + S + F+ +G G YG +YKG RH++ AIK++
Sbjct: 3 ASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG--RHVKTGQLAAIKVMDVT 60
Query: 563 SLQGPSEFQQEIDILSKI-RHPNLVTLVGA---------CPEVWTLVYEYLPNGSLEDRL 612
E +QEI++L K H N+ T GA ++W LV E+ GS+ D +
Sbjct: 61 G-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW-LVMEFCGAGSVTDLI 118
Query: 613 SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672
+ I E+ L LH H ++H D+K N+LL N KL DF
Sbjct: 119 KNTKGNTLKEEWIAY-ICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFG 174
Query: 673 FLASGEL------------TP--------------------KSDVYSFGIILLRLLTGRP 700
S +L TP KSD++S GI + + G P
Sbjct: 175 V--SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 5e-21
Identities = 62/313 (19%), Positives = 112/313 (35%), Gaps = 60/313 (19%)
Query: 490 KAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLL 549
K ++E E + RK + Q + + E + ++G G G ++K
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKIS-------ELGAGNGGVVFKVSH 54
Query: 550 RHMQ--VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTLVGAC---PEVWTLVYE 601
+ +A K++H P+ Q E+ +L + P +V GA E+ + E
Sbjct: 55 KPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-ICME 111
Query: 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661
++ GSL+ L + + Q +++ + L +L H I+H D+KP+NIL++
Sbjct: 112 HMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 166
Query: 662 ANFVSKLSDFEFLASGELT-------------------------PKSDVYSFGIILLRLL 696
+ KL DF SG+L +SD++S G+ L+ +
Sbjct: 167 SRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 224
Query: 697 TGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMS--------- 747
GR + + L G P L M
Sbjct: 225 VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYI 284
Query: 748 -RKSRPELGKDVW 759
+ P+L V+
Sbjct: 285 VNEPPPKLPSGVF 297
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 9e-21
Identities = 53/230 (23%), Positives = 83/230 (36%), Gaps = 79/230 (34%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEF--------------------- 570
IG+G YG + + A+K+L L + F
Sbjct: 21 IGKGSYGVVKLA--YNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 571 -----QQEIDILSKIRHPNLVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCKDN 617
QEI IL K+ HPN+V LV EV +V+E + G + + + K
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLV----EVLDDPNEDHLYMVFELVNQGPVMEVPTLK-- 132
Query: 618 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EF 673
PLS +L + +LH I+H D+KP+N+L+ + K++DF EF
Sbjct: 133 --PLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 674 LASGELT------------------------PKSDVYSFGIILLRLLTGR 699
S L DV++ G+ L + G+
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 1e-20
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 41/262 (15%)
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF---- 530
Q+ + +E + A KS++ ++ + +P + F +
Sbjct: 30 QDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFY 89
Query: 531 --DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV 586
+ +G G +G ++K +++A K++ ++ E + EI +++++ H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
L A LV EY+ G L DR+ + + L+ I ++C + +H
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQ-- 205
Query: 645 PHSIVHGDLKPANILLDANFVS--KLSDF-------------------EFLA----SGE- 678
I+H DLKP NIL K+ DF EFLA + +
Sbjct: 206 -MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDF 264
Query: 679 LTPKSDVYSFGIILLRLLTGRP 700
++ +D++S G+I LL+G
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLS 286
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 1e-20
Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 50/213 (23%)
Query: 529 NFDPSLKIGEGGYGSI-YKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLV 586
+F P +G G G+I Y+G+ + VA+K + P +E+ +L + HPN++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESDEHPNVI 81
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
+ + E +L++ + KD + I + + S L LHS
Sbjct: 82 RYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHS-- 136
Query: 645 PHSIVHGDLKPANILL-----DANFVSKLSDF---------------------------- 671
+IVH DLKP NIL+ + +SDF
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 672 EFL---ASGELTPKSDVYSFGIILLRLLT-GRP 700
E L T D++S G + +++ G
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 51/212 (24%), Positives = 79/212 (37%), Gaps = 62/212 (29%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ----EIDILSKIRHPNLVT 587
+GEG YG + + + A+K+L L+ + EI +L ++RH N++
Sbjct: 13 LGEGSYGKVKEV--LDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 588 LVGACPEVWT--------LVYEYLPNGSLE--DRLSCKDNSPPLS-WQTRIRIATELCSV 636
LV +V +V EY G E D + K Q +L
Sbjct: 71 LV----DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK----RFPVCQAH-GYFCQLIDG 121
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------EFLASGEL------TP--- 681
L +LHS IVH D+KP N+LL K+S A+ + +P
Sbjct: 122 LEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 682 --------------KSDVYSFGIILLRLLTGR 699
K D++S G+ L + TG
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 4e-20
Identities = 55/203 (27%), Positives = 80/203 (39%), Gaps = 49/203 (24%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKML---HPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
+IG G +G++Y VAIK + S + + +E+ L K+RHPN +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 590 GAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT---ELCSVLIFLHSC 643
G W LV EY GS D L + + PL + IA L +LHS
Sbjct: 121 GCYLREHTAW-LVMEYCL-GSASDLL--EVHKKPL---QEVEIAAVTHGALQGLAYLHS- 172
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELT----------------------- 680
H+++H D+K NILL + KL DF + +
Sbjct: 173 --HNMIHRDVKAGNILLSEPGLVKLGDFGS--ASIMAPANSFVGTPYWMAPEVILAMDEG 228
Query: 681 ---PKSDVYSFGIILLRLLTGRP 700
K DV+S GI + L +P
Sbjct: 229 QYDGKVDVWSLGITCIELAERKP 251
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 4e-20
Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 35/253 (13%)
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
+K + ++ + + S + Q++ + + ++D ++G
Sbjct: 107 RKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELG 166
Query: 538 EGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--P 593
G +G +++ R A K + ++EI +S +RHP LV L A
Sbjct: 167 TGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD 226
Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
++YE++ G L ++++ + N +S + ++C L +H ++ VH DL
Sbjct: 227 NEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHE---NNYVHLDL 281
Query: 654 KPANILLDANFVS--KLSDF-------------------EFLA----SGE-LTPKSDVYS 687
KP NI+ + KL DF EF A G+ + +D++S
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 341
Query: 688 FGIILLRLLTGRP 700
G++ LL+G
Sbjct: 342 VGVLSYILLSGLS 354
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 5e-20
Identities = 53/253 (20%), Positives = 95/253 (37%), Gaps = 47/253 (18%)
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
K + + K E++ K + + E ++G
Sbjct: 13 KVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILE------------ELG 60
Query: 538 EGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--P 593
G +G +++ + + K ++ + EI I++++ HP L+ L A
Sbjct: 61 SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 120
Query: 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653
L+ E+L G L DR++ +D +S I + C L +H HSIVH D+
Sbjct: 121 YEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINYMRQACEGLKHMHE---HSIVHLDI 175
Query: 654 KPANILLDANFVS--KLSDF-------------------EFLA----SGE-LTPKSDVYS 687
KP NI+ + S K+ DF EF A E + +D+++
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235
Query: 688 FGIILLRLLTGRP 700
G++ LL+G
Sbjct: 236 IGVLGYVLLSGLS 248
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 6e-20
Identities = 42/217 (19%), Positives = 75/217 (34%), Gaps = 54/217 (24%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQ---QEIDILSKI-RHPNLVTL 588
KIG G +GS++K + R AIK L G + Q +E+ + + +H ++V
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 589 VGACPEVWTL--VYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
A E + EY GSL D +S + ++ L ++HS
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS- 135
Query: 646 HSIVHGDLKPANILLDAN-------------------FVSKLSDFEFLASGELT------ 680
+VH D+KP+NI + + K+ D +
Sbjct: 136 --LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 193
Query: 681 ----------------PKSDVYSFGIILLRLLTGRPA 701
PK+D+++ + ++ P
Sbjct: 194 SRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 8e-20
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLV 589
+G+G +G + + + A+K++ ++ ++ +E+ +L ++ HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+ LV E G L D + + S RI ++ S + ++H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHK---NK 146
Query: 648 IVHGDLKPANILL---DANFVSKLSDF---EFLASGEL--------------------TP 681
IVH DLKP N+LL + ++ DF + +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 206
Query: 682 KSDVYSFGIILLRLLTGRP 700
K DV+S G+IL LL+G P
Sbjct: 207 KCDVWSTGVILYILLSGCP 225
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 8e-20
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVGA 591
K+G G +G ++ R ++ IK ++ Q P E + EI++L + HPN++ +
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+V E G L +R+ LS + ++ + L + HS +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHV 145
Query: 649 VHGDLKPANILL---DANFVSKLSDF-------------------EFLA----SGELTPK 682
VH DLKP NIL + K+ DF ++A ++T K
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFK 205
Query: 683 SDVYSFGIILLRLLTGRP 700
D++S G+++ LLTG
Sbjct: 206 CDIWSAGVVMYFLLTGCL 223
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 2e-19
Identities = 43/244 (17%), Positives = 74/244 (30%), Gaps = 58/244 (23%)
Query: 505 ASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEG--GYGSIYKGLLRHMQ--VAIKM-- 558
A H + S ++ IG+G ++ + V ++
Sbjct: 2 AHHHHHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN 61
Query: 559 LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA---CPEVWTLVYEYLPNGSLEDRLSCK 615
L S + + Q E+ + HPN+V E+W +V ++ GS +D +
Sbjct: 62 LEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW-VVTSFMAYGSAKDLICTH 120
Query: 616 DNSPPLSWQTRIRIATELCSVLI---FLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672
+ IA L VL ++H VH +K ++IL+ + LS
Sbjct: 121 FMDG----MNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLR 173
Query: 673 FLASGELT------------------------------------PKSDVYSFGIILLRLL 696
+ + KSD+YS GI L
Sbjct: 174 S--NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA 231
Query: 697 TGRP 700
G
Sbjct: 232 NGHV 235
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 38/198 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
K+G G YG + + H++ AIK++ S+ S +E+ +L + HPN++ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ LV E G L D + + + I ++ S + +LH H+I
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHK---HNI 157
Query: 649 VHGDLKPANILL---DANFVSKLSDF---EFLASGEL--------------------TPK 682
VH DLKP N+LL + + + K+ DF + + K
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEK 217
Query: 683 SDVYSFGIILLRLLTGRP 700
DV+S G+IL LL G P
Sbjct: 218 CDVWSIGVILFILLAGYP 235
|
| >3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A Length = 968 | Back alignment and structure |
|---|
Score = 92.9 bits (230), Expect = 2e-19
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 8/123 (6%)
Query: 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 793
+ ++ R ++ E + E R + E + P F P+
Sbjct: 843 VRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKAD------EEEDLEYGDVPDEFLDPL 896
Query: 794 FQEVMQDPHV-AADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWL 852
+M+DP + A + +K L S T P +PL +++ PN LR I +
Sbjct: 897 MYTIMKDPVILPASKMNIDRSTIKAHLLS-DSTDPFNRMPLKLEDVTPNEELRQKILCFK 955
Query: 853 QQH 855
+Q
Sbjct: 956 KQK 958
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 2e-19
Identities = 51/203 (25%), Positives = 75/203 (36%), Gaps = 51/203 (25%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVG 590
+GEG YG + L + VA+K++ E ++EI I + H N+V
Sbjct: 15 LGEGAYGEVQ--LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY- 71
Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
L EY G L DR+ + R +L + +++LH
Sbjct: 72 ---GHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF------------EFL---------ASGELT--- 680
I H D+KP N+LLD K+SDF L + EL
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 681 ----PKSDVYSFGIILLRLLTGR 699
DV+S GI+L +L G
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 3e-19
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 50/202 (24%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+G G +G + G +H +VA+K+L+ ++ + EI L RHP+++ L
Sbjct: 24 LGVGTFGKVKVG--KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 589 VGACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+V + +V EY+ G L D + L + R+ ++ S + + H
Sbjct: 82 Y----QVISTPSDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHR 134
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF---------EFL---------ASGELT---- 680
H +VH DLKP N+LLDA+ +K++DF EFL A+ E+
Sbjct: 135 ---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 191
Query: 681 ---PKSDVYSFGIILLRLLTGR 699
P+ D++S G+IL LL G
Sbjct: 192 YAGPEVDIWSSGVILYALLCGT 213
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 3e-19
Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 53/232 (22%)
Query: 515 FSDFSFSEIEGATHNF----DPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS 568
F D + + S +G G G + R +VAI+++ S
Sbjct: 118 FFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS 177
Query: 569 E--------FQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNS 618
+ EI+IL K+ HP ++ + + + +V E + G L D++
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR- 235
Query: 619 PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDF---E 672
L T ++ + +LH + I+H DLKP N+LL + + + K++DF +
Sbjct: 236 --LKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Query: 673 FLASGEL------------------------TPKSDVYSFGIILLRLLTGRP 700
L L D +S G+IL L+G P
Sbjct: 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 4e-19
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 36/196 (18%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
IG G +G + + + ++ A K + + ++ F+QEI+I+ + HPN++ L
Sbjct: 16 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
LV E G L +R+ K RI ++ S + + H ++ H
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHK---LNVAH 129
Query: 651 GDLKPANILL---DANFVSKLSDF---EFLASGEL--------------------TPKSD 684
DLKP N L + KL DF G++ P+ D
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 189
Query: 685 VYSFGIILLRLLTGRP 700
+S G+++ LL G P
Sbjct: 190 EWSAGVMMYVLLCGYP 205
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 5e-19
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTLVG 590
+G+G +G + K R + A+K+++ S + S +E+++L K+ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ +V E G L D + + S RI ++ S + ++H H+I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 649 VHGDLKPANILL---DANFVSKLSDF---EFLASGEL--------------------TPK 682
VH DLKP NILL + + K+ DF K
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 683 SDVYSFGIILLRLLTGRP 700
DV+S G+IL LL+G P
Sbjct: 203 CDVWSAGVILYILLSGTP 220
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 8e-19
Identities = 51/203 (25%), Positives = 75/203 (36%), Gaps = 51/203 (25%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTLVG 590
+GEG YG + L + VA+K++ E ++EI I + H N+V
Sbjct: 15 LGEGAYGEVQ--LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY- 71
Query: 591 ACPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
L EY G L DR+ + R +L + +++LH
Sbjct: 72 ---GHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDF------------EFL---------ASGELT--- 680
I H D+KP N+LLD K+SDF L + EL
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 681 ----PKSDVYSFGIILLRLLTGR 699
DV+S GI+L +L G
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 1e-18
Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 49/209 (23%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS-------------EFQQEIDILSK 579
K+G G YG + + H + AIK++ E EI +L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 580 IRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
+ HPN++ L + + LV E+ G L +++ + I ++ S +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGI 159
Query: 638 IFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDF---EFLASGEL------------ 679
+LH H+IVH D+KP NILL ++ K+ DF F +
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 680 --------TPKSDVYSFGIILLRLLTGRP 700
K DV+S G+I+ LL G P
Sbjct: 217 PEVLKKKYNEKCDVWSCGVIMYILLCGYP 245
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-18
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 43/198 (21%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+GEG +G + H +VA+K + L+ + EI L +RHP+++ L
Sbjct: 17 LGEGSFGKVKLA--THYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
V P +V EY G L D + K ++ R ++ + + H H
Sbjct: 75 YDVITTPTDIVMVIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHR---H 127
Query: 647 SIVHGDLKPANILLDANFVSKLSDF---------EFL---------ASGELT-------P 681
IVH DLKP N+LLD N K++DF FL A+ E+ P
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 682 KSDVYSFGIILLRLLTGR 699
+ DV+S GI+L +L GR
Sbjct: 188 EVDVWSCGIVLYVMLVGR 205
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 1e-18
Identities = 44/204 (21%), Positives = 75/204 (36%), Gaps = 48/204 (23%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKML------HPHSLQGPSEFQQEIDILSKIRH--P 583
+G GG+GS+Y G + VAIK + L + E+ +L K+
Sbjct: 51 LGSGGFGSVYSG--IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108
Query: 584 NLVTL--VGACPEVWTLVYEY-LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
++ L P+ + L+ E P L D ++ + L + ++ +
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHC 165
Query: 641 HSCKPHSIVHGDLKPANILLDANFVS-KLSDF---EFLASGELT---------------- 680
H+ ++H D+K NIL+D N KL DF L T
Sbjct: 166 HN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 222
Query: 681 -----PKSDVYSFGIILLRLLTGR 699
+ V+S GI+L ++ G
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGD 246
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 1e-18
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 38/198 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
+G+G +G + K R + A+K+++ S + +E+++L K+ HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ +V E G L D + + S RI ++ S + ++H H+I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 649 VHGDLKPANILL---DANFVSKLSDF---EFLASGEL--------------------TPK 682
VH DLKP NILL + + K+ DF K
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEK 202
Query: 683 SDVYSFGIILLRLLTGRP 700
DV+S G+IL LL+G P
Sbjct: 203 CDVWSAGVILYILLSGTP 220
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 49/207 (23%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHP-HSLQGPSEFQQEIDI-LSKIRHPNLVTL 588
+IG G YGS+ K H +A+K + + + ++D+ + P +V
Sbjct: 29 EIGRGAYGSVNKM--VHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 589 VGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI--RIATELCSVLIFLHSC 643
GA + W + E + + S + + I +I L L
Sbjct: 87 YGALFREGDCW-ICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE- 143
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGEL-----------TP----------- 681
I+H D+KP+NILLD + KL DF SG+L
Sbjct: 144 -NLKIIHRDIKPSNILLDRSGNIKLCDFGI--SGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 682 --------KSDVYSFGIILLRLLTGRP 700
+SDV+S GI L L TGR
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRF 227
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 4e-18
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 44/204 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
++G G + + K + ++ A K + + E ++E+ IL ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
TL L+ E + G L D L+ K++ LS + ++ + +LH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-- 133
Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDF------------------------EFLAS 676
I H DLKP NI+L KL DF E +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
L ++D++S G+I LL+G
Sbjct: 193 EPLGLEADMWSIGVITYILLSGAS 216
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 4e-18
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 48/206 (23%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHP-HSLQGPSEFQQEIDI-LSKIRHPNLVTL 588
++G G YG + K RH+ +A+K + + Q ++DI + + P VT
Sbjct: 14 ELGRGAYGVVEKM--RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 589 VGAC---PEVWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
GA +VW + E + + SL+ D + +IA + L LHS
Sbjct: 72 YGALFREGDVW-ICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-- 127
Query: 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASGEL-----------TP------------ 681
S++H D+KP+N+L++A K+ DF SG L
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 682 -------KSDVYSFGIILLRLLTGRP 700
KSD++S GI ++ L R
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRF 211
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 4e-18
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 40/201 (19%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL- 588
K+G G Y ++YKG + VA+K + S +G PS +EI ++ +++H N+V L
Sbjct: 12 KLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 589 -VGACPEVWTLVYEYLPN--GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
V TLV+E++ N D + + L +L L F H
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE--- 126
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF----EF----------------------LASGEL 679
+ I+H DLKP N+L++ KL DF F + S
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 680 TPKSDVYSFGIILLRLLTGRP 700
+ D++S G IL ++TG+P
Sbjct: 187 STSIDIWSCGCILAEMITGKP 207
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 5e-18
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 44/204 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
++G G + + K + + A K + L E ++E++IL +IRHPN++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
TL L+ E + G L D L+ K++ L+ + ++ + +LHS
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS-- 126
Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDF------------------------EFLAS 676
I H DLKP NI+L N KL DF E +
Sbjct: 127 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
L ++D++S G+I LL+G
Sbjct: 186 EPLGLEADMWSIGVITYILLSGAS 209
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 5e-18
Identities = 49/258 (18%), Positives = 84/258 (32%), Gaps = 66/258 (25%)
Query: 535 KIGEGGYGSI-YKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
+G G G++ ++G + VA+K + EI +L++ HPN++ +
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRYYCSE 78
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATEL----CSVLIFLHSCKPH 646
+ E N +L+D + K+ S + L S + LHS
Sbjct: 79 TTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134
Query: 647 SIVHGDLKPANILLD-------------ANFVSKLSDF---------------------- 671
I+H DLKP NIL+ N +SDF
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 672 --------------EFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGK 716
LT D++S G + +L+ G+ G + + G
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 254
Query: 717 LKNLLDPLAGDWPFVQAE 734
+L + + AE
Sbjct: 255 F-SLDEMKCLHDRSLIAE 271
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 9e-18
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 49/208 (23%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--------FQQEIDILSKIRHPN 584
+G G G + R +VAIK++ S + EI+IL K+ HP
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 585 LVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
++ + + + +V E + G L D++ L T ++ + +LH
Sbjct: 77 IIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE 132
Query: 643 CKPHSIVHGDLKPANILL---DANFVSKLSDF---EFLASGEL----------------- 679
+ I+H DLKP N+LL + + + K++DF + L L
Sbjct: 133 ---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 680 -------TPKSDVYSFGIILLRLLTGRP 700
D +S G+IL L+G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYP 217
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 87.6 bits (216), Expect = 1e-17
Identities = 99/676 (14%), Positives = 197/676 (29%), Gaps = 225/676 (33%)
Query: 7 VPAIAQGVDSVRCPDIQ--MAGITSSR--RGIVEEPVASVIEDKIYVAVAKQVKESKSVL 62
A D C D+Q I S I+ A L
Sbjct: 26 EDAFVDNFD---CKDVQDMPKSILSKEEIDHIIMSKDA---VSGTLR------------L 67
Query: 63 LWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQ------AYREIERQDMHN 116
W L + + + V ++ KF S ++ E+ Q Y E +R ++N
Sbjct: 68 FWTLLSKQ-EEMVQKFVEEVLRI----NYKFLMSPIKTEQRQPSMMTRMYIE-QRDRLYN 121
Query: 117 HLDMCLLICRQMGV-RAEKLDTESESTEKGILELISH-----YGIR---K--LVMGAAAD 165
+ + V R + + +LEL G+ K + +
Sbjct: 122 DNQ----VFAKYNVSRLQPY----LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 166 KHYKKKM------MDL---KSKKAISVRQQAPASCHIWFICNGNLIYTREGSLDGIDPEI 216
+ KM ++L S + + Q L+Y + + +
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQ-------------KLLYQIDPNWT-SRSDH 219
Query: 217 SSPSFQASHNTENR---------HPNCLRSQSVVLRHNRPMKLTNPVQDLFHRVRSMNFD 267
SS H+ + + NCL +VL + VQ+ + N
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCL----LVLLN---------VQNAKA-WNAFNLS 265
Query: 268 RNVGNVMTSQD-SIGGLSSPASRSDAEVSSDECTTGRSTSQGSLSSCSSRGVIDVAMIPL 326
+ ++T++ + S A+ + +S D + + + S +D
Sbjct: 266 CKI--LLTTRFKQVTDFLSAATTT--HISLDHHSMTLTPDE-VKSLLLK--YLDCR---- 314
Query: 327 IRTEGVSTLPPSKEDLQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKA 386
LP E L ++P ++ E++R G A
Sbjct: 315 -----PQDLPR--EVLTTNP---------------RRLSI----------IAESIRDGLA 342
Query: 387 --------EKDAIESIRRAKAS-ESLYAEELKRRKEFEEALA----NGKLE---LERM-- 428
D + +I ++S L E ++ F+ L+ + + L +
Sbjct: 343 TWDNWKHVNCDKLTTII--ESSLNVLEPAEYRKM--FDR-LSVFPPSAHIPTILLSLIWF 397
Query: 429 KKQHDEVMEELQIALDQKSLLESQIAES---------DQTAK-----ELEQKIISAVELL 474
+VM + L + SL+E Q ES + K L + I+ +
Sbjct: 398 DVIKSDVMVVVN-KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456
Query: 475 QNYKKEQDELQMERD-----------KAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEI 523
+ + + D + D K ++ E + + F DF F +
Sbjct: 457 KTFDSD-DLIPPYLDQYFYSHIGHHLKNIEHPERM----------TLFRMVFLDFRF--L 503
Query: 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK---- 579
E KI G + + +K P+ ++++ ++ +
Sbjct: 504 EQ---------KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPK 554
Query: 580 -----IRHP--NLVTL 588
I +L+ +
Sbjct: 555 IEENLICSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 8e-09
Identities = 63/544 (11%), Positives = 140/544 (25%), Gaps = 171/544 (31%)
Query: 375 EAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDE 434
FE+A KD + + + E + + + K+ + + +E
Sbjct: 23 SVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSKDAVSGT---LRLFWTLLSKQEE 77
Query: 435 VMEELQIALDQK--SLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAV 492
++++ + + L S I + + + I + L N + + + R +
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137
Query: 493 KEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM 552
+LR++ E + ++ G G G K +
Sbjct: 138 L---KLRQALLELRPAKNV--------------LID--------GVLGSG---KTWV--- 166
Query: 553 QVAIKMLHPHSLQGPSEFQQEIDI----LSKIRHPNLVTLVGACPEVWTLVYEYLPNGSL 608
A+ + + +Q +F+ I L P V + + L+Y+ PN +
Sbjct: 167 --ALDVCLSYKVQCKMDFK----IFWLNLKNCNSPETVLEM-----LQKLLYQIDPNWTS 215
Query: 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668
S S Q +R + + + ++L
Sbjct: 216 RSDHSSNIKLRIHSIQAELRR--------LLKSKPYENCL---------LVLL------- 251
Query: 669 SDFEFLASGELTPKSDVYS------FGI---ILLRLLTGRPALGITKEVQYALDTGKLKN 719
+V + F + I LLT R K+V L +
Sbjct: 252 ---------------NVQNAKAWNAFNLSCKI---LLTTR-----FKQVTDFLSAATTTH 288
Query: 720 L-LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV-------------------- 758
+ LD E + L + + + P
Sbjct: 289 ISLDHH--SMTLTPDEVKSLLL-KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
Query: 759 -WRVLEPMRASCGGSTSYR-LGSEE--RCEPPPYFTCPIFQEVMQDPHVAA--------D 806
W+ + + + +S L E + + +F H+ D
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKM----FDRLSVFPP---SAHIPTILLSLIWFD 398
Query: 807 GFTYEAE----------ALKGWLDSG----H-----ETSPMTNLPLAHKNLVPNLALRSA 847
+ ++ + N H+++V + +
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT 458
Query: 848 IQEW 851
Sbjct: 459 FDSD 462
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 1e-17
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
+GEG YG + K R+ VAIK +EI +L ++RH NLV L
Sbjct: 32 LVGEGSYGMVMKC--RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+ C + W LV+E++ + ++ D L + L +Q + ++ + + F HS H
Sbjct: 90 LEVCKKKKRWYLVFEFVDH-TILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHS---H 143
Query: 647 SIVHGDLKPANILLDANFVSKLSDFEF--------------------------LASGELT 680
+I+H D+KP NIL+ + V KL DF F + +
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 681 PKSDVYSFGIILLRLLTGRP 700
DV++ G ++ + G P
Sbjct: 204 KAVDVWAIGCLVTEMFMGEP 223
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 46/204 (22%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHP-HSLQGPSEFQQEIDILSK-IRHPNLVTLVG 590
++G G G ++K R +A+K + + + ++D++ K P +V G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 591 AC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+V+ + E + E K P+ + ++ + L +L H
Sbjct: 92 TFITNTDVF-IAMELM-GTCAEKLK--KRMQGPIPERILGKMTVAIVKALYYLKE--KHG 145
Query: 648 IVHGDLKPANILLDANFVSKLSDFEFLASGEL-----------TP--------------- 681
++H D+KP+NILLD KL DF SG L
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGI--SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 682 -----KSDVYSFGIILLRLLTGRP 700
++DV+S GI L+ L TG+
Sbjct: 204 PDYDIRADVWSLGISLVELATGQF 227
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 48/204 (23%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKM-----LHPHSLQGPSEFQQ---EIDILSKIRHP 583
+G G +G ++ +V +K + + + EI ILS++ H
Sbjct: 32 LGSGAFGFVWTA--VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 584 NLVTL--VGACPEVWTLVYEYLPNGS-LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
N++ + + + LV E +G L + L I +L S + +L
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYL 146
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF---------EFL---------ASGELT-- 680
I+H D+K NI++ +F KL DF + + E+
Sbjct: 147 RL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203
Query: 681 -----PKSDVYSFGIILLRLLTGR 699
P+ +++S G+ L L+
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEE 227
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-17
Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 36/196 (18%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA- 591
+G G + ++ R A+K + S + EI +L KI+H N+VTL
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 592 -CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ LV + + G L DR+ + + + + ++ S + +LH + IVH
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHE---NGIVH 129
Query: 651 GDLKPANILL---DANFVSKLSDF-----------------------EFLASGELTPKSD 684
DLKP N+L + N ++DF E LA + D
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVD 189
Query: 685 VYSFGIILLRLLTGRP 700
+S G+I LL G P
Sbjct: 190 CWSIGVITYILLCGYP 205
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 50/206 (24%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKML------HPHSLQGPSEFQQEIDILSKIR---- 581
+G+GG+G+++ G + QVAIK++ L E+ +L K+
Sbjct: 39 LGKGGFGTVFAG--HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 582 HPNLVTL--VGACPEVWTLVYEY-LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
HP ++ L E + LV E LP L D ++ K L ++ + +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQ 153
Query: 639 FLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDF---EFLASGELT-------------- 680
HS +VH D+K NIL+D +KL DF L T
Sbjct: 154 HCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI 210
Query: 681 -------PKSDVYSFGIILLRLLTGR 699
+ V+S GI+L ++ G
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGD 236
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 40/198 (20%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+G G +G +++ + K + ++EI IL+ RH N++ L +
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
E +++E++ + +R++ L+ + + ++C L FLHS H+I H
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEALQFLHS---HNIGH 125
Query: 651 GDLKPANILL----DANFVSKLSDF------------------------EFLASGELTPK 682
D++P NI+ + K+ +F E ++
Sbjct: 126 FDIRPENIIYQTRRSSTI--KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 683 SDVYSFGIILLRLLTGRP 700
+D++S G ++ LL+G
Sbjct: 184 TDMWSLGTLVYVLLSGIN 201
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 3e-17
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
++G G + + K + ++ A K + + E ++E+ IL ++ HPN++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
TL L+ E + G L D L+ K++ LS + ++ + +LH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-- 133
Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDF------------------------EFLAS 676
I H DLKP NI+L KL DF E +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
L ++D++S G+I LL+G
Sbjct: 193 EPLGLEADMWSIGVITYILLSGAS 216
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 3e-17
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 44/204 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS------EFQQEIDILSKIRHPNLV 586
++G G + + K + +Q A K + + + ++E+ IL +I+HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 587 TLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
TL L+ E + G L D L+ K++ L+ + ++ + + +LHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-- 132
Query: 645 PHSIVHGDLKPANILL----DANFVSKLSDF------------------------EFLAS 676
I H DLKP NI+L K+ DF E +
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
L ++D++S G+I LL+G
Sbjct: 192 EPLGLEADMWSIGVITYILLSGAS 215
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 4e-17
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
KIGEG YG ++K R+ VAIK +EI +L +++HPNLV L
Sbjct: 10 KIGEGSYGVVFKC--RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 589 VGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
+ LV+EY + ++ L + I + + F H H
Sbjct: 68 LEVFRRKRRLHLVFEYCDH-TVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHK---H 121
Query: 647 SIVHGDLKPANILLDANFVSKLSDF 671
+ +H D+KP NIL+ + V KL DF
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDF 146
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 4e-17
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
++G+G + + + + + ++ A K+++ L ++E I K++HPN+V L
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ LV++ + G L + + ++ S ++ + + HS + I
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS---NGI 126
Query: 649 VHGDLKPANILL---DANFVSKLSDF------------------------EFLASGELTP 681
VH +LKP N+LL KL+DF E L +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 682 KSDVYSFGIILLRLLTGRP 700
D+++ G+IL LL G P
Sbjct: 187 PVDIWACGVILYILLVGYP 205
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 9e-17
Identities = 62/300 (20%), Positives = 109/300 (36%), Gaps = 49/300 (16%)
Query: 444 DQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRK 503
+ + + + + L ++ K+ + +
Sbjct: 10 GVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGT 69
Query: 504 EASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP 561
E M ++ + +DP IG G + + + R + A+K++
Sbjct: 70 ENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV 129
Query: 562 HSLQGPSE--------FQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPNGSLED 610
+ + E ++E IL ++ HP+++TL+ + LV++ + G L D
Sbjct: 130 TAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD 189
Query: 611 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670
L+ K LS + I L + FLH+ ++IVH DLKP NILLD N +LSD
Sbjct: 190 YLTEKVA---LSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSD 243
Query: 671 F---EFLASGEL---------------------------TPKSDVYSFGIILLRLLTGRP 700
F L GE + D+++ G+IL LL G P
Sbjct: 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 1e-16
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 53/214 (24%)
Query: 534 LKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV 589
K+G G YG +YK + + A+K + + +EI +L +++HPN+++L
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQ 84
Query: 590 GACPE-----VWTLVYEYLPN---GSLEDRLSCKDNSP--PLSWQTRIRIATELCSVLIF 639
VW L+++Y + ++ + K N L + ++ + +
Sbjct: 85 KVFLSHADRKVW-LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVS----KLSDF----EF------------------ 673
LH+ + ++H DLKPANIL+ K++D F
Sbjct: 144 LHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200
Query: 674 -------LASGELTPKSDVYSFGIILLRLLTGRP 700
L + T D+++ G I LLT P
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 40/239 (16%), Positives = 83/239 (34%), Gaps = 47/239 (19%)
Query: 500 KSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIK 557
+ D F ++ ++ IG+G + + + + R Q A+K
Sbjct: 2 SPGISGGGGGILDMADDDVLFEDV------YELCEVIGKGPFSVVRRCINRETGQQFAVK 55
Query: 558 M-----LHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLED 610
+ + ++E I ++HP++V L+ + +V+E++ L
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 611 RLSCKDNSP-PLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVS 666
+ + ++ S ++ L + H ++I+H D+KP +LL + +
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPV 172
Query: 667 KLSDF-------------------------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
KL F E + DV+ G+IL LL+G
Sbjct: 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 231
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 1e-16
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 50/210 (23%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---------FQQEIDILSKI-RH 582
+G G + + + + + A+K++ S +E+DIL K+ H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 583 PNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
PN++ L + LV++ + G L D L+ K LS + +I L V+ L
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICAL 140
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF---EFLASGEL------------------ 679
H +IVH DLKP NILLD + KL+DF L GE
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC 197
Query: 680 ---------TPKSDVYSFGIILLRLLTGRP 700
+ D++S G+I+ LL G P
Sbjct: 198 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-16
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591
+G G G + + + + A+KML ++E+++ + + P++V +V
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVDV 79
Query: 592 CPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
++ +V E L G L R+ + + + + I + + +LHS
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS--- 135
Query: 646 HSIVHGDLKPANILL---DANFVSKLSDF----EFLASGELTPKSDVYSFGIILLRLLTG 698
+I H D+KP N+L N + KL+DF E D++S G+I+ LL G
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK-YDKSCDMWSLGVIMYILLCG 194
Query: 699 RP 700
P
Sbjct: 195 YP 196
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 38/200 (19%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRH-PNLVTLV 589
++G G + + + + + + A K L +E EI +L + P ++ L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 590 GA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
L+ EY G + + + +S IR+ ++ + +LH ++
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLC-LPELAEMVSENDVIRLIKQILEGVYYLHQ---NN 151
Query: 648 IVHGDLKPANILL---DANFVSKLSDF------------------------EFLASGELT 680
IVH DLKP NILL K+ DF E L +T
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 681 PKSDVYSFGIILLRLLTGRP 700
+D+++ GII LLT
Sbjct: 212 TATDMWNIGIIAYMLLTHTS 231
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 2e-16
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL--V 589
KIGEG YG +YK + + A+K + G PS +EI IL +++H N+V L V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ LV+E+L L+ L L T +L + + + H ++
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 650 HGDLKPANILLDANFVSKLSDF----EF----------------------LASGELTPKS 683
H DLKP N+L++ K++DF F + S + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 684 DVYSFGIILLRLLTGRP 700
D++S G I ++ G P
Sbjct: 183 DIWSVGCIFAEMVNGTP 199
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
++G+G + + + + + ++ A K+++ L ++E I K++HPN+V L
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ LV++ + G L + + ++ S ++ + + HS + I
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS---NGI 149
Query: 649 VHGDLKPANILL---DANFVSKLSDF------------------------EFLASGELTP 681
VH +LKP N+LL KL+DF E L +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 682 KSDVYSFGIILLRLLTGRP 700
D+++ G+IL LL G P
Sbjct: 210 PVDIWACGVILYILLVGYP 228
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 3e-16
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 37/197 (18%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL--V 589
K+GEG YG +YK + VA+K + + G PS +EI +L ++ HPN+V+L V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
TLV+E++ L+ L +N L +L + H H I+
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRIL 141
Query: 650 HGDLKPANILLDANFVSKLSDF----EF----------------------LASGELTPKS 683
H DLKP N+L++++ KL+DF F + S + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 684 DVYSFGIILLRLLTGRP 700
D++S G I ++TG+P
Sbjct: 202 DIWSIGCIFAEMITGKP 218
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 3e-16
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNL 585
+ K+GEG Y ++YKG + VA+K + +G P +E+ +L ++H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 586 VTL--VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
VTL + + TLV+EYL L+ L D ++ +L L + H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCHR- 118
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF----EF----------------------LASG 677
++H DLKP N+L++ KL+DF L S
Sbjct: 119 --QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 678 ELTPKSDVYSFGIILLRLLTGRP 700
+ + + D++ G I + TGRP
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRP 199
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 4e-16
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL 588
KIGEG YG+++K ++ + VA+K + G PS +EI +L +++H N+V L
Sbjct: 9 KIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
V + TLV+E+ L+ + L + +L L F HS
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHS---R 120
Query: 647 SIVHGDLKPANILLDANFVSKLSDF 671
+++H DLKP N+L++ N KL++F
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANF 145
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 6e-16
Identities = 52/277 (18%), Positives = 87/277 (31%), Gaps = 85/277 (30%)
Query: 503 KEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLH 560
SS +F S E+ + IG+G YG + + AIK+++
Sbjct: 4 HHHHSSGRENLYFQGGSLLEL---QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60
Query: 561 PHSLQGPSE-----FQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLS 613
+ ++ + + E+ ++ K+ HPN+ L + LV E G L D+L+
Sbjct: 61 KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120
Query: 614 CKDNSPPLSWQTRI-------------------------------------RIATELCSV 636
+ + I ++ S
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180
Query: 637 LIFLHSCKPHSIVHGDLKPANILL--DANFVSKLSDF---EFLASGEL------------ 679
L +LH+ I H D+KP N L + +F KL DF +
Sbjct: 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237
Query: 680 ----------------TPKSDVYSFGIILLRLLTGRP 700
PK D +S G++L LL G
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV 274
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 7e-16
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 48/205 (23%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQ-G-PSEFQQEIDILSKIRHPNLVTL 588
K+GEG YG +YK VAIK + + G P +E+ +L +++H N++ L
Sbjct: 41 KLGEGTYGEVYKA--IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 589 --VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
V L++EY N D D +P +S + +L + + F HS
Sbjct: 99 KSVIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS---R 151
Query: 647 SIVHGDLKPANILLDANFVS-----KLSDF----EF----------------------LA 675
+H DLKP N+LL + S K+ DF F L
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 676 SGELTPKSDVYSFGIILLRLLTGRP 700
S + D++S I +L P
Sbjct: 212 SRHYSTSVDIWSIACIWAEMLMKTP 236
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 1e-15
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 25/151 (16%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ--------EIDILSKIRH 582
+GEG + ++YK R VAIK + L SE + EI +L ++ H
Sbjct: 17 FLGEGQFATVYKA--RDKNTNQIVAIKKIK---LGHRSEAKDGINRTALREIKLLQELSH 71
Query: 583 PNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
PN++ L+ A +LV++++ LE + KDNS L+ L +L
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVII--KDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
H H I+H DLKP N+LLD N V KL+DF
Sbjct: 129 HQ---HWILHRDLKPNNLLLDENGVLKLADF 156
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 2e-15
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591
+G G G + + R + A+K+L+ +QE+D + P++V ++
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-----ARQEVDHHWQASGGPHIVCILDV 90
Query: 592 CPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
+ ++ E + G L R+ + + + + I ++ + + FLHS
Sbjct: 91 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTAIQFLHS--- 146
Query: 646 HSIVHGDLKPANILL---DANFVSKLSDF---EFLASGELT------------------- 680
H+I H D+KP N+L + + V KL+DF + L
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKY 206
Query: 681 -PKSDVYSFGIILLRLLTGRP 700
D++S G+I+ LL G P
Sbjct: 207 DKSCDMWSLGVIMYILLCGFP 227
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 38/200 (19%), Positives = 75/200 (37%), Gaps = 40/200 (20%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIRHPNLVTLVG 590
++G+G + + + + + A +++ L ++E I ++HPN+V L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
+ L+++ + G L + + ++ S ++ ++ H +
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQ---MGV 131
Query: 649 VHGDLKPANILL---DANFVSKLSDF-------------------------EFLASGELT 680
VH +LKP N+LL KL+DF E L
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 681 PKSDVYSFGIILLRLLTGRP 700
D+++ G+IL LL G P
Sbjct: 192 KPVDLWACGVILYILLVGYP 211
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-15
Identities = 49/197 (24%), Positives = 72/197 (36%), Gaps = 42/197 (21%)
Query: 536 IGEGGYGSIYKGLLRHM----QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL--V 589
IG G +G L+R VA+K + + Q+EI +RHPN+V V
Sbjct: 28 IGSGNFGVAR--LMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEV 84
Query: 590 GACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
P ++ EY G L +R+ S +L S + + HS I
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHS---MQIC 138
Query: 650 HGDLKPANILLDANFVS--KLSDF---------EFL---------ASGELT-------PK 682
H DLK N LLD + K+ DF + E+
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 683 SDVYSFGIILLRLLTGR 699
+DV+S G+ L +L G
Sbjct: 199 ADVWSCGVTLYVMLVGA 215
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 3e-15
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 42/199 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGA 591
+GEG + K + + + A+K++ Q+EI L HPN+V L
Sbjct: 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT---QKEITALKLCEGHPNIVKLHEV 74
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
LV E L G L +R+ K + S I +L S + +H +V
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHD---VGVV 128
Query: 650 HGDLKPANILL---DANFVSKLSDF----EFLASGEL------TP--------------- 681
H DLKP N+L + N K+ DF + T
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDE 188
Query: 682 KSDVYSFGIILLRLLTGRP 700
D++S G+IL +L+G+
Sbjct: 189 SCDLWSLGVILYTMLSGQV 207
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 5e-15
Identities = 47/230 (20%), Positives = 91/230 (39%), Gaps = 60/230 (26%)
Query: 525 GATHNFDPSLK---------IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQE 573
G+T +F + +GEG + + + + A+K++ S +E
Sbjct: 1 GSTDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE 60
Query: 574 IDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
+++L + + H N++ L+ + + LV+E + GS+ + + + + +
Sbjct: 61 VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVV 117
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEF------------LA 675
++ S L FLH+ I H DLKP NIL + K+ DF+ ++
Sbjct: 118 QDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 676 SGELT-------------------------PKSDVYSFGIILLRLLTGRP 700
+ EL + D++S G+IL LL+G P
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 1e-14
Identities = 53/212 (25%), Positives = 80/212 (37%), Gaps = 56/212 (26%)
Query: 535 KIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQG-----PSEFQQEIDIL---SKIRH 582
+IG G YG++YK R VA+K + + G P +E+ +L H
Sbjct: 16 EIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEH 73
Query: 583 PNLVTLV-------GACPEVWTLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATE 632
PN+V L+ TLV+E++ L+ P L +T + +
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-----PPPGLPAETIKDLMRQ 128
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------- 671
L FLH+ + IVH DLKP NIL+ + KL+DF
Sbjct: 129 FLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWY 185
Query: 672 ---EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E L D++S G I + +P
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 74.5 bits (182), Expect = 2e-14
Identities = 44/229 (19%), Positives = 68/229 (29%), Gaps = 59/229 (25%)
Query: 508 SSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--- 564
S P FS T KIGEG +G +++ + H VAIK++
Sbjct: 6 SQKGPVPFSHCL------PTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLV 59
Query: 565 -----QGPSEFQQEIDILSKI---------RHPNLVTLV------GACPEVWTLVYEYLP 604
+ E EI I ++ R + L G+ P + +++
Sbjct: 60 NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYN 119
Query: 605 --NGSLEDRLS--------------------CKDNSPPLSWQTRIRIATELCSVLIFLHS 642
GS DR + + S T I +L + L
Sbjct: 120 STKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE- 178
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGII 691
H DL N+LL + KL S + S G+
Sbjct: 179 -ASLRFEHRDLHWGNVLLKKTSLKKLHYT------LNGKSSTIPSCGLQ 220
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 57/273 (20%), Positives = 94/273 (34%), Gaps = 65/273 (23%)
Query: 471 VELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNF 530
++LL +E ++ +DK V A+ L+ + + DF
Sbjct: 18 LDLLLGVHQELGASELAQDKYV--ADFLQWAEPIVVRLKEVRLQRDDFEI---------- 65
Query: 531 DPSLK-IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIRH 582
LK IG G + + +++ Q A+K+++ + E F++E D+L
Sbjct: 66 ---LKVIGRGAFSEVA--VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
+ L A LV EY G L LS P R +A E+ + +
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM-ARFYLA-EIVMAIDSV 178
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------------EFL 674
H VH D+KP NILLD +L+DF E L
Sbjct: 179 HR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
Query: 675 ASGELTPKSDVY-------SFGIILLRLLTGRP 700
+ P + Y + G+ + G+
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHPNLVTL 588
+GEG + ++ L R + AIK+L + ++ E D++S++ HP V L
Sbjct: 38 LGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 589 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
E Y NG L + K S + TR A E+ S L +LH
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDET-CTRFYTA-EIVSALEYLHG---K 149
Query: 647 SIVHGDLKPANILLDANFVSKLSDF---------------------------EFLASGEL 679
I+H DLKP NILL+ + +++DF E L
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 209
Query: 680 TPKSDVYSFGIILLRLLTGRP 700
SD+++ G I+ +L+ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLP 230
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 54/210 (25%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSLQG--PSEFQQEIDIL---SKIRHPN 584
+IGEG YG ++K R ++ VA+K + + + P +E+ +L HPN
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 585 LVTLVGACPEVW-------TLVYEYLPN---GSLEDRLSCKDNSPPLSWQTRIRIATELC 634
+V L C TLV+E++ L+ P + +T + +L
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-----PEPGVPTETIKDMMFQLL 130
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------- 671
L FLHS H +VH DLKP NIL+ ++ KL+DF
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E L D++S G I + +P
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
|
| >2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-14
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 789 FTCPIFQEVMQDPHVAAD-GFTYEAEALKGWLDSGHETS-----PMT---NLPLAHKNLV 839
FTCPI +E M+ P G TYE +A+ ++S + P + + +L+
Sbjct: 8 FTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLI 67
Query: 840 PNLALRSAIQEWLQQH 855
+ ALR AI+ ++
Sbjct: 68 QDEALRRAIENHNKKR 83
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 58/209 (27%)
Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL----- 588
IG G +G +++ L +VAIK + LQ +E+ I+ ++HPN+V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 589 --VGACPEVW-TLVYEYLP---NGSLEDRLSCKDNSPPL-----SWQTRIRIATELCSVL 637
EV+ LV EY+P + K P L +Q L L
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ--------LLRSL 154
Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF---------EF-------------- 673
++HS I H D+KP N+LLD V KL DF E
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPE 211
Query: 674 --LASGELTPKSDVYSFGIILLRLLTGRP 700
+ T D++S G ++ L+ G+P
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQP 240
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 3e-14
Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 41/258 (15%)
Query: 474 LQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPS 533
+ ++ + + + ++ + ++S +P ++ D S + + F+
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGS--NRDALSDFFEVE 58
Query: 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA 591
++G G +Y+ + A+K+L + EI +L ++ HPN++ L
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
P +LV E + G L DR+ K S + ++ + +LH + IV
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHE---NGIV 170
Query: 650 HGDLKPANILL---DANFVSKLSDF------------------------EFLASGELTPK 682
H DLKP N+L + K++DF E L P+
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 683 SDVYSFGIILLRLLTGRP 700
D++S GII LL G
Sbjct: 231 VDMWSVGIITYILLCGFE 248
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 4e-14
Identities = 61/295 (20%), Positives = 105/295 (35%), Gaps = 63/295 (21%)
Query: 447 SLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEAS 506
LE I + + + +++L E + + R+K + E L ++ S
Sbjct: 7 RQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNI--LEYLEWAKPFTS 64
Query: 507 SSSHMPQFFSDFSFSEIEGATHNFDPSLK-IGEGGYGSIYKGLLRHMQ----VAIKMLHP 561
M DF LK IG G +G + +++ A+K+L+
Sbjct: 65 KVKQMRLHREDFEI-------------LKVIGRGAFGEVA--VVKLKNADKVFAMKILNK 109
Query: 562 HSLQGPSE---FQQEIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKD 616
+ +E F++E D+L + TL A LV +Y G L LS +
Sbjct: 110 WEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE 169
Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----E 672
+ P R +A E+ + +H VH D+KP NIL+D N +L+DF +
Sbjct: 170 DRLPEEM-ARFYLA-EMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Query: 673 FLASGELTPKS---------------------------DVYSFGIILLRLLTGRP 700
+ G + D +S G+ + +L G
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 5e-14
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 31/180 (17%)
Query: 511 MPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQ- 565
M + + + + ++ KIG+G +G ++K RH + VA+K + + +
Sbjct: 1 MAKQYDSVECPFCDEVS-KYEKLAKIGQGTFGEVFKA--RHRKTGQKVALKKVLMENEKE 57
Query: 566 G-PSEFQQEIDILSKIRHPNLVTLVGACPEVWT----------LVYEYLPN---GSLEDR 611
G P +EI IL ++H N+V L+ C + LV+++ + G L +
Sbjct: 58 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV 117
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
+ R+ L + L ++H + I+H D+K AN+L+ + V KL+DF
Sbjct: 118 ------LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF 168
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 5e-14
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 45/202 (22%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591
+G G G + + + + A+KML ++E+++ + + P++V +V
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVDV 123
Query: 592 CPEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
++ +V E L G L R+ + + + + I + + +LHS
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYLHS--- 179
Query: 646 HSIVHGDLKPANILL---DANFVSKLSDF------------------------EFLASGE 678
+I H D+KP N+L N + KL+DF E L +
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 239
Query: 679 LTPKSDVYSFGIILLRLLTGRP 700
D++S G+I+ LL G P
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYP 261
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 6e-14
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 46/201 (22%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSK-IRHPNLVTLVGA 591
IG G Y + + + +M+ A+K++ +EI+IL + +HPN++TL
Sbjct: 29 DIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP----TEEIEILLRYGQHPNIITLKDV 84
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ +V E + G L D++ + S + + + + +LH+ +V
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA---QGVV 138
Query: 650 HGDLKPANILL-----DANFVSKLSDF-------------------------EFLASGEL 679
H DLKP+NIL + + ++ DF E L
Sbjct: 139 HRDLKPSNILYVDESGNPESI-RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 680 TPKSDVYSFGIILLRLLTGRP 700
D++S G++L +LTG
Sbjct: 198 DAACDIWSLGVLLYTMLTGYT 218
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 8e-14
Identities = 32/175 (18%), Positives = 56/175 (32%), Gaps = 42/175 (24%)
Query: 563 SLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTL--VYEYLPNGSLEDRLSCKDNSPP 620
S +I + N V + L + +L+D ++ + +
Sbjct: 101 SPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160
Query: 621 LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------- 671
+ I ++ + FLHS ++H DLKP+NI + V K+ DF
Sbjct: 161 REHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217
Query: 672 ----------------------------EFLASGELTPKSDVYSFGIILLRLLTG 698
E + + K D++S G+IL LL
Sbjct: 218 EEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 48/238 (20%)
Query: 500 KSRKEASSSSHMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAI 556
++R ++H P+ + D+ +E G ++ K+G G Y +++ + + +V +
Sbjct: 7 RARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 66
Query: 557 KMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTL--VGACPEVWTLVY--EYLPNGSLEDR 611
K+L P + + ++EI IL +R PN++TL + P T E++ N
Sbjct: 67 KILKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF--- 120
Query: 612 LSCKDNSPPLSWQTRIR-IATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLS 669
K L+ IR E+ L + HS I+H D+KP N+++D + +L
Sbjct: 121 ---KQLYQTLT-DYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLI 173
Query: 670 DF---EFLASG---------------EL-------TPKSDVYSFGIILLRLLTGRPAL 702
D+ EF G EL D++S G +L ++ +
Sbjct: 174 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 59/256 (23%), Positives = 91/256 (35%), Gaps = 69/256 (26%)
Query: 489 DKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL 548
V ++ K ++ P + S+++ + IG G +G +Y+
Sbjct: 25 SMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK----------VIGNGSFGVVYQAK 74
Query: 549 LRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT--------L 598
L VAIK + LQ +E+ I+ K+ H N+V L L
Sbjct: 75 LCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130
Query: 599 VYEYLP---NGSLEDRLSCKDNSPPL-----SWQTRIRIATELCSVLIFLHSCKPHSIVH 650
V +Y+P K P + +Q L L ++HS I H
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--------LFRSLAYIHS---FGICH 179
Query: 651 GDLKPANILLDAN-FVSKLSDF---------EF----------------LASGELTPKSD 684
D+KP N+LLD + V KL DF E + + T D
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 239
Query: 685 VYSFGIILLRLLTGRP 700
V+S G +L LL G+P
Sbjct: 240 VWSAGCVLAELLLGQP 255
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 64/261 (24%)
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLK-IGE 538
+ D + ++K + L + + + + D+ +K IG
Sbjct: 35 DLDFPALRKNKNI--DNFLSRYKDTINKIRDLRMKAEDYEV-------------VKVIGR 79
Query: 539 GGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVGA 591
G +G + L+RH A+K+L + S+ F +E DI++ P +V L A
Sbjct: 80 GAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 137
Query: 592 --CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+V EY+P G L + +S D R A E+ L +HS +
Sbjct: 138 FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA-EVVLALDAIHS---MGFI 190
Query: 650 HGDLKPANILLDANFVSKLSDF---------------------EFLA---------SGEL 679
H D+KP N+LLD + KL+DF ++++ G
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYY 250
Query: 680 TPKSDVYSFGIILLRLLTGRP 700
+ D +S G+ L +L G
Sbjct: 251 GRECDWWSVGVFLYEMLVGDT 271
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 57/279 (20%), Positives = 107/279 (38%), Gaps = 58/279 (20%)
Query: 458 QTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSD 517
+T +E ++ +A++ + + K+Q +M+ + + + + ++
Sbjct: 91 ETPEE-REEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNE 149
Query: 518 FSFSEIEGATHNFDPSLK-IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQQ 572
F + LK +G+G +G + L++ A+K+L + E
Sbjct: 150 FEY-------------LKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAH 194
Query: 573 ---EIDILSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRI 627
E +L RHP L L + + V EY G L LS + + R
Sbjct: 195 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----EDRA 250
Query: 628 RI-ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------- 671
R E+ S L +LHS ++V+ DLK N++LD + K++DF
Sbjct: 251 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
Query: 672 -----EFLASGELTPKS-----DVYSFGIILLRLLTGRP 700
E+LA L D + G+++ ++ GR
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 4e-12
Identities = 69/334 (20%), Positives = 121/334 (36%), Gaps = 60/334 (17%)
Query: 406 EELKRRKEFEEALAN-GKLEL-ERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKEL 463
EE K EF E + KLE E E+ + + + + L
Sbjct: 77 EEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHL 136
Query: 464 EQKIISAVELLQNYKKEQ-DELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSE 522
+K + +L Q Y +E L+ + + E+++ + + + ++ +DFS
Sbjct: 137 VKKQVPP-DLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSV-- 193
Query: 523 IEGATHNFDPSLK-IGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQ---QEIDI 576
+ IG GG+G +Y A+K L ++ E +
Sbjct: 194 -----------HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 577 LSKI---RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-A 630
LS + P +V + A P+ + + + + G L LS + +R A
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS----EADMRFYA 298
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------E 672
E+ L +H+ +V+ DLKPANILLD + ++SD
Sbjct: 299 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 673 FLASGELTPKS------DVYSFGIILLRLLTGRP 700
++A L D +S G +L +LL G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 58/222 (26%)
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
++ + ++ + RK + ++ MP+ SD+ + ++ IG
Sbjct: 9 AQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPD------RYEIRHLIG 62
Query: 538 EGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---------EIDILSKIRHPNLV 586
G YG + + + VAIK + F+ EI IL+++ H ++V
Sbjct: 63 TGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREIAILNRLNHDHVV 115
Query: 587 TLVGACP--------EVWTLVYEYLP---------NGSLEDRLSCKDNSPPLSWQTRIRI 629
++ E++ +V E L + L +
Sbjct: 116 KVLDIVIPKDVEKFDELY-VVLEIADSDFKKLFRTPVYLTELHIKT-----LLYNL---- 165
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
L + ++HS I+H DLKPAN L++ + K+ DF
Sbjct: 166 ---LVG-VKYVHS---AGILHRDLKPANCLVNQDCSVKVCDF 200
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 3e-11
Identities = 60/332 (18%), Positives = 111/332 (33%), Gaps = 59/332 (17%)
Query: 405 AEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELE 464
E+ + + + + +D + L+ Q ++ L+
Sbjct: 79 HEQHGPALQLWKDIED-----------YDTADDALRPQKAQALRAAYLEPQAQLFCSFLD 127
Query: 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIE 524
+ ++ D L +AV L ++ + S F + + E +
Sbjct: 128 AETVARAR-----AGAGDGLFQPLLRAVLA--HLGQAPFQEFLDSLYFLRFLQWKWLEAQ 180
Query: 525 GAT-HNFDPSLKIGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ---QEIDI 576
F +G GG+G ++ + A K L+ L+ +Q E I
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVF--ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 577 LSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATEL 633
L+K+ +V+L A LV + G + + D P + R ++
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT--------- 680
S L LH +I++ DLKP N+LLD + ++SD E A T
Sbjct: 299 VSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 681 --P---------KS-DVYSFGIILLRLLTGRP 700
P S D ++ G+ L ++ R
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 7e-11
Identities = 48/257 (18%), Positives = 95/257 (36%), Gaps = 61/257 (23%)
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
KK ++ ++ A + + L+K + +++ + F + +G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----DQFDRIKT------------LG 50
Query: 538 EGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTLVG 590
G +G + L++H + A+K+L + + + E IL + P LV L
Sbjct: 51 TGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 591 AC--PEVWTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
+ +V EY+ G + L R A ++ +LHS
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-----HARFYAA-QIVLTFEYLHS--- 159
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-----------------EFLASGELTPKS----- 683
+++ DLKP N+L+D +++DF E LA + K
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219
Query: 684 DVYSFGIILLRLLTGRP 700
D ++ G+++ + G P
Sbjct: 220 DWWALGVLIYEMAAGYP 236
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 7e-11
Identities = 64/326 (19%), Positives = 110/326 (33%), Gaps = 42/326 (12%)
Query: 411 RKEFEEALANGKLELERMKKQHDEVME-ELQIALDQKSLLESQIAESDQTAKELEQKIIS 469
R F E A + EL R D V E E+ +K+ + +
Sbjct: 64 RLLFREFCAT-RPELSRCVAFLDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVP 122
Query: 470 --AVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGAT 527
V ++ + ++ E L + S F + + E + T
Sbjct: 123 RQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVT 182
Query: 528 -HNFDPSLKIGEGGYGSIYKGLLRHMQV--AIKMLHPHSLQGPSEFQQ---EIDILSKIR 581
+ F +G+GG+G + +R A K L ++ E IL K+
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN 242
Query: 582 HPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLI 638
+V+L A + LV + G L+ + + R A E+C L
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP-EARAVFYAAEICCGLE 300
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------EFLASGEL 679
LH IV+ DLKP NILLD + ++SD ++A +
Sbjct: 301 DLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 680 TPKS-----DVYSFGIILLRLLTGRP 700
+ D ++ G +L ++ G+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQS 383
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 1e-10
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 68/220 (30%)
Query: 529 NFDPSLK-IGEGGYGSIYKGLLRHMQV-------AIKMLHPHSLQGPSEFQ--QEIDILS 578
F+ LK +G+G +G ++ L++ + A+K+L +L+ + E DIL
Sbjct: 25 QFEL-LKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 579 KIRHPNLVTLVGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQT 625
++ HP +V L A L+ ++L G L E+
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-------------V 128
Query: 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT- 680
+ +A EL L LHS I++ DLKP NILLD KL+DF E + +
Sbjct: 129 KFYLA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 184
Query: 681 ----------P---------KS-DVYSFGIILLRLLTGRP 700
P +S D +SFG+++ +LTG
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 55/211 (26%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS----EFQQEIDILSKIRHPNLVTL 588
G+G +G++ G + M VAIK + +Q P E Q + L+ + HPN+V L
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQ-IMQDLAVLHHPNIVQL 84
Query: 589 --------VGACPEVW-TLVYEYLPNGSLED--RL--SCKDNSPPLSWQTRIRIATELCS 635
+++ +V EY+P + R + +L
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVP----DTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDF---------EF------------ 673
+ LH ++ H D+KP N+L++ A+ KL DF E
Sbjct: 141 SIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 674 ----LASGELTPKSDVYSFGIILLRLLTGRP 700
+ T D++S G I ++ G P
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 55/237 (23%)
Query: 505 ASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH 562
S S F+S + IG G G + VAIK L
Sbjct: 2 GSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL-SR 60
Query: 563 SLQGPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLP---NGS 607
Q + ++ E+ ++ + H N++ L + +V+ +V E +
Sbjct: 61 PFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY-IVMELMDANLCQV 119
Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
++ L + L +Q LC + LHS I+H DLKP+NI++ ++ K
Sbjct: 120 IQMELD-HERMSYLLYQM-------LCG-IKHLHSA---GIIHRDLKPSNIVVKSDCTLK 167
Query: 668 LSDF------------------------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ DF E + D++S G I+ ++ G
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 62.5 bits (153), Expect = 1e-10
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 63/208 (30%)
Query: 536 IGEGGYGSIYKGLLRHMQ----VAIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTL 588
+G G +G ++ L+R A+K+L + + + E +LS + HP ++ +
Sbjct: 14 LGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 589 VGAC--PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELCSVLIF 639
G + ++ +Y+ G L R + A E+C L +
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP----------NPVAKFYAAEVCLALEY 121
Query: 640 LHSCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------EFLASGELTP- 681
LHS I++ DLKP NILLD N K++DF +++A P
Sbjct: 122 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIA-----PE 173
Query: 682 --------KS-DVYSFGIILLRLLTGRP 700
KS D +SFGI++ +L G
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYT 201
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 44/233 (18%), Positives = 73/233 (31%), Gaps = 54/233 (23%)
Query: 516 SDFSFSEIEGATHN----FDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSE- 569
+ + ++ H + I G YG++ G+ + VAIK + G +
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVN 65
Query: 570 -FQQ---------EIDILSKIRHPNLVTLVGA-CPEVWT------LVYEYLPNGSLEDRL 612
EI +L+ HPN++ L LV E + L +
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI 124
Query: 613 SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF- 671
D +S Q + L LH +VH DL P NILL N + DF
Sbjct: 125 --HDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFN 179
Query: 672 ------------EF------------LASGELTPKSDVYSFGIILLRLLTGRP 700
+ + T D++S G ++ + +
Sbjct: 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 70/222 (31%)
Query: 529 NFDPSLK-IGEGGYGSIYKGLLRHMQV-------AIKMLH-PHSLQGPSEFQQ---EIDI 576
F+ L+ +G+GGYG ++ +R + A+K+L ++ + E +I
Sbjct: 18 CFEL-LRVLGKGGYGKVF--QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 577 LSKIRHPNLVTLVGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSW 623
L +++HP +V L+ A L+ EYL G L ED
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT------------ 122
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGEL 679
+A E+ L LH I++ DLKP NI+L+ KL+DF E + G +
Sbjct: 123 -ACFYLA-EISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 680 T-----------P---------KS-DVYSFGIILLRLLTGRP 700
T P ++ D +S G ++ +LTG P
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 43/234 (18%), Positives = 73/234 (31%), Gaps = 75/234 (32%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL---- 588
+G G +G + + + A+K + P +E+DI+ + H N++ L
Sbjct: 14 TLGTGSFGIVCEVFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYF 69
Query: 589 -----VGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATE----------- 632
P + L + K S + + E
Sbjct: 70 YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLK 129
Query: 633 --------------------LCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF 671
L + F+HS I H D+KP N+L+++ KL DF
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDF 186
Query: 672 ---------EF----------------LASGELTPKSDVYSFGIILLRLLTGRP 700
E L + E TP D++S G + L+ G+P
Sbjct: 187 GSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 38/173 (21%), Positives = 71/173 (41%), Gaps = 41/173 (23%)
Query: 536 IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEFQ---QEIDILSKIRHPNLVTL 588
IG+G +G + +++ A+K ++ +E + +E+ I+ + HP LV L
Sbjct: 23 IGKGSFGKVC--IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 589 VGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATELCS 635
+ E +V + L G L E+ ++ I EL
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET-------------VKLFIC-ELVM 126
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSF 688
L +L + I+H D+KP NILLD + ++DF + L ++ + +
Sbjct: 127 ALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNI--AAMLPRETQITTM 174
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 53/207 (25%), Positives = 78/207 (37%), Gaps = 56/207 (27%)
Query: 536 IGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRH------PN 584
IG+G +G + K H VA+KM+ +Q EI IL +R N
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 585 LVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
++ ++ C + +E L + +L + L K+ S + A + L
Sbjct: 161 VIHMLENFTFRNHIC-----MTFELL-SMNLYE-LIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVS--KLSDF----------------------EF 673
LH + I+H DLKP NILL S K+ DF E
Sbjct: 214 DALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEV 270
Query: 674 LASGELTPKSDVYSFGIILLRLLTGRP 700
+ D++S G IL LLTG P
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYP 297
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 5e-10
Identities = 43/227 (18%), Positives = 76/227 (33%), Gaps = 37/227 (16%)
Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS 563
S S QF+S + IG G G + VAIK L
Sbjct: 40 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL-SRP 98
Query: 564 LQGPSEFQQ---EIDILSKIRHPNLVTL---VGACPEVWTLVYEYLPNGSLEDRLSCKDN 617
Q + ++ E+ ++ + H N+++L + YL ++ L
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 618 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------ 671
+ + LC + LHS I+H DLKP+NI++ ++ K+ DF
Sbjct: 159 MELDHERMSYLLYQMLCG-IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 672 ------------------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E + D++S G I+ ++ +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 54/236 (22%)
Query: 505 ASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH 562
+ S F+ + +G G YGS+ + + +VAIK L
Sbjct: 1 SLSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-SR 59
Query: 563 SLQGPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLP---NGS 607
Q ++ E+ +L ++H N++ L + + + LV ++
Sbjct: 60 PFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY-LVMPFMQTDLQKI 118
Query: 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667
+ + S ++ L +Q L L ++HS +VH DLKP N+ ++ + K
Sbjct: 119 MGLKFS-EEKIQYLVYQM-------LKG-LKYIHSA---GVVHRDLKPGNLAVNEDCELK 166
Query: 668 LSDF----------------------E-FLASGELTPKSDVYSFGIILLRLLTGRP 700
+ DF E L+ D++S G I+ +LTG+
Sbjct: 167 ILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 69/250 (27%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAI 556
A++++ P+ F ++ + IGEG YG + L ++VAI
Sbjct: 2 HHHHHMAAAAAAGPEMVRGQVF-DV---GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAI 57
Query: 557 KMLHPHSLQGPSEFQQ---------EIDILSKIRHPNLVTLVGACP--------EVWTLV 599
K + P F+ EI IL + RH N++ + +V+ +V
Sbjct: 58 KKISP--------FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY-IV 108
Query: 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659
+ + E L + LS ++ L ++HS +++H DLKP+N+L
Sbjct: 109 QDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLL 160
Query: 660 LDANFVSKLSDFEF-----------------------------LASGELTPKSDVYSFGI 690
L+ K+ DF L S T D++S G
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 691 ILLRLLTGRP 700
IL +L+ RP
Sbjct: 221 ILAEMLSNRP 230
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 9e-10
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHP-HSLQGPSEFQQEIDILSKI-RHPNL 585
+G G +G + + + VA+KML + E+ IL I H N+
Sbjct: 29 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 88
Query: 586 VTLVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQ 624
V L+GAC ++ E+ G+L L K N
Sbjct: 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT 130
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 49/260 (18%)
Query: 500 KSRKEASSSSHMPQFFSDFSF----------SEIEGA-THNFDPSLKIGE-GGYGSIYKG 547
K KE ++ S S+ + GA T P + I E +G++
Sbjct: 58 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 117
Query: 548 LLRHMQVAIK-MLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNG 606
L + + ++ I + K R ++ + + V E +
Sbjct: 118 LRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS--GFVEEKSLSD 175
Query: 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666
E+ L+ + I + ++ + FL S K +H DL NILL V
Sbjct: 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVV 232
Query: 667 KLSDF---------------------------EFLASGELTPKSDVYSFGIILLRLLT-G 698
K+ DF E + T +SDV+SFG++L + + G
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 292
Query: 699 R---PALGITKEVQYALDTG 715
P + I +E L G
Sbjct: 293 ASPYPGVKIDEEFCRRLKEG 312
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 9e-10
Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 66/211 (31%)
Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKIRHP 583
+G+G +G + + V A+K+L + E E +L RHP
Sbjct: 13 LGKGTFGKV-------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 584 NLVTLVGA--CPEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELC 634
L L A + V EY G L E + + R R E+
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT----------EERARFYGAEIV 115
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------EFL 674
S L +LHS +V+ D+K N++LD + K++DF E+L
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 675 ASGELTPKS-----DVYSFGIILLRLLTGRP 700
A L D + G+++ ++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 1e-09
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
+++ +A + E E R + E++ + ++ K +L+ + E EE A
Sbjct: 912 EEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLE-EEEAA 970
Query: 420 NGKLELERMKKQHDEVMEELQIALD-----------QKSLLESQIAESDQTAKELEQKII 468
KL+LE K D +++++ + ++ LLE ++++ E E+K
Sbjct: 971 RQKLQLE--KVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAK 1028
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKE 504
+ +L ++ EL++ K K +EL K +++
Sbjct: 1029 NLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRK 1064
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 5e-09
Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 4/148 (2%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKAS----ESLYAEELKRRKEFEE 416
+ + E+ ++ + K K E + + E K + + E
Sbjct: 980 TADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHES 1039
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
++ ++ L++ +K E+ + + + S L QIAE EL+ ++ E LQ
Sbjct: 1040 MISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQA 1099
Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKE 504
++ +++ A+K+ EL +
Sbjct: 1100 ALARLEDETSQKNNALKKIRELESHISD 1127
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 1e-07
Identities = 29/154 (18%), Positives = 62/154 (40%), Gaps = 11/154 (7%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
++ ++L + E E + E++ +++ + K EL+ R + E
Sbjct: 996 EDQNNKLTKERKLLE----ERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKE 1051
Query: 416 EA----LANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
E L K +LE E + ELQ Q + L++Q+A+ ++ + ++
Sbjct: 1052 EKSRQELEKIKRKLEGESSDLHEQIAELQ---AQIAELKAQLAKKEEELQAALARLEDET 1108
Query: 472 ELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
N K+ EL+ ++ E + +R +A
Sbjct: 1109 SQKNNALKKIRELESHISDLQEDLESEKAARNKA 1142
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 2e-07
Identities = 26/144 (18%), Positives = 56/144 (38%)
Query: 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGK 422
Q E + + E +AE+ + + + E + E R +E EE +
Sbjct: 888 TQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQ 947
Query: 423 LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
E ++M++Q ++ E+L+ + L+ + +D K++E I+ + KE+
Sbjct: 948 AEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERK 1007
Query: 483 ELQMERDKAVKEAEELRKSRKEAS 506
L+ E + K +
Sbjct: 1008 LLEERVSDLTTNLAEEEEKAKNLT 1031
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 24/161 (14%), Positives = 63/161 (39%), Gaps = 7/161 (4%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
L ++++ +A + K E E R K E E K +++ E
Sbjct: 1007 KLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLE 1066
Query: 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQI-------AESDQTAKELEQKII 468
++ ++ ++ Q E+ +L ++ +++ + + +ELE I
Sbjct: 1067 GESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHIS 1126
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSS 509
E L++ K +++ + ++ +E E L+ ++ ++
Sbjct: 1127 DLQEDLESEKAARNKAEKQKRDLSEELEALKTELEDTLDTT 1167
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 18/140 (12%)
Query: 368 EAENSRREAFEEALRRGKAE-KDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELE 426
+ E R+ E+ R+ + E D E I +A + +L + KE E A +LE E
Sbjct: 1049 KKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAK-KEEELQAALARLEDE 1107
Query: 427 R------------MKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
++ ++ E+L+ ++ E Q + + + L+ ++ E
Sbjct: 1108 TSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL----EDT 1163
Query: 475 QNYKKEQDELQMERDKAVKE 494
+ Q EL+ K +
Sbjct: 1164 LDTTATQQELRGSDYKDDDD 1183
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 5e-06
Identities = 20/127 (15%), Positives = 51/127 (40%)
Query: 379 EALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEE 438
L+ + E++ + ++ + KE E+ E ++++ E
Sbjct: 848 PLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETEL 907
Query: 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498
A + + L ++ E ++ E+E +I E Q + E+ ++Q + ++ EE
Sbjct: 908 YAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEE 967
Query: 499 RKSRKEA 505
+R++
Sbjct: 968 EAARQKL 974
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 4e-09
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 51/230 (22%)
Query: 512 PQFFSDFSFSEIEGA----THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ 565
P S F E+ + +G G YG++ + +VAIK L Q
Sbjct: 5 PPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQ 63
Query: 566 GPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLPNGSLEDRLS 613
++ E+ +L +RH N++ L + + + LV ++ L
Sbjct: 64 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY-LVMPFM-----GTDLG 117
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673
L + ++ L ++H+ I+H DLKP N+ ++ + K+ DF
Sbjct: 118 KLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174
Query: 674 -----------------------LASGELTPKSDVYSFGIILLRLLTGRP 700
L T D++S G I+ ++TG+
Sbjct: 175 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 5e-09
Identities = 38/201 (18%), Positives = 68/201 (33%), Gaps = 58/201 (28%)
Query: 499 RKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM--QVAI 556
+ + Q + + N+ IG G YG +Y ++ VAI
Sbjct: 3 HHHHHSSGRENLYFQGIKNVHVPD------NYIIKHLIGRGSYGYVYLAYDKNTEKNVAI 56
Query: 557 KMLHPHSLQGPSEFQQ---------EIDILSKIRHPNLVTLVGACP--------EVWTLV 599
K ++ F+ EI IL++++ ++ L E++ +V
Sbjct: 57 KKVN-------RMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY-IV 108
Query: 600 YEYLP---------NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
E L + ++ + + L F+H I+H
Sbjct: 109 LEIADSDLKKLFKTPIFLTE-----EHIKTILYNL-------LLG-ENFIHES---GIIH 152
Query: 651 GDLKPANILLDANFVSKLSDF 671
DLKPAN LL+ + K+ DF
Sbjct: 153 RDLKPANCLLNQDCSVKVCDF 173
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 5e-09
Identities = 55/271 (20%), Positives = 94/271 (34%), Gaps = 74/271 (27%)
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHNFDPS 533
+Y E + EE +++ S DF
Sbjct: 10 HDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDL------------- 56
Query: 534 LK-IGEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEF---QQEIDILSKI-RHPN 584
L+ IG G Y + L+R + A++++ + + Q E + + HP
Sbjct: 57 LRVIGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 114
Query: 585 LVTLVGAC---PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATELC 634
LV L +C V EY+ G L + +L + R + E+
Sbjct: 115 LVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----------EEHARFYSAEIS 163
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT---------- 680
L +LH I++ DLK N+LLD+ KL+D+ E L G+ T
Sbjct: 164 LALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 681 -P---------KS-DVYSFGIILLRLLTGRP 700
P S D ++ G+++ ++ GR
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 8e-09
Identities = 24/149 (16%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR-KEFEEALA 419
L + RR + L++ K E ++E ++ +L+R+ E +
Sbjct: 886 TLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYK 945
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+ ++ ++ + E+L+ +++ + E + + L+++I + L +
Sbjct: 946 SLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQT 1005
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSS 508
E+ ++ DK E E+L KE ++
Sbjct: 1006 EKKTIEEWADKYKHETEQLVSELKEQNTL 1034
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 14/158 (8%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
+ + E E +++ E ++ R+ Y L++ E +
Sbjct: 903 KRELKKLKIEARSVERYKKL--HIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYST 960
Query: 421 GKLEL----ERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
+L ER++ EE + A ++ L+ +IA+ + + + + + E
Sbjct: 961 ETEKLRSDVERLRMS----EEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADK 1016
Query: 477 YKKEQDELQMERDKAV----KEAEELRKSRKEASSSSH 510
YK E ++L E + E EEL + + +
Sbjct: 1017 YKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEIT 1054
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 5e-07
Identities = 24/147 (16%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIES-IRRAKASESLYAEELKRRKEFEEALA 419
+ +++ ++ R R ++ RR A L +++ R
Sbjct: 863 REHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKL 922
Query: 420 NGKLE--LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477
+ LE + +++++ DE +E + L++ + LE + + + +++ + E +N
Sbjct: 923 HIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNA 982
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKE 504
LQ E K KE + + +K
Sbjct: 983 TNRVLSLQEEIAKLRKELHQTQTEKKT 1009
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 8e-07
Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 14/173 (8%)
Query: 342 LQSSPPSVLDGSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASE 401
+Q + + D A + + R I+ R +
Sbjct: 822 IQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSI-IIQKHVRGWLAR 880
Query: 402 SLYAEELKRR----KEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESD 457
Y LK + +A K EL+++K + V ++ LE++I +
Sbjct: 881 VHYHRTLKAIVYLQCCYRRMMA--KRELKKLKIEARSVERYKKL----HIGLENKIMQLQ 934
Query: 458 QTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSH 510
+ E ++ LL+ + E +K + E LR S +EA ++++
Sbjct: 935 RKIDEQNKEY---KSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATN 984
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-06
Identities = 14/145 (9%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Query: 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
+ + ++ +R A +++ + Y + +R+ + + +
Sbjct: 857 KYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSV 916
Query: 424 E-LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
E +++ + + +LQ +D+ + + LE + + + +
Sbjct: 917 ERYKKLHIGLENKIMQLQRKIDE---QNKEYKSLLEKMNNLEITY---STETEKLRSDVE 970
Query: 483 ELQMERDKAVKEAEELRKSRKEASS 507
L+M ++A + ++E +
Sbjct: 971 RLRMSEEEAKNATNRVLSLQEEIAK 995
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-05
Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Query: 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKL 423
+ E + + E LR + E + + EE+ + ++ K
Sbjct: 955 EITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQ------EEIAKLRKELHQTQTEKK 1008
Query: 424 ELERMKKQHDEVMEELQIALD-QKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQD 482
+E ++ E+L L Q +LL+++ E ++ + ++I +E + +E
Sbjct: 1009 TIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETME--KKLVEETK 1066
Query: 483 ELQMERDKAVKEAE 496
+L+++ + +
Sbjct: 1067 QLELDLNDERLRYQ 1080
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 9e-09
Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 34/164 (20%)
Query: 535 KIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQ-----QEIDILSKIRH 582
IG+GG+G IY + +K+ + +E + + + + K
Sbjct: 42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIR 101
Query: 583 PNLVTLVGACPEVWT------------LVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRI 629
+ +G + ++ + G L+ + N+ S +T +++
Sbjct: 102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIY--EANAKRFSRKTVLQL 157
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK--LSDF 671
+ + +L ++H H VHGD+K +N+LL+ + L D+
Sbjct: 158 SLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDY 198
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 9e-09
Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 47/232 (20%)
Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS 563
S P F+ I + +G G YGS+ ++VA+K L
Sbjct: 7 HHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRP 65
Query: 564 LQGPSEFQQ---EIDILSKIRHPNLVTL---------VGACPEVWTLVYEYLPNGSLEDR 611
Q ++ E+ +L ++H N++ L + +V+ LV + L +
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-LVTHLMGA-DLNNI 123
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
+ C+ L+ + ++ L ++HS I+H DLKP+N+ ++ + K+ DF
Sbjct: 124 VKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176
Query: 672 ----------------------E-FLASGELTPKSDVYSFGIILLRLLTGRP 700
E L D++S G I+ LLTGR
Sbjct: 177 GLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 56/276 (20%), Positives = 95/276 (34%), Gaps = 87/276 (31%)
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQF-FSDFSFSEIEGATHNFDPSLK-IG 537
+ ++ ++ + A+ + H + +F LK +G
Sbjct: 17 GAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFEL-------------LKVLG 63
Query: 538 EGGYGSIYKGLLRHMQV-------AIKMLHPHSLQGPSEFQQ----EIDILSKIRH-PNL 585
G YG ++ L+R + A+K+L ++ ++ + E +L IR P L
Sbjct: 64 TGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 586 VTLVGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATE 632
VTL A L+ +Y+ G L E +I + E
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-------------VQIYVG-E 167
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELTPKS----- 683
+ L LH I++ D+K NILLD+N L+DF EF+A
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 684 -------------------DVYSFGIILLRLLTGRP 700
D +S G+++ LLTG
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 51/212 (24%), Positives = 77/212 (36%), Gaps = 67/212 (31%)
Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKI-RH 582
+G+G +G + M A+K+L + + E ILS H
Sbjct: 31 LGKGSFGKV-------MLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 583 PNLVTLVGAC--PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATEL 633
P L L P+ V E++ G L R + R R A E+
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----------EARARFYAAEI 133
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT--------- 680
S L+FLH I++ DLK N+LLD KL+DF E + +G T
Sbjct: 134 ISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 681 --P---------KS-DVYSFGIILLRLLTGRP 700
P + D ++ G++L +L G
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 56/209 (26%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP------ 583
IG+G +G + K + VAIK++ + Q E+ +L +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKY 116
Query: 584 NLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCS 635
+V L C LV+E L + +L D L ++ + +S + A ++C+
Sbjct: 117 YIVHLKRHFMFRNHLC-----LVFEML-SYNLYDLL--RNTNFRGVSLNLTRKFAQQMCT 168
Query: 636 VLIFLHSCKPHSIVHGDLKPANILL--DANFVSKLSDF---------------------- 671
L+FL + + I+H DLKP NILL K+ DF
Sbjct: 169 ALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSP 227
Query: 672 EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E L D++S G IL+ + TG P
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGEP 256
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 69/213 (32%)
Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKI-RH 582
IG G Y + + V A+K++ + + Q E + + H
Sbjct: 17 IGRGSYAKV-------LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 583 PNLVTLVGAC---PEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATE 632
P LV L +C V EY+ G L + +L + R + E
Sbjct: 70 PFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP----------EEHARFYSAE 118
Query: 633 LCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGELT-------- 680
+ L +LH I++ DLK N+LLD+ KL+D+ E L G+ T
Sbjct: 119 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 175
Query: 681 ---P---------KS-DVYSFGIILLRLLTGRP 700
P S D ++ G+++ ++ GR
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 32/163 (19%)
Query: 535 KIGEGGYGSIYKG----------LLRHMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHP 583
G +Y+ + + ++K+ L F Q ++
Sbjct: 49 FQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKW 108
Query: 584 NLVTLVGAC--PEVWT----------LVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIA 630
+ P LV L G SL+ LS ++ +++A
Sbjct: 109 KKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQS-ALDVSPKHVLSERSVLQVA 165
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK--LSDF 671
L L FLH + VHG++ NI +D S+ L+ +
Sbjct: 166 CRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGY 205
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 50/207 (24%), Positives = 75/207 (36%), Gaps = 57/207 (27%)
Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSK-IRH 582
+G+G +G + AIK L + + E +LS H
Sbjct: 25 LGKGSFGKV-------FLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-ATELCSVLIF 639
P L + E V EYL G L + +R A E+ L F
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD----LSRATFYAAEIILGLQF 133
Query: 640 LHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF--------------------EFLASGE 678
LHS IV+ DLK NILLD + + K++DF +++A
Sbjct: 134 LHS---KGIVYRDLKLDNILLDKDGHI-KIADFGMCKENMLGDAKTNTFCGTPDYIAPEI 189
Query: 679 LTPKS-----DVYSFGIILLRLLTGRP 700
L + D +SFG++L +L G+
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQS 216
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 25/145 (17%), Positives = 55/145 (37%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
++LA A+ + E + + A E E A + + + E E ++ +
Sbjct: 104 ERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYE 163
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+L ++ + E +++ + + LE +I K LE + + Y++
Sbjct: 164 EVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEE 223
Query: 480 EQDELQMERDKAVKEAEELRKSRKE 504
E L + +A AE +S +
Sbjct: 224 EIKVLSDKLKEAETRAEFAERSVTK 248
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 32/143 (22%), Positives = 66/143 (46%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
+ QL +A AE++ R+ E A + E D + RA+ SE AE + K
Sbjct: 142 EIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVT 201
Query: 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQ 475
L + + + E+ ++ D+ EE+++ D+ E++ ++++ +LE+ I + L
Sbjct: 202 NNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELY 261
Query: 476 NYKKEQDELQMERDKAVKEAEEL 498
K + + E D A+ + +
Sbjct: 262 AQKLKYKAISEELDHALNDMTSI 284
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 22/147 (14%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
A+A +A R + E+ L + + A E + ++ + E+ +
Sbjct: 23 DEAEADKKAAEDRSKQLEDELVSLQKKLKATED--ELDKYSEALKDAQEKLELAEKKATD 80
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+ ++ + ++ EEL A ++ + ++ E+++ A E E+ + Q +++
Sbjct: 81 AEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEK 140
Query: 481 QDELQMERDKAVKEAEELRKSRKEASS 507
+ +++ +A AE+ + +E +
Sbjct: 141 MEIQEIQLKEAKHIAEDADRKYEEVAR 167
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 22/146 (15%), Positives = 50/146 (34%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
+ + + E + E A++ E R+ ES +R + E A
Sbjct: 132 SRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCA 191
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+ E++ + + + + ++ E +I KE E + A + +K
Sbjct: 192 ELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEK 251
Query: 480 EQDELQMERDKAVKEAEELRKSRKEA 505
D+L+ E + + + + A
Sbjct: 252 SIDDLEDELYAQKLKYKAISEELDHA 277
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 22/148 (14%), Positives = 54/148 (36%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
++ + EN+ A E + AE + + + + ++ EAL +
Sbjct: 7 KMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKD 66
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+ +LE +K+ + ++ + L E ++ + + QK+ A + ++
Sbjct: 67 AQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERG 126
Query: 481 QDELQMERDKAVKEAEELRKSRKEASSS 508
++ K ++ E KEA
Sbjct: 127 MKVIESRAQKDEEKMEIQEIQLKEAKHI 154
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 20/151 (13%), Positives = 55/151 (36%)
Query: 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEE 416
D+L + ++++ + + AE D RR + E +R +
Sbjct: 52 ATEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQ 111
Query: 417 ALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQN 476
L + + ++ + Q ++ + E Q+ E+ A++ ++K L
Sbjct: 112 KLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVI 171
Query: 477 YKKEQDELQMERDKAVKEAEELRKSRKEASS 507
+ + + + + + + EL + K ++
Sbjct: 172 IESDLERAEERAELSEGKCAELEEEIKTVTN 202
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 1e-05
Identities = 20/146 (13%), Positives = 51/146 (34%), Gaps = 2/146 (1%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
++ ++ A+ + + E E L+ K + + R+ + + EE
Sbjct: 128 KVIESRAQKDEEKMEIQEIQLKEAKHIAEDAD--RKYEEVARKLVIIESDLERAEERAEL 185
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+ + ++++ V L+ Q + + ++ K L K+ A + ++
Sbjct: 186 SEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERS 245
Query: 481 QDELQMERDKAVKEAEELRKSRKEAS 506
+L+ D E + K S
Sbjct: 246 VTKLEKSIDDLEDELYAQKLKYKAIS 271
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 22/148 (14%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
L + + E+ + EAL+ + + + E ++A +E+ A +R + FEE L
Sbjct: 44 VSLQKKLKATEDELDKY-SEALKDAQEKLELAE--KKATDAEADVASLNRRIQLFEEELD 100
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
+ L ++ +E + + ++ES+ + ++ + E ++ A + ++ +
Sbjct: 101 RAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADR 160
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASS 507
+ +E+ + + E + + +
Sbjct: 161 KYEEVARKLVIIESDLERAEERAELSEG 188
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 17/83 (20%), Positives = 41/83 (49%)
Query: 425 LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDEL 484
++ +KK+ + + + ALD+ E+ ++ +K+LE +++S + L+ + E D+
Sbjct: 1 MDAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKY 60
Query: 485 QMERDKAVKEAEELRKSRKEASS 507
A ++ E K +A +
Sbjct: 61 SEALKDAQEKLELAEKKATDAEA 83
|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 22/159 (13%), Positives = 60/159 (37%), Gaps = 7/159 (4%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
+ + A A+ + R +A++ ++++ + +E E + K E
Sbjct: 72 ELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIE 131
Query: 416 EALANGKLELERMKKQHDEV---MEELQIALD----QKSLLESQIAESDQTAKELEQKII 468
+ ++E + Q E E+ + + ++ES + +++ A+ E K
Sbjct: 132 SRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCA 191
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
E ++ L+ + +K ++ ++ + K S
Sbjct: 192 ELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSD 230
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV--- 589
KIG G +G IY G + +VAIK+ + + E I ++ + +
Sbjct: 16 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWC 73
Query: 590 GACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
GA + +V E L G SLED + S +T + +A ++ S + ++HS +
Sbjct: 74 GAEGDYNVMVMELL--GPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS---KNF 126
Query: 649 VHGDLKPANILL 660
+H D+KP N L+
Sbjct: 127 IHRDVKPDNFLM 138
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 35/163 (21%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
KIG GG+G IY + + A ++ + F E+ ++ + +
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQRVAKKDCIKKWIER 102
Query: 593 --------PEVW-------------TLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIA 630
P + +V E L G L+ + T +++
Sbjct: 103 KQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKISGQ---NGTFKKSTVLQLG 157
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK--LSDF 671
+ VL ++H + VHGD+K AN+LL + L+D+
Sbjct: 158 IRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADY 197
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 53/234 (22%), Positives = 83/234 (35%), Gaps = 88/234 (37%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---------EIDILS 578
F +GEG YG + + VAIK + P F + EI IL
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIKILK 64
Query: 579 KIRHPNLVTLVGACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLS-------- 622
+H N++T+ EV+ ++ E + L +S + LS
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVY-IIQELMQT-DLHRVIS----TQMLSDDHIQYFI 118
Query: 623 WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF--------- 673
+QT L + + LH +++H DLKP+N+L+++N K+ DF
Sbjct: 119 YQT-------LRA-VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 674 ---------------------------LASGELTPKSDVYSFGIILLRLLTGRP 700
L S + + DV+S G IL L RP
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 45/220 (20%), Positives = 77/220 (35%), Gaps = 52/220 (23%)
Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---EIDILSKIR 581
+ +G GG G ++ + +VAIK + L P + EI I+ ++
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI---VLTDPQSVKHALREIKIIRRLD 66
Query: 582 HPNLVTLVGA-CPEVWTLVYEYLPNGSLED-----RLSCKD-----NSPPLSWQTRIRIA 630
H N+V + P L + L D PL +
Sbjct: 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFM 126
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDF------------------ 671
+L L ++HS +++H DLKPAN+ ++ + V K+ DF
Sbjct: 127 YQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 672 ----------E-FLASGELTPKSDVYSFGIILLRLLTGRP 700
L+ T D+++ G I +LTG+
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 67/212 (31%)
Query: 536 IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEF---QQEIDILSKI-RH 582
+G+G +G + M A+K+L + + E +L+ +
Sbjct: 28 LGKGSFGKV-------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 583 PNLVTLVGA--CPEVWTLVYEYLPNGSL------EDRLSCKDNSPPLSWQTRIRI-ATEL 633
P L L + V EY+ G L R + A E+
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK----------EPHAVFYAAEI 130
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF--------------------EF 673
L FL S I++ DLK N++LD+ K++DF ++
Sbjct: 131 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDY 187
Query: 674 LASGELTPKS-----DVYSFGIILLRLLTGRP 700
+A + + D ++FG++L +L G+
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 68/270 (25%), Positives = 102/270 (37%), Gaps = 82/270 (30%)
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLK-I 536
+ Q+ M + A A + + +S+ P SDF F LK I
Sbjct: 3 SQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKP---SDFHF-------------LKVI 46
Query: 537 GEGGYGSIYKGLLRHMQV----AIKMLHPHSLQGPSEF---QQEIDILSK-IRHPNLVTL 588
G+G +G + L RH A+K+L ++ E E ++L K ++HP LV L
Sbjct: 47 GKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 589 VGA--CPEVWTLVYEYLPNGSL-----------EDRLSCKDNSPPLSWQTRIRIATELCS 635
+ + V +Y+ G L E R R A E+ S
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR-------------ARFYAA-EIAS 150
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----EFLASGEL------TP---- 681
L +LHS +IV+ DLKP NILLD+ L+DF E + TP
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLA 207
Query: 682 ----------KS-DVYSFGIILLRLLTGRP 700
++ D + G +L +L G P
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH----PNLVTL 588
KIG G +G + G L + VAIK+ S + E ++ P +
Sbjct: 16 KIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYF 73
Query: 589 VGACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G C + +V E L G SLED D + S +T + IA +L S + ++HS +
Sbjct: 74 -GPCGKYNAMVLELL--GPSLEDLFDLCDRT--FSLKTVLMIAIQLISRMEYVHS---KN 125
Query: 648 IVHGDLKPANILL 660
+++ D+KP N L+
Sbjct: 126 LIYRDVKPENFLI 138
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 36/225 (16%), Positives = 83/225 (36%), Gaps = 76/225 (33%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKML------HPHSLQGPSEFQQEIDILSKIR----- 581
K+G G + +++ ++ + VA+K++ + + EI +L ++
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAA-------EDEIKLLQRVNDADNT 78
Query: 582 ------HPNLVTLVGA-----------CPEVWTLVYEYLPNGSLEDRLSCKDNSP-PLSW 623
+++ L+ +V+E L +L + ++ PL
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVV-----MVFEVL-GENLLALIKKYEHRGIPLI- 131
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS------KLSDF------ 671
+ +I+ +L L ++H + I+H D+KP N+L++ K++D
Sbjct: 132 YVK-QISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 188
Query: 672 ----------EFLASGEL------TPKSDVYSFGIILLRLLTGRP 700
S E+ +D++S ++ L+TG
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV--- 589
+IGEG +G I++G LL + QVAIK S + + E + + V
Sbjct: 17 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYF 74
Query: 590 GACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
G LV + L G SLED L S +T A ++ + + +H S+
Sbjct: 75 GQEGLHNVLVIDLL--GPSLEDLL--DLCGRKFSVKTVAMAAKQMLARVQSIHE---KSL 127
Query: 649 VHGDLKPANILL 660
V+ D+KP N L+
Sbjct: 128 VYRDIKPDNFLI 139
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 54.3 bits (130), Expect = 1e-07
Identities = 47/274 (17%), Positives = 96/274 (35%), Gaps = 69/274 (25%)
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATH 528
E + +++ + ++ + E + K ++ + +DF+F
Sbjct: 294 EGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNF-------- 345
Query: 529 NFDPSLK-IGEGGYGSIYKGLLRHMQV---------AIKMLHPHSLQGPSEFQQ---EID 575
L +G+G +G + M A+K+L + + + E
Sbjct: 346 -----LMVLGKGSFGKV-------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 576 ILSKI-RHPNLVTLVGA--CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRI-AT 631
+L+ + P L L + V EY+ G L + + A
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK----EPHAVFYAA 449
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
E+ L FL S I++ DLK N++LD+ K++DF
Sbjct: 450 EIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTP 506
Query: 672 EFLASGELTPKS-----DVYSFGIILLRLLTGRP 700
+++A + + D ++FG++L +L G+
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 540
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 7e-07
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLV--- 589
KIG G +G IY G + + +VAIK+ + + + E I ++ + V
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWF 71
Query: 590 GACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
G + LV + L G SLED S LS +T + +A ++ + + F+HS S
Sbjct: 72 GVEGDYNVLVMDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMINRVEFVHS---KSF 124
Query: 649 VHGDLKPANILL 660
+H D+KP N L+
Sbjct: 125 LHRDIKPDNFLM 136
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 7e-07
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 431 QHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIIS-AVELLQNYKKEQDELQMERD 489
Q D + +E + + ++ E D +K +EQ+ A + L+ + + Q E Q+E++
Sbjct: 76 QADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSE-QVEKN 134
Query: 490 KAV--KEAEELRKSRKE 504
K + +
Sbjct: 135 KINNRIADKAFYQQPDA 151
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 2e-06
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 33/110 (30%)
Query: 361 QLAQAMAEAENSR--REAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEAL 418
Q + E E+ R RE + L E DA + +E + E+A
Sbjct: 76 QADRLTQEPESIRKWREEQRKRL----QELDAASKVME---------QEWR-----EKA- 116
Query: 419 ANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
K +LE ++ E +E K+ + ++IA+ ++ + II
Sbjct: 117 ---KKDLEEWNQRQSEQVE--------KNKINNRIAD-KAFYQQPDADII 154
|
| >2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A Length = 61 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-06
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 788 YFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVP 840
+ C I +V + P ++ +E L+ ++ P+TN PL+ + +V
Sbjct: 3 HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVE 55
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 35/145 (24%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKML---HPHSLQGPSEFQQEIDILSKIRH-----PN 584
K+G+G +G + + A+K++ ++ + E DIL KI++ N
Sbjct: 42 KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA----KIEADILKKIQNDDINNNN 97
Query: 585 LVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIR-IATELCS 635
+V G C L++E L SL + + N+ + I+ E+
Sbjct: 98 IVKYHGKFMYYDHMC-----LIFEPL-GPSLYEII--TRNNYNGFHIE-DIKLYCIEILK 148
Query: 636 VLIFLHSCKPHSIVHGDLKPANILL 660
L +L + H DLKP NILL
Sbjct: 149 ALNYLRKMS---LTHTDLKPENILL 170
|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
Score = 49.8 bits (118), Expect = 4e-06
Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 8/140 (5%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
Q +EAE +R+E E +A A+ES AKA AE R E E ++
Sbjct: 691 QKILDQSEAEKARKELLEL-----EAMSMAVESTGNAKAEAESRAEA--ARIEGEGSVLQ 743
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQT-AKELEQKIISAVELLQNYKK 479
KL+ + + + + +E ++ + + + E + + A++L + +
Sbjct: 744 AKLKAQALAIETEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALG 803
Query: 480 EQDELQMERDKAVKEAEELR 499
+ + + L+
Sbjct: 804 PGTIRDLAVAGPEMQVKLLQ 823
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-06
Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 37/172 (21%)
Query: 535 KIGEGGYGSIYKGLLRHMQ---VAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP----- 583
+GEG +G + + + VA+K++ + EI +L +
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNST 76
Query: 584 -NLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIR-IATEL 633
V ++ C +V+E L S D + K+N P IR +A ++
Sbjct: 77 FRCVQMLEWFEHHGHIC-----IVFELL-GLSTYDFI--KENGFLPFRLD-HIRKMAYQI 127
Query: 634 CSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDV 685
C + FLHS K + H DLKP NIL + ++ + + D+
Sbjct: 128 CKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 9e-06
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 49/170 (28%)
Query: 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQ---------EID 575
++ K+G+G YG ++K + R VA+K + FQ EI
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREIM 60
Query: 576 ILSKIR-HPNLVTLVGACP-----EVWTLVYEYLPNGSLEDRLSCKDNSPPLS------- 622
IL+++ H N+V L+ +V+ LV++Y+ E L + L
Sbjct: 61 ILTELSGHENIVNLLNVLRADNDRDVY-LVFDYM-----ETDLHAVIRANILEPVHKQYV 114
Query: 623 -WQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
+Q + + +LHS ++H D+KP+NILL+A K++DF
Sbjct: 115 VYQL-------IKV-IKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 9e-06
Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 33/170 (19%)
Query: 535 KIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQ---EIDILSKIRHP----- 583
+GEG +G + + L QVA+K++ + EI++L KI+
Sbjct: 26 NLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENK 81
Query: 584 -NLVTLVGA-------CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS 635
V + C + +E L + + ++N P +A +LC
Sbjct: 82 FLCVLMSDWFNFHGHMC-----IAFELL-GKNTFE-FLKENNFQPYPLPHVRHMAYQLCH 134
Query: 636 VLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDV 685
L FLH + + H DLKP NIL + L + + + +
Sbjct: 135 ALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 181
|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 1e-05
Identities = 26/145 (17%), Positives = 60/145 (41%)
Query: 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALAN 420
++ Q + E + + + +K + RA+ SE AE + K L +
Sbjct: 1 RMKQLEDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKS 60
Query: 421 GKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480
+ + E+ ++ D+ EE+++ D+ E++ ++++ +LE+ I + L K +
Sbjct: 61 LEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLK 120
Query: 481 QDELQMERDKAVKEAEELRKSRKEA 505
+ E + + EEL
Sbjct: 121 YKAISEEMKQLEDKVEELLSKNYHL 145
|
| >1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 18/144 (12%), Positives = 50/144 (34%), Gaps = 9/144 (6%)
Query: 370 ENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG---KLELE 426
+ + + L A + E + A+ E ++ K E E
Sbjct: 124 KTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYKKEYE 183
Query: 427 RMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVEL------LQNYKKE 480
+K++ +++ + ++ + + ++ E+ + + E
Sbjct: 184 ELKEKIEKLSKSATESIKNRRRIHGELKTYKSPGLEVLFQGPRGSRYDEAEGRFEVINNE 243
Query: 481 QDELQMERDKAVKEAEELRKSRKE 504
++L+ E K + + +++K RKE
Sbjct: 244 TEQLKAEEKKILNQFLKIKKKRKE 267
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 35/152 (23%)
Query: 535 KIGEGGYGSIY--KGLLRHMQVAIKMLHPHSLQGPSEF-QQEIDILSKIR-----HPN-- 584
K+G G + +++ + VA+K++ S + +E EI +L +R PN
Sbjct: 44 KLGWGHFSTVWLSWDIQGKKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNRE 101
Query: 585 -LVTLVGA-----------CPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIAT 631
+V L+ C +V+E L G L K N L +I
Sbjct: 102 MVVQLLDDFKISGVNGTHIC-----MVFEVL--GHHLLK-WIIKSNYQGLPLPCVKKIIQ 153
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663
++ L +LH+ I+H D+KP NILL N
Sbjct: 154 QVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183
|
| >1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 Length = 602 | Back alignment and structure |
|---|
Score = 45.5 bits (106), Expect = 6e-05
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 1/151 (0%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKR-RKEF 414
+ L+ E EN R EA + A + +++ +A + A+ ++ +
Sbjct: 56 TAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNADAADITRQEFRLL 115
Query: 415 EEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELL 474
+ L E + E ++ L E+ ++ E++ A
Sbjct: 116 QAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISPREARSLIEQAEKRQKDAQNAD 175
Query: 475 QNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
+ E + + EL K+ A
Sbjct: 176 KKAADMLAEYERRKGILDTRLSELEKNGGAA 206
|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 8e-05
Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Query: 359 YDQLAQAMAEAENSRREAFEEAL-----RRGKAEKDAIESIRRAKA-SESLYAEELKRRK 412
+ + + E + RE E L + + +D +R K E+L + +
Sbjct: 26 FQEARDELVEFQEGSRE-LEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYA 84
Query: 413 EFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVE 472
+ + ++ + +L + + +++ + ++ LE + + ++ EQ++ A+E
Sbjct: 85 QSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIE 144
Query: 473 LLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
+ E DE + + +E R R+E +
Sbjct: 145 RNAFLESELDEKESLLVSVQRLKDEARDLRQELAV 179
|
| >3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae} Length = 267 | Back alignment and structure |
|---|
Score = 43.8 bits (102), Expect = 1e-04
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 789 FTCPIFQEVMQDPHVAAD-GFTYEAEALKGWLDSGHETS-PMT--NLPLAHKNLVPNLAL 844
TCPI + + P ++ ++ + ++ +L P + ++ ++ V + +
Sbjct: 182 LTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIM 241
Query: 845 RSAIQEWLQQH 855
+ +
Sbjct: 242 ELRCKIAKMKE 252
|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 2e-04
Identities = 21/164 (12%), Positives = 60/164 (36%), Gaps = 13/164 (7%)
Query: 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
Y Q + + + + +EE + +AE+ ++ ++ + + E E
Sbjct: 430 PGGYRLFVQKLQDLKK---KYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486
Query: 416 EALANGKLELERMKKQHDEVMEELQ-----IALDQKSLLESQIAESDQTAKELEQKIISA 470
+ + +++ E + + E + + ++S E +++ + Q +
Sbjct: 487 KEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQ 546
Query: 471 VELLQNYKKEQDEL-----QMERDKAVKEAEELRKSRKEASSSS 509
L +EQ++L Q E E ++L+ + + +
Sbjct: 547 ERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACT 590
|
| >3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486 | Back alignment and structure |
|---|
Score = 43.6 bits (101), Expect = 2e-04
Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 8/166 (4%)
Query: 355 DDNLYDQLAQAMAEAENSRREAFEEALR-RGKAEKDAIESIRRAKASESLYAEELKRRKE 413
+ Y + + + + + L R + EK + + E+ +
Sbjct: 20 EVGNYKRTVKRIDDGHRLCSD-LMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGT 78
Query: 414 FEEALANGKLELERMKKQHDEVMEELQ------IALDQKSLLESQIAESDQTAKELEQKI 467
E+A E ER+ + H EV L I QK Q+ + KE E
Sbjct: 79 VEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGF 138
Query: 468 ISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQ 513
A + KE + + A KE + + + +
Sbjct: 139 RKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNP 184
|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 | Back alignment and structure |
|---|
Score = 43.8 bits (102), Expect = 2e-04
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 12/157 (7%)
Query: 360 DQLAQAMAEAENSRREAFE---------EALRRGKAE-KDAIESIRRAKASESLYAEELK 409
+ +A + + E L + + E AI S AK + +E +
Sbjct: 499 TNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIPSANPAKTMQG--SEVVN 556
Query: 410 RRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIIS 469
K L K E E ++ V ++ + I E + EL++
Sbjct: 557 VLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTELDRVYGG 616
Query: 470 AVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEAS 506
+Q K+Q+ L + +E ++++S EA+
Sbjct: 617 LTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEAN 653
|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 4e-04
Identities = 22/121 (18%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 381 LRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQ 440
L+ + EK+ + + RRKE EE ++ + ++ +++ ++Q
Sbjct: 6 LKSAEREKEMASMKEEFTRLKEALEKSEARRKELEE-------KMVSLLQEKNDLQLQVQ 58
Query: 441 IALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500
D + E + + + +LE K+ + L++ ++ EL ++ K E EL++
Sbjct: 59 AEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKR 118
Query: 501 S 501
Sbjct: 119 D 119
|
| >3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens} Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 5e-04
Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEA 417
Y LA E E R+E E+ ++ K +A++++RRA+ +E+L+ R +
Sbjct: 99 YYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPE 158
Query: 418 LANGKLE------LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471
+ + ER ++ +E + Q A ++ + E++ ++LE V
Sbjct: 159 DSAPQASPGPSKQQERRRRSREEAQAKAQEAEAL---YQACVREANARQQDLEIAKQRIV 215
Query: 472 ELLQNYKKEQDELQMERDKAVKEA 495
++ +L + D+ ++
Sbjct: 216 SHVR-------KLVFQGDEVLRRV 232
|
| >3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Length = 371 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 12/143 (8%)
Query: 366 MAEAENSRREAFEEAL----------RRGKAEKDAIESIRRAKASESLYAEELKRRKEFE 415
++ + + E + L + G+ K+ + + R + + E LK R +
Sbjct: 141 LSLKPSEKLETVAKLLGIDEFEKCYQKMGEIVKEYEKRLERIEGELNYKEESLKARLKEM 200
Query: 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQ 475
L K +L + + D+V Q L E + + E + ++
Sbjct: 201 SNLEKEKEKLTKFVEYLDKVRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLPYSFVE 260
Query: 476 NYKKEQDELQMERDKAVKEAEEL 498
+ E+++ V + L
Sbjct: 261 --LTKDFEVRVHAPNGVLTIDNL 281
|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Length = 256 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 6e-04
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 409 KRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKII 468
+E + L + E K + EE Q S E + +++ +++K+
Sbjct: 25 PLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMS 84
Query: 469 SAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505
++E L +E D A + + + + +
Sbjct: 85 EIKS-----ERELRSLNIEEDIAKERSNQANREIENL 116
|
| >2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens} Length = 276 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 7e-04
Identities = 29/229 (12%), Positives = 77/229 (33%), Gaps = 28/229 (12%)
Query: 375 EAFEEALRRGKAEKDAIESIR-----RAKASESLYAEELKR----------RKEFEEALA 419
F+ K + + + + RA E Y+ + + F
Sbjct: 18 SGFDVLYHNMKHGQISTKELADFVRERATI-EEAYSRSMTKLAKSASNYSQLGTFAPVWD 76
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
K E++ H +++ +LQ + + ++ E ++ K+ ++++ +E +Q +
Sbjct: 77 VFKTSTEKLANCHLDLVRKLQELIKE---VQKYGEEQVKSHKKTKEEVAGTLEAVQTIQS 133
Query: 480 EQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSE---------IEGATHNF 530
LQ ++ + E + +KE ++ + + + A +F
Sbjct: 134 ITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADF 193
Query: 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK 579
+ + + I + L H++ I L + + Q +
Sbjct: 194 EQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFIN 242
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 855 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.98 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.98 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.98 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.98 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.98 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.98 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.98 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.97 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.97 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.96 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.88 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.84 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.8 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.55 | |
| 1wgm_A | 98 | Ubiquitin conjugation factor E4A; ubiquitinating e | 99.38 | |
| 2kre_A | 100 | Ubiquitin conjugation factor E4 B; U-box domain, E | 99.38 | |
| 2kr4_A | 85 | Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ri | 99.37 | |
| 2f42_A | 179 | STIP1 homology and U-box containing protein 1; cha | 99.32 | |
| 3m62_A | 968 | Ubiquitin conjugation factor E4; armadillo-like re | 99.28 | |
| 1mjh_A | 162 | Protein (ATP-binding domain of protein MJ0577); hy | 99.27 | |
| 3s3t_A | 146 | Nucleotide-binding protein, universal stress PROT | 99.24 | |
| 2gm3_A | 175 | Unknown protein; AT3G01520, putative ethylene-resp | 99.22 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.19 | |
| 3hgm_A | 147 | Universal stress protein TEAD; rossman fold, signa | 99.17 | |
| 3idf_A | 138 | USP-like protein; universal, stress, PSI, MCSG, st | 99.17 | |
| 1tq8_A | 163 | Hypothetical protein RV1636; MTCY01B2.28, structur | 99.11 | |
| 3fg9_A | 156 | Protein of universal stress protein USPA family; A | 99.1 | |
| 2yu4_A | 94 | E3 SUMO-protein ligase NSE2; SP-ring domain, struc | 99.1 | |
| 2dum_A | 170 | Hypothetical protein PH0823; conserved hypothetica | 99.08 | |
| 3dlo_A | 155 | Universal stress protein; unknown function, struct | 99.02 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.02 | |
| 2z08_A | 137 | Universal stress protein family; uncharacterized c | 99.0 | |
| 3fdx_A | 143 | Putative filament protein / universal stress PROT; | 98.99 | |
| 2bay_A | 61 | PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin l | 98.99 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.98 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.98 | |
| 3tnj_A | 150 | Universal stress protein (USP); structural genomic | 98.97 | |
| 1t1h_A | 78 | Gspef-atpub14, armadillo repeat containing protein | 98.86 | |
| 1jmv_A | 141 | USPA, universal stress protein A; chaperone; 1.85A | 98.81 | |
| 3ab8_A | 268 | Putative uncharacterized protein TTHA0350; tandem- | 98.73 | |
| 3olq_A | 319 | Universal stress protein E; structural genomics, P | 98.73 | |
| 1q77_A | 138 | Hypothetical protein AQ_178; structural genomics, | 98.71 | |
| 3loq_A | 294 | Universal stress protein; structural genomics, PSI | 98.69 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.68 | |
| 3cis_A | 309 | Uncharacterized protein; alpha/beta hydrolase, ATP | 98.67 | |
| 3loq_A | 294 | Universal stress protein; structural genomics, PSI | 98.65 | |
| 3mt0_A | 290 | Uncharacterized protein PA1789; structural genomic | 98.62 | |
| 3mt0_A | 290 | Uncharacterized protein PA1789; structural genomic | 98.52 | |
| 3olq_A | 319 | Universal stress protein E; structural genomics, P | 98.51 | |
| 3cis_A | 309 | Uncharacterized protein; alpha/beta hydrolase, ATP | 98.51 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.44 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.2 | |
| 3ab8_A | 268 | Putative uncharacterized protein TTHA0350; tandem- | 98.18 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.17 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.16 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.15 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.06 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.95 | |
| 3htk_C | 267 | E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL- | 97.89 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.83 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.73 | |
| 3ztg_A | 92 | E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mR | 97.58 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.47 | |
| 3fl2_A | 124 | E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA | 97.4 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.28 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.24 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.18 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.16 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.15 | |
| 1z6u_A | 150 | NP95-like ring finger protein isoform B; structura | 97.02 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.98 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.9 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.69 | |
| 2y43_A | 99 | E3 ubiquitin-protein ligase RAD18; DNA repair, met | 96.58 | |
| 1jm7_B | 117 | BARD1, BRCA1-associated ring domain protein 1; rin | 96.45 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 96.38 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.34 | |
| 2ckl_B | 165 | Ubiquitin ligase protein RING2; BMI1, RING1B, poly | 95.89 | |
| 3hct_A | 118 | TNF receptor-associated factor 6; cross-brace, bet | 95.82 | |
| 2ckl_A | 108 | Polycomb group ring finger protein 4; BMI1, RING1B | 95.73 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.64 | |
| 2egp_A | 79 | Tripartite motif-containing protein 34; ZF-C3HC4 d | 95.53 | |
| 3l11_A | 115 | E3 ubiquitin-protein ligase RNF168; E3 ligase, rin | 95.46 | |
| 2ecw_A | 85 | Tripartite motif-containing protein 30; metal bind | 95.45 | |
| 2ecv_A | 85 | Tripartite motif-containing protein 5; metal bindi | 95.32 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 95.31 | |
| 1jm7_A | 112 | BRCA1, breast cancer type 1 susceptibility protein | 95.12 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 94.84 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 94.7 | |
| 3hcs_A | 170 | TNF receptor-associated factor 6; cross-brace, bet | 94.59 | |
| 2csy_A | 81 | Zinc finger protein 183-like 1; ring finger protei | 94.42 | |
| 3lrq_A | 100 | E3 ubiquitin-protein ligase TRIM37; structural gen | 94.17 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 93.63 | |
| 1rmd_A | 116 | RAG1; V(D)J recombination, antibody, MAD, ring fin | 93.56 | |
| 4ayc_A | 138 | E3 ubiquitin-protein ligase RNF8; DNA damage, K63 | 93.31 | |
| 2ecy_A | 66 | TNF receptor-associated factor 3; metal binding pr | 93.16 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 92.96 | |
| 2b9c_A | 147 | Striated-muscle alpha tropomyosin; alpha-helix, co | 92.89 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 92.83 | |
| 2ocy_A | 154 | RAB guanine nucleotide exchange factor SEC2; RAB, | 92.58 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 92.23 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 92.15 | |
| 2yur_A | 74 | Retinoblastoma-binding protein 6; P53-associated c | 91.92 | |
| 3knv_A | 141 | TNF receptor-associated factor 2; cross-brace, alt | 91.8 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.34 | |
| 2djb_A | 72 | Polycomb group ring finger protein 6; PCGF6, ring | 91.11 | |
| 3qwe_A | 279 | GMIP, GEM-interacting protein; structural genomics | 89.62 | |
| 2fxo_A | 129 | Myosin heavy chain, cardiac muscle beta isoform; c | 89.58 | |
| 3ol1_A | 119 | Vimentin; structural genomics, PSI-2, protein stru | 89.03 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 88.87 | |
| 2ysl_A | 73 | Tripartite motif-containing protein 31; ring-type | 87.93 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 87.75 | |
| 2ocy_A | 154 | RAB guanine nucleotide exchange factor SEC2; RAB, | 86.13 | |
| 3swk_A | 86 | Vimentin; cytoskeleton, intermediate filament, alp | 85.65 | |
| 1g25_A | 65 | CDK-activating kinase assembly factor MAT1; ring f | 85.59 | |
| 2i1j_A | 575 | Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, | 85.4 | |
| 2efr_A | 155 | General control protein GCN4 and tropomyosin 1 Al; | 83.81 | |
| 2eqb_B | 97 | RAB guanine nucleotide exchange factor SEC2; coile | 83.29 | |
| 2ect_A | 78 | Ring finger protein 126; metal binding protein, st | 82.87 | |
| 3tnu_B | 129 | Keratin, type II cytoskeletal 5; coiled-coil, stru | 82.02 | |
| 2xeu_A | 64 | Ring finger protein 4; transcription, zinc-finger, | 81.6 | |
| 2ct2_A | 88 | Tripartite motif protein 32; zinc-finger protein H | 80.5 | |
| 2i1j_A | 575 | Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, | 80.08 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=413.55 Aligned_cols=228 Identities=24% Similarity=0.483 Sum_probs=190.8
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
++|...++||+|+||.||+|.+. +..||||+++.......+.|.+|+.+|++|+|||||+++|+|. +..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46788899999999999999874 4679999998655445678999999999999999999999994 46899
Q ss_pred EEEecCCCCHHHHhccc----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEE
Q 003033 599 VYEYLPNGSLEDRLSCK----------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~----------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL 668 (855)
|||||++|+|.++|... .....|+|..++.|+.||+.||.|||+ ++||||||||+||||+.++++||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999643 223579999999999999999999999 79999999999999999999999
Q ss_pred eecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccc
Q 003033 669 SDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLK 718 (855)
Q Consensus 669 ~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~ 718 (855)
+|||+. ..+.|+.++|||||||+||||+| |++||......+ ..+..+.
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~-- 247 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-- 247 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTC--
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--
Confidence 999742 23568999999999999999999 899997655432 2222222
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
....|...+.++.+|+.+||+.||.+||++ ++|.+.|+.+..
T Consensus 248 ------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~-~~i~~~L~~~~~ 289 (299)
T 4asz_A 248 ------VLQRPRTCPQEVYELMLGCWQREPHMRKNI-KGIHTLLQNLAK 289 (299)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred ------CCCCCccchHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHHHh
Confidence 123455566889999999999999999999 889999998854
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=409.64 Aligned_cols=231 Identities=25% Similarity=0.443 Sum_probs=190.9
Q ss_pred ccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey 602 (855)
..++|...++||+|+||.||+|.+++ .||||+++..... ..+.|.+|+.+|++++|||||+++|+|. +.++|||||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy 112 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW 112 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence 34567788999999999999998765 5999999754332 2457999999999999999999999984 468999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
|+||+|.++|... ..+++|..++.|+.|||.||.|||+ ++||||||||+||||+.++++||+|||++.
T Consensus 113 ~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 9999999999633 3469999999999999999999999 799999999999999999999999998431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH---HHHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ---YALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~---~~~~~~~~~~~~d~~~~~~p 729 (855)
.+.|+.++|||||||+||||+||++||....... ..+..+ ...|.....+
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~----~~~p~~~~~~ 263 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG----YASPDLSKLY 263 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTT----CCCCCSTTSC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcC----CCCCCccccc
Confidence 2347889999999999999999999997543322 222222 1223233345
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..++..+.+|+.+||+.||.+||++ .+|+..|+.++.
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RPs~-~ei~~~Le~l~~ 300 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERPLF-PQILSSIELLQH 300 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSCCH-HHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHhc
Confidence 5567889999999999999999999 889999998754
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=414.51 Aligned_cols=228 Identities=25% Similarity=0.471 Sum_probs=191.3
Q ss_pred CCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
.+|...++||+|+||.||+|.++ +..||||+++.......+.|.+|+.+|++|+|||||+++|+|. +.++|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46777889999999999999875 4679999998655445678999999999999999999999994 46899
Q ss_pred EEEecCCCCHHHHhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 599 VYEYLPNGSLEDRLSCKD------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
|||||++|+|.++|.... ...+|+|..++.|+.||+.||.|||+ ++||||||||+||||+.++++
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999996432 12469999999999999999999999 799999999999999999999
Q ss_pred EEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcc
Q 003033 667 KLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGK 716 (855)
Q Consensus 667 KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~ 716 (855)
||+|||+. ....|+.++|||||||+||||+| |++||......+. .+..+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g- 276 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG- 276 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT-
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence 99999842 23568889999999999999999 8999976554332 22222
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 717 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 717 ~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.....|..++.++.+|+.+||+.||.+||++ ++|++.|+.+..
T Consensus 277 -------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~-~ei~~~L~~l~~ 319 (329)
T 4aoj_A 277 -------RELERPRACPPEVYAIMRGCWQREPQQRHSI-KDVHARLQALAQ 319 (329)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCH-HHHHHHHHHHHH
T ss_pred -------CCCCCcccccHHHHHHHHHHcCcChhHCcCH-HHHHHHHHHHhh
Confidence 1223455566889999999999999999999 899999998854
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=409.40 Aligned_cols=225 Identities=24% Similarity=0.418 Sum_probs=186.6
Q ss_pred CccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
++...++||+|+||.||+|.+. ++.||||+++.... ...+.|.+|+.+|++++|||||+|+|+|. +..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556788999999999999874 36799999976533 23578999999999999999999999994 46899
Q ss_pred EEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc
Q 003033 599 VYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~ 665 (855)
|||||++|+|.++|..... ...|+|..++.|+.|||.||.|||+ ++||||||||+||||+.+++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCC
Confidence 9999999999999954321 2469999999999999999999999 79999999999999999999
Q ss_pred EEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhc
Q 003033 666 SKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTG 715 (855)
Q Consensus 666 ~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~ 715 (855)
+||+|||+. ..+.|+.++|||||||+||||+| |.+||......+. .+..+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~ 263 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 999999853 23568899999999999999999 8999976554332 22222
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 716 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 716 ~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
. ..+.|..++..+.+|+.+||+.||.+||++ .+|++.|+.+
T Consensus 264 ~--------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~-~ei~~~L~a~ 304 (308)
T 4gt4_A 264 Q--------VLPCPDDCPAWVYALMIECWNEFPSRRPRF-KDIHSRLRAW 304 (308)
T ss_dssp C--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTS
T ss_pred C--------CCCCcccchHHHHHHHHHHcCCChhHCcCH-HHHHHHHHhc
Confidence 1 123455566889999999999999999999 8898888854
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=399.43 Aligned_cols=223 Identities=21% Similarity=0.333 Sum_probs=179.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.++|..+++||+|+||.||+|... ++.||||+++..... ....|.+|+.+|++|+|||||++++++. +.+||||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999986 688999999865433 2457899999999999999999999984 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------- 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------- 673 (855)
|||+||+|.++|... ....+++.....|+.||+.||.|||+ ++||||||||+||||+.+|++||+|||+
T Consensus 103 Ey~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999999643 33468899999999999999999999 8999999999999999999999999974
Q ss_pred ------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 674 ------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 674 ------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
+.+..|+.++|||||||+||||+||++||...+......... ..... ..+...+.+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~--~~~~~----~~~~~~s~~ 252 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII--SGSFP----PVSLHYSYD 252 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HTCCC----CCCTTSCHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH--cCCCC----CCCccCCHH
Confidence 234568999999999999999999999998766544322211 11111 223345678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+|+.+||+.||.+||++ +++++
T Consensus 253 ~~~li~~~L~~dP~~R~s~-~e~l~ 276 (350)
T 4b9d_A 253 LRSLVSQLFKRNPRDRPSV-NSILE 276 (350)
T ss_dssp HHHHHHHHTCSSGGGSCCH-HHHHT
T ss_pred HHHHHHHHccCChhHCcCH-HHHhc
Confidence 9999999999999999999 66653
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=402.20 Aligned_cols=238 Identities=25% Similarity=0.364 Sum_probs=195.6
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCC-CcceeE
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRH-PNLVTL 588 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~H-pnIV~l 588 (855)
|...+++...++|...++||+|+||.||+|.+.+ +.||||+++..... ..+.|.+|+.+|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4556666677889999999999999999998754 57999999765432 24579999999999965 999999
Q ss_pred eceec---CceEEEEEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecc
Q 003033 589 VGACP---EVWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652 (855)
Q Consensus 589 ~g~~~---~~~~LV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrD 652 (855)
+|+|. +.++||||||++|+|.++|.... ....|+|..++.|+.|||.||.|||+ ++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCc
Confidence 99983 25799999999999999996432 13458999999999999999999999 8999999
Q ss_pred cccCceeeCCCCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 003033 653 LKPANILLDANFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGI 704 (855)
Q Consensus 653 LKp~NILld~~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~ 704 (855)
|||+||||+.++++||+|||++ ..+.|+.++|||||||+||||+| |++||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999853 23458889999999999999998 9999975
Q ss_pred ch---HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 705 TK---EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 705 ~~---~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.. .+...+..+. ....|...+.++.+|+.+||+.||.+|||+ .+|++.|+.+..
T Consensus 291 ~~~~~~~~~~i~~g~--------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~-~eil~~L~~llq 347 (353)
T 4ase_A 291 VKIDEEFCRRLKEGT--------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNLLQ 347 (353)
T ss_dssp CCCSHHHHHHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCC--------CCCCCccCCHHHHHHHHHHcCcChhHCcCH-HHHHHHHHHHHH
Confidence 43 2222333322 223455566889999999999999999999 889999988743
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=396.35 Aligned_cols=219 Identities=23% Similarity=0.334 Sum_probs=184.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
..|+..++||+|+||.||+|..+ ++.||||+++.......+.|.+|+.+|++++|||||+++++| .+.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 35888899999999999999986 688999999876666677899999999999999999999998 45789999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
+||+|.+++.. ..+++..+..|+.||+.||.|||+ ++||||||||+||||+.+|++||+|||++
T Consensus 154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 99999999853 358999999999999999999999 89999999999999999999999999842
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
....|+.++|||||||+||||+||++||...+........ .....+.. ..+...+.++.+
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i---~~~~~~~~-~~~~~~s~~~~d 302 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL-KNLHKVSPSLKG 302 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSSCCCC-SCGGGSCHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcCCCCCC-CccccCCHHHHH
Confidence 2356889999999999999999999999776554332111 11111111 122345678999
Q ss_pred HHHHhhccCCCCCCChHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~ev 758 (855)
|+.+||+.||.+||++ +++
T Consensus 303 li~~~L~~dP~~R~ta-~e~ 321 (346)
T 4fih_A 303 FLDRLLVRDPAQRATA-AEL 321 (346)
T ss_dssp HHHHHSCSSTTTSCCH-HHH
T ss_pred HHHHHcCCChhHCcCH-HHH
Confidence 9999999999999998 555
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=398.09 Aligned_cols=219 Identities=23% Similarity=0.331 Sum_probs=184.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
..|+..++||+|+||.||+|..+ +..||||++........+.+.+|+.+|+.++|||||+++++| .+.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46889999999999999999987 688999999877666778899999999999999999999998 45789999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
+||+|.+++.. ..+++..+..|+.||+.||.|||+ ++||||||||+||||+.+|.+||+|||++
T Consensus 231 ~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 231 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 99999999853 248999999999999999999999 89999999999999999999999999843
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
....|+.++|||||||+||||++|++||............ .....+... .+...+..+.+
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i---~~~~~~~~~-~~~~~s~~~~d 379 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLK-NLHKVSPSLKG 379 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSCCCCCS-CTTSSCHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcCCCCCCc-ccccCCHHHHH
Confidence 2356889999999999999999999999776554332211 111111111 22345678999
Q ss_pred HHHHhhccCCCCCCChHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~ev 758 (855)
|+.+||..||.+||++ .++
T Consensus 380 li~~~L~~dP~~R~ta-~el 398 (423)
T 4fie_A 380 FLDRLLVRDPAQRATA-AEL 398 (423)
T ss_dssp HHHHHSCSSTTTSCCH-HHH
T ss_pred HHHHHcCCChhHCcCH-HHH
Confidence 9999999999999998 555
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=383.47 Aligned_cols=220 Identities=23% Similarity=0.392 Sum_probs=174.5
Q ss_pred cccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec------CceEEEE
Q 003033 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP------EVWTLVY 600 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~~~~LV~ 600 (855)
....+||+|+||.||+|.+. +..||||++...... ....|.+|+.+|++|+|||||+++++|. +.+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999987 578999999754332 2457999999999999999999999873 2478999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeeccccc----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLA---- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~---- 675 (855)
|||+||+|.++|... .++++..+..|+.||+.||.|||+.. .+||||||||+||||+. +|.+||+|||++.
T Consensus 109 Ey~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999643 46999999999999999999999932 13999999999999984 7999999998431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+.|+.++|||||||+||||+||++||............ +.....+ ..++...+.++.
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~--i~~~~~~--~~~~~~~~~~~~ 260 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR--VTSGVKP--ASFDKVAIPEVK 260 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH--HTTTCCC--GGGGGCCCHHHH
T ss_pred CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHH--HHcCCCC--CCCCccCCHHHH
Confidence 245889999999999999999999999654433222211 0000111 122333456799
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||+.||.+|||+ ++++
T Consensus 261 ~li~~~L~~dP~~R~s~-~e~l 281 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSI-KDLL 281 (290)
T ss_dssp HHHHHHSCSSGGGSCCH-HHHH
T ss_pred HHHHHHccCChhHCcCH-HHHh
Confidence 99999999999999999 6654
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=391.13 Aligned_cols=224 Identities=20% Similarity=0.243 Sum_probs=184.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..+.|...++||+|+||.||+|.++ +..||||+++.... +.+|+.+|++|+|||||+++++|. +.+|||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3456888899999999999999987 68899999986432 357999999999999999999984 46899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeecccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFL------ 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~------ 674 (855)
||+||+|.++|... .+|++.....|+.||+.||.|||+ ++||||||||+||||+.+| .+||+|||++
T Consensus 131 y~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred ccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999999643 469999999999999999999999 8999999999999999988 6999999843
Q ss_pred ------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCCCCC
Q 003033 675 ------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 ------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~ 728 (855)
.+..|+.++|||||||+||||+||++||...... ...+..+. +.....
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------~~~~~~ 278 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP------PPIREI 278 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC------CGGGGS
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC------CCchhc
Confidence 2345788999999999999999999999654321 11111111 111123
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|...+..+.+|+.+||+.||.+|||+ .++++.|..+..
T Consensus 279 ~~~~s~~~~~li~~~L~~dP~~R~sa-~el~~~l~~~l~ 316 (336)
T 4g3f_A 279 PPSCAPLTAQAIQEGLRKEPVHRASA-MELRRKVGKALQ 316 (336)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHccCCHhHCcCH-HHHHHHHHHHHh
Confidence 44556889999999999999999999 788888876643
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=386.02 Aligned_cols=232 Identities=22% Similarity=0.327 Sum_probs=177.4
Q ss_pred CccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHH--HHHHHHHhcCCCcceeEeceecC------ceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQ--QEIDILSKIRHPNLVTLVGACPE------VWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~--~Ei~iL~~l~HpnIV~l~g~~~~------~~~LV~ 600 (855)
+|.+.++||+|+||.||+|.++++.||||+++.. ....+. .|+..+.+++|||||+++|+|.+ .+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4667789999999999999999999999999753 233444 45555678899999999999842 368999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC-----KPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-----~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
|||++|+|.++|.. .+++|..+.+|+.|++.||.|||+. +..+||||||||+|||||.++++||+|||+..
T Consensus 81 Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999953 3589999999999999999999973 12389999999999999999999999998531
Q ss_pred -----------------------------c------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHH------------
Q 003033 676 -----------------------------S------GELTPKSDVYSFGIILLRLLTGRPALGITKEV------------ 708 (855)
Q Consensus 676 -----------------------------~------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~------------ 708 (855)
+ +.++.++|||||||+||||+||.+||+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 0 02456899999999999999998877422110
Q ss_pred -HHHHhhcccccccCCCC-CCC-ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 709 -QYALDTGKLKNLLDPLA-GDW-PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 709 -~~~~~~~~~~~~~d~~~-~~~-p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
...+........++|.. ..+ +...+..+.+|+.+||+.||.+|||+ .+|++.|+.+...
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCH-HHHHHHHHHHHHC
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCH-HHHHHHHHHHHHH
Confidence 00011101111122211 111 12355689999999999999999999 8999999988543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=385.01 Aligned_cols=215 Identities=23% Similarity=0.320 Sum_probs=182.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..+.||+|+||.||+|... ++.||||++.+. .......+.+|+++|++|+|||||++++++. +.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 47999999999999999999986 678999999753 2234567999999999999999999999984 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
|||+||+|.++|... ..+++.....|+.||+.||.|||+ ++||||||||+||||+.++++||+|||++.
T Consensus 112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 999999999999643 469999999999999999999999 899999999999999999999999998532
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~ 731 (855)
...|+.++|||||||+||+|+||++||...+..... +..+. ..+|..
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~---------~~~p~~ 256 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE---------YDFPEK 256 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---------CCCCTT
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------CCCCcc
Confidence 235778999999999999999999999876544322 11211 234555
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+.++.+|+.+||..||.+||++ +++
T Consensus 257 ~s~~~~dli~~lL~~dp~~R~t~-~e~ 282 (311)
T 4aw0_A 257 FFPKARDLVEKLLVLDATKRLGC-EEM 282 (311)
T ss_dssp CCHHHHHHHHHHSCSSGGGSTTS-GGG
T ss_pred cCHHHHHHHHHHccCCHhHCcCh-HHH
Confidence 66789999999999999999998 554
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=372.41 Aligned_cols=216 Identities=26% Similarity=0.400 Sum_probs=175.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..+.||+|+||.||+|... ++.||||+++.... .....|.+|+.+|++++|||||++++++. +..||||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999876 68899999976532 23457999999999999999999999984 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
||| +|+|.+++... ..+++.....|+.||+.||.|||+ ++||||||||+||||+.++++||+|||++
T Consensus 93 Ey~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 78999998543 469999999999999999999999 89999999999999999999999999843
Q ss_pred ------------------ccCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhhH
Q 003033 675 ------------------ASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 675 ------------------~~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
.+..| +.++|||||||+||+|+||++||...+..... +..+. ..+|...+
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~---------~~~p~~~s 236 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV---------YTLPKFLS 236 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---------CCCCTTSC
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC---------CCCCCCCC
Confidence 22333 57899999999999999999999866543221 11211 13444566
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.++.+|+.+||+.||.+|||+ +++++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~-~eil~ 262 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISI-HEIMQ 262 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCH-HHHHH
T ss_pred HHHHHHHHHHccCChhHCcCH-HHHHc
Confidence 889999999999999999998 66643
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=381.91 Aligned_cols=214 Identities=26% Similarity=0.307 Sum_probs=174.4
Q ss_pred CCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~L 598 (855)
++|++.+.||+|+||.||+|... ++.||||+++.... .....+.+|+.+|++++|||||++++++ .+.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999863 46899999976432 2234688999999999999999999998 456899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
|||||+||+|.++|... ..+++.....|+.||+.||.|||+ ++||||||||+|||++.+|++||+|||++
T Consensus 104 vmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 99999999999999643 469999999999999999999999 89999999999999999999999999743
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
....|+.++|||||||+||||+||++||...+.......... ....+|...+
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~-------~~~~~p~~~s 250 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK-------AKLGMPQFLS 250 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-------CCCCCCTTSC
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc-------CCCCCCCcCC
Confidence 235688899999999999999999999987665433221110 0123455567
Q ss_pred HHHHHHHHHhhccCCCCCCCh
Q 003033 734 EQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.++.+|+.+||+.||.+||+.
T Consensus 251 ~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 251 PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHHHHHHHHHTCSSGGGSTTC
T ss_pred HHHHHHHHHHcccCHHHCCCC
Confidence 889999999999999999996
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=367.90 Aligned_cols=216 Identities=23% Similarity=0.391 Sum_probs=171.3
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC-----------
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE----------- 594 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----------- 594 (855)
+|+..+.||+|+||.||+|..+ +..||||+++..... ..+.|.+|+.+|++|+|||||+++++|.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 5888999999999999999986 688999999754322 24578999999999999999999998731
Q ss_pred ---ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 595 ---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 595 ---~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
.+|||||||++|+|.+++.........++.....|+.||+.||.|||+ ++||||||||+||||+.++++||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence 268999999999999999765544557788889999999999999999 89999999999999999999999999
Q ss_pred cccc-------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003033 672 EFLA-------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 714 (855)
Q Consensus 672 g~~~-------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~ 714 (855)
|++. +..|+.++|||||||+||||++ ||.........+..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~ 239 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTD 239 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHH
Confidence 8531 2457889999999999999997 67543322221111
Q ss_pred cccccccCCCCCCCCh---hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 715 GKLKNLLDPLAGDWPF---VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 715 ~~~~~~~d~~~~~~p~---~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+. ...+|. .....+.+|+.+||+.||.+||++ .+++
T Consensus 240 --~~------~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~-~eil 278 (299)
T 4g31_A 240 --VR------NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEA-INII 278 (299)
T ss_dssp --HH------TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred --Hh------cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCH-HHHh
Confidence 10 112232 233567889999999999999999 5654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-40 Score=370.92 Aligned_cols=224 Identities=24% Similarity=0.316 Sum_probs=177.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--------C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--------E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~ 594 (855)
.++|+..+.||+|+||.||+|..+ ++.||||+++..... ..+.+.+|+.+|+.|+|||||++++++. +
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999986 688999999764322 2356889999999999999999999863 3
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
.+|||||||. |+|.+++.. ..++++..+..|+.||+.||.|||+ ++||||||||+|||++.+|.+||+|||++
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeeccee
Confidence 5799999995 789999853 3579999999999999999999999 89999999999999999999999999853
Q ss_pred c------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cccccc
Q 003033 675 A------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GKLKNL 720 (855)
Q Consensus 675 ~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~~~~~ 720 (855)
. ...++.++|||||||++|||+||++||.+.+........ +.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 1 123578999999999999999999999877654432221 110000
Q ss_pred ----------------cCC-CCCCCC---hhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 721 ----------------LDP-LAGDWP---FVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 721 ----------------~d~-~~~~~p---~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+.+ ....|. ...+.++.+|+.+||..||.+|||+ +++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta-~e~ 342 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA-AAA 342 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCH-HHH
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCH-HHH
Confidence 000 000110 1234678999999999999999998 555
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=353.67 Aligned_cols=168 Identities=29% Similarity=0.407 Sum_probs=147.3
Q ss_pred cccCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEecee--cCce
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVW 596 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~ 596 (855)
...+.|++.++||+|+||.||+|..+ +..||||.+... .....+.+|+++|..+ +|||||++++++ .+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34567999999999999999999863 467999998754 3456788999999998 699999999988 4578
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEFLA 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~~~ 675 (855)
|||||||++|+|.+++. .+++.....|+.||+.||.|||+ ++||||||||+|||++.+ +.+||+|||++.
T Consensus 96 ~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 99999999999999982 48999999999999999999999 899999999999999876 899999998641
Q ss_pred -----------------------------------------------------c-CCCCcchhHHHHHHHHHHHHhCCCC
Q 003033 676 -----------------------------------------------------S-GELTPKSDVYSFGIILLRLLTGRPA 701 (855)
Q Consensus 676 -----------------------------------------------------~-~~~t~ksDVwSfGvvl~elltG~~p 701 (855)
+ ..|+.++||||+||++|||+||++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 1 2367889999999999999999999
Q ss_pred CC
Q 003033 702 LG 703 (855)
Q Consensus 702 f~ 703 (855)
|.
T Consensus 247 f~ 248 (361)
T 4f9c_A 247 FY 248 (361)
T ss_dssp SS
T ss_pred CC
Confidence 84
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=338.48 Aligned_cols=250 Identities=41% Similarity=0.734 Sum_probs=207.7
Q ss_pred cccccchhhhhcccCCcccc------ceeeccCceEEEEEEECCeEEEEEEecCCCC----CChhhHHHHHHHHHhcCCC
Q 003033 514 FFSDFSFSEIEGATHNFDPS------LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL----QGPSEFQQEIDILSKIRHP 583 (855)
Q Consensus 514 ~~~~~~~~ei~~~~~~f~~~------~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~----~~~~~f~~Ei~iL~~l~Hp 583 (855)
.+..|++.++..++.+|... ++||+|+||.||+|...+..||||++..... .....|.+|+.++.+++||
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 34678999999999999887 8999999999999999899999999975422 1245788999999999999
Q ss_pred cceeEeceec--CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 584 NLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 584 nIV~l~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
||+++++++. +..++||||+++|+|.+++.......++++..+..|+.||+.||.|||+ ++|+||||||+|||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEc
Confidence 9999999984 4689999999999999999755555679999999999999999999999 7999999999999999
Q ss_pred CCCcEEEeecccccc--------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchH------HH
Q 003033 662 ANFVSKLSDFEFLAS--------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKE------VQ 709 (855)
Q Consensus 662 ~~~~~KL~DFg~~~~--------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~------~~ 709 (855)
.++.+||+|||+... +.++.++|||||||++|+|+||.+||..... ..
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999985321 2256789999999999999999999964321 11
Q ss_pred HHHh--hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 710 YALD--TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 710 ~~~~--~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.... ...+...+++.....+...+..+.+|+.+||+.||.+||++ .+|++.|+.+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-KKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHhc
Confidence 1111 11233344444456677788899999999999999999999 899999998743
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=343.07 Aligned_cols=248 Identities=39% Similarity=0.656 Sum_probs=205.7
Q ss_pred cccchhhhhcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-
Q 003033 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP- 593 (855)
Q Consensus 516 ~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~- 593 (855)
..+.+.++...+++|.....||+|+||.||+|.+. +..||||++..........|.+|+.+|+.++||||++++++|.
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 35667788889999999999999999999999976 6889999998766556678999999999999999999999984
Q ss_pred -CceEEEEEecCCCCHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDN-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
+..++||||+++|+|.+++..... ...++|..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeec
Confidence 468999999999999999854322 2369999999999999999999999 89999999999999999999999999
Q ss_pred cccc---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch---------HHHHHHhhc
Q 003033 672 EFLA---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK---------EVQYALDTG 715 (855)
Q Consensus 672 g~~~---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~---------~~~~~~~~~ 715 (855)
|+.. .+.++.++|||||||++|+|+||++||.... +.......+
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 8532 2346788999999999999999999986422 111222334
Q ss_pred ccccccCC-CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 716 KLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 716 ~~~~~~d~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+...+++ .....+...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~ell~~L~~~l~ 315 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM-GDVLWKLEYALR 315 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHhh
Confidence 44444444 3345667788899999999999999999999 889999998754
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=374.36 Aligned_cols=224 Identities=21% Similarity=0.327 Sum_probs=183.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
++|++.+.||+|+||.||+|..+ +..||||++..........+.+|+.+|+.|+|||||+|+++|. +.+|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57999999999999999999986 6889999998655445667899999999999999999999984 4689999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC--CcEEEeecccc-------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN--FVSKLSDFEFL------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~--~~~KL~DFg~~------- 674 (855)
+||+|.++|.. ....|++..+..|+.||+.||.|||+ ++|+||||||+||||+.+ +.+||+|||+.
T Consensus 237 ~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 237 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp CCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred CCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 99999999853 23469999999999999999999999 899999999999999854 89999999843
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+..|+.++|||||||+||||++|++||..................++ ...+...+..+.
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~~ 388 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD---DSAFSGISEDGK 388 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC---SGGGTTSCHHHH
T ss_pred ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCC---cccccCCCHHHH
Confidence 335678899999999999999999999987665443222211110011 111123457899
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+|+.+||..||.+||++ .++++
T Consensus 389 dli~~~L~~dp~~R~t~-~e~l~ 410 (573)
T 3uto_A 389 DFIRKLLLADPNTRMTI-HQALE 410 (573)
T ss_dssp HHHHTTSCSSGGGSCCH-HHHHH
T ss_pred HHHHHHccCChhHCcCH-HHHhc
Confidence 99999999999999999 66654
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=341.36 Aligned_cols=241 Identities=28% Similarity=0.445 Sum_probs=194.4
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec--
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP-- 593 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~-- 593 (855)
+...++.....+|...+.||+|+||.||+|...+..||||++....... ...|.+|+.+|++++||||+++++++.
T Consensus 27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp -----CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred CCcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 3444555566789999999999999999999999999999997654322 346889999999999999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecccccCceeeCCCCcEEEeec
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~~KL~DF 671 (855)
+..++||||+++|+|.+++........+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCC
Confidence 4679999999999999999643333348999999999999999999999 67 999999999999999999999999
Q ss_pred ccc-------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 003033 672 EFL-------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 726 (855)
Q Consensus 672 g~~-------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~ 726 (855)
|+. ....++.++|||||||++|+|+||++||.............. .....
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~-----~~~~~ 258 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-----KCKRL 258 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH-----SCCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----cCCCC
Confidence 743 234467899999999999999999999986654432221110 11112
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..|...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 259 ~~~~~~~~~l~~li~~~l~~dP~~Rps~-~~ll~~L~~~~~ 298 (309)
T 3p86_A 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSF-ATIMDLLRPLIK 298 (309)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHH
Confidence 3444556789999999999999999999 899999998744
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=337.56 Aligned_cols=230 Identities=27% Similarity=0.462 Sum_probs=191.4
Q ss_pred CCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecCceEEEEEecCCCC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYLPNGS 607 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~~~~LV~Ey~~~Gs 607 (855)
++|...+.||+|+||.||+|.+.+..||||.+... .....|.+|+.+|++++||||++++|+|.+..+|||||+++|+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred hHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 46888899999999999999999999999999643 3456799999999999999999999999888999999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc-EEEeecccc------------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-SKLSDFEFL------------ 674 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-~KL~DFg~~------------ 674 (855)
|.+++......+.+++..++.++.||+.||.|||+.++++|+||||||+|||++.++. +||+|||+.
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 9999975544456889999999999999999999976678999999999999988876 799999853
Q ss_pred ----------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH--HH--HHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 675 ----------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQ--YALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 675 ----------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~--~~--~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
....++.++|||||||++|+|+||++||..... .. .....+. ....+...+..+.+|+
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li 237 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT--------RPPLIKNLPKPIESLM 237 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC--------CCCCBTTCCHHHHHHH
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC--------CCCcccccCHHHHHHH
Confidence 234578899999999999999999999964321 11 1111111 1122334457799999
Q ss_pred HHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 741 MRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.+||+.||.+||++ .++++.|+.+...
T Consensus 238 ~~~l~~dp~~Rps~-~ell~~L~~~~~~ 264 (307)
T 2eva_A 238 TRCWSKDPSQRPSM-EEIVKIMTHLMRY 264 (307)
T ss_dssp HHHTCSSGGGSCCH-HHHHHHHHHHGGG
T ss_pred HHHhcCChhhCcCH-HHHHHHHHHHHHh
Confidence 99999999999999 8999999988654
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=343.74 Aligned_cols=251 Identities=37% Similarity=0.625 Sum_probs=202.8
Q ss_pred cccccchhhhhcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEece
Q 003033 514 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGA 591 (855)
Q Consensus 514 ~~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~ 591 (855)
....|++.++...+++|...+.||+|+||.||+|... +..||||++...... ....|.+|+.++..++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3567899999999999999999999999999999865 688999999865432 34479999999999999999999999
Q ss_pred ec--CceEEEEEecCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEE
Q 003033 592 CP--EVWTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 668 (855)
Q Consensus 592 ~~--~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL 668 (855)
|. +..++||||+++|+|.+++.... ...+++|..+..|+.|++.||.|||+.+..+|+||||||+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 84 46789999999999999996543 3346999999999999999999999932239999999999999999999999
Q ss_pred eeccccc--------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-----------HHHH
Q 003033 669 SDFEFLA--------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-----------VQYA 711 (855)
Q Consensus 669 ~DFg~~~--------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-----------~~~~ 711 (855)
+|||+.. .+.++.++|||||||++|+|+||++||..... +...
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 9998542 23356789999999999999999999952110 1111
Q ss_pred HhhcccccccCC-CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 712 LDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 712 ~~~~~~~~~~d~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.....+..+.+. ....++...+..+.+|+.+||+.||.+||++ .+|++.|+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-~ell~~L~~~ 309 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM-SEVVRMLEGD 309 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH-HHHHHHHHTS
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH-HHHHHHhcCc
Confidence 112222333332 3445677788999999999999999999999 8999999853
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=345.13 Aligned_cols=266 Identities=22% Similarity=0.366 Sum_probs=199.4
Q ss_pred cCCccccceeeccCceEEEEEEECC------eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec-CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~L 598 (855)
..+|...++||+|+||.||+|.+.. .+||+|.+.... ......|.+|+.+|++++||||++++++|. +..++
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 93 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence 3568899999999999999998752 347999886543 234578999999999999999999999984 45789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
|+||+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 94 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 99999999999999643 3469999999999999999999999 79999999999999999999999999742
Q ss_pred -----------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCC
Q 003033 675 -----------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 -----------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 728 (855)
.+..++.++|||||||++|||+| |++||..... ....+..+. ....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 240 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--------RLPQ 240 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--------CCCC
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC--------CCCC
Confidence 12457889999999999999999 9999975433 222222211 1223
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc----CCCCCCccCCCCCCCCCCCCcCCCcchhcccCCCcc
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS----CGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVA 804 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~----~~~~~~~~~~~~~~~~~P~~f~CPI~qEvm~dP~ia 804 (855)
|...+..+.+|+.+||+.||.+||++ .++++.|+.+... ........ .....+.++.|.+++..+.+.|+++.
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~-~ell~~l~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~ 317 (327)
T 3poz_A 241 PPICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMARDPQRYLVIQGDER--MHLPSPTDSNFYRALMDEEDMDDVVD 317 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSCGGGSCCH-HHHHHHHHHHHTSHHHHBCCTTGGG--CCCCCTTTCHHHHHHHC------CCC
T ss_pred CccCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHHhhhhhhhhhcCCCc--cCCCCCCchHHHHhcccccccccccC
Confidence 44556789999999999999999999 8899999887431 11111111 11112334557788888888899887
Q ss_pred cCCc
Q 003033 805 ADGF 808 (855)
Q Consensus 805 ~dg~ 808 (855)
+|++
T Consensus 318 ~d~~ 321 (327)
T 3poz_A 318 ADEY 321 (327)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 7764
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=374.23 Aligned_cols=216 Identities=25% Similarity=0.315 Sum_probs=173.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHH---HHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQE---IDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~E---i~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
++|++.+.||+|+||.||+|..+ +..||||++.+.. ......+.+| +.+++.++|||||+|+++|. +.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57899999999999999999986 5789999997532 2223334444 56667789999999999984 4789
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
||||||+||+|.++|... ..|++.....|+.||+.||.|||+ ++||||||||+||||+.+|++||+|||++
T Consensus 269 lVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999643 469999999999999999999999 89999999999999999999999999742
Q ss_pred --------------------c-cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhcccccccCCCCCCCChhh
Q 003033 675 --------------------A-SGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 675 --------------------~-~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
. +..|+.++|||||||+||||+||++||...... ...+..... .....+|...
T Consensus 343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~-----~~~~~~p~~~ 417 (689)
T 3v5w_A 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TMAVELPDSF 417 (689)
T ss_dssp SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH-----HCCCCCCTTS
T ss_pred CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc-----CCCCCCCccC
Confidence 2 246899999999999999999999999643211 011111001 1112345566
Q ss_pred HHHHHHHHHHhhccCCCCCCCh
Q 003033 733 AEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+.++.+|+.+||..||.+|++.
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTC
T ss_pred CHHHHHHHHHHccCCHhHCCCC
Confidence 7889999999999999999984
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=333.04 Aligned_cols=236 Identities=23% Similarity=0.391 Sum_probs=189.9
Q ss_pred cCCccccceeeccCceEEEEEEE------CCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec----Cce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~ 596 (855)
.++|...++||+|+||.||+|.+ .+..||||++..........|.+|+.+|.+++||||++++++|. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788899999999999999985 35789999998654444567899999999999999999999983 347
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 8999999999999999543 2358999999999999999999999 899999999999999999999999997432
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH-Hhhc---------ccc
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA-LDTG---------KLK 718 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~-~~~~---------~~~ 718 (855)
...++.++|||||||++|+|+||..||......... .... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 244678999999999999999999998654322111 0000 000
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.+........|...+..+.+|+.+||+.||.+||++ .++++.|+.++..
T Consensus 244 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~el~~~L~~l~~~ 292 (295)
T 3ugc_A 244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF-RDLALRVDQIRDN 292 (295)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCH-HHHHHHHHHHHHC
T ss_pred HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHHHh
Confidence 111112223455566889999999999999999999 8999999988653
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=330.42 Aligned_cols=221 Identities=25% Similarity=0.381 Sum_probs=183.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
..+|...++||+|+||.||+|... +..||||++..........+.+|+.+++.++||||++++++| .+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 357899999999999999999864 688999999876666677899999999999999999999988 4568999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
+++|+|.+++... .+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 99 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (297)
T ss_dssp CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence 9999999999532 58999999999999999999999 79999999999999999999999999842
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
....++.++|||||||++|+|+||++||................ ......|...+..+.
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 247 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG----TPELQNPEKLSAIFR 247 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC----SCCCSCGGGSCHHHH
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----CCCCCCccccCHHHH
Confidence 13456789999999999999999999997665443322111000 011123445567899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||+.||.+||++ .+++
T Consensus 248 ~li~~~l~~dp~~Rps~-~ell 268 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSA-KELL 268 (297)
T ss_dssp HHHHHHSCSSTTTSCCH-HHHT
T ss_pred HHHHHHccCChhHCcCH-HHHh
Confidence 99999999999999999 5553
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=336.19 Aligned_cols=230 Identities=26% Similarity=0.420 Sum_probs=188.5
Q ss_pred cCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
..+|...+.||+|+||.||+|.+. +..||||+++..... ....|.+|+.+|.+++||||++++++|. +..+|
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 457888999999999999999984 356999999764322 2457899999999999999999999994 35789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 128 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 128 VTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeeCCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999953 23469999999999999999999999 899999999999999999999999998532
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|+|++ |.+||............. .......|
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~------~~~~~~~~ 276 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE------EGYRLPAP 276 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH------TTCCCCCC
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH------cCCCCCCC
Confidence 1345678999999999999999 999997654433221111 11112234
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
...+..+.+|+.+||..||.+||++ .+|++.|+.+...
T Consensus 277 ~~~~~~l~~li~~~l~~dp~~Rps~-~eil~~L~~l~~~ 314 (325)
T 3kul_A 277 MGCPHALHQLMLDCWHKDRAQRPRF-SQIVSVLDALIRS 314 (325)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHhC
Confidence 4556789999999999999999999 8999999998553
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=349.63 Aligned_cols=227 Identities=27% Similarity=0.468 Sum_probs=191.3
Q ss_pred ccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec---CceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV~Ey 602 (855)
..++|...+.||+|+||.||+|.+.+..||||+++... ..+.|.+|+.+|++++|||||+++++|. ...+|||||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 44578888999999999999999999999999998653 5678999999999999999999999973 258999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.++|.... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 269 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 344 (450)
T 1k9a_A 269 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344 (450)
T ss_dssp CTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred cCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccccc
Confidence 99999999996542 3357999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||+||||+| |++||..... +...+..+ .....|...+..+.
T Consensus 345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~--------~~~~~p~~~~~~l~ 416 (450)
T 1k9a_A 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--------YKMDAPDGCPPAVY 416 (450)
T ss_dssp --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT--------CCCCCCTTCCHHHH
T ss_pred CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--------CCCCCCCcCCHHHH
Confidence 3457889999999999999998 9999975432 22222222 11233445668899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+|+.+||..||.+||++ .++++.|+.+..
T Consensus 417 ~li~~cl~~dp~~Rpt~-~~l~~~L~~i~~ 445 (450)
T 1k9a_A 417 DVMKNCWHLDAATRPTF-LQLREQLEHIRT 445 (450)
T ss_dssp HHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCH-HHHHHHHHHHHH
Confidence 99999999999999999 899999998854
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=333.61 Aligned_cols=232 Identities=23% Similarity=0.408 Sum_probs=187.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
.++|...+.||+|+||.||+|.+. +..||+|.+..........|.+|+.+|.+++||||++++++|. +..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357888999999999999999986 6889999987654445667999999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 89 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 89 IKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred cCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999999643 3469999999999999999999999 899999999999999999999999998542
Q ss_pred --------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 003033 676 --------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 723 (855)
Q Consensus 676 --------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~ 723 (855)
...++.++|||||||++|+|++|.+||........... .......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~- 241 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-LNVRGFLD- 241 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-BCHHHHHH-
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-hhhhcccc-
Confidence 23467899999999999999999998853211000000 00000000
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
...|...+..+.+|+.+||+.||.+||++ .++++.|+.++..
T Consensus 242 --~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~~l~~~L~~l~~~ 283 (310)
T 3s95_A 242 --RYCPPNCPPSFFPITVRCCDLDPEKRPSF-VKLEHWLETLRMH 283 (310)
T ss_dssp --HTCCTTCCTTHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred --ccCCCCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHHh
Confidence 11223344678999999999999999999 8999999998654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=320.83 Aligned_cols=228 Identities=25% Similarity=0.446 Sum_probs=189.6
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEec
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYL 603 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey~ 603 (855)
.++|...+.||+|+||.||+|.+. +..||||++.... .....|.+|+.++.+++||||+++++++.+ ..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 457888999999999999999985 6789999998643 345779999999999999999999999843 578999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-------- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-------- 675 (855)
++|+|.+++.. ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 88 ~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 88 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp TTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999953 33468999999999999999999999 899999999999999999999999997432
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|+| |++||.............. ......|...+..+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 236 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYKPRLASTHV 236 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT------TCCCCCCTTSCHHH
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc------CccCCCCCcCCHHH
Confidence 2456889999999999999999 9999976554332211111 11112233446789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 237 ~~li~~~l~~~p~~Rps~-~~ll~~l~~l~~ 266 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAF-SRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHccCCcccCcCH-HHHHHHHHHHHH
Confidence 999999999999999999 899999998854
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=340.96 Aligned_cols=229 Identities=24% Similarity=0.417 Sum_probs=187.7
Q ss_pred cCCccccceeeccCceEEEEEEEC---------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
.++|...+.||+|+||.||+|.+. +..||||+++..... ....|.+|+.+|.++ +|||||+++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 457888999999999999999863 246999999765321 245689999999999 8999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
+..+|||||+++|+|.+++..... ...+++..+..++.||+.||.|||+ ++|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 468999999999999999965331 2358999999999999999999999 899999999999999
Q ss_pred CCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH--HH
Q 003033 661 DANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QY 710 (855)
Q Consensus 661 d~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~--~~ 710 (855)
+.++.+||+|||+.. ...++.++|||||||++|||+| |.+||...... ..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999999999998432 2346788999999999999999 99999754322 11
Q ss_pred HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 711 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 711 ~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+..+ .....|...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 317 ~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~-~ell~~L~~il~ 364 (370)
T 2psq_A 317 LLKEG--------HRMDKPANCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRILT 364 (370)
T ss_dssp HHHTT--------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHhcC--------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHH
Confidence 22221 1123344556789999999999999999999 899999998754
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=344.78 Aligned_cols=230 Identities=26% Similarity=0.425 Sum_probs=189.5
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
....++|...+.||+|+||.||+|.+. +..||||+++..... ....|.+|+.+|++++|||||+++|+|. +..+|
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 344567889999999999999999996 688999999754221 2346889999999999999999999994 46899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 190 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999533 2358999999999999999999999 899999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
.+.++.++|||||||++|||+| |.+||....... ..+..+. ....
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 336 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG--------RLPC 336 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC--------CCCC
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCC
Confidence 1335668999999999999998 999997654332 1222211 1223
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|...+..+.+|+.+||+.||.+||++ .++++.|+.++.
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~-~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSF-STIYQELQSIRK 374 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHHHHHh
Confidence 44456789999999999999999999 899999998854
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=332.91 Aligned_cols=235 Identities=27% Similarity=0.475 Sum_probs=192.7
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEecee
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC 592 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~ 592 (855)
..+....++|...+.||+|+||.||+|...+ ..||||+++..... ....|.+|+.+|.+++||||++++++|
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3445566789999999999999999998864 78999999865322 245689999999999999999999998
Q ss_pred c--CceEEEEEecCCCCHHHHhcccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 003033 593 P--EVWTLVYEYLPNGSLEDRLSCKDN---------------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649 (855)
Q Consensus 593 ~--~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~Iv 649 (855)
. +..+|||||+++|+|.+++..... ...+++..++.|+.||+.||.|||+ ++|+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCee
Confidence 4 468999999999999999964321 2579999999999999999999999 8999
Q ss_pred ecccccCceeeCCCCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCC
Q 003033 650 HGDLKPANILLDANFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPA 701 (855)
Q Consensus 650 HrDLKp~NILld~~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~p 701 (855)
||||||+|||++.++.+||+|||+. ....++.++|||||||++|+|+| |.+|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999742 12457889999999999999999 9999
Q ss_pred CCCchHHHH--HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 702 LGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 702 f~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|........ .+..+.. ...|...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 277 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~-~~~~~~L~~~~~ 335 (343)
T 1luf_A 277 YYGMAHEEVIYYVRDGNI--------LACPENCPLELYNLMRLCWSKLPADRPSF-CSIHRILQRMCE 335 (343)
T ss_dssp TTTSCHHHHHHHHHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHTTC
T ss_pred CCCCChHHHHHHHhCCCc--------CCCCCCCCHHHHHHHHHHcccCcccCCCH-HHHHHHHHHHHh
Confidence 976543322 2222211 12334455789999999999999999999 889999998743
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=337.54 Aligned_cols=239 Identities=25% Similarity=0.367 Sum_probs=194.2
Q ss_pred ccchhhhhcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCccee
Q 003033 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVT 587 (855)
Q Consensus 517 ~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~ 587 (855)
.+....+....++|...+.||+|+||.||+|.+. ++.||||+++..... ....|.+|+.+|.++ +|||||+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 4556667777889999999999999999999853 267999999764322 235689999999999 7999999
Q ss_pred EeceecC---ceEEEEEecCCCCHHHHhcccCC-----------------------------------------------
Q 003033 588 LVGACPE---VWTLVYEYLPNGSLEDRLSCKDN----------------------------------------------- 617 (855)
Q Consensus 588 l~g~~~~---~~~LV~Ey~~~GsL~~~L~~~~~----------------------------------------------- 617 (855)
++++|.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999843 48899999999999999964332
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 618 ----------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 618 ----------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1228999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH---HHHHHhhcccccccCCCCCCCCh
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE---VQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~---~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++|||||||++|+|+| |.+||..... ....+..+. ....|.
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 319 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--------RMRAPD 319 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--------CCCCCT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC--------CCCCCC
Confidence 2456789999999999999998 9999975432 222222211 122344
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~-~ell~~L~~~~~ 355 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNLLQ 355 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHHHHH
Confidence 455789999999999999999999 899999998743
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=319.04 Aligned_cols=226 Identities=27% Similarity=0.447 Sum_probs=181.8
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCC----ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
..+|...+.||+|+||.||+|.+.+..||||++...... ....+.+|+.++..++||||++++++|. +..++||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 457889999999999999999999999999998764322 2467899999999999999999999984 4578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC---ceecccccCceeeCC--------CCcEEEe
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS---IVHGDLKPANILLDA--------NFVSKLS 669 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~---IvHrDLKp~NILld~--------~~~~KL~ 669 (855)
||+++|+|.+++. ...+++..+..++.|++.||.|||+ ++ |+||||||+|||++. ++.+||+
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 86 EFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp ECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 9999999999984 2468999999999999999999999 56 999999999999986 7889999
Q ss_pred eccccc-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCC
Q 003033 670 DFEFLA-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 726 (855)
Q Consensus 670 DFg~~~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~ 726 (855)
|||+.. ...++.++|||||||++|+|+||++||.............. .....
T Consensus 159 Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~ 233 (271)
T 3dtc_A 159 DFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-----NKLAL 233 (271)
T ss_dssp CCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT-----SCCCC
T ss_pred cCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc-----CCCCC
Confidence 997532 24578899999999999999999999976554332221110 11112
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
..|...+..+.+|+.+||..||.+||++ .++++.|+.+
T Consensus 234 ~~~~~~~~~~~~li~~~l~~~p~~Rps~-~e~l~~L~~l 271 (271)
T 3dtc_A 234 PIPSTCPEPFAKLMEDCWNPDPHSRPSF-TNILDQLTTI 271 (271)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHC-
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCH-HHHHHHHhcC
Confidence 2344456789999999999999999999 8899988753
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=329.15 Aligned_cols=218 Identities=25% Similarity=0.350 Sum_probs=180.0
Q ss_pred ccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~~~ 605 (855)
|+...+||+|+||.||+|... +..||||++..........+.+|+.+|.+++||||++++++| .+..+|||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 666779999999999999986 689999999877666677899999999999999999999988 4568999999999
Q ss_pred CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----------
Q 003033 606 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 606 GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------- 675 (855)
|+|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 127 ~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 127 GALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 999999842 358999999999999999999999 799999999999999999999999998431
Q ss_pred ---------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHH
Q 003033 676 ---------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740 (855)
Q Consensus 676 ---------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~ 740 (855)
...++.++|||||||++|+|++|++||............ .....+. ...+...+..+.+|+
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~l~~li 275 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL---RDSPPPK-LKNSHKVSPVLRDFL 275 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSSCCC-CTTGGGSCHHHHHHH
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hcCCCCC-cCccccCCHHHHHHH
Confidence 234678899999999999999999999765543322111 1111111 111223457899999
Q ss_pred HHhhccCCCCCCChHHHHH
Q 003033 741 MRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 741 ~~Cl~~dP~~RPs~~~evl 759 (855)
.+||..||.+||++ .+++
T Consensus 276 ~~~l~~dp~~Rps~-~ell 293 (321)
T 2c30_A 276 ERMLVRDPQERATA-QELL 293 (321)
T ss_dssp HHHSCSSTTTSCCH-HHHH
T ss_pred HHHccCChhhCcCH-HHHh
Confidence 99999999999999 6664
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=327.95 Aligned_cols=231 Identities=25% Similarity=0.419 Sum_probs=188.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||.+....... ...|.+|+.++.+++||||+++++++. +..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 457999999999999999999876 5789999987554333 356889999999999999999999984 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... .++++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999999543 368999999999999999999999 899999999999999999999999998532
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
...++.++|||||||++|+|+||++||............ +..........++...+
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 241 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH--IQDSVPNVTTDVRKDIP 241 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH--HSSCCCCHHHHSCTTSC
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--hhccCCCcchhcccCCC
Confidence 234677899999999999999999999876654433221 11111111112223345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
..+.+++.+||+.||.+||+..+++.+.|+.+
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 78999999999999999996668898888865
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=323.93 Aligned_cols=231 Identities=29% Similarity=0.466 Sum_probs=186.1
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCCh-------hhHHHHHHHHHhcCCCcceeEeceecCce
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP-------SEFQQEIDILSKIRHPNLVTLVGACPEVW 596 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~-------~~f~~Ei~iL~~l~HpnIV~l~g~~~~~~ 596 (855)
..++|...+.||+|+||.||+|.+. +..||||++........ ..|.+|+.++.+++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3468999999999999999999985 68899999976543322 57899999999999999999999998888
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecccccCceeeCCCCc-----EEEe
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLDANFV-----SKLS 669 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~-----~KL~ 669 (855)
++||||+++|+|.+++.. ....+++..+..++.|++.||.|||+ ++ |+||||||+|||++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 999999999999998853 33579999999999999999999999 67 999999999999987776 9999
Q ss_pred eccccc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 670 DFEFLA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 670 DFg~~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
|||+.. ...++.++|||||||++|+|++|++||................ ....
T Consensus 172 Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~ 248 (287)
T 4f0f_A 172 DFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE---EGLR 248 (287)
T ss_dssp CCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH---SCCC
T ss_pred CCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc---cCCC
Confidence 997431 2235678999999999999999999996543211110000000 0112
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+...+..+.+|+.+||+.||.+||++ .++++.|+.+
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll~~L~~l 287 (287)
T 4f0f_A 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHF-SYIVKELSEL 287 (287)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTC
T ss_pred CCCCcccCHHHHHHHHHHhcCChhhCcCH-HHHHHHHHhC
Confidence 23444556789999999999999999999 8899888753
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=328.13 Aligned_cols=228 Identities=21% Similarity=0.318 Sum_probs=178.8
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHh--cCCCcceeEeceec------CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACP------EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~--l~HpnIV~l~g~~~------~~~~L 598 (855)
.++|...+.||+|+||.||+|.+.+..||||++... ....+.+|.+++.. ++||||+++++++. ...++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 457899999999999999999999999999999653 34567788888877 78999999999862 24789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecccccCceeeCCCCcEEEee
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH--------SCKPHSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
||||+++|+|.+++. ...+++..+..|+.||+.||.||| + ++|+||||||+|||++.++.+||+|
T Consensus 84 v~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECC
T ss_pred ehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEee
Confidence 999999999999994 236999999999999999999999 6 7999999999999999999999999
Q ss_pred ccccc-----------------------------cC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCc
Q 003033 671 FEFLA-----------------------------SG------ELTPKSDVYSFGIILLRLLTG----------RPALGIT 705 (855)
Q Consensus 671 Fg~~~-----------------------------~~------~~t~ksDVwSfGvvl~elltG----------~~pf~~~ 705 (855)
||+.. .. .++.++|||||||++|||+|| .+||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 98531 00 123589999999999999999 8888432
Q ss_pred h----HHHHHHhhcccccccCCCCC-CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 706 K----EVQYALDTGKLKNLLDPLAG-DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 706 ~----~~~~~~~~~~~~~~~d~~~~-~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
. .................... ..+...+..+.+|+.+||+.||.+||++ .+|++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA-LRIKKTLTKI 300 (301)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCH-HHHHHHHHHH
T ss_pred CCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCH-HHHHHHHhcc
Confidence 1 11111110000000001111 1123467889999999999999999999 8999999865
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=349.79 Aligned_cols=233 Identities=28% Similarity=0.474 Sum_probs=194.0
Q ss_pred hhhhhcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceE
Q 003033 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWT 597 (855)
Q Consensus 520 ~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~ 597 (855)
...+....++|...+.||+|+||.||+|.+. +..||||+++... ...+.|.+|+.+|++++|||||+++++|. +..+
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~ 258 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY 258 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCE
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccE
Confidence 3445566778999999999999999999987 5789999998654 35778999999999999999999999985 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
|||||+++|+|.++|.... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 259 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 9999999999999995321 2358899999999999999999999 799999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
.+.++.++|||||||+||||+| |++||....... ..+..+. ....
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~--------~~~~ 406 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY--------RMPR 406 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC--------CCCC
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCC
Confidence 2457889999999999999999 999997654332 2222221 1122
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
|...+..+.+|+.+||..||.+||++ ++|+..|+.+.
T Consensus 407 ~~~~~~~l~~li~~cl~~dp~~RPt~-~~i~~~L~~~~ 443 (454)
T 1qcf_A 407 PENCPEELYNIMMRCWKNRPEERPTF-EYIQSVLDDFY 443 (454)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTSS
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCH-HHHHHHHHHHH
Confidence 34456789999999999999999999 89999999763
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=319.12 Aligned_cols=230 Identities=20% Similarity=0.366 Sum_probs=187.1
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec----CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV~ 600 (855)
.++|...+.||+|+||.||+|.+.+..||||++...... ....|.+|+.+|++++||||++++++|. ...++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 346888999999999999999999999999999865432 2356899999999999999999999984 4578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecccccCceeeCCCCcEEEeeccccc---
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||+++|+|.+++... ....+++..+..|+.||+.||.|||+ ++ |+||||||+|||++.++.+||+||++..
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999643 23469999999999999999999999 56 9999999999999999999999886421
Q ss_pred -----------------cC---CCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -----------------SG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -----------------~~---~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.. .++.++|||||||++|+|+||++||............. ........|...+..
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 239 (271)
T 3kmu_A 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA-----LEGLRPTIPPGISPH 239 (271)
T ss_dssp CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHH-----HSCCCCCCCTTCCHH
T ss_pred ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHH-----hcCCCCCCCCCCCHH
Confidence 11 12337999999999999999999997655433221110 011122344455678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+.+|+.+||+.||.+||++ .++++.|+.+.
T Consensus 240 ~~~li~~~l~~~p~~Rps~-~~il~~L~~l~ 269 (271)
T 3kmu_A 240 VSKLMKICMNEDPAKRPKF-DMIVPILEKMQ 269 (271)
T ss_dssp HHHHHHHHTCSSGGGSCCH-HHHHHHHHHHC
T ss_pred HHHHHHHHcCCChhhCcCH-HHHHHHHHHhh
Confidence 9999999999999999999 89999998763
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=335.35 Aligned_cols=235 Identities=21% Similarity=0.330 Sum_probs=183.3
Q ss_pred hcccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC------ceE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE------VWT 597 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------~~~ 597 (855)
.-..++|...++||+|+||.||+|.+.+..||||++.... .....+.+|+.+|.+++|||||+++++|.+ .++
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp EETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred ccchhhchhhheecccCceEEEEEEECCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 3445679999999999999999999999999999996532 123456678999999999999999999843 258
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC----------CceecccccCceeeCCCCcEE
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH----------SIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~----------~IvHrDLKp~NILld~~~~~K 667 (855)
|||||+++|+|.+++.. ..++|..+..|+.||+.||.|||+ . +|+||||||+|||++.++.+|
T Consensus 99 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 99999999999999953 248999999999999999999998 6 999999999999999999999
Q ss_pred Eeecccccc--------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchH--------
Q 003033 668 LSDFEFLAS--------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKE-------- 707 (855)
Q Consensus 668 L~DFg~~~~--------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-------- 707 (855)
|+|||+... ..++.++|||||||++|||+||++||.....
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 999985410 1223467999999999999999999964211
Q ss_pred -------HHHHHhhcccccccCC-CCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 708 -------VQYALDTGKLKNLLDP-LAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 708 -------~~~~~~~~~~~~~~d~-~~~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
....... .......+ ....|+ ...+..+.+|+.+||+.||.+||++ .+|++.|+.+...
T Consensus 252 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-~ell~~L~~l~~~ 319 (322)
T 3soc_A 252 EIGQHPSLEDMQEV-VVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA-GCVGERITQMQRL 319 (322)
T ss_dssp HHCSSCCHHHHHHH-HTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred hhccCCchhhhhhh-hhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHHH
Confidence 0000000 00011111 111111 2345679999999999999999999 8999999988653
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=323.97 Aligned_cols=230 Identities=27% Similarity=0.443 Sum_probs=185.5
Q ss_pred cccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE 601 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~E 601 (855)
...++|...++||+|+||.||+|.+.+ .||||+++..... ....|.+|+.+|++++||||+.+++++. +..++|||
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e 99 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ 99 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence 345689999999999999999998765 5999999765432 2356899999999999999999999874 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 100 ~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 100 WCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp CCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred ecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccc
Confidence 9999999999953 33569999999999999999999999 899999999999999999999999998431
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH---HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ---YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~---~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++|+.||....... ..+..+.... ....+
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~ 250 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP----DLSKV 250 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC----CTTSS
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc----chhhc
Confidence 3346778999999999999999999997543322 2222322221 11223
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+...+..+.+|+.+||..||.+||++ .++++.|+.+
T Consensus 251 ~~~~~~~l~~li~~~l~~~p~~Rps~-~ell~~L~~l 286 (289)
T 3og7_A 251 RSNCPKRMKRLMAECLKKKRDERPSF-PRILAEIEEL 286 (289)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHHH
Confidence 33455789999999999999999999 8899999876
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=341.08 Aligned_cols=227 Identities=27% Similarity=0.465 Sum_probs=184.2
Q ss_pred cCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
..+|...+.||+|+||.||+|.+. +..||||+++.... .....|.+|+.+|.+++||||++++|+|. +..+|
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457999999999999999999875 46799999976432 12457999999999999999999999994 46789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 124 v~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999953 33469999999999999999999999 799999999999999999999999997431
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~ 727 (855)
...++.++|||||||++|||++ |++||........ .+..+ ....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~--------~~~~ 270 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG--------YRLP 270 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT--------EECC
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--------CCCC
Confidence 2346788999999999999998 9999975543322 12211 1112
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+...+..+.+|+.+||+.||.+||++ .+|++.|+.+..
T Consensus 271 ~~~~~~~~l~~li~~cl~~dp~~RPs~-~~i~~~L~~~~~ 309 (373)
T 2qol_A 271 PPMDCPAALYQLMLDCWQKDRNNRPKF-EQIVSILDKLIR 309 (373)
T ss_dssp CCTTCBHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHhCcChhhCcCH-HHHHHHHHHHHh
Confidence 233456789999999999999999999 899999998854
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=331.76 Aligned_cols=236 Identities=23% Similarity=0.395 Sum_probs=183.5
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP 593 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~ 593 (855)
.++....++|...+.||+|+||.||+|.+.. ..||||++..... .....|.+|+.++++++||||+++++++.
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 95 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence 3444566789999999999999999998763 2799999976532 23467999999999999999999999983
Q ss_pred C--c------eEEEEEecCCCCHHHHhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC
Q 003033 594 E--V------WTLVYEYLPNGSLEDRLSCKD---NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 662 (855)
Q Consensus 594 ~--~------~~LV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~ 662 (855)
. . .++||||+++|+|.+++.... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.
T Consensus 96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~ 172 (323)
T 3qup_A 96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAE 172 (323)
T ss_dssp CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECT
T ss_pred ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcC
Confidence 2 2 289999999999999985322 22368999999999999999999999 79999999999999999
Q ss_pred CCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HH
Q 003033 663 NFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--AL 712 (855)
Q Consensus 663 ~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~ 712 (855)
++.+||+|||+.. ...++.++|||||||++|+|+| |.+||........ .+
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~ 252 (323)
T 3qup_A 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL 252 (323)
T ss_dssp TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH
T ss_pred CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 9999999998431 2346789999999999999999 9999975443221 11
Q ss_pred hhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 713 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 713 ~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
..+ .....+...+..+.+|+.+||+.||.+||++ .++++.|+.+...
T Consensus 253 ~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~l~~~l~~ 299 (323)
T 3qup_A 253 IGG--------NRLKQPPECMEEVYDLMYQCWSADPKQRPSF-TCLRMELENILGH 299 (323)
T ss_dssp HTT--------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHHHHC
T ss_pred hcC--------CCCCCCCccCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHHH
Confidence 111 1122334455789999999999999999999 8999999988553
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=317.70 Aligned_cols=228 Identities=26% Similarity=0.491 Sum_probs=188.5
Q ss_pred ccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV~Ey 602 (855)
..++|...+.||+|+||.||+|.+.+ ..||||++..... ....+.+|+.++.+++||||++++++|.+ ..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 45678999999999999999998875 5799999976543 45779999999999999999999999954 57899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ...+++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999999543 2358999999999999999999999 899999999999999999999999998532
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||++|+|+| |++||................ ....|...+..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 233 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH------RLYRPHLASDT 233 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC------CCCCCTTSCHH
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC------CCCCCCcChHH
Confidence 1235678999999999999999 999997665443322211111 11123334578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+.+|+.+||+.||.+||++ .++++.|+.++
T Consensus 234 l~~li~~~l~~~p~~Rps~-~~ll~~L~~l~ 263 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTF-QQLLSSIEPLR 263 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCH-HHHHHHHGGGC
T ss_pred HHHHHHHHcCCChhhCcCH-HHHHHHHHHhh
Confidence 9999999999999999999 89999999874
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=329.32 Aligned_cols=233 Identities=27% Similarity=0.436 Sum_probs=187.8
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEeceec
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP 593 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~ 593 (855)
+....++|...+.||+|+||.||+|.+. +..||||++.... ......+.+|+.+|.++ +||||++++++|.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 4455678999999999999999999872 3579999997643 23456799999999999 8999999999984
Q ss_pred --CceEEEEEecCCCCHHHHhcccCCC--------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceec
Q 003033 594 --EVWTLVYEYLPNGSLEDRLSCKDNS--------------------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651 (855)
Q Consensus 594 --~~~~LV~Ey~~~GsL~~~L~~~~~~--------------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHr 651 (855)
+..+|||||+++|+|.+++...... ..+++..+..|+.||+.||.|||+ ++|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccC
Confidence 4689999999999999999643321 348999999999999999999999 899999
Q ss_pred ccccCceeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 003033 652 DLKPANILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALG 703 (855)
Q Consensus 652 DLKp~NILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~ 703 (855)
||||+|||++.++.+||+|||+.. .+.++.++|||||||++|+|+| |.+||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 999999999999999999997531 2457889999999999999998 999997
Q ss_pred CchH---HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 704 ITKE---VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 704 ~~~~---~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.... ....+..+ .....|...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 277 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~l~~~~~ 334 (344)
T 1rjb_A 277 GIPVDANFYKLIQNG--------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSF-PNLTSFLGCQLA 334 (344)
T ss_dssp TCCCSHHHHHHHHTT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHC-
T ss_pred cCCcHHHHHHHHhcC--------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHHHHHH
Confidence 5432 22222221 1122344456789999999999999999999 899999998744
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=334.01 Aligned_cols=219 Identities=26% Similarity=0.397 Sum_probs=181.5
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
...++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|+.++||||+++++++. +..++
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 34568999999999999999999974 688999999764322 2456889999999999999999999984 46889
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999998543 358999999999999999999999 899999999999999999999999998542
Q ss_pred ---------------------cCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChh
Q 003033 676 ---------------------SGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ---------------------~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~ 731 (855)
+..+ +.++|||||||++|+|+||++||...+.... .+..+. ...|..
T Consensus 166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~---------~~~p~~ 236 (328)
T 3fe3_A 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---------YRIPFY 236 (328)
T ss_dssp SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------CCCCTT
T ss_pred CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CCCCCC
Confidence 1223 4789999999999999999999987654322 222221 123445
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+..+.+|+.+||..||.+||++ ++++
T Consensus 237 ~s~~~~~li~~~L~~dP~~R~t~-~eil 263 (328)
T 3fe3_A 237 MSTDCENLLKRFLVLNPIKRGTL-EQIM 263 (328)
T ss_dssp SCHHHHHHHHHHCCSSTTTSCCH-HHHT
T ss_pred CCHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 56789999999999999999999 6653
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-36 Score=319.48 Aligned_cols=231 Identities=24% Similarity=0.413 Sum_probs=187.6
Q ss_pred hhcccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC--ceEEE
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLV 599 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~~~LV 599 (855)
+....++|...+.||+|+||.||+|.+.+ ..||||++.... .....|.+|+.++.+++||||++++++|.+ ..++|
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp TBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred ccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 33455689999999999999999998875 679999998653 245779999999999999999999999953 57899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 98 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999999999542 3459999999999999999999999 899999999999999999999999997432
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++|||||||++|+|+| |++||.............. ......|...
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~ 246 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ------GLRLYRPHLA 246 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCCCTTC
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc------ccCCCCCCcC
Confidence 2457789999999999999998 9999976554332221111 1111223344
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+..+.+|+.+||+.||.+||++ .++++.|+.+.
T Consensus 247 ~~~l~~li~~~l~~~p~~Rps~-~~ll~~L~~~~ 279 (283)
T 3gen_A 247 SEKVYTIMYSCWHEKADERPTF-KILLSNILDVM 279 (283)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCH-HHHHHHHHHHh
Confidence 5789999999999999999999 88999988774
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=322.11 Aligned_cols=227 Identities=25% Similarity=0.379 Sum_probs=183.2
Q ss_pred ccCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-CceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~L 598 (855)
..++|...+.||+|+||.||+|.+. +..||||.+...... ....|.+|+.++++++||||+++++++. +..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~l 92 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 92 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEE
Confidence 4567899999999999999999875 246999998754322 2456889999999999999999999984 46789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 93 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccC
Confidence 99999999999999643 3468999999999999999999999 799999999999999999999999998431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|+|++ |.+||....... ..+..+. ....+
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~--------~~~~~ 239 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE--------RLPMP 239 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--------CCCCC
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC--------CCCCC
Confidence 2456778999999999999997 999997543321 1222211 11233
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+..+.+|+.+||..||.+||++ .++++.|+.+.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rps~-~~l~~~l~~~~ 275 (281)
T 1mp8_A 240 PNCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLSTIL 275 (281)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHH
Confidence 4456789999999999999999999 89999998874
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=333.57 Aligned_cols=234 Identities=25% Similarity=0.402 Sum_probs=191.5
Q ss_pred hcccCCccccceeeccCceEEEEEEECC---------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEecee
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGAC 592 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~ 592 (855)
....++|...++||+|+||.||+|...+ ..||||++...... ....+.+|+.++.++ +|||||+++++|
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 3445689999999999999999998642 57999999765322 235688999999999 899999999999
Q ss_pred c--CceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCc
Q 003033 593 P--EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657 (855)
Q Consensus 593 ~--~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~N 657 (855)
. +..+|||||+++|+|.+++..... ...+++..+..|+.||+.||.|||+ ++|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcce
Confidence 4 468999999999999999964331 2459999999999999999999999 799999999999
Q ss_pred eeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH
Q 003033 658 ILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ 709 (855)
Q Consensus 658 ILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~ 709 (855)
||++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||.......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~ 301 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999998532 2346778999999999999999 999997654332
Q ss_pred H--HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 710 Y--ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 710 ~--~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
. .+..+ .....|...+..+.+|+.+||+.||.+||++ .+|++.|+.+....
T Consensus 302 ~~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 302 LFKLLKEG--------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHTT--------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHHS
T ss_pred HHHHHHcC--------CCCCCCccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHHHH
Confidence 2 12221 1122334456789999999999999999999 89999999986644
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=316.92 Aligned_cols=233 Identities=28% Similarity=0.457 Sum_probs=191.6
Q ss_pred hhhcccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
++....++|...+.||+|+||.||+|...+ ..||||.+.... .....|.+|+.+|++++||||+++++++. +..++|
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v 85 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 85 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEE
Confidence 445556789999999999999999999875 689999997643 35678999999999999999999999984 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++.... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999999985321 1258999999999999999999999 899999999999999999999999998532
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCCh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~ 730 (855)
.+.++.++|||||||++|+|++ |++||........ .+..+ .....+.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 233 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--------YRMVRPD 233 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT--------CCCCCCT
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc--------cCCCCcc
Confidence 1234668999999999999999 9999976543322 11111 1112233
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
..+..+.+|+.+||..||.+||++ +++++.|+.+...
T Consensus 234 ~~~~~l~~li~~~l~~~p~~Rps~-~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 234 NCPEELYQLMRLCWKERPEDRPTF-DYLRSVLEDFFTA 270 (279)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhccChhhCCCH-HHHHHHHHHHHHh
Confidence 455789999999999999999999 8999999988654
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=344.24 Aligned_cols=233 Identities=31% Similarity=0.469 Sum_probs=193.3
Q ss_pred hhhhhcccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceE
Q 003033 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWT 597 (855)
Q Consensus 520 ~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~ 597 (855)
...+....++|...++||+|+||.||+|.+.+ ..||||+++... ...+.|.+|+.+|++++||||++++++|. +..+
T Consensus 176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 254 (452)
T 1fmk_A 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 254 (452)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceE
Confidence 34445566789999999999999999999985 679999998654 34678999999999999999999999985 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
|||||+++|+|.++|... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 255 iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp EEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred EEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceec
Confidence 999999999999999532 22458999999999999999999999 899999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
.+.++.++|||||||+||||+| |++||....... ..+..+ .....
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~--------~~~~~ 402 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--------YRMPC 402 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT--------CCCCC
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--------CCCCC
Confidence 2456789999999999999999 999997654322 222222 11223
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
|...+..+.+|+.+||..||.+||++ +++++.|+.+.
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~-~~l~~~L~~~~ 439 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLEDYF 439 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHh
Confidence 44556789999999999999999999 88999999763
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=321.53 Aligned_cols=235 Identities=23% Similarity=0.296 Sum_probs=187.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceecC----ceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.+|++++||||+++++++.+ ..+||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 356889999999999999999987 6889999997543 2345678899999999999999999998832 56899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee----CCCCcEEEeeccccc
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFEFLA 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~~KL~DFg~~~ 675 (855)
|||+++|+|.+++........+++..+..|+.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 9999999999999765444559999999999999999999999 899999999999999 888899999997431
Q ss_pred --------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch------HHHHHHhhccc
Q 003033 676 --------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK------EVQYALDTGKL 717 (855)
Q Consensus 676 --------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~------~~~~~~~~~~~ 717 (855)
...++.++|||||||++|+|+||++||.... .....+..+..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 2557789999999999999999999995221 11111111111
Q ss_pred ccc----------------cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 718 KNL----------------LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 718 ~~~----------------~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
... .-+.....+...+..+.+|+.+||+.||.+||++ +++++-....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~-~ell~h~~d~ 307 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF-DQFFAETSDI 307 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCH-HHHHHHHHHH
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccH-HHhhhccHHH
Confidence 000 0011123445677889999999999999999999 7777666543
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=335.03 Aligned_cols=229 Identities=23% Similarity=0.383 Sum_probs=186.3
Q ss_pred cCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
.++|...+.||+|+||.||+|.+. +..||||+++.... .....|.+|+.+|.+++|||||+++++|. ...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467999999999999999999864 35799999975422 22446889999999999999999999984 367
Q ss_pred EEEEEecCCCCHHHHhcccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC---cEEEe
Q 003033 597 TLVYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLS 669 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~~KL~ 669 (855)
+|||||+++|+|.+++.... ....+++..++.|+.||+.||.|||+ ++|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEEC
Confidence 89999999999999996532 22458999999999999999999999 8999999999999999554 59999
Q ss_pred ecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHH--Hhhccccc
Q 003033 670 DFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGKLKN 719 (855)
Q Consensus 670 DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~--~~~~~~~~ 719 (855)
|||+. ....++.++|||||||++|||+| |.+||......... +..+.
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~--- 303 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG--- 303 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC---
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---
Confidence 99743 13457889999999999999998 99999765543321 11111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
....+...+..+.+|+.+||+.||.+||++ .+|++.|+.+..
T Consensus 304 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~eil~~l~~~~~ 345 (367)
T 3l9p_A 304 -----RMDPPKNCPGPVYRIMTQCWQHQPEDRPNF-AIILERIEYCTQ 345 (367)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred -----CCCCCccCCHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHhh
Confidence 112334455789999999999999999999 899999998754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=349.26 Aligned_cols=231 Identities=27% Similarity=0.479 Sum_probs=191.6
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
..++....+|...++||+|+||.||+|.+. +..||||+++... .....|.+|+.+|++++|||||+++|+|. +..
T Consensus 213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 291 (495)
T 1opk_A 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291 (495)
T ss_dssp SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence 334445667899999999999999999987 6889999997653 35678999999999999999999999994 468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
+||||||++|+|.++|... ....+++..++.|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 292 ~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 367 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL 367 (495)
T ss_dssp EEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred EEEEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeeccccee
Confidence 9999999999999999643 23468999999999999999999999 899999999999999999999999998532
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 727 (855)
.+.++.++|||||||+||||+| |.+||..... +...+..+ ....
T Consensus 368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~--------~~~~ 439 (495)
T 1opk_A 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD--------YRME 439 (495)
T ss_dssp CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT--------CCCC
T ss_pred ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--------CCCC
Confidence 1235678999999999999999 9999975432 22222221 1123
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.|...+..+.+|+.+||+.||.+||++ .+|++.|+.+
T Consensus 440 ~~~~~~~~l~~li~~cl~~dP~~RPs~-~el~~~L~~~ 476 (495)
T 1opk_A 440 RPEGCPEKVYELMRACWQWNPSDRPSF-AEIHQAFETM 476 (495)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHcCcChhHCcCH-HHHHHHHHHH
Confidence 344556889999999999999999999 8899999865
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=330.26 Aligned_cols=226 Identities=25% Similarity=0.426 Sum_probs=184.6
Q ss_pred cCCccccceeeccCceEEEEEEECC------eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec-CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~L 598 (855)
.++|...+.||+|+||.||+|.+.. ..||+|.+.... ......+.+|+.++.+++||||++++++|. +..++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL 91 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence 3578889999999999999998753 248899886543 234567889999999999999999999995 46889
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 99999999999999533 3468889999999999999999999 799999999999999999999999998542
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 728 (855)
.+.++.++|||||||++|+|+| |++||..... ....+..+. ....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 238 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE--------RLAQ 238 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC--------BCCC
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC--------CCCC
Confidence 1346778999999999999999 9999975432 222222221 1122
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
|...+..+.+|+.+||..||.+||++ .++++.|+.+.
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~-~el~~~l~~~~ 275 (325)
T 3kex_A 239 PQICTIDVYMVMVKCWMIDENIRPTF-KELANEFTRMA 275 (325)
T ss_dssp CTTBCTTTTHHHHHHTCSCTTTSCCH-HHHHHHHHHHT
T ss_pred CCcCcHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHH
Confidence 33344568899999999999999999 89999998873
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-36 Score=319.84 Aligned_cols=227 Identities=25% Similarity=0.386 Sum_probs=183.5
Q ss_pred cCCccccceeeccCceEEEEEEECC---------eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
.++|...+.||+|+||.||+|.... ..||+|++..........|.+|+.+|++++||||++++++|. +.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578889999999999999998753 469999997665555678999999999999999999999984 46
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc--------EE
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--------SK 667 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--------~K 667 (855)
.++||||+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++. +|
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceee
Confidence 88999999999999999643 2348999999999999999999999 89999999999999988877 99
Q ss_pred Eeeccccc---------------------c-CCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHHHHHhhcccccccCCC
Q 003033 668 LSDFEFLA---------------------S-GELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPL 724 (855)
Q Consensus 668 L~DFg~~~---------------------~-~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~~~~~~~~~~~~~d~~ 724 (855)
|+|||+.. . ..++.++|||||||++|+|+|| .+||..............
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~-------- 233 (289)
T 4fvq_A 162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED-------- 233 (289)
T ss_dssp ECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT--------
T ss_pred eccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc--------
Confidence 99998531 1 4578899999999999999995 566654443322111110
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 725 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 725 ~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
....|...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll~~l~~l~~ 275 (289)
T 4fvq_A 234 RHQLPAPKAAELANLINNCMDYEPDHRPSF-RAIIRDLNSLFT 275 (289)
T ss_dssp TCCCCCCSSCTTHHHHHHHSCSSGGGSCCH-HHHHHHHHTCC-
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHhcC
Confidence 011222234568999999999999999999 899999998744
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=324.56 Aligned_cols=228 Identities=16% Similarity=0.117 Sum_probs=182.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||||++....... ...|.+|+.++.+++||||+++++++ .+..||||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999987 6899999998764433 25789999999999999999999998 44689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccccCCCC
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELT 680 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t 680 (855)
||+++|+|.+++.. . ........|+.||+.||.|||+ ++|+||||||+|||++.++.+||+++++.. .++
T Consensus 111 e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~~--~~~ 180 (286)
T 3uqc_A 111 EWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATMP--DAN 180 (286)
T ss_dssp ECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCCT--TCC
T ss_pred EecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEeccccC--CCC
Confidence 99999999999942 1 2445678899999999999999 899999999999999999999999888764 689
Q ss_pred cchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 681 PKSDVYSFGIILLRLLTGRPALGITKEVQYALD-TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 681 ~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.++|||||||++|+|+||++||........... .........+ ...++...+..+.+|+.+||+.||.+| ++ .+++
T Consensus 181 ~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R-s~-~el~ 257 (286)
T 3uqc_A 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE-PADIDRDIPFQISAVAARSVQGDGGIR-SA-STLL 257 (286)
T ss_dssp HHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCC-HHHHCTTSCHHHHHHHHHHHCTTSSCC-CH-HHHH
T ss_pred chhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCC-hhhcccCCCHHHHHHHHHHcccCCccC-CH-HHHH
Confidence 999999999999999999999975432110000 0000000000 001112345789999999999999999 88 8999
Q ss_pred HHHhhhHhc
Q 003033 760 RVLEPMRAS 768 (855)
Q Consensus 760 ~~L~~~~~~ 768 (855)
+.|+.+...
T Consensus 258 ~~L~~~~~~ 266 (286)
T 3uqc_A 258 NLMQQATAV 266 (286)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhcc
Confidence 999988553
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=323.85 Aligned_cols=231 Identities=28% Similarity=0.417 Sum_probs=187.7
Q ss_pred hcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-- 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-- 593 (855)
.....+|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+|++++||||++++++|.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 344568999999999999999999863 26799999975432 12356889999999999999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDN---------------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrD 652 (855)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+ ++|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccc
Confidence 468999999999999999965332 1348999999999999999999999 7999999
Q ss_pred cccCceeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 003033 653 LKPANILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGI 704 (855)
Q Consensus 653 LKp~NILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~ 704 (855)
|||+|||++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999998532 1225678999999999999999 9999975
Q ss_pred chHH--HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 705 TKEV--QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 705 ~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
.... ...+..+. ....+...+..+.+|+.+||+.||.+||++ .++++.|+.+.
T Consensus 256 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~~l~~~l~~~~ 310 (314)
T 2ivs_A 256 IPPERLFNLLKTGH--------RMERPDNCSEEMYRLMLQCWKQEPDKRPVF-ADISKDLEKMM 310 (314)
T ss_dssp CCGGGHHHHHHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CCHHHHHHHhhcCC--------cCCCCccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHH
Confidence 4332 22222211 122344556789999999999999999999 88999998874
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=331.00 Aligned_cols=223 Identities=22% Similarity=0.320 Sum_probs=180.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
.+.|...+.||+|+||.||+|... +..||||+++..... ....+.+|+.+|.+++||||++++++|. +..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457999999999999999999986 688999999865432 2467899999999999999999999984 468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC----cEEEeecc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFE 672 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~~KL~DFg 672 (855)
+|||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 899999999999999943 3469999999999999999999999 8999999999999998776 79999998
Q ss_pred cc------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 673 FL------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 673 ~~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
+. ....++.++|||||||++|+|++|.+||................ .+ ....+
T Consensus 165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~-~~~~~ 241 (361)
T 2yab_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVS--YD-FDEEF 241 (361)
T ss_dssp SCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC--CC-CCHHH
T ss_pred CceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--CC-CCchh
Confidence 43 12457889999999999999999999997665433221111100 00 00011
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+...+..+.+|+.+||..||.+||++ .+++
T Consensus 242 ~~~~s~~~~~li~~~L~~dP~~R~t~-~e~l 271 (361)
T 2yab_A 242 FSQTSELAKDFIRKLLVKETRKRLTI-QEAL 271 (361)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred ccCCCHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 12345679999999999999999999 5554
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=327.63 Aligned_cols=237 Identities=25% Similarity=0.399 Sum_probs=193.4
Q ss_pred ccchhhhhcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeE
Q 003033 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL 588 (855)
Q Consensus 517 ~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l 588 (855)
.+...++....++|...+.||+|+||.||+|.+. +..||||.+...... ....|.+|+.+|++++||||+++
T Consensus 14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 3556677778889999999999999999999765 467999999754321 23468899999999999999999
Q ss_pred eceec--CceEEEEEecCCCCHHHHhcccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCcee
Q 003033 589 VGACP--EVWTLVYEYLPNGSLEDRLSCKD-------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659 (855)
Q Consensus 589 ~g~~~--~~~~LV~Ey~~~GsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NIL 659 (855)
++++. +..++||||+++|+|.+++.... ...++++..+..++.||+.||.|||+ ++|+||||||+|||
T Consensus 94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIl 170 (322)
T 1p4o_A 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 170 (322)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEE
T ss_pred EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEE
Confidence 99984 46889999999999999985421 12467999999999999999999999 79999999999999
Q ss_pred eCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH-
Q 003033 660 LDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY- 710 (855)
Q Consensus 660 ld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~- 710 (855)
++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||........
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 250 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 250 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH
T ss_pred EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH
Confidence 9999999999997431 2457889999999999999999 8999976543322
Q ss_pred -HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 711 -ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 711 -~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+..+.. ...+...+..+.+|+.+||..||.+||++ .++++.|+.+
T Consensus 251 ~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~e~l~~L~~~ 297 (322)
T 1p4o_A 251 RFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIKEE 297 (322)
T ss_dssp HHHHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHGGG
T ss_pred HHHHcCCc--------CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHh
Confidence 1112111 12334455789999999999999999999 8899998876
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=312.42 Aligned_cols=229 Identities=24% Similarity=0.435 Sum_probs=189.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
..++|...+.||+|+||.||+|... +..||||++..... ....+.+|+.++.+++||||+++++++. +..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3457888999999999999999985 57899999986543 4578999999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 9999999999543 3468999999999999999999999 899999999999999999999999997432
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++||||||+++|+|++ |++||.............. ......|...+..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~------~~~~~~~~~~~~~ 233 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYKPRLASTH 233 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT------TCCCCCCTTSCHH
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc------CCcCCCCccCcHH
Confidence 1456778999999999999999 8999976544322111110 1111223344578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 234 l~~li~~~l~~~p~~Rps~-~~ll~~L~~l~~ 264 (267)
T 3t9t_A 234 VYQIMNHCWRERPEDRPAF-SRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCH-HHHHHHHHHHHh
Confidence 9999999999999999999 899999998854
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=324.07 Aligned_cols=220 Identities=23% Similarity=0.354 Sum_probs=175.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC----------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE---------- 594 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~---------- 594 (855)
++|+..+.||+|+||.||+|... +..||||++...... ....|.+|+.+|++++|||||+++++|.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 46888999999999999999986 688999999765432 35679999999999999999999998721
Q ss_pred -------------------------------------------------ceEEEEEecCCCCHHHHhcccCCCCCCCHHH
Q 003033 595 -------------------------------------------------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQT 625 (855)
Q Consensus 595 -------------------------------------------------~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~ 625 (855)
..++|||||++|+|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 2689999999999999997665556678888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------------------------------
Q 003033 626 RIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------------------------------ 675 (855)
Q Consensus 626 ~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------------------------------ 675 (855)
+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 99999999999999999 899999999999999999999999998532
Q ss_pred -------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCC
Q 003033 676 -------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 748 (855)
Q Consensus 676 -------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP 748 (855)
...++.++|||||||++|+|++|.+|+..............+ ...+......+.+|+.+||+.||
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p 314 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF--------PLLFTQKYPQEHMMVQDMLSPSP 314 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCC--------CHHHHHHCHHHHHHHHHHHCSSG
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCC--------CcccccCChhHHHHHHHHccCCC
Confidence 134678999999999999999998876322211111111111 01112334678999999999999
Q ss_pred CCCCChHHHHH
Q 003033 749 KSRPELGKDVW 759 (855)
Q Consensus 749 ~~RPs~~~evl 759 (855)
.+||++ .+++
T Consensus 315 ~~Rps~-~~~l 324 (332)
T 3qd2_B 315 TERPEA-TDII 324 (332)
T ss_dssp GGSCCH-HHHH
T ss_pred CcCCCH-HHHh
Confidence 999999 6664
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=322.52 Aligned_cols=231 Identities=23% Similarity=0.377 Sum_probs=185.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceecC------c
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE------V 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------~ 595 (855)
.++|...+.||+|+||.||+|... +..||||++....... ...|.+|+.++.+++||||+++++++.. .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 467999999999999999999975 6889999998754433 2468899999999999999999998742 2
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.+|||||+++|+|.+++... .++++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 38999999999999999543 368999999999999999999999 799999999999999999999999998532
Q ss_pred ----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 003033 676 ----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 ----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~ 727 (855)
...++.++|||||||++|+|+||++||............... ....+ ..
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-~~~~~--~~ 241 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPP--SA 241 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC-CCCCH--HH
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-CCCCc--cc
Confidence 234678999999999999999999999876554332221110 00000 00
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
.+...+..+.+|+.+||+.||.+||+..+++...|..+.
T Consensus 242 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 111245779999999999999999999787777776653
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=320.10 Aligned_cols=232 Identities=25% Similarity=0.396 Sum_probs=188.4
Q ss_pred hcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec-
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP- 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~- 593 (855)
....++|...+.||+|+||.||+|.+. +..||||++...... ....|.+|+.+|.++ +||||++++++|.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 344568999999999999999999862 368999999865321 246789999999999 9999999999984
Q ss_pred -CceEEEEEecCCCCHHHHhcccCC---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCc
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDN---------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 657 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~---------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~N 657 (855)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+ ++|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccce
Confidence 468999999999999999964432 2258999999999999999999999 799999999999
Q ss_pred eeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--
Q 003033 658 ILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE-- 707 (855)
Q Consensus 658 ILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~-- 707 (855)
||++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||.....
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 999999999999997432 2346778999999999999999 9999975432
Q ss_pred -HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 708 -VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 708 -~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
....+..+ . . ...+...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 256 ~~~~~~~~~-~----~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~ell~~L~~~~~ 307 (313)
T 1t46_A 256 KFYKMIKEG-F----R---MLSPEHAPAEMYDIMKTCWDADPLKRPTF-KQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHHHT-C----C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHhccC-C----C---CCCcccCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHHHHHH
Confidence 22222221 1 1 11233445789999999999999999999 899999998754
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=319.08 Aligned_cols=228 Identities=26% Similarity=0.447 Sum_probs=187.6
Q ss_pred cccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec---CceEEEEE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYE 601 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV~E 601 (855)
...++|...+.||+|+||.||+|...+..||||+++... ..+.|.+|+.++.+++||||+++++++. +..++|||
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred CChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 345679999999999999999999999999999997543 4578999999999999999999999873 35789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 96 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 96 YMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred cCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 999999999995432 2237899999999999999999999 799999999999999999999999998432
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|+| |++||....... ..+..+ .....+...+..+
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l 243 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--------YKMDAPDGCPPAV 243 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT--------CCCCCCTTCCHHH
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--------CCCCCcccCCHHH
Confidence 2456789999999999999998 999997543221 111111 1122334456789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+|+.+||..||.+||++ .++++.|+.++.
T Consensus 244 ~~li~~~l~~~p~~Rps~-~~l~~~L~~i~~ 273 (278)
T 1byg_A 244 YEVMKNCWHLDAAMRPSF-LQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHhcCChhhCCCH-HHHHHHHHHHHh
Confidence 999999999999999999 899999998854
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=321.18 Aligned_cols=229 Identities=21% Similarity=0.269 Sum_probs=182.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..+|...+.||+|+||.||+|... +..||||++.... ....+.+|+.++.++ +||||+++++++. +..+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 467999999999999999999964 6899999987543 345789999999999 9999999999873 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc-----EEEeeccccc-
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-----SKLSDFEFLA- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-----~KL~DFg~~~- 675 (855)
|+ +|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++. +||+|||+..
T Consensus 86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 99 99999999643 3469999999999999999999999 79999999999999999887 9999998542
Q ss_pred -------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH--HHH---HHhhccccc
Q 003033 676 -------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQY---ALDTGKLKN 719 (855)
Q Consensus 676 -------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~--~~~---~~~~~~~~~ 719 (855)
+..++.++|||||||++|||++|++||..... ... .+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 12357789999999999999999999975321 111 111111110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
....... ..+ .+.+|+.+||..||.+||++ ++|.+.|+.+....
T Consensus 240 ~~~~~~~----~~p-~~~~li~~~l~~~p~~RP~~-~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 240 PIEVLCE----NFP-EMATYLRYVRRLDFFEKPDY-DYLRKLFTDLFDRK 283 (330)
T ss_dssp CHHHHTT----TCH-HHHHHHHHHHHCCTTCCCCH-HHHHHHHHHHHHHT
T ss_pred CHHHHhc----cCh-HHHHHHHHHHhCCCCCCCCH-HHHHHHHHHHHHHc
Confidence 0000111 123 79999999999999999999 89999999885543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=339.89 Aligned_cols=232 Identities=22% Similarity=0.236 Sum_probs=184.0
Q ss_pred hhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec-
Q 003033 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP- 593 (855)
Q Consensus 520 ~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~- 593 (855)
+.++...+++|+..++||+|+||.||+|... +..||||+++.. .......+.+|+.+|..++|||||+++++|.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3455566778999999999999999999987 478999999752 1223445899999999999999999999984
Q ss_pred -CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
+..+||||||++|+|.++|... ...+++..+..++.||+.||.|||+ ++||||||||+||||+.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchh
Confidence 4689999999999999999532 3469999999999999999999999 899999999999999999999999998
Q ss_pred ccc-------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 003033 673 FLA-------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 673 ~~~-------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
+.. .+.++.++|||||||++|||+||++||...+........-.....+
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 300 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 300 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc
Confidence 431 2346789999999999999999999998765443222111100000
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKS--RPELGKDVW 759 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~--RPs~~~evl 759 (855)
..+.++...+..+.+|+.+||..+|++ ||++ ++++
T Consensus 301 --~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~-~eil 337 (437)
T 4aw2_A 301 --QFPTQVTDVSENAKDLIRRLICSREHRLGQNGI-EDFK 337 (437)
T ss_dssp --CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTT-HHHH
T ss_pred --cCCcccccCCHHHHHHHHHHhcccccccCCCCH-HHHh
Confidence 001111235678999999999888888 9998 6664
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=318.27 Aligned_cols=232 Identities=27% Similarity=0.468 Sum_probs=191.9
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
++.....+|...+.||+|+||.||+|.+. +..||||++.... .....|.+|+.++++++||||+++++++. +..+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 44456678999999999999999999987 6789999997543 34567999999999999999999999984 4678
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+++|+|.+++... ....+++..+..++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999999643 33569999999999999999999999 799999999999999999999999997432
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++ |.+||...... ...+... .....
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~--------~~~~~ 233 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD--------YRMER 233 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT--------CCCCC
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc--------CCCCC
Confidence 2456789999999999999999 99999754322 1122111 11223
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~-~~~~~~l~~~~~ 271 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSF-AEIHQAFETMFQ 271 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCH-HHHHHHHHHHHH
Confidence 34455789999999999999999999 889999988743
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=315.06 Aligned_cols=225 Identities=25% Similarity=0.349 Sum_probs=177.6
Q ss_pred CCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+|++++||||+++++++. +..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888999999999999999886 68899999975432 23467889999999999999999999984 468999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
+++ +|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp CSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred cCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 974 899988532 3468999999999999999999999 89999999999999999999999999732
Q ss_pred ------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----ccc-----cc-----ccC
Q 003033 675 ------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GKL-----KN-----LLD 722 (855)
Q Consensus 675 ------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~~-----~~-----~~d 722 (855)
....++.++|||||||++|+|+||++||............ +.. .. ..+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 1234788999999999999999999999766543322211 000 00 000
Q ss_pred CCC-----C---CCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 PLA-----G---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ~~~-----~---~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.. . .+....+..+.+|+.+||..||.+||++ .+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 279 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA-KQAL 279 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCH-HHHh
Confidence 000 0 0112345788999999999999999999 5554
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=324.91 Aligned_cols=222 Identities=19% Similarity=0.312 Sum_probs=179.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
.++|...+.||+|+||.||+|... +..||+|.+.... .....+.+|+.+|..++||||+++++++. +..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999999999986 5789999997532 23456889999999999999999999984 568899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC--CCcEEEeeccccc-----
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA--NFVSKLSDFEFLA----- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~~KL~DFg~~~----- 675 (855)
+++|+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+..
T Consensus 83 ~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 999999999953 23469999999999999999999999 89999999999999987 7999999998532
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhhHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|++|.+||......... +..+.. ......| ...+.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~-~~~s~ 232 (321)
T 1tki_A 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY----TFDEEAF-KEISI 232 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC----CCCHHHH-TTSCH
T ss_pred CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCC----CCChhhh-ccCCH
Confidence 223578999999999999999999999765543321 111111 0000001 12357
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+.+|+.+||..||.+||++ .++++
T Consensus 233 ~~~~li~~~L~~dp~~Rpt~-~e~l~ 257 (321)
T 1tki_A 233 EAMDFVDRLLVKERKSRMTA-SEALQ 257 (321)
T ss_dssp HHHHHHHTTSCSSGGGSCCH-HHHHH
T ss_pred HHHHHHHHHcCCChhHCcCH-HHHhc
Confidence 89999999999999999999 66654
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=327.83 Aligned_cols=217 Identities=22% Similarity=0.297 Sum_probs=180.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|+..+.||+|+||.||++... +..||||+++.. .......+.+|+.+|..++||||+++++++. +..+||
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357899999999999999999886 688999999753 2334567889999999999999999999984 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.+|.+||+|||+..
T Consensus 84 ~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 9999999999998543 458999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhh
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
...++.++|||||||++|||++|++||...+.... .+..+ ...+|...
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~---------~~~~p~~~ 228 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EIRFPRTL 228 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---------CCCCCTTS
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC---------CCCCCCCC
Confidence 34568899999999999999999999976544322 11111 11345556
Q ss_pred HHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRP-----ELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RP-----s~~~evl 759 (855)
+..+.+|+.+||..||.+|| ++ ++++
T Consensus 229 s~~~~~li~~lL~~dP~~R~g~~~~~~-~ei~ 259 (337)
T 1o6l_A 229 SPEAKSLLAGLLKKDPKQRLGGGPSDA-KEVM 259 (337)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCSTTTH-HHHH
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCH-HHHH
Confidence 68899999999999999999 55 5553
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=322.39 Aligned_cols=222 Identities=23% Similarity=0.327 Sum_probs=178.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
+.|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|.+++||||++++++|. +..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46888999999999999999986 688999999765332 2467999999999999999999999984 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC----cEEEeeccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFEF 673 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~~KL~DFg~ 673 (855)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||+
T Consensus 91 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999943 3569999999999999999999999 8999999999999998887 899999985
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.. ...++.++|||||||++|+|++|.+||................. .....++
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~ 241 (326)
T 2y0a_A 165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY---EFEDEYF 241 (326)
T ss_dssp CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC---CCCHHHH
T ss_pred CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC---CcCcccc
Confidence 32 24577899999999999999999999976554332211111000 0000011
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||..||.+||++ .+++
T Consensus 242 ~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 270 (326)
T 2y0a_A 242 SNTSALAKDFIRRLLVKDPKKRMTI-QDSL 270 (326)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCCCH-HHHh
Confidence 1234678999999999999999999 6664
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=316.18 Aligned_cols=228 Identities=25% Similarity=0.426 Sum_probs=184.1
Q ss_pred cCCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEecee---cCceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~---~~~~~ 597 (855)
...|...+.||+|+||.||+|.+.. ..||+|.+...... ....|.+|+.++++++||||++++++| .+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3468888999999999999998652 35899998764322 245688999999999999999999986 23578
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+++|+|.+++.. ....+++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 104 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccc
Confidence 99999999999999953 34568999999999999999999999 899999999999999999999999998542
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLA 725 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~ 725 (855)
...++.++|||||||++|+|++ |.+||........ ....+. .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~ 250 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------R 250 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC--------C
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC--------C
Confidence 2346788999999999999999 6777765433221 111111 1
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
...|...+..+.+|+.+||+.||.+||++ .++++.|+.+...
T Consensus 251 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~-~ell~~L~~~~~~ 292 (298)
T 3f66_A 251 LLQPEYCPDPLYEVMLKCWHPKAEMRPSF-SELVSRISAIFST 292 (298)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHHh
Confidence 12233345789999999999999999999 8999999988653
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=325.96 Aligned_cols=222 Identities=23% Similarity=0.330 Sum_probs=173.6
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
....+.|...+.||+|+||.||+|... +..||||++.... ..+.+.+|+.+|.+++||||++++++|. +..+||
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 345567999999999999999999987 4789999998643 3467889999999999999999999984 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeecccc--
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEFL-- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~~-- 674 (855)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+.
T Consensus 127 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999999853 3468999999999999999999999 79999999999999975 899999999742
Q ss_pred ----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH---hhcccccccCCCCCCCC
Q 003033 675 ----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL---DTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 675 ----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~---~~~~~~~~~d~~~~~~p 729 (855)
.+..++.++|||||||++|+|++|..||.........+ ..... .....+.
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-----~~~~~~~ 275 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-----YFISPWW 275 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-----CCCTTTT
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-----ccCCchh
Confidence 23457889999999999999999999996544322111 11111 1112233
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||..||.+||++ .+++
T Consensus 276 ~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 304 (349)
T 2w4o_A 276 DEVSLNAKDLVRKLIVLDPKKRLTT-FQAL 304 (349)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred hhCCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 3456789999999999999999999 5554
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=323.13 Aligned_cols=227 Identities=28% Similarity=0.477 Sum_probs=185.6
Q ss_pred cCCccccceeeccCceEEEEEEECC------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
..+|...+.||+|+||.||+|.+.. ..||||.+...... ....|.+|+.++.+++||||+++++++. +..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4567888999999999999998753 35999999764322 2346889999999999999999999984 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
|||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 123 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999999643 3468999999999999999999999 799999999999999999999999997431
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCC
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAG 726 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~ 726 (855)
...++.++|||||||++|+|+| |++||........ .+..+ ...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~--------~~~ 269 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG--------FRL 269 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--------CCC
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC--------CcC
Confidence 2456778999999999999999 9999975543221 11111 111
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..+...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 270 ~~~~~~~~~l~~li~~~l~~~p~~Rps~-~~l~~~L~~~~~ 309 (333)
T 1mqb_A 270 PTPMDCPSAIYQLMMQCWQQERARRPKF-ADIVSILDKLIR 309 (333)
T ss_dssp CCCTTCBHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHh
Confidence 2233456789999999999999999999 889999998754
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=348.80 Aligned_cols=228 Identities=25% Similarity=0.409 Sum_probs=188.2
Q ss_pred cCCccccc-eeeccCceEEEEEEEC----CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 527 THNFDPSL-KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~-~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
..+|.... .||+|+||.||+|.++ +..||||+++.... .....|.+|+.+|++++|||||+++|+|. +..+||
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv 413 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 413 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEE
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEE
Confidence 34454444 7999999999999874 35699999986533 34678999999999999999999999994 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
||||++|+|.++|.. ....+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 414 ~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999953 34569999999999999999999999 799999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
.+.++.++|||||||+||||+| |++||....... ..+..+. ....
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~--------~~~~ 560 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK--------RMEC 560 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC--------CCCC
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC--------CCCC
Confidence 2456789999999999999998 999997654322 2222221 1234
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
|...+..+.+|+.+||..||.+||++ .+|++.|+.+...
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~-~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDF-LTVEQRMRACYYS 599 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCH-HHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHHHHH
Confidence 44566889999999999999999999 8899999987543
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=323.92 Aligned_cols=221 Identities=25% Similarity=0.347 Sum_probs=174.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+++.++||||+++++++. +..+||||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357999999999999999999886 68899999975433 23467899999999999999999999984 45789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 86 ~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 86 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999984 33469999999999999999999999 899999999999999999999999998542
Q ss_pred ---------------------cCC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-cccccccCCCCCCCChhh
Q 003033 676 ---------------------SGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-GKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ---------------------~~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-~~~~~~~d~~~~~~p~~~ 732 (855)
... ++.++|||||||++|+|+||++||............ ...... ... ....
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----~~~-~~~~ 234 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----LNP-WKKI 234 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT----STT-GGGS
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc----CCc-cccC
Confidence 112 256799999999999999999999654321111110 000000 011 1234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+.+|+.+||..||.+||++ .+++
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~-~eil 260 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITI-PDIK 260 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCH-HHHT
T ss_pred CHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 5778999999999999999999 5553
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=347.59 Aligned_cols=232 Identities=31% Similarity=0.472 Sum_probs=192.9
Q ss_pred hhhhhcccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceE
Q 003033 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWT 597 (855)
Q Consensus 520 ~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~ 597 (855)
...++...++|...++||+|+||.||+|.+.+ ..||||+++... ...+.|.+|+.+|++++|||||+++++|. +..+
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 337 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 337 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccce
Confidence 44455566789999999999999999999985 679999998654 34678999999999999999999999985 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
||||||++|+|.++|... ....+++..++.|+.||+.||.|||+ ++||||||||+|||++.++.+||+|||+..
T Consensus 338 lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred EeeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 999999999999999532 12358999999999999999999999 899999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
.+.++.++|||||||+||||+| |+.||....... ..+..+. ....
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~--------~~~~ 485 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--------RMPC 485 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC--------CCCC
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCC
Confidence 2456789999999999999999 999997654322 2222221 1123
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
|...+..+.+|+.+||..||.+||++ ++|++.|+.+
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~-~~l~~~L~~~ 521 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLEDY 521 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHTS
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHH
Confidence 34556789999999999999999999 8899999876
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-36 Score=326.96 Aligned_cols=235 Identities=25% Similarity=0.355 Sum_probs=186.2
Q ss_pred CCccccceeeccCceEEEEEEE------CCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec----CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~ 597 (855)
++|...+.||+|+||.||+|.+ .+..||||++..........|.+|+.+|.+++||||+++++++. ...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788899999999999999985 25789999998765444567999999999999999999999873 3478
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
|||||+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 999999999999999542 2358999999999999999999999 899999999999999999999999998542
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh--------cc-cccc
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--------GK-LKNL 720 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~--------~~-~~~~ 720 (855)
...++.++|||||||++|+|++|.+||............ .. ...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 122466899999999999999999998644322110000 00 0011
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
........+...+..+.+|+.+||+.||.+||++ .++++.|+.+...
T Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~ell~~L~~~~~~ 304 (327)
T 3lxl_A 258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSF-SALGPQLDMLWSG 304 (327)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHC---
T ss_pred hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHhh
Confidence 1112223445566889999999999999999999 8999999988543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=318.81 Aligned_cols=226 Identities=27% Similarity=0.404 Sum_probs=174.7
Q ss_pred cccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
...++|...++||+|+||.||+|... +..||||++....... ...+.+|+.+|++++||||+++++++. +..+||
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 34568999999999999999999985 6889999997653322 357889999999999999999999984 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||++ |+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 98 ~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFME-KDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCS-EEHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCC-CCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99997 588888753 33468999999999999999999999 899999999999999999999999997431
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC----
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP---- 729 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p---- 729 (855)
...++.++|||||||++|+|++|++||............... ...+....|+
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI--LGTPNPREWPQVQE 249 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHH--HCCCCTTTSGGGTT
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH--HCCCChHHhhhhhc
Confidence 134688999999999999999999999754322111110000 0000000111
Q ss_pred ---------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 ---------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ---------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.++.+|+.+||+.||.+|||+ .+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 299 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA-RDAM 299 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH-HHHH
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH-HHHh
Confidence 1234678999999999999999999 6654
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=316.97 Aligned_cols=228 Identities=24% Similarity=0.400 Sum_probs=184.7
Q ss_pred cccCCccccc-eeeccCceEEEEEEEC----CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec-Cce
Q 003033 525 GATHNFDPSL-KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP-EVW 596 (855)
Q Consensus 525 ~~~~~f~~~~-~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~ 596 (855)
....+|.... .||+|+||.||+|.+. +..||||+++...... ...|.+|+.++..++||||+++++++. +..
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 92 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW 92 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSE
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCc
Confidence 3445677777 8999999999999653 3679999998654322 467899999999999999999999984 467
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 8999999999999999542 458999999999999999999999 799999999999999999999999998532
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCC
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLA 725 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~ 725 (855)
...++.++|||||||++|+|+| |++||........ .+..+. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE--------R 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--------C
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------C
Confidence 1124568999999999999999 9999976544322 222211 1
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
...|...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 239 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~L~~~~~ 279 (291)
T 1xbb_A 239 MGCPAGCPREMYDLMNLCWTYDVENRPGF-AAVELRLRNYYY 279 (291)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHH
Confidence 22344556789999999999999999999 899999998844
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=322.53 Aligned_cols=227 Identities=23% Similarity=0.406 Sum_probs=186.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--C----eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec-CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~L 598 (855)
..+|...++||+|+||.||+|.+. + .+||+|.+.... ......|.+|+.+|.+++||||++++++|. +..++
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 93 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 93 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence 457999999999999999999875 2 246888886543 334678999999999999999999999984 46789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
|+||+++|+|.+++... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 94 v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999999643 3468999999999999999999999 799999999999999999999999998531
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++ |.+||...... ...+..+. ....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 240 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--------RLPQ 240 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--------CCCC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC--------CCCC
Confidence 2346789999999999999999 99999754432 22222211 1123
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 241 ~~~~~~~l~~li~~~l~~dp~~Rps~-~ell~~L~~~~~ 278 (327)
T 3lzb_A 241 PPICTIDVYMIMRKCWMIDADSRPKF-RELIIEFSKMAR 278 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHT
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHHHh
Confidence 34456789999999999999999999 899999998743
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=317.82 Aligned_cols=228 Identities=25% Similarity=0.405 Sum_probs=186.2
Q ss_pred ccCCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceecC-ceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~L 598 (855)
..++|...+.||+|+||.||+|.+.+ ..||||.+..... .....|.+|+.++++++||||+++++++.+ ..++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWI 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEE
Confidence 45678899999999999999998653 3599999986532 234678999999999999999999999854 5789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 90 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 99999999999999543 3458999999999999999999999 899999999999999999999999998432
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|+|+| |++||..... ....+..+.. ...|
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 236 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR--------LPKP 236 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC--------CCCC
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC--------CCCC
Confidence 2456778999999999999998 9999964322 2222222211 1123
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
...+..+.+|+.+||..||.+||++ .+++..|+.+..
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rps~-~ell~~L~~~~~ 273 (281)
T 3cc6_A 237 DLCPPVLYTLMTRCWDYDPSDRPRF-TELVCSLSDVYQ 273 (281)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCCchhCcCH-HHHHHHHHHHHH
Confidence 3445789999999999999999999 899999998743
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=319.15 Aligned_cols=235 Identities=22% Similarity=0.359 Sum_probs=186.6
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP 593 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~ 593 (855)
.++....++|...+.||+|+||.||+|.+.. ..||||.++...... ...|.+|+.++.+++||||++++++|.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3444556789999999999999999997742 479999997653322 356889999999999999999999984
Q ss_pred C-------ceEEEEEecCCCCHHHHhccc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC
Q 003033 594 E-------VWTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663 (855)
Q Consensus 594 ~-------~~~LV~Ey~~~GsL~~~L~~~---~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 663 (855)
+ ..++||||+++|+|.+++... .....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCC
Confidence 3 348999999999999998432 234569999999999999999999999 799999999999999999
Q ss_pred CcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHh
Q 003033 664 FVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALD 713 (855)
Q Consensus 664 ~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~ 713 (855)
+.+||+|||+.. ...++.++|||||||++|+|++ |.+||....... ..+.
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 263 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL 263 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH
Confidence 999999998532 2346778999999999999999 899997543321 1111
Q ss_pred hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 714 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 714 ~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+ .....|...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 264 ~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~L~~l~~ 308 (313)
T 3brb_A 264 HG--------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTF-SVLRLQLEKLLE 308 (313)
T ss_dssp TT--------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred cC--------CCCCCCccccHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHH
Confidence 11 1122334455789999999999999999999 899999998754
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=319.29 Aligned_cols=238 Identities=26% Similarity=0.376 Sum_probs=191.9
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeE
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTL 588 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l 588 (855)
+...++....++|...+.||+|+||.||+|.+. +..||||++...... ....+.+|+.+|.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 445556666788999999999999999999853 368999999765322 235688999999999 79999999
Q ss_pred eceecC---ceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecc
Q 003033 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652 (855)
Q Consensus 589 ~g~~~~---~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrD 652 (855)
+++|.. ..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+ ++|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence 999843 48999999999999999964332 1238899999999999999999999 7999999
Q ss_pred cccCceeeCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 003033 653 LKPANILLDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGI 704 (855)
Q Consensus 653 LKp~NILld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~ 704 (855)
|||+|||++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999999999999999998532 2346789999999999999998 9999965
Q ss_pred ch---HHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 705 TK---EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 705 ~~---~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.. .....+..+.. ...|...+..+.+|+.+||+.||.+||++ .++++.|+.+..
T Consensus 254 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~ell~~L~~~~~ 310 (316)
T 2xir_A 254 VKIDEEFCRRLKEGTR--------MRAPDYTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNLLQ 310 (316)
T ss_dssp CCCSHHHHHHHHHTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred cchhHHHHHHhccCcc--------CCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHh
Confidence 43 22222222211 12233445789999999999999999999 899999998754
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=315.28 Aligned_cols=228 Identities=25% Similarity=0.413 Sum_probs=186.9
Q ss_pred cCCccccc-eeeccCceEEEEEEEC----CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 527 THNFDPSL-KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~-~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
.++|.... .||+|+||.||+|.+. +..||||+++.... .....|.+|+.+|.+++||||+++++++. +..++|
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv 87 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 87 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence 34566665 8999999999999864 56799999986532 23457889999999999999999999984 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 88 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 999999999999953 33569999999999999999999999 799999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|+| |++||....... ..+..+. ....
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~--------~~~~ 234 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK--------RMEC 234 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC--------CCCC
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCC--------cCCC
Confidence 1235678999999999999999 999997554322 2222211 1233
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
|...+..+.+|+.+||..||.+||++ .++++.|+.+...
T Consensus 235 ~~~~~~~l~~li~~~l~~~p~~Rps~-~~l~~~l~~~~~~ 273 (287)
T 1u59_A 235 PPECPPELYALMSDCWIYKWEDRPDF-LTVEQRMRACYYS 273 (287)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHHh
Confidence 44556789999999999999999999 8999999998554
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=331.81 Aligned_cols=220 Identities=24% Similarity=0.328 Sum_probs=179.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||++... +..||||++.... ......+.+|+.+|..++|||||+++++|. +..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357899999999999999999886 4779999986532 234567889999999999999999999984 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+||||+.+|.+||+|||+..
T Consensus 94 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 999999999999953 3469999999999999999999999 899999999999999999999999997431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH--HHHHHhhcccccccCCCCCCCCh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++|||||||++|+|++|++||..... ....... +. .....+|.
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~--~~----~~~~~~p~ 241 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT--FE----TTVVTYPS 241 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHH--HH----HCCCCCCT
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHH--Hh----hcccCCCC
Confidence 12477899999999999999999999964321 1111111 00 11123444
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
..+..+.+|+.+||+.||.+||+..+++
T Consensus 242 ~~s~~~~~li~~lL~~dP~~R~s~~~~l 269 (384)
T 4fr4_A 242 AWSQEMVSLLKKLLEPNPDQRFSQLSDV 269 (384)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCSHHHH
T ss_pred cCCHHHHHHHHHHhcCCHhHhcccHHHH
Confidence 5567899999999999999999954555
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=322.57 Aligned_cols=238 Identities=24% Similarity=0.328 Sum_probs=186.5
Q ss_pred ccchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceec
Q 003033 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP 593 (855)
Q Consensus 517 ~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~ 593 (855)
++.-..+.....+|...+.||+|+||.||+|.+. +..||||++..........+.+|+.++.++. ||||+++++++.
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~ 96 (337)
T 3ll6_A 17 DFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96 (337)
T ss_dssp SSTTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred HhhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence 4444555556678999999999999999999984 6889999987654444567899999999996 999999999872
Q ss_pred --------C--ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecccccCceeeC
Q 003033 594 --------E--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLD 661 (855)
Q Consensus 594 --------~--~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--IvHrDLKp~NILld 661 (855)
. .+++||||+. |+|.+++.......++++..+..|+.||+.||.|||+ ++ |+||||||+|||++
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~ 172 (337)
T 3ll6_A 97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLS 172 (337)
T ss_dssp ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEEC
T ss_pred ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEEC
Confidence 1 3689999995 7999988653344579999999999999999999999 66 99999999999999
Q ss_pred CCCcEEEeeccccc----------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCC
Q 003033 662 ANFVSKLSDFEFLA----------------------------------------SGELTPKSDVYSFGIILLRLLTGRPA 701 (855)
Q Consensus 662 ~~~~~KL~DFg~~~----------------------------------------~~~~t~ksDVwSfGvvl~elltG~~p 701 (855)
.++.+||+|||+.. ...++.++|||||||++|+|+||++|
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p 252 (337)
T 3ll6_A 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252 (337)
T ss_dssp TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 99999999998541 22356789999999999999999999
Q ss_pred CCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 702 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 702 f~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
|......... .+... .+ .+...+..+.+|+.+||+.||.+||++ .++++.|+.+...
T Consensus 253 ~~~~~~~~~~--~~~~~---~~----~~~~~~~~~~~li~~~l~~~p~~Rps~-~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 253 FEDGAKLRIV--NGKYS---IP----PHDTQYTVFHSLIRAMLQVNPEERLSI-AEVVHQLQEIAAA 309 (337)
T ss_dssp C--------------CC---CC----TTCCSSGGGHHHHHHHSCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred CcchhHHHhh--cCccc---CC----cccccchHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHhc
Confidence 9643332111 11110 01 111223458899999999999999999 8999999988654
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=317.39 Aligned_cols=232 Identities=25% Similarity=0.416 Sum_probs=181.9
Q ss_pred CCccccceeeccCceEEEEEEE------CCeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec----Cce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~ 596 (855)
..|...+.||+|+||.||+|.+ .+..||||++..... .....+.+|+.+|.+++||||++++++|. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999999985 357899999986532 34577999999999999999999999984 347
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccc
Confidence 8999999999999999533 2458999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh--------cc-ccc
Q 003033 676 ---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--------GK-LKN 719 (855)
Q Consensus 676 ---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~--------~~-~~~ 719 (855)
...++.++|||||||++|+|+||.+|+............ .. ...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 122455799999999999999999886432211100000 00 000
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+........|...+..+.+|+.+||+.||.+||++ .++++.|+.+
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll~~L~~l 300 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSF-QNLIEGFEAL 300 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHH
Confidence 11112223444566889999999999999999999 8999999876
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=312.92 Aligned_cols=227 Identities=26% Similarity=0.397 Sum_probs=182.1
Q ss_pred CccccceeeccCceEEEEEEECC-----eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--Cc-eEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EV-WTLV 599 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~-~~LV 599 (855)
.|...++||+|+||.||+|.+.. ..||+|.+..... .....|.+|+.+|++++||||+++++++. +. .++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667899999999999998632 3699999975432 22457889999999999999999999984 23 4899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+.+|+|.+++.. ....+++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 102 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp ECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 999999999999954 34568999999999999999999999 799999999999999999999999998542
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~ 727 (855)
...++.++|||||||++|+|+| |.+||....... ..+..+. ...
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--------~~~ 248 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR--------RLP 248 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC--------CCC
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC--------CCC
Confidence 2346789999999999999999 556665433221 1222211 112
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
.+...+..+.+|+.+||+.||.+||++ .++++.|+.+....
T Consensus 249 ~~~~~~~~l~~li~~~l~~~p~~Rps~-~~ll~~l~~~~~~l 289 (298)
T 3pls_A 249 QPEYCPDSLYQVMQQCWEADPAVRPTF-RVLVGEVEQIVSAL 289 (298)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHHC
T ss_pred CCccchHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHHHH
Confidence 233445789999999999999999999 89999999986543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=320.72 Aligned_cols=231 Identities=28% Similarity=0.422 Sum_probs=183.6
Q ss_pred ccccceeeccCceEEEEEEE------CCeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec----CceEE
Q 003033 530 FDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL 598 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~L 598 (855)
|...++||+|+||.||++.+ .+..||||++..... .....|.+|+.+|++++||||+++++++. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48889999999999999876 357899999986532 12456899999999999999999999984 34789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... .+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 113 v~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 99999999999999532 48999999999999999999999 799999999999999999999999998542
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--------hccccccc-
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--------TGKLKNLL- 721 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--------~~~~~~~~- 721 (855)
...++.++|||||||++|+|+||..||........... ...+...+
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 12345679999999999999999999965432111000 00001111
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.......+...+..+.+|+.+||+.||.+||++ .++++.|+.+...
T Consensus 266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~ell~~L~~l~~~ 311 (318)
T 3lxp_A 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTF-ENLIPILKTVHEK 311 (318)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred cccCCCCCccccHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHHHh
Confidence 112223444566889999999999999999999 8999999988553
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=333.34 Aligned_cols=222 Identities=21% Similarity=0.277 Sum_probs=175.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhc-CCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~L 598 (855)
.++|...+.||+|+||.||+|... +..||||+++.... .....+.+|+.+|.++ +|||||+++++|. +..+|
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357889999999999999999987 57899999986532 2345688999999987 8999999999984 46899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++||||||||+||||+.++++||+|||+..
T Consensus 131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999998543 458999999999999999999999 899999999999999999999999998542
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccccCCCCCCCChh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++|||||||++|||++|++||........... ...+...+......+|..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 23467899999999999999999999963311000000 000000000111234555
Q ss_pred hHHHHHHHHHHhhccCCCCCCCh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+..+.+|+.+||+.||.+||+.
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCC
Confidence 67889999999999999999995
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=314.63 Aligned_cols=223 Identities=23% Similarity=0.354 Sum_probs=180.6
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..+.|...+.||+|+||.||+|... +..||+|++..........|.+|+.+|..++||||+++++++. +..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467999999999999999999987 6789999998776666788999999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
|+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 97 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 99999999988542 2458999999999999999999999 79999999999999999999999999732
Q ss_pred -----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 003033 675 -----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 675 -----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
....++.++|||||||++|+|++|.+||............... ++.....+..
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~ 247 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----DPPTLLTPSK 247 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSSGGG
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc----CCcccCCccc
Confidence 2345778999999999999999999999766544332221110 0111112334
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+..+.+|+.+||..||.+||++ .++
T Consensus 248 ~~~~l~~li~~~l~~dp~~Rps~-~~l 273 (302)
T 2j7t_A 248 WSVEFRDFLKIALDKNPETRPSA-AQL 273 (302)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCH-HHH
T ss_pred cCHHHHHHHHHHcccChhhCCCH-HHH
Confidence 45789999999999999999999 555
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=329.00 Aligned_cols=230 Identities=18% Similarity=0.255 Sum_probs=179.0
Q ss_pred cccCCccccceeecc--CceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEecee--cCce
Q 003033 525 GATHNFDPSLKIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVW 596 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G--~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~ 596 (855)
...++|...++||+| +||.||+|... +..||||++....... ...+.+|+.+|+.++|||||+++++| .+..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 345689999999999 99999999987 6889999997653322 35678899999999999999999998 3468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-- 674 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-- 674 (855)
+||||||++|+|.+++... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999998643 23459999999999999999999999 89999999999999999999999999632
Q ss_pred ------------------------------cc--CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccc
Q 003033 675 ------------------------------AS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNL 720 (855)
Q Consensus 675 ------------------------------~~--~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--~~~~~~~ 720 (855)
.. ..++.++|||||||++|+|++|++||........... .+.+..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 11 3578899999999999999999999965432221111 1111000
Q ss_pred cC-------------------------------------CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 721 LD-------------------------------------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 721 ~d-------------------------------------~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+ .....++...+..+.+|+.+||..||.+||++ .+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta-~ell 332 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA-STLL 332 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH-HHHT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH-HHHh
Confidence 00 00111233455789999999999999999999 6664
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-35 Score=314.03 Aligned_cols=218 Identities=25% Similarity=0.344 Sum_probs=172.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--------------------------ChhhHHHHHHHHH
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------------------GPSEFQQEIDILS 578 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------------------------~~~~f~~Ei~iL~ 578 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....|.+|+.+|+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357999999999999999999875 688999999764321 1356889999999
Q ss_pred hcCCCcceeEeceec----CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccc
Q 003033 579 KIRHPNLVTLVGACP----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654 (855)
Q Consensus 579 ~l~HpnIV~l~g~~~----~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLK 654 (855)
+++||||+++++++. +..++||||+++|+|.+++. ..++++..+..++.||+.||.|||+ ++|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCC
Confidence 999999999999984 35789999999999988652 3469999999999999999999999 799999999
Q ss_pred cCceeeCCCCcEEEeecccccc-------------------------CC---CCcchhHHHHHHHHHHHHhCCCCCCCch
Q 003033 655 PANILLDANFVSKLSDFEFLAS-------------------------GE---LTPKSDVYSFGIILLRLLTGRPALGITK 706 (855)
Q Consensus 655 p~NILld~~~~~KL~DFg~~~~-------------------------~~---~t~ksDVwSfGvvl~elltG~~pf~~~~ 706 (855)
|+|||++.++.+||+|||+... .. ++.++|||||||++|+|++|++||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999985321 11 2567899999999999999999997654
Q ss_pred HHHHH--HhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 707 EVQYA--LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 707 ~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..... +...... .+. +...+..+.+|+.+||+.||.+||++ .+++
T Consensus 245 ~~~~~~~~~~~~~~---~~~----~~~~~~~l~~li~~~l~~dp~~R~s~-~e~l 291 (298)
T 2zv2_A 245 IMCLHSKIKSQALE---FPD----QPDIAEDLKDLITRMLDKNPESRIVV-PEIK 291 (298)
T ss_dssp HHHHHHHHHHCCCC---CCS----SSCCCHHHHHHHHHHTCSCTTTSCCH-HHHT
T ss_pred HHHHHHHHhcccCC---CCC----ccccCHHHHHHHHHHhhcChhhCCCH-HHHh
Confidence 43221 1111110 011 12345779999999999999999999 5653
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=325.72 Aligned_cols=221 Identities=22% Similarity=0.397 Sum_probs=178.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|++++|||||+++++|. +..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 357899999999999999999986 678999999865432 2356889999999999999999999984 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC---CcEEEeeccccc--
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFEFLA-- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~~KL~DFg~~~-- 675 (855)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.+ +.+||+|||+..
T Consensus 108 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 108 DLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp CCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999853 3468999999999999999999999 799999999999999765 459999998531
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++|||||||++|+|++|.+||........ .+..+.. +.....| ..
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~-~~ 256 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY----DYPSPEW-DT 256 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC----CCCTTGG-GG
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC----CCCcccc-cC
Confidence 23578899999999999999999999976554322 2222221 1111112 23
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+..+.+|+.+||..||.+||++ .+++
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~-~e~l 283 (362)
T 2bdw_A 257 VTPEAKSLIDSMLTVNPKKRITA-DQAL 283 (362)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCH-HHHT
T ss_pred CCHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 45789999999999999999999 5554
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=321.96 Aligned_cols=231 Identities=24% Similarity=0.427 Sum_probs=187.3
Q ss_pred ccCCccccceeeccCceEEEEEEEC---------CeEEEEEEecCCCC-CChhhHHHHHHHHHhc-CCCcceeEeceec-
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP- 593 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~- 593 (855)
..++|...+.||+|+||.||+|.+. +..||||++..... .....+.+|+.+|.++ +||||++++++|.
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 4568999999999999999999874 35799999976432 1245688999999999 8999999999984
Q ss_pred -CceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCcee
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NIL 659 (855)
+..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+ ++|+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 468999999999999999964331 2348999999999999999999999 79999999999999
Q ss_pred eCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH-
Q 003033 660 LDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY- 710 (855)
Q Consensus 660 ld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~- 710 (855)
++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||........
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 9999999999998532 1235678999999999999999 9999976543221
Q ss_pred -HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 711 -ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 711 -~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.+..+. ....+...+..+.+|+.+||..||.+||++ .++++.|+.+...
T Consensus 270 ~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~ell~~L~~l~~~ 319 (334)
T 2pvf_A 270 KLLKEGH--------RMDKPANCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRILTL 319 (334)
T ss_dssp HHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred HHHhcCC--------CCCCCccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHhc
Confidence 122211 112333455789999999999999999999 8999999998553
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=323.19 Aligned_cols=233 Identities=23% Similarity=0.395 Sum_probs=188.7
Q ss_pred hhhcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEecee
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGAC 592 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~ 592 (855)
++....++|...+.||+|+||.||+|...+ ..||||.+...... ....+.+|+.+|.++ +||||++++++|
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 445566789999999999999999998753 37999999765322 245688999999999 899999999998
Q ss_pred c--CceEEEEEecCCCCHHHHhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCcee
Q 003033 593 P--EVWTLVYEYLPNGSLEDRLSCKD-----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659 (855)
Q Consensus 593 ~--~~~~LV~Ey~~~GsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NIL 659 (855)
. +..++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+ ++|+||||||+|||
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEE
Confidence 4 46899999999999999985421 13468999999999999999999999 79999999999999
Q ss_pred eCCCCcEEEeeccccc---------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH---H
Q 003033 660 LDANFVSKLSDFEFLA---------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKE---V 708 (855)
Q Consensus 660 ld~~~~~KL~DFg~~~---------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~---~ 708 (855)
++.++.+||+|||+.. ...++.++|||||||++|+|+| |.+||..... .
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 276 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence 9999999999998532 2346788999999999999999 9999965432 2
Q ss_pred HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 709 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 709 ~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
......+. ....|...+..+.+|+.+||+.||.+||++ .++++.|+.+.
T Consensus 277 ~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-~~l~~~L~~~~ 325 (333)
T 2i1m_A 277 YKLVKDGY--------QMAQPAFAPKNIYSIMQACWALEPTHRPTF-QQICSFLQEQA 325 (333)
T ss_dssp HHHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred HHHHhcCC--------CCCCCCCCCHHHHHHHHHHhccChhhCcCH-HHHHHHHHHHH
Confidence 22222211 112233445789999999999999999999 88999998874
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=329.02 Aligned_cols=227 Identities=26% Similarity=0.425 Sum_probs=182.4
Q ss_pred CccccceeeccCceEEEEEEEC---C--eEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec---CceEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR---H--MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLV 599 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~---~--~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV 599 (855)
.|...+.||+|+||.||+|.+. + ..||||.++.... .....|.+|+.+|++++||||++++++|. +..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677789999999999999874 1 4689999875432 23467999999999999999999999872 357899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 170 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999999953 33468899999999999999999999 799999999999999999999999998532
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHhhcccccccCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--QYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~--~~~~~~~~~~~~~d~~~~~ 727 (855)
...++.++|||||||++|||+| |.+||...... ...+..+. ...
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~--------~~~ 316 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLL 316 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC--------CCC
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC--------CCC
Confidence 2456789999999999999999 78888654321 11222221 112
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
.|...+..+.+|+.+||..||.+||++ .++++.|+.+....
T Consensus 317 ~p~~~~~~l~~li~~cl~~dp~~RPs~-~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 317 QPEYCPDPLYEVMLKCWHPKAEMRPSF-SELVSRISAIFSTF 357 (373)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHHhc
Confidence 233455789999999999999999999 89999999986643
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=310.30 Aligned_cols=224 Identities=24% Similarity=0.350 Sum_probs=178.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
+.|.....||+|+||.||+|... +..||||.+..........+.+|+.++..++||||++++++|. +..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 34556668999999999999985 5789999998766556678999999999999999999999984 4678999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeecccccc------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEFLAS------ 676 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~~~~------ 676 (855)
++|+|.+++........+++..+..++.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999999765444567899999999999999999999 79999999999999987 89999999985321
Q ss_pred ---------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 677 ---------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 677 ---------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
..++.++|||||||++|+|++|++||................ ......|...+..
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 254 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF----KVHPEIPESMSAE 254 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH----CCCCCCCTTSCHH
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc----cccccccccCCHH
Confidence 126778999999999999999999996432222111110000 1112334455678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|+.+||+.||.+||++ .+++
T Consensus 255 ~~~li~~~l~~dp~~Rps~-~~ll 277 (295)
T 2clq_A 255 AKAFILKCFEPDPDKRACA-NDLL 277 (295)
T ss_dssp HHHHHHHTTCSSTTTSCCH-HHHH
T ss_pred HHHHHHHHccCChhhCCCH-HHHh
Confidence 9999999999999999999 5553
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.10 Aligned_cols=227 Identities=26% Similarity=0.399 Sum_probs=164.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..+|...+.||+|+||.||+|... +..||||+++.... .....+.+|+.+|++++||||+++++++. +..+||||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457889999999999999999876 68899999976543 23567899999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhccc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 602 YLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~---~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
|++ |+|.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 6999988532 122458999999999999999999999 799999999999999999999999998431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----ccccc-----c---
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GKLKN-----L--- 720 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~~~~-----~--- 720 (855)
...++.++|||||||++|+|+||++||............ +.... .
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 134688999999999999999999999766543321111 10000 0
Q ss_pred --cCC-C------------CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 721 --LDP-L------------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 721 --~d~-~------------~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
..+ . ....+...+..+.+|+.+||..||.+||++ .++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-~e~ 291 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA-KQA 291 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH-HHH
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCH-HHH
Confidence 000 0 000111235679999999999999999999 555
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=329.12 Aligned_cols=224 Identities=21% Similarity=0.330 Sum_probs=180.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
.++|...+.||+|+||.||+|... +..||+|++..........+.+|+.+|..++|||||+++++|. +..+|||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457999999999999999999886 5789999997654334557899999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC--CCcEEEeeccccc-----
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA--NFVSKLSDFEFLA----- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~~KL~DFg~~~----- 675 (855)
+++|+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+..
T Consensus 130 ~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 130 LSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp CCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 999999999853 23468999999999999999999999 89999999999999974 5789999998432
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|+||.+||...................+ ...+...+..+
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~ 281 (387)
T 1kob_A 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD---EDAFSSVSPEA 281 (387)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC---SSTTTTSCHHH
T ss_pred cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---ccccccCCHHH
Confidence 24477899999999999999999999987654432221111100011 11122345789
Q ss_pred HHHHHHhhccCCCCCCChHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+|+.+||..||.+||++ .+++
T Consensus 282 ~~li~~~L~~dP~~Rpt~-~ell 303 (387)
T 1kob_A 282 KDFIKNLLQKEPRKRLTV-HDAL 303 (387)
T ss_dssp HHHHHTTSCSSGGGSCCH-HHHH
T ss_pred HHHHHHHcCCChhHCcCH-HHHh
Confidence 999999999999999999 6664
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=320.00 Aligned_cols=212 Identities=25% Similarity=0.351 Sum_probs=176.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||++... +..||||+++.. .......+.+|+.+|..++||||+++++++. +..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56889999999999999999886 688999999753 2234567889999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.+|.+||+|||+.
T Consensus 86 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp CCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 999999999999542 458999999999999999999999 89999999999999999999999999853
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
....++.++|||||||++|||++|++||...+......... .. ...+|...+..+.+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~-----~~~~p~~~~~~~~~ 232 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL--NA-----ELRFPPFFNEDVKD 232 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HC-----CCCCCTTSCHHHHH
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hC-----CCCCCCCCCHHHHH
Confidence 23456889999999999999999999997655433221110 00 11244455678999
Q ss_pred HHHHhhccCCCCCC
Q 003033 739 LAMRCCEMSRKSRP 752 (855)
Q Consensus 739 L~~~Cl~~dP~~RP 752 (855)
|+.+||..||.+||
T Consensus 233 li~~lL~~dp~~R~ 246 (318)
T 1fot_A 233 LLSRLITRDLSQRL 246 (318)
T ss_dssp HHHHHTCSCTTTCT
T ss_pred HHHHHhccCHHHcC
Confidence 99999999999999
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=310.99 Aligned_cols=224 Identities=23% Similarity=0.310 Sum_probs=178.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|...++||+|+||.||++... +..||+|++..... .....+.+|+.+|++++||||++++++|. +..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888999999999999999886 57899999976543 34578999999999999999999999984 467899999
Q ss_pred cCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeeccccc---
Q 003033 603 LPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFLA--- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~~--- 675 (855)
+++|+|.+++... .....+++..+..|+.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988432 123569999999999999999999999 799999999999999 456889999998542
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+.++.++|||||||++|+|++|++||....................... ...+..
T Consensus 179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 254 (285)
T 3is5_A 179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC----RPLTPQ 254 (285)
T ss_dssp --------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC------CCCCHH
T ss_pred CcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccccccc----CcCCHH
Confidence 23467899999999999999999999976654332211111000001111 113467
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|+.+||+.||.+||++ .+++
T Consensus 255 ~~~li~~~L~~dP~~Rps~-~e~l 277 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSA-AQVL 277 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCH-HHHH
T ss_pred HHHHHHHHccCChhhCcCH-HHHh
Confidence 8999999999999999999 6664
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=319.92 Aligned_cols=214 Identities=25% Similarity=0.329 Sum_probs=170.8
Q ss_pred cCCccccceeeccCceEEEEEEE-----CCeEEEEEEecCCCC----CChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL----QGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~~----~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
.++|...+.||+|+||.||++.. .+..||||+++.... .....+.+|+.+|..++||||+++++++. +.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35789999999999999999987 368899999986532 23456889999999999999999999984 46
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.+|||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 89999999999999999543 358899999999999999999999 799999999999999999999999998431
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCCh
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++|||||||++|+|++|++||.............. ....+|.
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-------~~~~~p~ 242 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK-------CKLNLPP 242 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-------TCCCCCT
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh-------CCCCCCC
Confidence 23467889999999999999999999976554332111100 0112344
Q ss_pred hhHHHHHHHHHHhhccCCCCCCC
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs 753 (855)
..+..+.+|+.+||..||.+||+
T Consensus 243 ~~~~~~~~li~~~L~~dp~~R~~ 265 (327)
T 3a62_A 243 YLTQEARDLLKKLLKRNAASRLG 265 (327)
T ss_dssp TSCHHHHHHHHHHSCSCGGGSTT
T ss_pred CCCHHHHHHHHHHHhcCHhhccC
Confidence 45678999999999999999994
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=308.89 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=183.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.++|...+.||+|+||.||+|... +..||||++.... ....+.+|+.++..+ +|||++.+++++. ...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 457999999999999999999964 6899999987543 345789999999999 7999999999884 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc-----EEEeeccccc-
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-----SKLSDFEFLA- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-----~KL~DFg~~~- 675 (855)
|+ +|+|.+++... ..++++..+..|+.||+.||.|||+ ++|+||||||+|||++.++. +||+|||+..
T Consensus 87 ~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 87 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred ec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 99 99999999643 3459999999999999999999999 79999999999999987766 9999998532
Q ss_pred -------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch---HHH--HHHhhccccc
Q 003033 676 -------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK---EVQ--YALDTGKLKN 719 (855)
Q Consensus 676 -------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~---~~~--~~~~~~~~~~ 719 (855)
+..++.++|||||||++|+|++|++||.... ... ..+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 240 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence 1345778999999999999999999997532 111 1111111111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
....... ..+..+.+|+.+||+.||.+||++ ++|++.|+.+...
T Consensus 241 ~~~~~~~----~~~~~l~~li~~~l~~dp~~RP~~-~~l~~~l~~~~~~ 284 (298)
T 1csn_A 241 PLRELCA----GFPEEFYKYMHYARNLAFDATPDY-DYLQGLFSKVLER 284 (298)
T ss_dssp CHHHHTT----TSCHHHHHHHHHHHHCCTTCCCCH-HHHHHHHHHHHHH
T ss_pred cHHHHHh----hCcHHHHHHHHHHhcCCcccCCCH-HHHHHHHHHHHHh
Confidence 0011111 234789999999999999999999 8999999988654
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=327.53 Aligned_cols=236 Identities=24% Similarity=0.304 Sum_probs=187.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceecC----ceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~~LV 599 (855)
.+.|...++||+|+||.||+|.+. +..||||++.... ......+.+|+.+|++++||||+++++++.+ ..+||
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 356889999999999999999987 6889999997543 2345678899999999999999999998832 56899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee----CCCCcEEEeeccccc
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFEFLA 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~~KL~DFg~~~ 675 (855)
|||+++|+|.+++........+++..+..|+.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 9999999999999655444559999999999999999999999 799999999999999 888899999998542
Q ss_pred c--------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCc------hHHHHHHhhccc
Q 003033 676 S--------------------------------GELTPKSDVYSFGIILLRLLTGRPALGIT------KEVQYALDTGKL 717 (855)
Q Consensus 676 ~--------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~------~~~~~~~~~~~~ 717 (855)
. ..++.++|||||||++|+|+||++||... ......+..+..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 1 22345799999999999999999999521 122222222211
Q ss_pred cccc----------------CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 718 KNLL----------------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 718 ~~~~----------------d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+ .+.....+......+.+|+.+||+.||.+||++ +++++.++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~-~e~l~~l~~il 308 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF-DQFFAETSDIL 308 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCH-HHHHHHHHHHH
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccH-HHHHHHHHHHh
Confidence 1000 011223445677889999999999999999999 88888888763
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=319.75 Aligned_cols=232 Identities=23% Similarity=0.299 Sum_probs=184.4
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec------C
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------E 594 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~ 594 (855)
+....++|...+.||+|+||.||++... +..||||++..........+.+|+.++..++||||+++++++. .
T Consensus 24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 3344568999999999999999999974 6889999987654444567899999999999999999999883 2
Q ss_pred ceEEEEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..++||||+++|+|.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 578999999999999988542 234579999999999999999999999 7999999999999999999999999983
Q ss_pred cc-----------------------------c--------CCCCcchhHHHHHHHHHHHHhCCCCCCCch----HHHHHH
Q 003033 674 LA-----------------------------S--------GELTPKSDVYSFGIILLRLLTGRPALGITK----EVQYAL 712 (855)
Q Consensus 674 ~~-----------------------------~--------~~~t~ksDVwSfGvvl~elltG~~pf~~~~----~~~~~~ 712 (855)
.. . ..++.++|||||||++|+|++|++||.... ......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 21 0 114779999999999999999999994211 111111
Q ss_pred hhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 713 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 713 ~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
.. ......+...+..+.+|+.+||+.||.+||++ .++++.|+.+.
T Consensus 261 ~~--------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll~~L~~~~ 305 (317)
T 2buj_A 261 QN--------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHI-PLLLSQLEALQ 305 (317)
T ss_dssp HC--------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHTC
T ss_pred hc--------cCCCCccccCCHHHHHHHHHHhhcChhhCCCH-HHHHHHhhhcC
Confidence 11 01111122345789999999999999999999 89999998763
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=324.18 Aligned_cols=211 Identities=23% Similarity=0.333 Sum_probs=178.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||++... +..||||++.... ......+.+|+.+|..++||||+++++++. +..+|||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999986 6889999996532 234567889999999999999999999984 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 121 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999643 358999999999999999999999 89999999999999999999999999843
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
....++.++|||||||++|+|++|++||........ .+..+. ..+|...+..+
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~---------~~~p~~~~~~~ 265 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK---------VRFPSHFSSDL 265 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------CCCCTTCCHHH
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC---------CCCCCCCCHHH
Confidence 234578899999999999999999999976654332 122221 12444556789
Q ss_pred HHHHHHhhccCCCCCCC
Q 003033 737 ANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs 753 (855)
.+|+.+||+.||.+||+
T Consensus 266 ~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHHHHHHSCSCTTTCTT
T ss_pred HHHHHHHhhcCHHhccC
Confidence 99999999999999998
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=327.43 Aligned_cols=213 Identities=23% Similarity=0.290 Sum_probs=178.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~L 598 (855)
.++|...+.||+|+||.||+|... +..||||+++.. .......+.+|+.+|..+ +||||+++++++. +..||
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999986 578999999753 123455688999999998 6999999999984 46899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc--
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS-- 676 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~-- 676 (855)
||||+++|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+||||+.++++||+|||+...
T Consensus 102 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 99999999999999543 458999999999999999999999 8999999999999999999999999986431
Q ss_pred -----------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChh
Q 003033 677 -----------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 677 -----------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~ 731 (855)
..++.++|||||||++|||++|++||...+..... +..+. ..+|..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------~~~p~~ 246 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE---------VVYPTW 246 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------CCCCTT
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------CCCCCC
Confidence 22677899999999999999999999876544322 11211 134445
Q ss_pred hHHHHHHHHHHhhccCCCCCCCh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+..+.+|+.+||..||.+||++
T Consensus 247 ~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 247 LHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CCHHHHHHHHHHhhhCHHHccCC
Confidence 56789999999999999999997
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=321.30 Aligned_cols=223 Identities=22% Similarity=0.322 Sum_probs=177.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC-----CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH-----SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~-----~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
+.|...+.||+|+||.||+|... +..||||++... .......|.+|+.+|..++|||||+++++|. +..+|
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46889999999999999999886 688999998642 1224567999999999999999999999984 46899
Q ss_pred EEEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc---EEEeecccc
Q 003033 599 VYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV---SKLSDFEFL 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---~KL~DFg~~ 674 (855)
|||||++|+|.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++. +||+|||+.
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887533 223458999999999999999999999 89999999999999976654 999999743
Q ss_pred c-------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH-HHHhhcccccccCCCCCCC
Q 003033 675 A-------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 ~-------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~-~~~~~~~~~~~~d~~~~~~ 728 (855)
. ...++.++|||||||++|+|++|++||....... ..+..+... .....|
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~----~~~~~~ 256 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK----MNPRQW 256 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCC----CCHHHH
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCC----CCcccc
Confidence 1 2346789999999999999999999997654321 111222111 000001
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||..||.+||++ .+++
T Consensus 257 -~~~s~~~~~li~~~L~~dP~~R~s~-~e~l 285 (351)
T 3c0i_A 257 -SHISESAKDLVRRMLMLDPAERITV-YEAL 285 (351)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred -ccCCHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 1235789999999999999999999 5664
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-35 Score=318.24 Aligned_cols=230 Identities=26% Similarity=0.452 Sum_probs=185.2
Q ss_pred CCccccceeeccCceEEEEEEEC--Ce--EEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HM--QVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~--~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV 599 (855)
++|...+.||+|+||.||+|... +. .||||.+.... ......|.+|+.+|.++ +||||+++++++. +..+||
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 46888999999999999999875 44 45999987542 23456799999999999 8999999999984 468899
Q ss_pred EEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 600 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
|||+++|+|.+++.... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence 99999999999996432 23469999999999999999999999 899999999999999999999
Q ss_pred EEeeccccc------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccccc
Q 003033 667 KLSDFEFLA------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 667 KL~DFg~~~------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
||+|||+.. ...++.++|||||||++|+|+| |++||............ .
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~------~ 255 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL------P 255 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG------G
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh------h
Confidence 999998542 1235778999999999999998 99999765543321111 1
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.......|...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 256 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~ell~~L~~~~~ 300 (327)
T 1fvr_A 256 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRMLE 300 (327)
T ss_dssp GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHH
Confidence 111122344556789999999999999999999 889999998855
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=318.45 Aligned_cols=233 Identities=24% Similarity=0.387 Sum_probs=176.6
Q ss_pred ccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHH--hcCCCcceeEeceec-------Cce
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILS--KIRHPNLVTLVGACP-------EVW 596 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~--~l~HpnIV~l~g~~~-------~~~ 596 (855)
..++|...+.||+|+||.||+|...+..||||++... ....+..|.+++. .++||||+++++.+. ..+
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 3467899999999999999999999999999999743 3445666666544 589999999997541 146
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC------CCceecccccCceeeCCCCcEEEee
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP------HSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~------~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
+|||||+++|+|.+++... .+++..+..|+.||+.||.|||+..+ .+|+||||||+|||++.++.+||+|
T Consensus 88 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 8999999999999999532 35899999999999999999999210 1999999999999999999999999
Q ss_pred cccccc----------------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCC-Cch---
Q 003033 671 FEFLAS----------------------------------------GELTPKSDVYSFGIILLRLLTGRPALG-ITK--- 706 (855)
Q Consensus 671 Fg~~~~----------------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~-~~~--- 706 (855)
||+... ..++.++|||||||++|||+||..||. ...
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 986521 112346899999999999999966542 111
Q ss_pred ----------------HHHHHHhhcccccccCCCCCCCC--hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 707 ----------------EVQYALDTGKLKNLLDPLAGDWP--FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 707 ----------------~~~~~~~~~~~~~~~d~~~~~~p--~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
............ ......|+ ...+..+.+|+.+||..||.+||++ .++++.|+.+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQR---PKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA-QXAEERMAELMMI 319 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCC---CCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCH-HHHHHHHHHHHHC
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccC---CCCCcccccccchHHHHHHHHHHHhcCChhhCcch-HHHHHHHHHHHHH
Confidence 011111111111 11112222 2356789999999999999999999 8999999998664
Q ss_pred C
Q 003033 769 C 769 (855)
Q Consensus 769 ~ 769 (855)
.
T Consensus 320 ~ 320 (336)
T 3g2f_A 320 W 320 (336)
T ss_dssp C
T ss_pred H
Confidence 3
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=325.60 Aligned_cols=218 Identities=24% Similarity=0.284 Sum_probs=179.6
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhc-CCCcceeEeceec--Cce
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW 596 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~ 596 (855)
...++|...+.||+|+||.||+|... +..||||+++... ......+..|..+|..+ +||||+++++++. +..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34568999999999999999999986 6889999997542 23456788999999987 8999999999984 468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
||||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.+|.+||+|||+..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999999543 358999999999999999999999 899999999999999999999999998532
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChh
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++|||||||++|||++|++||...+.......... ....+|..
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-------~~~~~p~~ 240 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-------DNPFYPRW 240 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-------CCCCCCTT
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-------CCCCCCcc
Confidence 23467889999999999999999999976654332111100 01234445
Q ss_pred hHHHHHHHHHHhhccCCCCCCChH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
.+..+.+|+.+||..||.+||++.
T Consensus 241 ~s~~~~~li~~lL~~dp~~R~~~~ 264 (345)
T 1xjd_A 241 LEKEAKDLLVKLFVREPEKRLGVR 264 (345)
T ss_dssp SCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred cCHHHHHHHHHHhcCCHhHcCCCh
Confidence 568899999999999999999983
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=348.41 Aligned_cols=218 Identities=25% Similarity=0.430 Sum_probs=182.1
Q ss_pred ceeeccCceEEEEEEEC----CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCCC
Q 003033 534 LKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 606 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~G 606 (855)
++||+|+||.||+|.+. +..||||+++..... ....|.+|+.+|.+++|||||+++++|. +.++||||||++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 47999999999999763 367999999865332 2467999999999999999999999994 4678999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.++|.. ...+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 455 ~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 455 PLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999953 2468999999999999999999999 899999999999999999999999997421
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
...++.++|||||||+||||+| |++||....... ..+..+. ....|...+..
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~--------~~~~p~~~~~~ 600 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE--------RMGCPAGCPRE 600 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--------CCCCCTTCCHH
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCCHH
Confidence 2357889999999999999998 999997655432 2222221 12344456688
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+.+|+.+||..||.+||++ .+|++.|+.+.
T Consensus 601 l~~li~~cl~~dP~~RPs~-~~l~~~L~~~~ 630 (635)
T 4fl3_A 601 MYDLMNLCWTYDVENRPGF-AAVELRLRNYY 630 (635)
T ss_dssp HHHHHHHHTCSSTTTSCCH-HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCH-HHHHHHHHHHH
Confidence 9999999999999999999 88999998763
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=320.28 Aligned_cols=235 Identities=24% Similarity=0.404 Sum_probs=186.7
Q ss_pred cCCccccceeeccCceEEEEEEE------CCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC----ce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~----~~ 596 (855)
..+|...+.||+|+||.||++.+ .+..||||++..........|.+|+.+|++++||||+++++++.. ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34688899999999999999985 357899999987554445679999999999999999999998732 57
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
++||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 8999999999999999643 2458999999999999999999999 7999999999999999999999999985321
Q ss_pred ----------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHH-HHHHhhc--------cccc
Q 003033 677 ----------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTG--------KLKN 719 (855)
Q Consensus 677 ----------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~-~~~~~~~--------~~~~ 719 (855)
..++.++|||||||++|+|+||..||...... ....... .+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 12456899999999999999999998643211 0000000 0000
Q ss_pred cc-CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 720 LL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 720 ~~-d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.+ .......|...+..+.+|+.+||..||.+||++ .++++.|+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-~el~~~L~~l~~ 322 (326)
T 2w1i_A 275 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF-RDLALRVDQIRD 322 (326)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHH
Confidence 11 111122344556889999999999999999999 899999998854
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=321.07 Aligned_cols=212 Identities=22% Similarity=0.294 Sum_probs=175.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhc-CCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV 599 (855)
++|...+.||+|+||.||++... +..||||++....... ...+.+|+.+|.++ +|||||+++++|. +..+||
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46889999999999999999986 5889999998654333 34578899999998 8999999999984 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++++||+|||+..
T Consensus 89 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 9999999999998543 358999999999999999999999 899999999999999999999999998542
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-----------HHHHHhhcccccccCC
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-----------VQYALDTGKLKNLLDP 723 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-----------~~~~~~~~~~~~~~d~ 723 (855)
...++.++|||||||++|||++|++||..... ....+..+
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-------- 234 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------- 234 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--------
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--------
Confidence 23467889999999999999999999964211 11111111
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
...+|...+..+.+|+.+||..||.+||+.
T Consensus 235 -~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 235 -QIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 123455566789999999999999999996
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=333.16 Aligned_cols=222 Identities=19% Similarity=0.354 Sum_probs=178.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.++|...+.||+|+||.||+|... +..||+|++...... ....+.+|+.+|+.++|||||++++++. +..+|||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 346888999999999999999875 688999999865432 2356889999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC---CCCcEEEeeccccc--
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFEFLA-- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~~KL~DFg~~~-- 675 (855)
||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++ .++.+||+|||+..
T Consensus 90 E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 90 DLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 999999999998543 458999999999999999999999 8999999999999998 56889999998531
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCCh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++|||||||++|+|++|.+||........ .+..+.. +.....|+
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~- 238 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY----DFPSPEWD- 238 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC----CCCTTTTT-
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCC----CCCccccc-
Confidence 23578899999999999999999999976554332 2222221 11122232
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+..+.+|+.+||+.||.+||++ .++++
T Consensus 239 ~~s~~~~~li~~~L~~dP~~Rpta-~e~L~ 267 (444)
T 3soa_A 239 TVTPEAKDLINKMLTINPSKRITA-AEALK 267 (444)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCCCH-HHHhc
Confidence 345789999999999999999999 55543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=311.51 Aligned_cols=232 Identities=25% Similarity=0.388 Sum_probs=183.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
..+|...+.||+|+||.||+|... +..||||++....... ...+.+|+.++++++||||++++++|. +..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 357999999999999999999875 6889999998643333 356889999999999999999999983 568899
Q ss_pred EEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 600 YEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
|||+++|+|.+++... .....+++..+..++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999998532 224568999999999999999999999 79999999999999999999999999742
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH----HHHHHhhcccccccCCCCCCCC
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE----VQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~----~~~~~~~~~~~~~~d~~~~~~p 729 (855)
....++.++|||||||++|+|++|..||..... ....+....+ .+. .+
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~---~~ 260 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY----PPL---PS 260 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS----CCC---CT
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC----CCC---cc
Confidence 224567899999999999999999999964321 1111111111 111 11
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
...+..+.+|+.+||..||.+||++ .+|++.|+.+.+..
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~-~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDV-TYVYDVAKRMHACT 299 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHHHhh
Confidence 2345789999999999999999999 89999999997753
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=311.25 Aligned_cols=221 Identities=25% Similarity=0.428 Sum_probs=181.3
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
+.++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.++++++||||++++++|. +..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467899999999999999999887 4679999986432 123456889999999999999999999984 45789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 87 v~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999998543 358999999999999999999999 79999999999999999999999999843
Q ss_pred -------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 675 -------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 -------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
....++.++|||||||++|+|++|.+||.............. ....+|...+..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 233 (279)
T 3fdn_A 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-------VEFTFPDFVTEG 233 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-------TCCCCCTTSCHH
T ss_pred cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-------CCCCCCCcCCHH
Confidence 234567899999999999999999999986654332211111 112234445678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+|+.+||+.||.+||++ .++++
T Consensus 234 ~~~li~~~l~~~p~~Rps~-~e~l~ 257 (279)
T 3fdn_A 234 ARDLISRLLKHNPSQRPML-REVLE 257 (279)
T ss_dssp HHHHHHHHCCSSGGGSCCH-HHHHH
T ss_pred HHHHHHHHhccChhhCCCH-HHHhh
Confidence 9999999999999999999 66654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.88 Aligned_cols=228 Identities=25% Similarity=0.355 Sum_probs=178.9
Q ss_pred ccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhc--CCCcceeEeceec------CceE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI--RHPNLVTLVGACP------EVWT 597 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l--~HpnIV~l~g~~~------~~~~ 597 (855)
..++|...+.||+|+||.||+|.+++..||||++... ....+.+|.+++..+ +||||+++++++. ...+
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEECCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 3467999999999999999999999999999998643 334566777777665 8999999999873 3578
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCceecccccCceeeCCCCcEEEeecc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC-----KPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-----~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
+||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +..+|+||||||+|||++.++.+||+|||
T Consensus 112 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp EEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 99999999999999953 2589999999999999999999982 01299999999999999999999999998
Q ss_pred cccc-----------------------------CCCCc------chhHHHHHHHHHHHHhC----------CCCCCCch-
Q 003033 673 FLAS-----------------------------GELTP------KSDVYSFGIILLRLLTG----------RPALGITK- 706 (855)
Q Consensus 673 ~~~~-----------------------------~~~t~------ksDVwSfGvvl~elltG----------~~pf~~~~- 706 (855)
+... ..++. ++|||||||++|||+|| ..||....
T Consensus 188 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 188 LAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp TCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 5410 11122 38999999999999999 66664211
Q ss_pred ------HHHHHHhhcccccccCCCCCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 707 ------EVQYALDTGKLKNLLDPLAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 707 ------~~~~~~~~~~~~~~~d~~~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
......... .....+| ...+..+.+|+.+||+.||.+||++ .+|++.|+.+...
T Consensus 268 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-~ell~~L~~l~~~ 332 (337)
T 3mdy_A 268 SDPSYEDMREIVCIK-------KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA-LRVKKTLAKMSES 332 (337)
T ss_dssp SSCCHHHHHHHHTTS-------CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCH-HHHHHHHHHHHHT
T ss_pred CCCchhhhHHHHhhh-------ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCH-HHHHHHHHHHHhh
Confidence 111111111 1112222 2567889999999999999999999 8999999988653
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=321.52 Aligned_cols=240 Identities=24% Similarity=0.305 Sum_probs=187.2
Q ss_pred CcccccchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-----CCcc
Q 003033 513 QFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----HPNL 585 (855)
Q Consensus 513 ~~~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----HpnI 585 (855)
.....|++.+.....++|...++||+|+||.||+|... +..||||++.... .....+..|+.+|..++ ||||
T Consensus 20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 34456777777778899999999999999999999984 6889999997421 23456788999999997 9999
Q ss_pred eeEecee--cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-
Q 003033 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA- 662 (855)
Q Consensus 586 V~l~g~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~- 662 (855)
|++++++ .+..+|||||+ +|+|.+++.... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDP 173 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCT
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccc
Confidence 9999988 45789999999 999999996432 3458999999999999999999999 89999999999999975
Q ss_pred ------------------------CCcEEEeecccc----------------------ccCCCCcchhHHHHHHHHHHHH
Q 003033 663 ------------------------NFVSKLSDFEFL----------------------ASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 663 ------------------------~~~~KL~DFg~~----------------------~~~~~t~ksDVwSfGvvl~ell 696 (855)
++.+||+|||+. ....++.++|||||||++|+|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 789999999743 2346788999999999999999
Q ss_pred hCCCCCCCchHHHHHHhhcccc-----------------ccc--CCCCCCCChh--------------------hHHHHH
Q 003033 697 TGRPALGITKEVQYALDTGKLK-----------------NLL--DPLAGDWPFV--------------------QAEQLA 737 (855)
Q Consensus 697 tG~~pf~~~~~~~~~~~~~~~~-----------------~~~--d~~~~~~p~~--------------------~~~~l~ 737 (855)
||++||................ ... +.....||.. ....+.
T Consensus 254 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (360)
T 3llt_A 254 TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333 (360)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred HCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence 9999997654332211110000 000 0011122211 125688
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||+.||.+||++ .+++
T Consensus 334 ~li~~~L~~dP~~Rpta-~elL 354 (360)
T 3llt_A 334 DFLYSILQIDPTLRPSP-AELL 354 (360)
T ss_dssp HHHHHHCCSSGGGSCCH-HHHT
T ss_pred HHHHHHhcCChhhCCCH-HHHh
Confidence 99999999999999999 5553
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=326.70 Aligned_cols=234 Identities=18% Similarity=0.249 Sum_probs=178.3
Q ss_pred ccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCCC-----------hhhHHHHHHHHHhcCCCccee
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-----------PSEFQQEIDILSKIRHPNLVT 587 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~~-----------~~~f~~Ei~iL~~l~HpnIV~ 587 (855)
..++|...++||+|+||.||+|.+.. ..||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998853 579999987543110 112334555667778999999
Q ss_pred EeceecC------ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 588 LVGACPE------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 588 l~g~~~~------~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
+++++.. ..+|||||+ +|+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEe
Confidence 9999843 378999999 9999999964 23569999999999999999999999 7999999999999998
Q ss_pred --CCCcEEEeeccccc--------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH
Q 003033 662 --ANFVSKLSDFEFLA--------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE 707 (855)
Q Consensus 662 --~~~~~KL~DFg~~~--------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~ 707 (855)
.++.+||+|||+.. +..++.++|||||||++|||+||++||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 88999999998541 12367789999999999999999999974211
Q ss_pred ---HHHHHh---hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 708 ---VQYALD---TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 708 ---~~~~~~---~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
...... ...+..++++... +...+..+.+|+..||..||.+||++ ++|++.|+.+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~-~~l~~~l~~~~~~ 330 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLY-ENLRDILLQGLKA 330 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCH-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCH-HHHHHHHHHHHHH
Confidence 110011 1111222221100 01234789999999999999999999 8999999988554
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=320.74 Aligned_cols=231 Identities=22% Similarity=0.284 Sum_probs=178.6
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC-----CCCChhhHHHHHHHHHhcCCCcceeEeceec--
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH-----SLQGPSEFQQEIDILSKIRHPNLVTLVGACP-- 593 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~-----~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-- 593 (855)
+....++|...+.||+|+||.||+|... +..||||++... .......|.+|+.+|++++||||++++++|.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3445568999999999999999999886 478999998653 2234567999999999999999999999994
Q ss_pred CceEEEEEecCCCCHHHHhcccC-------------------------------------CCCCCCHHHHHHHHHHHHHH
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKD-------------------------------------NSPPLSWQTRIRIATELCSV 636 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------~~~~l~~~~~~~i~~qia~a 636 (855)
+..+|||||+++|+|.+++.... ....+++..+..|+.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 45789999999999999984210 01224577788999999999
Q ss_pred HHHHhhcCCCCceecccccCceeeCCCC--cEEEeeccccc-------------------------------cCCCCcch
Q 003033 637 LIFLHSCKPHSIVHGDLKPANILLDANF--VSKLSDFEFLA-------------------------------SGELTPKS 683 (855)
Q Consensus 637 L~yLH~~~~~~IvHrDLKp~NILld~~~--~~KL~DFg~~~-------------------------------~~~~t~ks 683 (855)
|.|||+ ++|+||||||+|||++.++ .+||+|||+.. ...++.++
T Consensus 181 l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 999999 7999999999999998766 89999997431 14577899
Q ss_pred hHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 684 DVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 684 DVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
|||||||++|+|++|++||.............. .... .........+..+.+|+.+||+.||.+||++ .++++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~~l~ 330 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN--KKLC-FENPNYNVLSPLARDLLSNLLNRNVDERFDA-MRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC-TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH-HHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHh--cccc-cCCcccccCCHHHHHHHHHHcCCChhHCCCH-HHHhc
Confidence 999999999999999999976654432221110 0000 0011111245789999999999999999999 56643
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=325.17 Aligned_cols=218 Identities=25% Similarity=0.356 Sum_probs=177.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||++... .......+.+|+.+|+.++||||+++++++. +..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 357999999999999999999984 688999998643 1233467899999999999999999999984 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+ +|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 88 ~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 78999988543 358999999999999999999999 799999999999999999999999998532
Q ss_pred --------------------cCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 --------------------SGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 --------------------~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+..+ +.++|||||||++|+|++|++||...... .+...+.......|...+.
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-------~~~~~i~~~~~~~p~~~s~ 233 (336)
T 3h4j_B 161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-------NLFKKVNSCVYVMPDFLSP 233 (336)
T ss_dssp SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-------TCBCCCCSSCCCCCTTSCH
T ss_pred CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHcCCCCCcccCCH
Confidence 1112 57899999999999999999999643211 1111112222334555678
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.+|+.+||..||.+||++ ++++
T Consensus 234 ~~~~li~~~L~~dP~~Rpt~-~eil 257 (336)
T 3h4j_B 234 GAQSLIRRMIVADPMQRITI-QEIR 257 (336)
T ss_dssp HHHHHHHTTSCSSGGGSCCH-HHHT
T ss_pred HHHHHHHHHcCCChhHCcCH-HHHH
Confidence 89999999999999999999 6663
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=310.43 Aligned_cols=225 Identities=24% Similarity=0.296 Sum_probs=172.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~E 601 (855)
++|...++||+|+||.||+|... +..||||++....... ...+.+|+.+|.+++||||+++++++ .+..+||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46889999999999999999986 5789999998654332 36788999999999999999999998 346889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++ +|.+.+.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred cCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9975 56665532 23469999999999999999999999 799999999999999999999999997431
Q ss_pred -------------------c-CCCCcchhHHHHHHHHHHHHhCCCCC-CCchHHHHHHhh----ccc--------ccccC
Q 003033 676 -------------------S-GELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDT----GKL--------KNLLD 722 (855)
Q Consensus 676 -------------------~-~~~t~ksDVwSfGvvl~elltG~~pf-~~~~~~~~~~~~----~~~--------~~~~d 722 (855)
+ ..++.++|||||||++|+|+||..|| ............ +.. ....+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 1 22788999999999999999887664 433322211110 000 00000
Q ss_pred ----------CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 ----------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ----------~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..........+..+.+|+.+||+.||.+||++ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 281 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA-EEAL 281 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCH-HHHh
Confidence 00001112345788999999999999999999 6654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=322.06 Aligned_cols=213 Identities=20% Similarity=0.263 Sum_probs=178.4
Q ss_pred cCCccccceeeccCceEEEEEEECC--eEEEEEEecCC---CCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH---SLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~L 598 (855)
..+|...+.||+|+||.||+|.... ..||||+++.. .......+..|..+|..+ +||||+++++++. +..||
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 4679999999999999999999874 67999999754 223456788999999988 7999999999984 46899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.+|++||+|||+..
T Consensus 99 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 99999999999999643 358999999999999999999999 899999999999999999999999998532
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChh
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.++|||||||++|||++|++||...+..... +..+ ...+|..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~---------~~~~p~~ 243 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH---------NVAYPKS 243 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---------CCCCCTT
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC---------CCCCCCC
Confidence 234678899999999999999999999766543221 1111 1234555
Q ss_pred hHHHHHHHHHHhhccCCCCCCCh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+..+.+|+.+||..||.+||+.
T Consensus 244 ~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 244 MSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp SCHHHHHHHHHHTCSCTTSCTTC
T ss_pred CCHHHHHHHHHHhhcCHHHcCCC
Confidence 66889999999999999999974
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=320.55 Aligned_cols=220 Identities=28% Similarity=0.373 Sum_probs=177.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~ 600 (855)
..|...+.||+|+||.||+|... +..||||++....... ...|.+|+.+|.+++|||||+++++| .+..+|||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45888999999999999999874 6889999997654332 24688999999999999999999998 35688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+. |+|.+++... ..++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9997 6888887432 3468999999999999999999999 799999999999999999999999998431
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
.+.++.++|||||||++|||+||++||.............. .. .+. ..+...+..+
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~--~~-~~~--~~~~~~~~~l 282 (348)
T 1u5q_A 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NE-SPA--LQSGHWSEYF 282 (348)
T ss_dssp CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SC-CCC--CCCTTSCHHH
T ss_pred CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cC-CCC--CCCCCCCHHH
Confidence 35678899999999999999999999976554332221110 00 110 1122334678
Q ss_pred HHHHHHhhccCCCCCCChHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+|+.+||+.||.+||++ .+++
T Consensus 283 ~~li~~~l~~dP~~Rps~-~~ll 304 (348)
T 1u5q_A 283 RNFVDSCLQKIPQDRPTS-EVLL 304 (348)
T ss_dssp HHHHHHHTCSSGGGSCCH-HHHT
T ss_pred HHHHHHHcccChhhCcCH-HHHh
Confidence 999999999999999999 6654
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=311.82 Aligned_cols=217 Identities=23% Similarity=0.330 Sum_probs=175.2
Q ss_pred CCcccc-ceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~-~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+.|.+. +.||+|+||.||+|... +..||||++..........+.+|+.+|.++ +||||+++++++. +..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456664 67999999999999875 688999999876655677899999999995 7999999999983 56899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc---EEEeecccccc--
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV---SKLSDFEFLAS-- 676 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---~KL~DFg~~~~-- 676 (855)
|+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++. +||+|||+...
T Consensus 92 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 92 KMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred cCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999999643 358999999999999999999999 79999999999999988766 99999985321
Q ss_pred -----------------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchH--------------
Q 003033 677 -----------------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKE-------------- 707 (855)
Q Consensus 677 -----------------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-------------- 707 (855)
..++.++|||||||++|+|+||++||.....
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 2256789999999999999999999965321
Q ss_pred ---HHHHHhhcccccccCCCCCCCCh----hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 708 ---VQYALDTGKLKNLLDPLAGDWPF----VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 708 ---~~~~~~~~~~~~~~d~~~~~~p~----~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
....+..+. ..+|. ..+..+.+|+.+||..||.+||++ .++++
T Consensus 246 ~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-~e~l~ 295 (316)
T 2ac3_A 246 QNMLFESIQEGK---------YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA-AQVLQ 295 (316)
T ss_dssp HHHHHHHHHHCC---------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred HHHHHHHHhccC---------cccCchhcccCCHHHHHHHHHHhhCChhhCCCH-HHHhc
Confidence 111111111 11222 235679999999999999999999 66643
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=312.40 Aligned_cols=225 Identities=28% Similarity=0.401 Sum_probs=175.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-----CChhhHHHHHHHHHhcC---CCcceeEeceecC--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-----QGPSEFQQEIDILSKIR---HPNLVTLVGACPE-- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-----~~~~~f~~Ei~iL~~l~---HpnIV~l~g~~~~-- 594 (855)
+++|...++||+|+||.||+|... +..||||++..... .....+.+|+.++.+++ ||||++++++|..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 568999999999999999999864 68899999875322 12356788999888775 9999999999832
Q ss_pred -----ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 595 -----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 595 -----~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
..++||||+. |+|.+++.... ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence 3689999996 69999986432 3459999999999999999999999 799999999999999999999999
Q ss_pred ecccc------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 670 DFEFL------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 670 DFg~~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
|||+. ....++.++|||||||++|+|++|++||............-.... .+..
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~ 240 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG--LPPE 240 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHC--CCCT
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC--CCCh
Confidence 99843 134578899999999999999999999976655433221110000 0001
Q ss_pred CCCC----------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 GDWP----------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 ~~~p----------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..|+ ...+..+.+|+.+||+.||.+||++ .+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 295 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA-FRAL 295 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCH-HHHh
Confidence 1111 1245789999999999999999999 5553
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=309.99 Aligned_cols=220 Identities=23% Similarity=0.361 Sum_probs=182.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec------------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------------ 593 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------------ 593 (855)
.+|...+.||+|+||.||+|... +..||||.+... ...+.+|+.++.+++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 46888999999999999999986 689999999753 357889999999999999999999873
Q ss_pred ------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 594 ------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 594 ------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
...++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEE
Confidence 23689999999999999996432 3468999999999999999999999 7999999999999999999999
Q ss_pred Eeeccccc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 003033 668 LSDFEFLA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 723 (855)
Q Consensus 668 L~DFg~~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~ 723 (855)
|+|||+.. ...++.++|||||||++|+|++|..|+.........+..+
T Consensus 163 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~-------- 234 (284)
T 2a19_B 163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG-------- 234 (284)
T ss_dssp ECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTT--------
T ss_pred ECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcc--------
Confidence 99998431 2346789999999999999999998874322222222211
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.++...+..+.+|+.+||..||.+||++ .++++.|..+..
T Consensus 235 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~-~e~l~~l~~~~~ 274 (284)
T 2a19_B 235 ---IISDIFDKKEKTLLQKLLSKKPEDRPNT-SEILRTLTVWKK 274 (284)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHTC
T ss_pred ---cccccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHhh
Confidence 1223344678999999999999999999 889999988744
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=313.72 Aligned_cols=234 Identities=26% Similarity=0.384 Sum_probs=185.7
Q ss_pred ccccchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEece
Q 003033 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA 591 (855)
Q Consensus 515 ~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~ 591 (855)
...+.+.++....++|...+.||+|+||.||+|... +..||||++.... .....+.+|+.++.++ +||||++++++
T Consensus 11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp -----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred chhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 345667778888899999999999999999999984 6889999997543 3457899999999999 79999999999
Q ss_pred ec--------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC
Q 003033 592 CP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663 (855)
Q Consensus 592 ~~--------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 663 (855)
+. +..++||||+++|+|.+++... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.+
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTEN 165 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTT
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCC
Confidence 82 3578999999999999999643 23468999999999999999999999 799999999999999999
Q ss_pred CcEEEeeccccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh
Q 003033 664 FVSKLSDFEFLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD 713 (855)
Q Consensus 664 ~~~KL~DFg~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~ 713 (855)
+.+||+|||+.. ...++.++|||||||++|+|+||.+||...........
T Consensus 166 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245 (326)
T ss_dssp CCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred CCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 999999997421 23467889999999999999999999976554432221
Q ss_pred hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 714 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 714 ~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... . +.....+...+..+.+|+.+||..||.+||++ .+++
T Consensus 246 ~~~--~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll 285 (326)
T 2x7f_A 246 IPR--N---PAPRLKSKKWSKKFQSFIESCLVKNHSQRPAT-EQLM 285 (326)
T ss_dssp HHH--S---CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCH-HHHH
T ss_pred hhc--C---ccccCCccccCHHHHHHHHHHhccChhhCCCH-HHHh
Confidence 110 0 00011122334789999999999999999999 5654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=312.65 Aligned_cols=229 Identities=18% Similarity=0.227 Sum_probs=182.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEecee--cCceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||++....... ...|.+|+.++.+++||||+++++++ .+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999876 6889999997653322 35688999999999999999999998 3568899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
|||+++++|.+++... .++++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 113 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999999999643 468999999999999999999999 79999999999999999999999999742
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
....++.++|||||||++|+|+||++||............. .... ....++...+
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~-~~~~~~~~~~ 262 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN---QAIP-RPSTVRPGIP 262 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH---SCCC-CGGGTSTTCC
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc---cCCC-CccccCCCCC
Confidence 12345778999999999999999999998765432111111 1010 1111233345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
..+.+|+.+||..||.+||+.+++++..|+.+
T Consensus 263 ~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 263 VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 67999999999999999994448999988876
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=329.20 Aligned_cols=225 Identities=23% Similarity=0.263 Sum_probs=180.2
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
+....++|...+.||+|+||.||+|... +..||||++... .......+.+|+.+|..++|||||+++++|. +.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 4445678999999999999999999986 578999999652 2233456889999999999999999999994 46
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.|||||||+||+|.+++.. ..+++..+..++.||+.||.|||+ ++||||||||+||||+.+|++||+|||++.
T Consensus 144 ~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 8899999999999999853 248899999999999999999999 899999999999999999999999998541
Q ss_pred --------------------------cCC----CCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc-cccCCC
Q 003033 676 --------------------------SGE----LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK-NLLDPL 724 (855)
Q Consensus 676 --------------------------~~~----~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~-~~~d~~ 724 (855)
... ++.++|||||||++|||+||++||...+............ ...-+.
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 296 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC
Confidence 011 5678999999999999999999998665443222111100 010111
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 003033 725 AGDWPFVQAEQLANLAMRCCEMSRKS--RPELGKDVW 759 (855)
Q Consensus 725 ~~~~p~~~~~~l~~L~~~Cl~~dP~~--RPs~~~evl 759 (855)
+...+..+.+|+.+||..+|.+ ||++ ++|+
T Consensus 297 ----~~~~s~~~~~li~~lL~~~~~rlgR~~~-~ei~ 328 (410)
T 3v8s_A 297 ----DNDISKEAKNLICAFLTDREVRLGRNGV-EEIK 328 (410)
T ss_dssp ----TCCCCHHHHHHHHHHSSCGGGCTTSSCH-HHHH
T ss_pred ----cccccHHHHHHHHHHccChhhhCCCCCH-HHHh
Confidence 1134578999999999999988 9998 6664
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=305.32 Aligned_cols=216 Identities=25% Similarity=0.399 Sum_probs=180.2
Q ss_pred CCccccceeeccCceEEEEEEECC--eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
++|...+.||+|+||.||+|...+ ..||+|++..........|.+|+.+|.+++||||++++++|. +..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 468889999999999999999874 679999998766666788999999999999999999999984 3578999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeeccccc-----
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFLA----- 675 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~~----- 675 (855)
++|+|.+++... ..+++..+..|+.|++.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 89 TGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 999999988543 458999999999999999999999 899999999999999 788999999998542
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCCh----h
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPF----V 731 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~----~ 731 (855)
.+.++.++|||||||++|+|+||++||......... +..+.. .+|. .
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 233 (277)
T 3f3z_A 163 KMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF---------TFPEKDWLN 233 (277)
T ss_dssp SCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---------CCCHHHHTT
T ss_pred cchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC---------CCCchhhhc
Confidence 123678999999999999999999999765543322 222211 1121 2
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+..+.+|+.+||+.||.+||++ .+++
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~s~-~~~l 260 (277)
T 3f3z_A 234 VSPQAESLIRRLLTKSPKQRITS-LQAL 260 (277)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCH-HHHT
T ss_pred CCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 35789999999999999999999 5553
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=317.90 Aligned_cols=223 Identities=26% Similarity=0.390 Sum_probs=175.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|...++||+|+||.||+|... +..||||++...... ....+.+|+.+|++++||||+++++++. +..+|||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46889999999999999999986 678999999754322 2335668999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
++ |+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 82 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 97 6899988543 3468999999999999999999999 899999999999999999999999997421
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC-------
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP------- 729 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p------- 729 (855)
...++.++|||||||++|+|+||++||............... ...+....|+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI--LGTPTEETWPGILSNEE 233 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH--HCCCCTTTSTTGGGCHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH--hCCCChHhchhhhcchh
Confidence 245788999999999999999999999876543322111100 0011111121
Q ss_pred ------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 ------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||+.||.+||++ .+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 280 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA-EDAM 280 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCH-HHHT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCH-HHHh
Confidence 1234678999999999999999999 6653
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=310.64 Aligned_cols=225 Identities=27% Similarity=0.372 Sum_probs=178.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|...++||+|+||.||+|... +..||||++....... ...+.+|+.++.+++||||++++++|. +..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999986 6889999987653322 356789999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++++|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 9999999998743 3458999999999999999999999 899999999999999999999999998431
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc------------------c
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------------L 717 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~------------------~ 717 (855)
...++.++|||||||++|+|+||++||.............. +
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 24578899999999999999999999976654332211100 0
Q ss_pred ccccCCCCCCC-C-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 KNLLDPLAGDW-P-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ~~~~d~~~~~~-p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.....+..... + ...+..+.+|+.+||+.||.+||++ ++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 283 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTC-EQLL 283 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCH-HHHH
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCH-HHHh
Confidence 00000000000 0 1245679999999999999999999 6664
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=326.93 Aligned_cols=220 Identities=22% Similarity=0.307 Sum_probs=171.5
Q ss_pred ccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecCCCC
Q 003033 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
..+.||+|+||.||+|... +..||||+++.........|.+|+.+|.+++|||||+++++|. +..+|||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3567999999999999885 6889999998765445678999999999999999999999984 46889999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee--CCCCcEEEeeccccc----------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL--DANFVSKLSDFEFLA---------- 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl--d~~~~~KL~DFg~~~---------- 675 (855)
|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 173 L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 173 LFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp EHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 99988532 3458999999999999999999999 899999999999999 677899999998532
Q ss_pred --------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHH
Q 003033 676 --------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741 (855)
Q Consensus 676 --------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~ 741 (855)
...++.++|||||||++|+|+||++||.............. ...+.....| ...+..+.+|+.
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~--~~~~~~~~~~-~~~~~~~~~li~ 324 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA--CRWDLEDEEF-QDISEEAKEFIS 324 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--TCCCSCSGGG-TTSCHHHHHHHH
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCCCChhhh-ccCCHHHHHHHH
Confidence 23467789999999999999999999976654432211100 0001111111 134578999999
Q ss_pred HhhccCCCCCCChHHHHHH
Q 003033 742 RCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 742 ~Cl~~dP~~RPs~~~evl~ 760 (855)
+||..||.+||++ .++++
T Consensus 325 ~~L~~dp~~Rps~-~e~l~ 342 (373)
T 2x4f_A 325 KLLIKEKSWRISA-SEALK 342 (373)
T ss_dssp TTSCSSGGGSCCH-HHHHH
T ss_pred HHcCCChhhCCCH-HHHhc
Confidence 9999999999999 66654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=309.04 Aligned_cols=224 Identities=25% Similarity=0.387 Sum_probs=181.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEecee----cCceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~----~~~~~L 598 (855)
.++|...+.||+|+||.||++... +..||+|.+...... ....|.+|+.++++++||||++++++| ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457889999999999999999986 688999999865432 245688999999999999999999987 235789
Q ss_pred EEEecCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----ceecccccCceeeCCCCcEEEeecc
Q 003033 599 VYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHS-----IVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~-----IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
||||+++|+|.+++.... ....+++..+..|+.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999985422 23459999999999999999999999 56 9999999999999999999999997
Q ss_pred cc-------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCC
Q 003033 673 FL-------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLA 725 (855)
Q Consensus 673 ~~-------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~ 725 (855)
+. ....++.++|||||||++|+|+||++||....... ..+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-------- 233 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-------- 233 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--------
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc--------
Confidence 42 12356889999999999999999999997655432 22222221
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 762 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L 762 (855)
...|...+..+.+|+.+||..||.+||++ .++++.+
T Consensus 234 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~-~~ll~~~ 269 (279)
T 2w5a_A 234 RRIPYRYSDELNEIITRMLNLKDYHRPSV-EEILENP 269 (279)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHTST
T ss_pred ccCCcccCHHHHHHHHHHcCCCcccCCCH-HHHHhCh
Confidence 12333455789999999999999999999 6775533
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=307.36 Aligned_cols=219 Identities=21% Similarity=0.301 Sum_probs=176.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhc-CCCcceeEecee--cCceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l-~HpnIV~l~g~~--~~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.++..+ +||||+++++++ .+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46888999999999999999986 689999999865333 245688999999999 899999999998 45688999
Q ss_pred EecCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-----------------
Q 003033 601 EYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----------------- 662 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~----------------- 662 (855)
||+++|+|.+++.... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 9999999999995431 12468999999999999999999999 89999999999999984
Q ss_pred --CCcEEEeeccccc----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc
Q 003033 663 --NFVSKLSDFEFLA----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 718 (855)
Q Consensus 663 --~~~~KL~DFg~~~----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~ 718 (855)
.+.+||+|||... ...++.++|||||||++|+|++|.+|+........ +..+..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~- 245 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE-IRQGRL- 245 (289)
T ss_dssp --CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH-HHTTCC-
T ss_pred CCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH-HHcCCC-
Confidence 4479999998432 12345689999999999999999988765544332 222221
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...|...+..+.+|+.+||+.||.+||++ .+++
T Consensus 246 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~~ll 278 (289)
T 1x8b_A 246 -------PRIPQVLSQEFTELLKVMIHPDPERRPSA-MALV 278 (289)
T ss_dssp -------CCCSSCCCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred -------CCCCcccCHHHHHHHHHHhCCCcccCCCH-HHHh
Confidence 22333455789999999999999999999 5553
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=317.40 Aligned_cols=225 Identities=26% Similarity=0.345 Sum_probs=171.9
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-----ChhhHHHHHHHHHhcCCCcceeEeceec--Cce
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
..++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|..++||||++++++|. +..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4567999999999999999999886 678999999754321 1346889999999999999999999984 468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA- 675 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~- 675 (855)
++||||+++ +|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 88 ~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 999999975 89888853 33468889999999999999999999 899999999999999999999999998532
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC--
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW-- 728 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~-- 728 (855)
...++.++|||||||++|+|++|.+||............- .....+....|
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF--ETLGTPTEEQWPD 239 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HHHCCCCTTTSSS
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH--HHcCCCChhhhhh
Confidence 1236778999999999999999999998765443222110 00000111111
Q ss_pred ----------------C-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 ----------------P-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 ----------------p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
| ...+..+.+|+.+||..||.+||++ .+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 290 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA-TQAL 290 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH-HHHH
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCH-HHHh
Confidence 1 2234789999999999999999999 6654
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=316.34 Aligned_cols=224 Identities=25% Similarity=0.397 Sum_probs=173.4
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
..++|...++||+|+||.||+|... +..||||++...... ....+.+|+.+|++++||||+++++++. +..+||
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4467999999999999999999875 688999999765332 2456789999999999999999999983 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee-----CCCCcEEEeecccc
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-----DANFVSKLSDFEFL 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl-----d~~~~~KL~DFg~~ 674 (855)
|||++ |+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+.
T Consensus 112 ~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99997 5999998533 458999999999999999999999 799999999999999 45567999999732
Q ss_pred -------------------------c-cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 675 -------------------------A-SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 -------------------------~-~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
. ...++.++|||||||++|+|++|++||.................. +....|
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~ 262 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGL--PDDTTW 262 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC--CCTTTS
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCC--Cchhhh
Confidence 1 234788999999999999999999999876654433221111000 000011
Q ss_pred C-------------------------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 P-------------------------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p-------------------------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+ ...+..+.+|+.+||+.||.+||++ .+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 317 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISA-KNAL 317 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCH-HHHh
Confidence 1 1134788999999999999999999 5553
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=318.82 Aligned_cols=222 Identities=24% Similarity=0.345 Sum_probs=176.4
Q ss_pred cccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCC--CcceeEeceec--CceE
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRH--PNLVTLVGACP--EVWT 597 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~H--pnIV~l~g~~~--~~~~ 597 (855)
...+.|...+.||+|+||.||++... +..||||++....... ...|.+|+.+|.+++| |||+++++++. +..+
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 34567999999999999999999876 5789999997654322 3568899999999986 99999999984 4678
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
||||| .+|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++ ++.+||+|||+..
T Consensus 86 lv~e~-~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEECC-CSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEeC-CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99995 588999999643 468999999999999999999999 7999999999999997 6789999998431
Q ss_pred ------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc
Q 003033 676 ------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 719 (855)
Q Consensus 676 ------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~ 719 (855)
...++.++|||||||++|+|++|++||.........+ ..
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~ 232 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL-----HA 232 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-----HH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH-----HH
Confidence 1446778999999999999999999996532211111 11
Q ss_pred ccC-CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 720 LLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 720 ~~d-~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.++ .....+|...+..+.+|+.+||+.||.+||++ .++++
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~-~e~l~ 273 (343)
T 3dbq_A 233 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-PELLA 273 (343)
T ss_dssp HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-HHHHT
T ss_pred HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCH-HHHHh
Confidence 111 12234555556789999999999999999999 66643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=313.98 Aligned_cols=222 Identities=22% Similarity=0.302 Sum_probs=179.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
++|...+.||+|+||.||+|... +..||||++...... ....|.+|+.+|.+++||||+++++++. +..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 46889999999999999999986 678999999765332 2467999999999999999999999984 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC----cEEEeeccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFEF 673 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~~KL~DFg~ 673 (855)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 99999999999999953 3468999999999999999999999 7999999999999999887 799999984
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.. ...++.++|||||||++|+|+||.+||...................+ ...+
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~ 242 (321)
T 2a2a_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD---EEFF 242 (321)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC---HHHH
T ss_pred ceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccC---hhhh
Confidence 31 24578899999999999999999999976554332221111100000 0011
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||..||.+||++ .+++
T Consensus 243 ~~~~~~~~~li~~~l~~dp~~Rps~-~e~l 271 (321)
T 2a2a_A 243 SHTSELAKDFIRKLLVKETRKRLTI-QEAL 271 (321)
T ss_dssp TTCCHHHHHHHHTTSCSSTTTSCCH-HHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 2234679999999999999999999 6664
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=315.66 Aligned_cols=217 Identities=24% Similarity=0.281 Sum_probs=172.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..++||+|+||.||+|.+. +..||||++....... ...+..|+..+.++ +||||++++++|. +..+|||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56899999999999999999986 6889999987543322 23455677666666 8999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+ +|+|.+++... ...++|..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++.
T Consensus 137 e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp ECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred ecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 999 77999988543 3469999999999999999999999 799999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+.++.++|||||||++|||++|.+|+........ +..+.. ...++...+..+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~l~ 282 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ-LRQGYL-------PPEFTAGLSSELR 282 (311)
T ss_dssp ----CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH-HTTTCC-------CHHHHTTSCHHHH
T ss_pred CCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH-HhccCC-------CcccccCCCHHHH
Confidence 23578899999999999999999766654433322 222111 1112223457899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||+.||.+||++ .+++
T Consensus 283 ~li~~~L~~dP~~Rpt~-~ell 303 (311)
T 3p1a_A 283 SVLVMMLEPDPKLRATA-EALL 303 (311)
T ss_dssp HHHHHHSCSSTTTSCCH-HHHH
T ss_pred HHHHHHcCCChhhCcCH-HHHH
Confidence 99999999999999999 6654
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=322.84 Aligned_cols=223 Identities=23% Similarity=0.285 Sum_probs=174.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
..++|...+.||+|+||.||++... +..||||++.... .....+.+|+.+++.++|||||++++++. +..+||||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 4568999999999999999999986 6789999997643 23567899999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc--EEEeeccccc----
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--SKLSDFEFLA---- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--~KL~DFg~~~---- 675 (855)
|+++|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++. +||+|||+..
T Consensus 97 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 97 YASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred eCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999998543 358999999999999999999999 89999999999999987765 9999998532
Q ss_pred --------------------cCCCCcc-hhHHHHHHHHHHHHhCCCCCCCchHH---HHHHhhcccccccCCCCCCCChh
Q 003033 676 --------------------SGELTPK-SDVYSFGIILLRLLTGRPALGITKEV---QYALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 --------------------~~~~t~k-sDVwSfGvvl~elltG~~pf~~~~~~---~~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
...++.+ +|||||||++|+|++|++||...... ...+.. +... ......+..
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~ 246 (361)
T 3uc3_A 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR--ILSV--KYSIPDDIR 246 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH--HHTT--CCCCCTTSC
T ss_pred cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH--HhcC--CCCCCCcCC
Confidence 2233334 89999999999999999999753321 111110 0000 000001112
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+..+.+|+.+||..||.+||++ .++++
T Consensus 247 ~s~~~~~li~~~L~~dP~~Rps~-~ell~ 274 (361)
T 3uc3_A 247 ISPECCHLISRIFVADPATRISI-PEIKT 274 (361)
T ss_dssp CCHHHHHHHHHHSCSCTTTSCCH-HHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCH-HHHHh
Confidence 45789999999999999999999 66643
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=305.04 Aligned_cols=231 Identities=21% Similarity=0.306 Sum_probs=182.8
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee---cCceEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVY 600 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~---~~~~~LV~ 600 (855)
..++|...+.||+|+||.||+|... +..||||++.... ....+.+|+.++..++|++++..++.+ .+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 3568999999999999999999964 6899999987643 345789999999999999887777665 34678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeeccccc--
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFLA-- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~~-- 675 (855)
||+ +|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 85 e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp ECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred Eec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 999 99999999532 3469999999999999999999999 899999999999999 488999999998532
Q ss_pred ------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-----HHHHHhhcccccc
Q 003033 676 ------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-----VQYALDTGKLKNL 720 (855)
Q Consensus 676 ------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-----~~~~~~~~~~~~~ 720 (855)
...++.++|||||||++|+|+||++||..... ....+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 12356789999999999999999999974321 1111111111111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
...... ..+..+.+|+.+||+.||.+||++ .+|++.|+.+....
T Consensus 239 ~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 239 IEVLCK----GYPSEFATYLNFCRSLRFDDKPDY-SYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHTT----TSCHHHHHHHHHHHTSCTTCCCCH-HHHHHHHHHHHHHT
T ss_pred hHHHHh----hCCHHHHHHHHHHHhcCcCcCCCH-HHHHHHHHHHHHhc
Confidence 111112 234679999999999999999999 89999999986543
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=305.55 Aligned_cols=222 Identities=22% Similarity=0.392 Sum_probs=178.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.++|...+.||+|+||.||+|... +..||+|++...... ....+.+|+.++.+++||||+++++++. +..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999886 578999999765332 2356889999999999999999999984 3578999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc---EEEeecccc---
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV---SKLSDFEFL--- 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---~KL~DFg~~--- 674 (855)
||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++. +||+|||+.
T Consensus 85 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp CCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 999999999988543 458999999999999999999999 79999999999999976655 999999753
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChh
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~ 731 (855)
....++.++|||||||++|+|++|++||......... +..+... .....| ..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~-~~ 233 (284)
T 3kk8_A 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD----YPSPEW-DT 233 (284)
T ss_dssp CSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC----CCTTTT-TT
T ss_pred ccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc----CCchhh-cc
Confidence 2234678999999999999999999999765543322 2222111 111111 23
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+..+.+|+.+||+.||.+||++ .++++
T Consensus 234 ~~~~~~~li~~~l~~dp~~Rps~-~~~l~ 261 (284)
T 3kk8_A 234 VTPEAKSLIDSMLTVNPKKRITA-DQALK 261 (284)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCH-HHHTT
T ss_pred cCHHHHHHHHHHcccChhhCCCH-HHHhc
Confidence 45779999999999999999999 66643
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=305.88 Aligned_cols=230 Identities=21% Similarity=0.307 Sum_probs=179.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee---cCceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~---~~~~~LV~E 601 (855)
.++|...+.||+|+||.||+|... +..||||++.... ....+.+|+.++..++|+|++..++.| .+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 467999999999999999999964 6889999876543 235689999999999999888877766 346789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeeccccc---
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFLA--- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~~--- 675 (855)
|+ +|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp CC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred cc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 99 99999998532 3469999999999999999999999 899999999999999 788999999998532
Q ss_pred -----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-----HHHHHhhccccccc
Q 003033 676 -----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE-----VQYALDTGKLKNLL 721 (855)
Q Consensus 676 -----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-----~~~~~~~~~~~~~~ 721 (855)
...++.++|||||||++|+|++|++||..... .........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 12456789999999999999999999964321 11111111111110
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
..... ..+..+.+|+.+||+.||.+||++ +++++.|+.+....
T Consensus 240 ~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~-~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 240 EVLCK----GYPSEFATYLNFCRSLRFDDKPDY-SYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHTT----TSCHHHHHHHHHHHTSCTTCCCCH-HHHHHHHHHHHHHH
T ss_pred hhhhc----cCCHHHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHHHh
Confidence 11111 224689999999999999999999 89999999986543
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=307.64 Aligned_cols=220 Identities=27% Similarity=0.389 Sum_probs=181.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
...|...+.||+|+||.||+|... +..||||++..... .....+.+|+.++..++||||+++++++. +..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356899999999999999999875 67899999976543 34577999999999999999999999983 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
|+++|+|.+++.. .++++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 101 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred eCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 9999999999842 468999999999999999999999 799999999999999999999999997431
Q ss_pred -------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHH
Q 003033 676 -------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736 (855)
Q Consensus 676 -------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l 736 (855)
...++.++|||||||++|+|++|++||.............. ......+...+..+
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l 247 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK------NNPPTLEGNYSKPL 247 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH------SCCCCCCSSCCHHH
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc------CCCCCCccccCHHH
Confidence 23467899999999999999999999976554332211110 01112233445779
Q ss_pred HHHHHHhhccCCCCCCChHHHHHH
Q 003033 737 ANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 737 ~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+|+.+||..||.+||++ .++++
T Consensus 248 ~~li~~~l~~dp~~Rps~-~~ll~ 270 (303)
T 3a7i_A 248 KEFVEACLNKEPSFRPTA-KELLK 270 (303)
T ss_dssp HHHHHHHCCSSGGGSCCH-HHHTT
T ss_pred HHHHHHHcCCChhhCcCH-HHHhh
Confidence 999999999999999999 66643
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=322.61 Aligned_cols=231 Identities=20% Similarity=0.284 Sum_probs=172.9
Q ss_pred cCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-----------ChhhHHHHHHHHHhcCCCcceeEec
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-----------GPSEFQQEIDILSKIRHPNLVTLVG 590 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-----------~~~~f~~Ei~iL~~l~HpnIV~l~g 590 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.++..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999985 467999999765321 1234667889999999999999999
Q ss_pred eec------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC
Q 003033 591 ACP------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 664 (855)
Q Consensus 591 ~~~------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 664 (855)
++. ...+|||||+ +|+|.+++.... .+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCC
Confidence 873 3578999999 999999995432 69999999999999999999999 7999999999999998877
Q ss_pred --cEEEeeccccc--------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCc--hHH
Q 003033 665 --VSKLSDFEFLA--------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGIT--KEV 708 (855)
Q Consensus 665 --~~KL~DFg~~~--------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~--~~~ 708 (855)
.+||+|||+.. +..++.++|||||||++|+|+||++||... ...
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 99999998641 123678999999999999999999999531 111
Q ss_pred HHHHhhcccccccCCCCCCC--ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 709 QYALDTGKLKNLLDPLAGDW--PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 709 ~~~~~~~~~~~~~d~~~~~~--p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
........+...+......+ +...+..+.+|+.+||..||.+||++ ++|++.|+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~L~~~ 326 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNY-QALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCH-HHHHHHHCTT
T ss_pred HHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCH-HHHHHHHhcc
Confidence 11111111111111000000 01344689999999999999999999 8999999875
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=305.53 Aligned_cols=220 Identities=24% Similarity=0.388 Sum_probs=175.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.++.+++||||+++++++. +..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 457889999999999999999874 6889999996532 223467899999999999999999999984 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++.. ...++++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999953 33568999999999999999999999 799999999999999999999999997432
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|++|++||......... . .... ....+|...+.
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~-----~~~~-~~~~~~~~~~~ 237 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-N-----KVVL-ADYEMPSFLSI 237 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCS-SCCCCCTTSCH
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-H-----HHhh-cccCCccccCH
Confidence 233567899999999999999999999754321111 0 0110 11123445567
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.+|+.+||..||.+||++ .+++
T Consensus 238 ~~~~li~~~l~~dp~~Rps~-~~~l 261 (278)
T 3cok_A 238 EAKDLIHQLLRRNPADRLSL-SSVL 261 (278)
T ss_dssp HHHHHHHHHSCSSGGGSCCH-HHHT
T ss_pred HHHHHHHHHcccCHhhCCCH-HHHh
Confidence 89999999999999999999 5553
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=331.27 Aligned_cols=229 Identities=21% Similarity=0.217 Sum_probs=179.6
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP-- 593 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-- 593 (855)
.++....++|...+.||+|+||.||++... +..||||++++.. ......+.+|+.+|..++||||++++++|.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344455678999999999999999999986 6889999997531 122346889999999999999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
+..||||||+++|+|.++|.... ..+++..+..++.||+.||.|||+ ++||||||||+||||+.++++||+|||+
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechh
Confidence 46889999999999999996432 368999999999999999999999 8999999999999999999999999984
Q ss_pred cc---------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc
Q 003033 674 LA---------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 720 (855)
Q Consensus 674 ~~---------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~ 720 (855)
.. .+.++.++|||||||++|||++|++||...+..............
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 288 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH 288 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence 31 124678899999999999999999999766544322211111000
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCC---ChHHHH
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP---ELGKDV 758 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RP---s~~~ev 758 (855)
+. .+.++...+..+.+|+.+||. +|.+|+ ++ +++
T Consensus 289 ~~--~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~-~ei 325 (412)
T 2vd5_A 289 LS--LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGA-GDF 325 (412)
T ss_dssp CC--CC----CCCHHHHHHHHTTSS-CGGGCTTTTTH-HHH
T ss_pred cC--CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCH-HHH
Confidence 00 011123345789999999999 999984 66 555
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=307.49 Aligned_cols=220 Identities=21% Similarity=0.369 Sum_probs=174.4
Q ss_pred CCcccc-ceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHH-HhcCCCcceeEeceec------CceE
Q 003033 528 HNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDIL-SKIRHPNLVTLVGACP------EVWT 597 (855)
Q Consensus 528 ~~f~~~-~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL-~~l~HpnIV~l~g~~~------~~~~ 597 (855)
++|... +.||+|+||.||++... +..||||++.. ...+.+|+.++ +.++||||+++++++. ...+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 467776 67999999999999885 57899999963 35788999998 5568999999999873 2478
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeecccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEFL 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~~ 674 (855)
|||||+++|+|.+++... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+.
T Consensus 92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 999999999999999653 23469999999999999999999999 89999999999999998 789999999975
Q ss_pred ---ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC----hhhHHHHHHHHHHhhccC
Q 003033 675 ---ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP----FVQAEQLANLAMRCCEMS 747 (855)
Q Consensus 675 ---~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p----~~~~~~l~~L~~~Cl~~d 747 (855)
....++.++|||||||++|+|+||++||......... . .....+......+| ...+..+.+|+.+||+.|
T Consensus 168 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 244 (299)
T 3m2w_A 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--P-GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 244 (299)
T ss_dssp EECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------C-CSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred cccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--H-HHHHHHhhccccCCchhcccCCHHHHHHHHHHcccC
Confidence 4567899999999999999999999999754432211 0 01111111111223 234578999999999999
Q ss_pred CCCCCChHHHHHH
Q 003033 748 RKSRPELGKDVWR 760 (855)
Q Consensus 748 P~~RPs~~~evl~ 760 (855)
|.+||++ .++++
T Consensus 245 P~~Rps~-~e~l~ 256 (299)
T 3m2w_A 245 PTQRMTI-TEFMN 256 (299)
T ss_dssp TTTSCCH-HHHHT
T ss_pred hhhCCCH-HHHhc
Confidence 9999999 66643
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=334.21 Aligned_cols=220 Identities=21% Similarity=0.254 Sum_probs=171.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...++||+|+||.||+|... +..||||++... .......+.+|+.+|..++||||++++++|. +..+||
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356889999999999999999876 578999999753 2233456889999999999999999999984 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+. ++||||||||+||||+.++.+||+|||++.
T Consensus 227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999998543 4689999999999999999999962 489999999999999999999999998532
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||+||||++|++||............. . ....+|...+.
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--~-----~~~~~p~~~~~ 374 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--M-----EEIRFPRTLGP 374 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--H-----CCCCCCTTSCH
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH--h-----CCCCCCccCCH
Confidence 3457889999999999999999999997655432211110 0 01124445567
Q ss_pred HHHHHHHHhhccCCCCCC-----ChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRP-----ELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RP-----s~~~evl 759 (855)
.+.+|+.+||..||.+|| ++ ++++
T Consensus 375 ~~~~li~~~L~~dP~~R~~~~~~t~-~ell 403 (446)
T 4ejn_A 375 EAKSLLSGLLKKDPKQRLGGGSEDA-KEIM 403 (446)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTH-HHHH
T ss_pred HHHHHHHHHcccCHHHhCCCCCCCH-HHHH
Confidence 899999999999999999 66 5553
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=329.27 Aligned_cols=221 Identities=23% Similarity=0.377 Sum_probs=173.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--------CCChhhHHHHHHHHHhcCCCcceeEeceec-Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--------LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--------~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~ 595 (855)
.++|...+.||+|+||.||+|... +..||||++.... ......|.+|+.+|++++|||||++++++. +.
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 213 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 213 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence 357888999999999999999886 4789999987532 112345889999999999999999999984 46
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC---CcEEEeecc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFE 672 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~~KL~DFg 672 (855)
.+|||||+++|+|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.+ +.+||+|||
T Consensus 214 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp EEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred eEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecc
Confidence 7899999999999998843 3569999999999999999999999 799999999999999654 459999997
Q ss_pred ccc---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH---HHHHHhhcccccccC
Q 003033 673 FLA---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE---VQYALDTGKLKNLLD 722 (855)
Q Consensus 673 ~~~---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~---~~~~~~~~~~~~~~d 722 (855)
+.. ...++.++|||||||++|+|+||++||..... ....+..+..... .
T Consensus 288 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~-~ 366 (419)
T 3i6u_A 288 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI-P 366 (419)
T ss_dssp TTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCC-H
T ss_pred cceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCC-c
Confidence 431 13456789999999999999999999964321 2222222221100 0
Q ss_pred CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
......+..+.+|+.+||+.||.+||++ .+++
T Consensus 367 ----~~~~~~~~~~~~li~~~L~~dP~~Rps~-~e~l 398 (419)
T 3i6u_A 367 ----EVWAEVSEKALDLVKKLLVVDPKARFTT-EEAL 398 (419)
T ss_dssp ----HHHTTSCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred ----hhhcccCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 0001235789999999999999999999 5554
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=317.42 Aligned_cols=214 Identities=22% Similarity=0.376 Sum_probs=176.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--------ChhhHHHHHHHHHhcCCCcceeEeceec--C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------GPSEFQQEIDILSKIRHPNLVTLVGACP--E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~ 594 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....|.+|+.+|++++||||++++++|. +
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 457899999999999999999875 688999999875422 2346889999999999999999999984 4
Q ss_pred ceEEEEEecCCC-CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 VWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 ~~~LV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..++||||+.+| +|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 578999999777 99999853 3469999999999999999999999 7999999999999999999999999985
Q ss_pred cc------------------------cCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 674 LA------------------------SGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 674 ~~------------------------~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
.. ...+ +.++|||||||++|+|++|++||...... ... ....
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------~~~-~~~~ 243 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------VEA-AIHP 243 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------TTT-CCCC
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------Hhh-ccCC
Confidence 32 1223 67899999999999999999999642211 110 1112
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
|...+..+.+|+.+||..||.+||++ .++++
T Consensus 244 ~~~~~~~l~~li~~~L~~dP~~Rps~-~ell~ 274 (335)
T 3dls_A 244 PYLVSKELMSLVSGLLQPVPERRTTL-EKLVT 274 (335)
T ss_dssp SSCCCHHHHHHHHHHTCSSGGGSCCH-HHHHH
T ss_pred CcccCHHHHHHHHHHccCChhhCcCH-HHHhc
Confidence 33355789999999999999999999 66643
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=313.44 Aligned_cols=230 Identities=23% Similarity=0.383 Sum_probs=183.3
Q ss_pred ccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--Cc
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~ 595 (855)
...+|...+.||+|+||.||+|.+. +..||||.+..... .....|.+|+.++.+++||||+++++++. +.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 4468999999999999999999843 45799999975422 22456889999999999999999999984 36
Q ss_pred eEEEEEecCCCCHHHHhcccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEE
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKL 668 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL 668 (855)
.+|||||+++|+|.+++..... ...+++..++.++.||+.||.|||+ ++|+||||||+|||++. ++.+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 7999999999999999965332 1458999999999999999999999 79999999999999984 456999
Q ss_pred eecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccc
Q 003033 669 SDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLK 718 (855)
Q Consensus 669 ~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~ 718 (855)
+|||+. ....++.++|||||||++|+|+| |.+||........ .+..+.
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-- 262 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-- 262 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC--
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC--
Confidence 999732 13457889999999999999998 9999976543321 111111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 719 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 719 ~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
....+...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 263 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll~~l~~~~~ 304 (327)
T 2yfx_A 263 ------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNF-AIILERIEYCTQ 304 (327)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHhcCChhhCcCH-HHHHHHHHHHhc
Confidence 112233455789999999999999999999 889999988744
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=314.09 Aligned_cols=235 Identities=21% Similarity=0.361 Sum_probs=186.9
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP-- 593 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-- 593 (855)
....++....++|...+.||+|+||.||+|.+.+ .||||+++.... .....|.+|+.++.+++||||+++++++.
T Consensus 23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred cccccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 3445556667889999999999999999999876 499999976432 23467889999999999999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
+..++||||+++|+|.+++.. ....+++..+..++.||+.||.|||+ ++|+||||||+|||++ ++.+||+|||+
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred CceEEEeecccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCC
Confidence 468899999999999999953 23468999999999999999999999 7999999999999998 68999999984
Q ss_pred cc---------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--H
Q 003033 674 LA---------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--L 712 (855)
Q Consensus 674 ~~---------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~ 712 (855)
.. ...++.++|||||||++|+|+||+.||......... +
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 255 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence 21 123678899999999999999999999765443222 1
Q ss_pred hhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 713 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 713 ~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..+.. +.. .+...+..+.+|+.+||..||.+||++ .++++.|+.+..
T Consensus 256 ~~~~~-----~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~l~~~l~~l~~ 302 (319)
T 2y4i_B 256 GTGMK-----PNL--SQIGMGKEISDILLFCWAFEQEERPTF-TKLMDMLEKLPK 302 (319)
T ss_dssp HTTCC-----CCC--CCSSCCTTHHHHHHHHHCSSTTTSCCH-HHHHHHHTTC--
T ss_pred ccCCC-----CCC--CcCCCCHHHHHHHHHHhcCChhhCcCH-HHHHHHHHHHHH
Confidence 12111 110 011234568999999999999999999 899999998744
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=306.59 Aligned_cols=223 Identities=24% Similarity=0.335 Sum_probs=179.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
++|...+.||+|+||.||+|... +..||||++...... ....|.+|+.+|.+++||||+++++++. +..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 35888999999999999999986 688999999765322 2567999999999999999999999984 4678
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC----cEEEeeccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFEF 673 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~~KL~DFg~ 673 (855)
+||||+++++|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999532 468999999999999999999999 7999999999999998877 899999974
Q ss_pred cc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 674 LA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.. ...++.++||||||+++|+|++|.+||...................+ ...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 235 (283)
T 3bhy_A 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD---EEYF 235 (283)
T ss_dssp CEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC---HHHH
T ss_pred ceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCc---chhc
Confidence 32 24577899999999999999999999976554332211111100000 0011
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...+..+.+|+.+||..||.+||++ .+++.
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rps~-~~~l~ 265 (283)
T 3bhy_A 236 SNTSELAKDFIRRLLVKDPKRRMTI-AQSLE 265 (283)
T ss_dssp TTCCHHHHHHHHTTSCSSGGGSCCH-HHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCH-HHHHh
Confidence 1234679999999999999999999 66654
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=317.74 Aligned_cols=211 Identities=24% Similarity=0.354 Sum_probs=166.5
Q ss_pred cceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceec--CceEEEEEecCCCC
Q 003033 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLPNGS 607 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV~Ey~~~Gs 607 (855)
.+.||+|+||.||+|... +..||||++... ....+.+|+.+|..+. ||||++++++|. ...+|||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 367999999999999986 688999999743 3467889999999997 999999999984 35889999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC---cEEEeeccccc---------
Q 003033 608 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFEFLA--------- 675 (855)
Q Consensus 608 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~~KL~DFg~~~--------- 675 (855)
|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||+..
T Consensus 93 L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 93 LFERIKKK---KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 99999543 469999999999999999999999 8999999999999997665 89999998532
Q ss_pred ----------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH---------HHHHhhcccccccCCCCCCCCh
Q 003033 676 ----------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV---------QYALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 ----------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~---------~~~~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++|||||||++|+|++|++||...... ...+..+.+ ........
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~ 241 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF-----SFEGEAWK 241 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-----CCCSHHHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-----CCCccccc
Confidence 234688999999999999999999999754321 111111111 00000012
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
..+..+.+|+.+||..||.+||++ .++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~-~el 268 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKM-SGL 268 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCT-TTS
T ss_pred CCCHHHHHHHHHHCCCChhHCCCH-HHH
Confidence 345789999999999999999999 444
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=327.25 Aligned_cols=221 Identities=12% Similarity=0.149 Sum_probs=169.0
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHH---HHHHhcCCCcceeEecee---
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEI---DILSKIRHPNLVTLVGAC--- 592 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei---~iL~~l~HpnIV~l~g~~--- 592 (855)
....++|...+.||+|+||.||+|.+. +..||||++..... ...+.|.+|+ .+|++++|||||++++.|
T Consensus 69 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~ 148 (377)
T 3byv_A 69 GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 148 (377)
T ss_dssp SCCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCC
T ss_pred CCCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhh
Confidence 344568999999999999999999864 68999999985422 2346788999 455566899999998433
Q ss_pred ----cC-------------------ceEEEEEecCCCCHHHHhcccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003033 593 ----PE-------------------VWTLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKP 645 (855)
Q Consensus 593 ----~~-------------------~~~LV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~ 645 (855)
.+ ..+|||||+ +|+|.+++..... ...+++..+..|+.||+.||.|||+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--- 224 (377)
T 3byv_A 149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--- 224 (377)
T ss_dssp SEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred hhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---
Confidence 21 278999999 6899999964221 1235568889999999999999999
Q ss_pred CCceecccccCceeeCCCCcEEEeeccccc---------------------cC-----------CCCcchhHHHHHHHHH
Q 003033 646 HSIVHGDLKPANILLDANFVSKLSDFEFLA---------------------SG-----------ELTPKSDVYSFGIILL 693 (855)
Q Consensus 646 ~~IvHrDLKp~NILld~~~~~KL~DFg~~~---------------------~~-----------~~t~ksDVwSfGvvl~ 693 (855)
++|+||||||+|||++.++.+||+|||+.. .. .++.++|||||||+||
T Consensus 225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 799999999999999999999999998642 12 5888999999999999
Q ss_pred HHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 694 RLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 694 elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
||+||++||....... ....+.. ... ..+..+.+|+.+||+.||.+||++ .++++
T Consensus 305 elltg~~Pf~~~~~~~------~~~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~-~e~l~ 359 (377)
T 3byv_A 305 WIWCADLPITKDAALG------GSEWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLP-LQAME 359 (377)
T ss_dssp HHHHSSCCC------C------CSGGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCH-HHHHT
T ss_pred HHHHCCCCCccccccc------chhhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCH-HHHhh
Confidence 9999999996433211 1111111 112 234779999999999999999999 66653
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=308.60 Aligned_cols=221 Identities=25% Similarity=0.365 Sum_probs=175.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
.++|...+.||+|+||.||+|... +..||||.+.... ....+.+|+.+|.+++||||+++++++ .+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 457899999999999999999987 6889999997643 457899999999999999999999988 3467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++... ...+++..+..++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 106 ~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 106 CGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 9999999998532 3468999999999999999999999 899999999999999999999999997431
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
...++.++|||||||++|+|++|.+||............... . +.....+...+..+.
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~ 256 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN---P-PPTFRKPELWSDNFT 256 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS---C-CCCCSSGGGSCHHHH
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC---C-CcccCCcccCCHHHH
Confidence 234678899999999999999999999765544332211100 0 011112333457899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||..||.+||++ .+++
T Consensus 257 ~li~~~l~~dp~~Rpt~-~~ll 277 (314)
T 3com_A 257 DFVKQCLVKSPEQRATA-TQLL 277 (314)
T ss_dssp HHHHHHTCSCTTTSCCH-HHHT
T ss_pred HHHHHHccCChhhCcCH-HHHH
Confidence 99999999999999999 5553
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=318.11 Aligned_cols=232 Identities=19% Similarity=0.252 Sum_probs=180.9
Q ss_pred cCCccccceeeccCceEEEEEEEC----------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCccee---------
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR----------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT--------- 587 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~----------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~--------- 587 (855)
.++|...+.||+|+||.||+|... +..||||++... ..+.+|+.++.+++|||||+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 367999999999999999999875 467999999753 47899999999999999998
Q ss_pred ------Eecee---cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCce
Q 003033 588 ------LVGAC---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658 (855)
Q Consensus 588 ------l~g~~---~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NI 658 (855)
+++++ ....+|||||+ +|+|.+++... ....+++..+..|+.||+.||.|||+ ++|+||||||+||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NI 190 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENI 190 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHE
Confidence 34444 24678999999 99999999643 13569999999999999999999999 7999999999999
Q ss_pred eeCCCC--cEEEeeccccc--------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 003033 659 LLDANF--VSKLSDFEFLA--------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGI 704 (855)
Q Consensus 659 Lld~~~--~~KL~DFg~~~--------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~ 704 (855)
|++.++ .+||+|||+.. +..++.++|||||||+||+|+||+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 99999998541 12467789999999999999999999975
Q ss_pred ch-HHHHHH-hhcccccccCCCCCCC--ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhcC
Q 003033 705 TK-EVQYAL-DTGKLKNLLDPLAGDW--PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 769 (855)
Q Consensus 705 ~~-~~~~~~-~~~~~~~~~d~~~~~~--p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~~ 769 (855)
.. ...... ....+..........+ ....+..+.+|+.+||..||.+||++ +++++.|+.+....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPY-AMLRNNLEALLQDL 338 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCH-HHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCH-HHHHHHHHHHHHhc
Confidence 42 111111 1111111111111111 01235789999999999999999999 89999999986543
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-34 Score=317.26 Aligned_cols=230 Identities=16% Similarity=0.203 Sum_probs=185.1
Q ss_pred hhhhcccCCccccceeeccCceEEEEEE-------ECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC---CCcceeEec
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGL-------LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR---HPNLVTLVG 590 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~-------~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~---HpnIV~l~g 590 (855)
.++....++|...+.||+|+||.||+|. ..+..||||++... ....+.+|+.++..++ |+||+.+++
T Consensus 58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 3455667889999999999999999994 23578999999753 4668899999999997 999999999
Q ss_pred ee--cCceEEEEEecCCCCHHHHhcccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC----
Q 003033 591 AC--PEVWTLVYEYLPNGSLEDRLSCKD--NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---- 662 (855)
Q Consensus 591 ~~--~~~~~LV~Ey~~~GsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---- 662 (855)
++ .+..+||||||++|+|.+++.... ....+++..+..|+.||+.||.|||+ ++||||||||+||||+.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTC
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccC
Confidence 98 457899999999999999995321 34569999999999999999999999 79999999999999998
Q ss_pred -------CCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH
Q 003033 663 -------NFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV 708 (855)
Q Consensus 663 -------~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~ 708 (855)
++.+||+|||+. .+..++.++|||||||++|||+||++||.....
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~- 290 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG- 290 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET-
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC-
Confidence 899999999854 123468899999999999999999999843211
Q ss_pred HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 709 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 709 ~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
+.. .+.......+ ....+.+++.+|++.+|.+||+..+++.+.|+.+..
T Consensus 291 ------~~~--~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 291 ------GEC--KPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ------TEE--EECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ------Cce--eechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 110 1111111112 356788999999999999997766888888887643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=306.35 Aligned_cols=219 Identities=22% Similarity=0.381 Sum_probs=180.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.++..++||||+++++++. +..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999986 5789999986531 223467899999999999999999999984 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999998543 358999999999999999999999 79999999999999999999999999843
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
....++.++|||||||++|+|++|.+||.............. ....+|...+..+.
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 240 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN-------VDLKFPPFLSDGSK 240 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-------TCCCCCTTSCHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc-------cccCCCCcCCHHHH
Confidence 123467899999999999999999999976554332111100 11124445567899
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+|+.+||..||.+||++ .++++
T Consensus 241 ~li~~~l~~~p~~Rps~-~~ll~ 262 (284)
T 2vgo_A 241 DLISKLLRYHPPQRLPL-KGVME 262 (284)
T ss_dssp HHHHHHSCSSGGGSCCH-HHHHT
T ss_pred HHHHHHhhcCHhhCCCH-HHHhh
Confidence 99999999999999999 66643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=306.91 Aligned_cols=220 Identities=24% Similarity=0.330 Sum_probs=177.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
++|...+.||+|+||.||++... +..||||++..........+.+|+.+|.+++||||+++++++. +..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 46888999999999999999986 6889999998765445567899999999999999999999984 4678999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeecccc------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFL------ 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~------ 674 (855)
++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+.
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 89 SGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999998543 358999999999999999999999 799999999999999 78899999999743
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
....++.++|||||||++|+|++|.+||........ .+..+.. ......+...+..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~ 237 (304)
T 2jam_A 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY-----EFESPFWDDISES 237 (304)
T ss_dssp TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC-----CCCTTTTTTSCHH
T ss_pred ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccccCCHH
Confidence 234577899999999999999999999976543322 2222211 1111222344578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|+.+||..||.+||++ .+++
T Consensus 238 ~~~li~~~l~~dp~~Rps~-~~~l 260 (304)
T 2jam_A 238 AKDFICHLLEKDPNERYTC-EKAL 260 (304)
T ss_dssp HHHHHHHHHCSSTTTSCCH-HHHH
T ss_pred HHHHHHHHcCCChhHCcCH-HHHh
Confidence 9999999999999999999 5654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=316.65 Aligned_cols=233 Identities=21% Similarity=0.280 Sum_probs=180.3
Q ss_pred hhhhhcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCC-----------hhhHHHHHHHHHhcCCCccee
Q 003033 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG-----------PSEFQQEIDILSKIRHPNLVT 587 (855)
Q Consensus 520 ~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~-----------~~~f~~Ei~iL~~l~HpnIV~ 587 (855)
+.++....++|...+.||+|+||.||+|... +..||||++....... ...|.+|+.+|.+++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 3455566788999999999999999999775 6889999997543322 157899999999999999999
Q ss_pred Eecee-----cC--ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 588 LVGAC-----PE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 588 l~g~~-----~~--~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
++++| .. ..+|||||+. |+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||+
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILL 167 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEE
Confidence 99987 21 4689999997 688888853 33569999999999999999999999 799999999999999
Q ss_pred CCCCcEEEeeccccc-------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhc
Q 003033 661 DANFVSKLSDFEFLA-------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 715 (855)
Q Consensus 661 d~~~~~KL~DFg~~~-------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~ 715 (855)
+.++.+||+|||+.. ...++.++|||||||++|+|++|++||.............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999997431 1457889999999999999999999997655332211110
Q ss_pred c-----------------cccccCCC-----CCCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 716 K-----------------LKNLLDPL-----AGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 716 ~-----------------~~~~~d~~-----~~~~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. ....+... ...| +...+..+.+|+.+||+.||.+||++ .+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 315 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST-EQAL 315 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH-HHHH
Confidence 0 00000000 0011 11234679999999999999999999 5553
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=314.24 Aligned_cols=220 Identities=24% Similarity=0.373 Sum_probs=173.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--------CChhhHHHHHHHHHhcCCCcceeEeceec-Cce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--------QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--------~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~ 596 (855)
++|...+.||+|+||.||+|... +..||||++..... .....|.+|+.+|.+++||||+++++++. +..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 89 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY 89 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence 46889999999999999999886 57899999975422 12346889999999999999999999984 458
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc---EEEeeccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV---SKLSDFEF 673 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---~KL~DFg~ 673 (855)
++||||+++|+|.+++.. ...+++.....++.||+.||.|||+ ++|+||||||+|||++.++. +||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred EEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 999999999999999843 3568999999999999999999999 79999999999999987654 99999974
Q ss_pred cc---------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH---HHHHHhhcccccccCC
Q 003033 674 LA---------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE---VQYALDTGKLKNLLDP 723 (855)
Q Consensus 674 ~~---------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~---~~~~~~~~~~~~~~d~ 723 (855)
.. ...++.++|||||||++|+|++|.+||..... ....+..+.... .
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~-- 240 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-I-- 240 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC-C--
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc-C--
Confidence 31 34577899999999999999999999964321 222222222110 0
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+...+..+.+|+.+||..||.+||++ .+++
T Consensus 241 --~~~~~~~~~~~~~li~~~l~~dP~~Rps~-~~~l 273 (322)
T 2ycf_A 241 --PEVWAEVSEKALDLVKKLLVVDPKARFTT-EEAL 273 (322)
T ss_dssp --HHHHTTSCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred --chhhhhcCHHHHHHHHHHcccCHhhCCCH-HHHh
Confidence 00011235789999999999999999999 5664
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=329.63 Aligned_cols=224 Identities=19% Similarity=0.255 Sum_probs=174.9
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
..++|...++||+|+||.||+|... +..||||++..... .....+.+|+.+|+.++|||||++++++..
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999876 68899999975421 224568899999999999999999999832
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..||||||+.+ +|.+.+. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 35899999975 5766663 238999999999999999999999 7999999999999999999999999984
Q ss_pred c------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------------
Q 003033 674 L------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------ 717 (855)
Q Consensus 674 ~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~------------ 717 (855)
. .+..|+.++|||||||+||||++|++||.+.+........-..
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 3 2345788999999999999999999999876544322111000
Q ss_pred ----ccccCC----CCCCC----C-----------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 ----KNLLDP----LAGDW----P-----------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ----~~~~d~----~~~~~----p-----------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.. ....+ | ...+..+.+|+.+||..||.+|||+ ++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta-~e~L 354 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-DDAL 354 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCH-HHHh
Confidence 000000 00000 0 1125679999999999999999999 6654
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=327.00 Aligned_cols=172 Identities=24% Similarity=0.352 Sum_probs=139.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-------Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-------EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------~~ 595 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|.+++|||||+++++|. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999876 578999999754322 2456889999999999999999999982 24
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.||||||+ +|+|.+++.. ...+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEecc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccch
Confidence 79999998 5799999853 3469999999999999999999999 799999999999999999999999998542
Q ss_pred -----------------------------------------------------cCCCCcchhHHHHHHHHHHHHh-----
Q 003033 676 -----------------------------------------------------SGELTPKSDVYSFGIILLRLLT----- 697 (855)
Q Consensus 676 -----------------------------------------------------~~~~t~ksDVwSfGvvl~ellt----- 697 (855)
...++.++|||||||+||||+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 2347788999999999999999
Q ss_pred ------CCCCCCCc
Q 003033 698 ------GRPALGIT 705 (855)
Q Consensus 698 ------G~~pf~~~ 705 (855)
|+++|.+.
T Consensus 285 ~~~~~~~~p~f~g~ 298 (458)
T 3rp9_A 285 VAYHADRGPLFPGS 298 (458)
T ss_dssp CSSGGGCCCSCC--
T ss_pred ccccccccccCCCC
Confidence 77777543
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=305.69 Aligned_cols=220 Identities=23% Similarity=0.390 Sum_probs=174.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec------CceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP------EVWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~~~~L 598 (855)
.|.....||+|+||.||+|... +..||+|.+...... ....|.+|+.+|++++||||++++++|. ...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677788999999999999886 477999998754322 2456889999999999999999999873 23789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecccccCceeeC-CCCcEEEeeccccc
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLD-ANFVSKLSDFEFLA 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--IvHrDLKp~NILld-~~~~~KL~DFg~~~ 675 (855)
||||+++|+|.+++... ..+++..+..|+.||+.||.|||+ ++ |+||||||+|||++ .++.+||+|||+..
T Consensus 107 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 99999999999999543 458999999999999999999999 56 99999999999997 78999999997431
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
.+.++.++|||||||++|+|++|++||.............. ....+ ..++...+
T Consensus 181 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~--~~~~~~~~ 256 (290)
T 1t4h_A 181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT--SGVKP--ASFDKVAI 256 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT--TTCCC--GGGGGCCC
T ss_pred cccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh--ccCCc--cccCCCCC
Confidence 23467899999999999999999999976443322221110 00011 11222334
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.+|+.+||+.||.+||++ .+++
T Consensus 257 ~~l~~li~~~l~~dp~~Rps~-~ell 281 (290)
T 1t4h_A 257 PEVKEIIEGCIRQNKDERYSI-KDLL 281 (290)
T ss_dssp HHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred HHHHHHHHHHccCChhhCCCH-HHHh
Confidence 679999999999999999999 6654
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=323.67 Aligned_cols=215 Identities=23% Similarity=0.293 Sum_probs=169.9
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHH-HHhcCCCcceeEeceec--CceE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDI-LSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~i-L~~l~HpnIV~l~g~~~--~~~~ 597 (855)
..++|...+.||+|+||.||+|... +..||||+++.... .....+.+|..+ ++.++|||||+++++|. +..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467999999999999999999986 47899999976532 223456778777 56789999999999984 4689
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
|||||+++|+|.+++... ..+++.....++.||+.||.|||+ ++|+||||||+|||++.+|++||+|||+..
T Consensus 116 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999999543 358899999999999999999999 899999999999999999999999998532
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCCh
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~ 730 (855)
...++.++|||||||++|||++|.+||...+..... +..+. ..+|.
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------~~~~~ 260 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP---------LQLKP 260 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC---------CCCCS
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc---------cCCCC
Confidence 234678999999999999999999999766543321 11111 12344
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELG 755 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~ 755 (855)
..+..+.+|+.+||..||.+||++.
T Consensus 261 ~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 261 NITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp SSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred CCCHHHHHHHHHHcccCHHhCCCCC
Confidence 4567899999999999999999984
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=305.93 Aligned_cols=226 Identities=21% Similarity=0.270 Sum_probs=169.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-h-hhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-P-SEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-~-~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
..++|...+.||+|+||.||+|... +..||||++....... . ..+..+...++.++||||+++++++. +..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3467999999999999999999984 6899999997643221 1 22444555578889999999999984 468999
Q ss_pred EEecCCCCHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeCCCCcEEEeecccc---
Q 003033 600 YEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
|||++ |+|.+++.. ......+++..+..|+.||+.||.|||+ + +|+||||||+|||++.++.+||+|||+.
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 588887743 1234579999999999999999999999 6 8999999999999999999999999742
Q ss_pred -------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 675 -------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 675 -------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
....++.++|||||||++|+|+||++||.........+... ... ......+
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~---~~~~~~~ 236 (290)
T 3fme_A 161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEE---PSPQLPA 236 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH-HHS---CCCCCCT
T ss_pred cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH-hcc---CCCCccc
Confidence 23456789999999999999999999997532211111110 000 0001111
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...+..+.+|+.+||+.||.+||++ .++++
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~-~e~l~ 266 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTY-PELMQ 266 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCH-HHHTT
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCH-HHHHh
Confidence 2345779999999999999999999 66643
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=309.30 Aligned_cols=229 Identities=24% Similarity=0.374 Sum_probs=177.1
Q ss_pred cCCccccceeeccCceEEEEEEEC---C--eEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec-CceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR---H--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~---~--~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~ 597 (855)
.++|...+.||+|+||.||+|.+. + ..||||+++..... ....|.+|+.++.+++||||+++++++. +..+
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK 96 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence 457899999999999999999863 2 36999999765322 2457889999999999999999999984 4588
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
+||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 97 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 999999999999998643 2458999999999999999999999 799999999999999999999999998532
Q ss_pred --------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 676 --------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 --------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|+|++ |++||............... ......
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~ 246 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE-----GERLPR 246 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS-----CCCCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc-----CCCCCC
Confidence 1224668999999999999999 99999765543322111100 011122
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+...+..+.+|+.+||..||.+||++ .++++.|+.+.
T Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~-~~l~~~l~~~~ 283 (291)
T 1u46_A 247 PEDCPQDIYNVMVQCWAHKPEDRPTF-VALRDFLLEAQ 283 (291)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHC
T ss_pred CcCcCHHHHHHHHHHccCCcccCcCH-HHHHHHHHHhC
Confidence 33455789999999999999999999 88999998774
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=320.07 Aligned_cols=219 Identities=21% Similarity=0.384 Sum_probs=173.3
Q ss_pred cCCcccc-ceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHh-cCCCcceeEeceec------Cce
Q 003033 527 THNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSK-IRHPNLVTLVGACP------EVW 596 (855)
Q Consensus 527 ~~~f~~~-~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~-l~HpnIV~l~g~~~------~~~ 596 (855)
.++|... +.||+|+||.||+|... +..||||++.. ...+.+|+.++.+ .+||||++++++|. ...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 68999999999999986 57899999963 3568899999855 48999999999873 247
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeeccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEF 673 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~ 673 (855)
|||||||++|+|.+++... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+
T Consensus 135 ~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 8999999999999999643 23469999999999999999999999 79999999999999987 78999999974
Q ss_pred c------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH------HHHHHhhcccccccCC
Q 003033 674 L------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDTGKLKNLLDP 723 (855)
Q Consensus 674 ~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~------~~~~~~~~~~~~~~d~ 723 (855)
. ....++.++|||||||++|+|++|++||..... ....+..+.+. .
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~----~ 286 (400)
T 1nxk_A 211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE----F 286 (400)
T ss_dssp CEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC----C
T ss_pred ccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc----C
Confidence 3 235578899999999999999999999965432 22222222221 1
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 724 ~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
....| ...+..+.+|+.+||..||.+||++ .+++.
T Consensus 287 ~~~~~-~~~s~~~~~li~~~L~~dP~~Rpt~-~eil~ 321 (400)
T 1nxk_A 287 PNPEW-SEVSEEVKMLIRNLLKTEPTQRMTI-TEFMN 321 (400)
T ss_dssp CTTTT-TTSCHHHHHHHHTTSCSSGGGSCCH-HHHHH
T ss_pred CCccc-ccCCHHHHHHHHHHCCCChhHCcCH-HHHhc
Confidence 11122 2345789999999999999999999 66654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=321.43 Aligned_cols=224 Identities=24% Similarity=0.350 Sum_probs=168.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcC-CCcceeEeceec--C--ceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIR-HPNLVTLVGACP--E--VWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~--~~~ 597 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|..+. |||||++++++. + ..|
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 457999999999999999999886 688999998654222 2456789999999997 999999999983 2 579
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA-- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~-- 675 (855)
||||||+ |+|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 88 lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 9999997 689998853 358999999999999999999999 899999999999999999999999998642
Q ss_pred ---------------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH
Q 003033 676 ---------------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY 710 (855)
Q Consensus 676 ---------------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~ 710 (855)
...++.++|||||||++|||++|++||...+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 14578899999999999999999999987655433
Q ss_pred HHhhcccccccC----------------------------CCCCCC------------ChhhHHHHHHHHHHhhccCCCC
Q 003033 711 ALDTGKLKNLLD----------------------------PLAGDW------------PFVQAEQLANLAMRCCEMSRKS 750 (855)
Q Consensus 711 ~~~~~~~~~~~d----------------------------~~~~~~------------p~~~~~~l~~L~~~Cl~~dP~~ 750 (855)
....-....... .....+ +...+..+.+|+.+||..||.+
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 221100000000 000000 0123467999999999999999
Q ss_pred CCChHHHHH
Q 003033 751 RPELGKDVW 759 (855)
Q Consensus 751 RPs~~~evl 759 (855)
|||+ .+++
T Consensus 320 R~t~-~e~l 327 (388)
T 3oz6_A 320 RISA-NDAL 327 (388)
T ss_dssp SCCH-HHHT
T ss_pred CCCH-HHHh
Confidence 9998 5553
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=317.15 Aligned_cols=226 Identities=19% Similarity=0.275 Sum_probs=173.2
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
...+|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|+.++||||+++++++..
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4568999999999999999999985 688999999654322 23568899999999999999999999842
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..||||||+ +++|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeec
Confidence 358999999 8899999853 358999999999999999999999 8999999999999999999999999984
Q ss_pred cc-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----ccc---------
Q 003033 674 LA-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GKL--------- 717 (855)
Q Consensus 674 ~~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~~--------- 717 (855)
.. ...++.++|||||||++|+|++|++||...+........ +..
T Consensus 175 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 175 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp CEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred ccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 31 145788999999999999999999999876554322111 000
Q ss_pred --------cccc---CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 718 --------KNLL---DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 718 --------~~~~---d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+. ......+....+..+.+|+.+||..||.+||++ .+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~-~e~l~ 307 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA-GEALA 307 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCH-HHHhc
Confidence 0000 000011122345789999999999999999999 66543
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=313.08 Aligned_cols=227 Identities=22% Similarity=0.367 Sum_probs=182.0
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHh--cCCCcceeEeceecC------ceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACPE------VWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~--l~HpnIV~l~g~~~~------~~~L 598 (855)
.++|...+.||+|+||.||+|.+.+..||||++... ....+.+|++++.. ++||||+++++++.. ..++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l 117 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 117 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred cccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence 457999999999999999999999999999999643 34678899999988 789999999999832 5789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecccccCceeeCCCCcEEEee
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH--------SCKPHSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH--------~~~~~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
||||+++|+|.+++.. ..+++..+..++.||+.||.||| + ++|+||||||+|||++.++.+||+|
T Consensus 118 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~D 190 (342)
T 1b6c_B 118 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIAD 190 (342)
T ss_dssp EECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECC
T ss_pred EEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEE
Confidence 9999999999999953 25899999999999999999999 5 7999999999999999999999999
Q ss_pred cccccc-----------------------------C------CCCcchhHHHHHHHHHHHHhC----------CCCCCCc
Q 003033 671 FEFLAS-----------------------------G------ELTPKSDVYSFGIILLRLLTG----------RPALGIT 705 (855)
Q Consensus 671 Fg~~~~-----------------------------~------~~t~ksDVwSfGvvl~elltG----------~~pf~~~ 705 (855)
||+... . .++.++|||||||++|+|+|| ..||...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 985310 0 112579999999999999999 6777532
Q ss_pred h-------HHHHHHhhcccccccCC-CCCCC-ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 706 K-------EVQYALDTGKLKNLLDP-LAGDW-PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 706 ~-------~~~~~~~~~~~~~~~d~-~~~~~-p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
. .....+... ...+ ....| +...+..+.+|+.+||+.||.+||++ .+|++.|+.+...
T Consensus 271 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 271 VPSDPSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQLSQQ 337 (342)
T ss_dssp SCSSCCHHHHHHHHTTS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCH-HHHHHHHHHHHHT
T ss_pred CcCcccHHHHHHHHHHH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCH-HHHHHHHHHHHHH
Confidence 1 111111111 1111 11111 12456789999999999999999999 8999999988553
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=330.67 Aligned_cols=218 Identities=26% Similarity=0.377 Sum_probs=179.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.+|+.++||||+++++++. +..+||
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357899999999999999999986 6889999997532 233567899999999999999999999984 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 95 ~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999999953 3469999999999999999999999 899999999999999999999999998532
Q ss_pred --------------------cCC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhh
Q 003033 676 --------------------SGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 --------------------~~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
+.. .+.++|||||||++|+|++|++||........ .+..+. ...|...
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------~~~p~~~ 239 (476)
T 2y94_A 169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI---------FYTPQYL 239 (476)
T ss_dssp TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC---------CCCCTTC
T ss_pred cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC---------cCCCccC
Confidence 112 25789999999999999999999976543322 112211 1223345
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+..+.+|+.+||..||.+||++ .++++
T Consensus 240 s~~~~~Li~~~L~~dP~~Rpt~-~eil~ 266 (476)
T 2y94_A 240 NPSVISLLKHMLQVDPMKRATI-KDIRE 266 (476)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCH-HHHHT
T ss_pred CHHHHHHHHHHcCCCchhCcCH-HHHHh
Confidence 5789999999999999999999 66654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=320.54 Aligned_cols=217 Identities=24% Similarity=0.404 Sum_probs=172.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.++|...+.||+|+||.||+|... +..||||++..... .+.+|+++|.++ +||||+++++++. +..|||||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 346888999999999999999986 68899999976432 356799999988 7999999999984 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC----CcEEEeecccccc-
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN----FVSKLSDFEFLAS- 676 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~----~~~KL~DFg~~~~- 676 (855)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||+..+ +.+||+|||+...
T Consensus 97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999853 3468999999999999999999999 899999999999998432 4599999986421
Q ss_pred ------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHhhcccccccCCCCCC
Q 003033 677 ------------------------GELTPKSDVYSFGIILLRLLTGRPALGITK-----EVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 677 ------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~-----~~~~~~~~~~~~~~~d~~~~~ 727 (855)
..++.++|||||||++|+|++|.+||.... .....+..+.+. ....
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-----~~~~ 245 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS-----LSGG 245 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC-----CCST
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc-----cCcc
Confidence 114567999999999999999999997421 122222232221 1112
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
++...+..+.+|+.+||..||.+||++ .+++
T Consensus 246 ~~~~~s~~~~~li~~~L~~dP~~R~t~-~~il 276 (342)
T 2qr7_A 246 YWNSVSDTAKDLVSKMLHVDPHQRLTA-ALVL 276 (342)
T ss_dssp TTTTSCHHHHHHHHHHTCSSTTTSCCH-HHHT
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 223456789999999999999999999 5553
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=313.47 Aligned_cols=224 Identities=25% Similarity=0.378 Sum_probs=176.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC--------
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------- 594 (855)
.++|...++||+|+||.||+|... +..||||++...... ....+.+|+.+|..++||||++++++|..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 357999999999999999999985 688999998765332 24578899999999999999999998832
Q ss_pred --ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 595 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 595 --~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
..+|||||++ |+|.+.+.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccC-CCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccch
Confidence 4789999997 477777743 33469999999999999999999999 799999999999999999999999998
Q ss_pred ccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccC
Q 003033 673 FLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 722 (855)
Q Consensus 673 ~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d 722 (855)
+.. ...++.++|||||||++|+|+||++||....................
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 431 13468899999999999999999999987654332221111111011
Q ss_pred CCCCCCChh---------------------------hHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 PLAGDWPFV---------------------------QAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ~~~~~~p~~---------------------------~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...|+.. .+..+.+|+.+||..||.+||++ ++++
T Consensus 250 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 310 (351)
T 3mi9_A 250 --PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS-DDAL 310 (351)
T ss_dssp --TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred --hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCH-HHHh
Confidence 0111110 13568899999999999999999 5553
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=307.77 Aligned_cols=221 Identities=19% Similarity=0.336 Sum_probs=174.0
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceecC----ceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE----VWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~----~~~L 598 (855)
..++|...++||+|+||.||+|... +..||||++.. .....+.+|+.+|.+++ ||||+++++++.+ ..++
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 3467999999999999999999875 68899999974 34578999999999997 9999999999843 4789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeeccccc--
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFLA-- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~~-- 675 (855)
||||+++++|.+++. .+++..+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||+..
T Consensus 111 v~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999999883 37889999999999999999999 8999999999999999776 89999998532
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCch-HHHHH---------------Hhhcc
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITK-EVQYA---------------LDTGK 716 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~-~~~~~---------------~~~~~ 716 (855)
...++.++|||||||++|+|++|+.||.... ..... +....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 1457889999999999999999999984221 11110 00000
Q ss_pred cc------ccc---------CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 LK------NLL---------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ~~------~~~---------d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.. ... .......+...+..+.+|+.+||..||.+||++ .+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta-~e~l 318 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA-REAM 318 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCH-HHHh
Confidence 00 000 000111122246789999999999999999999 6654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=317.66 Aligned_cols=226 Identities=22% Similarity=0.351 Sum_probs=177.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
++|...+.||+|+||.||+|... +..||+|++...... ....+.+|+.+|.+++||||++++++| .+..+|||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46888999999999999999987 688999999865322 245688999999999999999999988 4468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
+++|+|.+++... ..+++..+..|+.+++.||.|||+. ++|+||||||+|||++.++.+||+|||+.
T Consensus 113 ~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 113 MDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred CCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 9999999999543 3589999999999999999999982 28999999999999999999999999843
Q ss_pred ---------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc----------------------
Q 003033 675 ---------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---------------------- 717 (855)
Q Consensus 675 ---------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~---------------------- 717 (855)
....++.++|||||||++|+|+||+.||...............
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 2345788999999999999999999999754432211110000
Q ss_pred --------------ccccCCCCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 --------------KNLLDPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 --------------~~~~d~~~~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+........+ ...+..+.+|+.+||..||.+||++ .+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 323 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL-KQLM 323 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCH-HHHH
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCH-HHHh
Confidence 000000001111 1245679999999999999999999 5654
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=321.69 Aligned_cols=221 Identities=25% Similarity=0.321 Sum_probs=175.8
Q ss_pred cCCccccceeeccCceEEEEEEE-----CCeEEEEEEecCCC----CCChhhHHHHHHHHHhc-CCCcceeEeceec--C
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~ 594 (855)
..+|...+.||+|+||.||++.. .+..||||+++... ......+.+|+.+|.++ +||||+++++++. +
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36899999999999999999988 46889999997532 23346688899999999 6999999999883 4
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..+|||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 688999999999999999643 358999999999999999999999 79999999999999999999999999843
Q ss_pred c----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCC
Q 003033 675 A----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPL 724 (855)
Q Consensus 675 ~----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~ 724 (855)
. ...++.++|||||||+||+|+||++||...... ...+..... ..
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-----~~ 281 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL-----KS 281 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH-----HC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh-----cc
Confidence 1 123577899999999999999999999643210 001111000 01
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 003033 725 AGDWPFVQAEQLANLAMRCCEMSRKSRP-----ELGKDVW 759 (855)
Q Consensus 725 ~~~~p~~~~~~l~~L~~~Cl~~dP~~RP-----s~~~evl 759 (855)
...+|...+..+.+|+.+||..||.+|| ++ ++++
T Consensus 282 ~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~-~ell 320 (355)
T 1vzo_A 282 EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDA-DEIK 320 (355)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTH-HHHH
T ss_pred CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCH-HHHH
Confidence 1234455567899999999999999999 65 5554
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=309.62 Aligned_cols=230 Identities=23% Similarity=0.302 Sum_probs=166.2
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 600 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~ 600 (855)
..++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.++.+++||||+++++++ .+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4568999999999999999999764 68899999875432 3356788999999999999999999988 35688999
Q ss_pred EecCCCCHHHHhccc-----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 601 EYLPNGSLEDRLSCK-----DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~-----~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
||+++|+|.+++... .....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998531 124568999999999999999999999 799999999999999999999999997421
Q ss_pred -------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccC
Q 003033 676 -------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLD 722 (855)
Q Consensus 676 -------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~--~~~~~~~~~d 722 (855)
...++.++|||||||++|+|+||++||.......... ..........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence 0246789999999999999999999997544322211 1111111100
Q ss_pred C-CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 723 P-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 723 ~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. .........+..+.+|+.+||+.||.+||++ .+++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~~ll 286 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA-AELL 286 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCH-HHHH
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 0 0111222345789999999999999999999 5554
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=305.40 Aligned_cols=219 Identities=20% Similarity=0.270 Sum_probs=179.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
..+|...+.||+|+||.||++... +..||+|++...... ....+.+|+.+++.++||||+++++++. +..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357889999999999999999987 578999998765332 2456889999999999999999999984 457899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|||+++++|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999988533 368999999999999999999999 799999999999999999999999998532
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...++.++|||||||++|+|+||++||............... ....|...+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 240 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHINP 240 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-------CCCCCTTSCH
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc-------cCCCccccCH
Confidence 223567899999999999999999999765543322111110 1123334457
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.+|+.+||+.||.+||++ .+++
T Consensus 241 ~~~~li~~~l~~~p~~Rps~-~~ll 264 (294)
T 2rku_A 241 VAASLIQKMLQTDPTARPTI-NELL 264 (294)
T ss_dssp HHHHHHHHHTCSSGGGSCCG-GGGG
T ss_pred HHHHHHHHHcccChhhCcCH-HHHh
Confidence 89999999999999999999 5554
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=325.58 Aligned_cols=227 Identities=14% Similarity=0.111 Sum_probs=159.7
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhc--CCCcceeEeceec-----
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKI--RHPNLVTLVGACP----- 593 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l--~HpnIV~l~g~~~----- 593 (855)
...+|...+.||+|+||.||+|.+. +..||||++....... ...+.+|+.++..| +||||++++..+.
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence 3456899999999999999999976 6889999998764322 34577886555555 6999888553221
Q ss_pred ---------------------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCC
Q 003033 594 ---------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTR------IRIATELCSVLIFLHSCKPH 646 (855)
Q Consensus 594 ---------------------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~------~~i~~qia~aL~yLH~~~~~ 646 (855)
...+||||||+ |+|.+++.... ..+++..+ ..++.||+.||.|||+ +
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 33789999998 89999996432 23455566 7888999999999999 8
Q ss_pred CceecccccCceeeCCCCcEEEeecccc----------------------cc--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 003033 647 SIVHGDLKPANILLDANFVSKLSDFEFL----------------------AS--GELTPKSDVYSFGIILLRLLTGRPAL 702 (855)
Q Consensus 647 ~IvHrDLKp~NILld~~~~~KL~DFg~~----------------------~~--~~~t~ksDVwSfGvvl~elltG~~pf 702 (855)
+||||||||+|||++.++.+||+|||+. .. ..++.++|||||||+||+|+||++||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999842 12 45788999999999999999999999
Q ss_pred CCchHHHHH-Hhhccccccc-CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 703 GITKEVQYA-LDTGKLKNLL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 703 ~~~~~~~~~-~~~~~~~~~~-d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
......... .......... .......+...+..+.+|+.+||+.||.+||++ .+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 351 (371)
T 3q60_A 294 GLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP-LEAM 351 (371)
T ss_dssp TBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH-HHHT
T ss_pred CCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH-HHHh
Confidence 654221000 0000000000 011111112456789999999999999999999 5553
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=301.65 Aligned_cols=217 Identities=25% Similarity=0.355 Sum_probs=175.3
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+++.++||||+++++++. +..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 46888999999999999999886 68899999975433 23567899999999999999999999984 467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||...
T Consensus 87 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999842 3468999999999999999999999 899999999999999999999999998532
Q ss_pred --------------------cCC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHH---HHHhhcccccccCCCCCCCChh
Q 003033 676 --------------------SGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQ---YALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 676 --------------------~~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~---~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
... ++.++|||||||++|+|++|+.||....... ..+.... . .... +..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~----~~~~-~~~ 233 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--T----YLNP-WKK 233 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC--T----TSTT-GGG
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc--c----ccCc-hhh
Confidence 112 2567999999999999999999997543211 1111110 0 0011 123
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+..+.+|+.+||..||.+||++ .++
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~-~~i 259 (276)
T 2yex_A 234 IDSAPLALLHKILVENPSARITI-PDI 259 (276)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCH-HHH
T ss_pred cCHHHHHHHHHHCCCCchhCCCH-HHH
Confidence 45779999999999999999999 555
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=327.52 Aligned_cols=220 Identities=27% Similarity=0.455 Sum_probs=175.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
+.|...++||+|+||.||+|... +..||||++.... ......+.+|+.+|+.++|||||+++++|. ...+||||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46999999999999999999986 5789999998653 234567999999999999999999999994 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeeccccc---
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEFLA--- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~~~--- 675 (855)
||++|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+..
T Consensus 117 ~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 117 CYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 99999999988543 458999999999999999999999 79999999999999976 4569999998531
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
.+.++.++|||||||++|+|++|.+||........ .+..+... .....|+ ..+
T Consensus 191 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~-~~s 265 (494)
T 3lij_A 191 NQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT----FDSPEWK-NVS 265 (494)
T ss_dssp TTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC----CCSGGGT-TSC
T ss_pred CCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----CCchhcc-cCC
Confidence 13467899999999999999999999987654332 22222211 1111222 345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.+|+.+||+.||.+||++ .+++
T Consensus 266 ~~~~~li~~~L~~dp~~R~s~-~e~l 290 (494)
T 3lij_A 266 EGAKDLIKQMLQFDSQRRISA-QQAL 290 (494)
T ss_dssp HHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred HHHHHHHHHHCCCChhhCccH-HHHh
Confidence 779999999999999999999 6665
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=332.83 Aligned_cols=215 Identities=23% Similarity=0.315 Sum_probs=178.3
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
..++|...+.||+|+||.||+|... +..||||++... .......+.+|+.+|..++|||||++++++. +..||
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 4467899999999999999999986 688999999653 2234567889999999999999999999984 46899
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||++||+|.+++.... ...+++..+..|+.||+.||.|||+ ++||||||||+||||+.+|++||+|||+..
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999986432 3459999999999999999999999 899999999999999999999999998532
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH------HHHHHhhcccccccCCCCCCC
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~------~~~~~~~~~~~~~~d~~~~~~ 728 (855)
...++.++|||||||++|||++|++||..... +...+.. ....+
T Consensus 338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~---------~~~~~ 408 (576)
T 2acx_A 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---------VPEEY 408 (576)
T ss_dssp TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH---------CCCCC
T ss_pred cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc---------ccccC
Confidence 23467889999999999999999999975421 1111111 12234
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCC
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs 753 (855)
|...+..+.+|+.+||..||.+||+
T Consensus 409 p~~~s~~~~dLI~~lL~~dP~~R~g 433 (576)
T 2acx_A 409 SERFSPQARSLCSQLLCKDPAERLG 433 (576)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred CccCCHHHHHHHHHhccCCHHHcCC
Confidence 5556688999999999999999994
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=318.31 Aligned_cols=219 Identities=25% Similarity=0.366 Sum_probs=173.5
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcC--CCcceeEecee--cCceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIR--HPNLVTLVGAC--PEVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~--HpnIV~l~g~~--~~~~~LV 599 (855)
..+|...+.||+|+||.||++... +..||||++...... ....|.+|+.+|.+++ |||||++++++ .+..+||
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 346999999999999999999876 578999999765432 2457899999999996 59999999987 4468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA---- 675 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~---- 675 (855)
|| +.+|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++ ++.+||+|||+..
T Consensus 135 ~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 5688999999643 368899999999999999999999 7999999999999996 5899999998432
Q ss_pred ----------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccccc
Q 003033 676 ----------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 676 ----------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
...++.++|||||||+||+|++|++||.........+ ..++
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~-----~~~~ 281 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL-----HAII 281 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-----HHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH-----HHHh
Confidence 0247788999999999999999999996532211111 1111
Q ss_pred CC-CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 722 DP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 722 d~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
++ ....+|...+..+.+|+.+||..||.+||++ .+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-~ell 319 (390)
T 2zmd_A 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-PELL 319 (390)
T ss_dssp CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred CccccCCCCccchHHHHHHHHHHcccChhhCCCH-HHHh
Confidence 11 1223344445789999999999999999999 6664
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=309.41 Aligned_cols=231 Identities=20% Similarity=0.259 Sum_probs=182.0
Q ss_pred hhhhcccCCcccc-ceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcC-CCcceeEeceec-
Q 003033 521 SEIEGATHNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIR-HPNLVTLVGACP- 593 (855)
Q Consensus 521 ~ei~~~~~~f~~~-~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~- 593 (855)
.....-.+.|... +.||+|+||.||+|... +..||||++..... .....+.+|+.++..+. ||||++++++|.
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3333344556666 78999999999999887 68999999976432 23567899999999995 699999999984
Q ss_pred -CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEe
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLS 669 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~ 669 (855)
+..++||||+++|+|.+++... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred CCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEe
Confidence 4688999999999999998532 33569999999999999999999999 79999999999999987 7899999
Q ss_pred ecccc------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 670 DFEFL------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 670 DFg~~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
|||+. ....++.++|||||||++|+|++|++||................ ....
T Consensus 177 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~---~~~~ 253 (327)
T 3lm5_A 177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN---VDYS 253 (327)
T ss_dssp CGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---CCCC
T ss_pred eCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc---cccC
Confidence 99743 23557889999999999999999999997665543322221111 1111
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+...+..+.+|+.+||..||.+||++ ++++
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~~ll 286 (327)
T 3lm5_A 254 EETFSSVSQLATDFIQSLLVKNPEKRPTA-EICL 286 (327)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCH-HHHT
T ss_pred chhhcccCHHHHHHHHHHcCCChhhCcCH-HHHh
Confidence 12223455789999999999999999999 5553
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=308.60 Aligned_cols=224 Identities=21% Similarity=0.315 Sum_probs=171.5
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-----------
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----------- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~----------- 593 (855)
.++|...+.||+|+||.||+|... +..||||++..........+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 457999999999999999999987 6889999997654444567899999999999999999998862
Q ss_pred -----CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-CCCcEE
Q 003033 594 -----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSK 667 (855)
Q Consensus 594 -----~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~~K 667 (855)
...++||||++ |+|.+++.. .++++..+..++.||+.||.|||+ ++|+||||||+|||++ .++.+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEE
Confidence 35689999997 699999842 468999999999999999999999 7999999999999997 567999
Q ss_pred Eeeccccc-----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-c
Q 003033 668 LSDFEFLA-----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-L 717 (855)
Q Consensus 668 L~DFg~~~-----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-~ 717 (855)
|+|||+.. ...++.++|||||||++|+|+||++||.............. .
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 241 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 99998432 14567789999999999999999999986654332111100 0
Q ss_pred -----------cc---------ccCCCC--CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 -----------KN---------LLDPLA--GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 -----------~~---------~~d~~~--~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.. ...+.. ...+...+..+.+|+.+||+.||.+||++ .+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 304 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA-EEAL 304 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCH-HHHh
Confidence 00 000000 00111245789999999999999999999 6664
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=325.32 Aligned_cols=220 Identities=25% Similarity=0.401 Sum_probs=180.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC---CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+|++++|||||+++++|. +..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46888999999999999999986 68899999976532 34567999999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeeccccc--
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFLA-- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~~-- 675 (855)
||+.+|+|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||+ +.++.+||+|||+..
T Consensus 106 e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 106 EVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp CCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred ecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999853 3468999999999999999999999 899999999999999 567899999998421
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhh
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
.+.++.++|||||||++|+|++|.+||........ .+..+... .....| ...
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~-~~~ 254 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT----FELPQW-KKV 254 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----CCSGGG-GGS
T ss_pred ccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC----CCCccc-ccC
Confidence 24578899999999999999999999987655432 22222211 111112 234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+.+|+.+||..||.+||++ .+++
T Consensus 255 s~~~~~li~~~L~~dp~~R~s~-~e~l 280 (484)
T 3nyv_A 255 SESAKDLIRKMLTYVPSMRISA-RDAL 280 (484)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred CHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 6789999999999999999999 6664
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=312.35 Aligned_cols=225 Identities=20% Similarity=0.265 Sum_probs=176.2
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
..++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|+.++||||+++++++..
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3468999999999999999999876 688999999754322 23568899999999999999999999832
Q ss_pred -ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 595 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 595 -~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..+|||||++ |+|.+++. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeec
Confidence 4689999996 57888874 248899999999999999999999 7999999999999999999999999974
Q ss_pred c------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc-ccc---------
Q 003033 674 L------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-LKN--------- 719 (855)
Q Consensus 674 ~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-~~~--------- 719 (855)
. ....++.++|||||||++|+|++|++||...+........-. +..
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 3 224578899999999999999999999987654432211100 000
Q ss_pred ---------------------cc----CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 720 ---------------------LL----DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 720 ---------------------~~----d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.. .+....++...+..+.+|+.+||..||.+|||+ +++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-~e~l~ 318 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV-DEALQ 318 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH-HHHHH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH-HHHhC
Confidence 00 000000111236789999999999999999999 66643
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=302.76 Aligned_cols=220 Identities=27% Similarity=0.405 Sum_probs=178.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---------hhhHHHHHHHHHhcC-CCcceeEeceec-
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---------PSEFQQEIDILSKIR-HPNLVTLVGACP- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---------~~~f~~Ei~iL~~l~-HpnIV~l~g~~~- 593 (855)
.++|...+.||+|+||.||+|... +..||||++....... ...+.+|+.+|.++. ||||+++++++.
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467899999999999999999986 5889999997653211 245789999999996 999999999984
Q ss_pred -CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
...++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEeccc
Confidence 4578999999999999999543 468999999999999999999999 899999999999999999999999998
Q ss_pred ccc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccc
Q 003033 673 FLA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNL 720 (855)
Q Consensus 673 ~~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~ 720 (855)
+.. ...++.++|||||||++|+|++|.+||........ .+..+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 247 (298)
T 1phk_A 170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ-- 247 (298)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--
T ss_pred chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--
Confidence 531 23467799999999999999999999976554322 12222111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 721 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 721 ~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
..... ....+..+.+|+.+||..||.+||++ .++
T Consensus 248 --~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~-~~l 281 (298)
T 1phk_A 248 --FGSPE-WDDYSDTVKDLVSRFLVVQPQKRYTA-EEA 281 (298)
T ss_dssp --CCTTT-GGGSCHHHHHHHHHHCCSSGGGSCCH-HHH
T ss_pred --cCccc-ccccCHHHHHHHHHHccCCcccCCCH-HHH
Confidence 11111 12345789999999999999999999 555
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=303.04 Aligned_cols=220 Identities=23% Similarity=0.365 Sum_probs=173.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec------------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------------ 593 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------------ 593 (855)
++|...+.||+|+||.||+|... +..||||++.... .....+.+|+.++.+++||||++++++|.
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 46888999999999999999975 6889999996421 23456889999999999999999999862
Q ss_pred ---CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEee
Q 003033 594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 594 ---~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
...++||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 3478999999999999999643 3457889999999999999999999 7999999999999999999999999
Q ss_pred ccccc----------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH
Q 003033 671 FEFLA----------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY 710 (855)
Q Consensus 671 Fg~~~----------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~ 710 (855)
||+.. .+.++.++|||||||++|+|++ ||........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 98542 1257789999999999999999 4432222111
Q ss_pred HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 711 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 711 ~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.... +..........++...+..+.+|+.+||+.||.+||++ .+++
T Consensus 237 ~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~~ll 282 (303)
T 1zy4_A 237 ILKK--LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA-RTLL 282 (303)
T ss_dssp HHHH--HHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred HHHh--ccccccccCccccccchHHHHHHHHHHHhcCcccCcCH-HHHh
Confidence 1111 11111122234555566789999999999999999999 5554
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=301.10 Aligned_cols=218 Identities=26% Similarity=0.400 Sum_probs=179.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.+++.++||||+++++++. +..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357899999999999999999986 6899999986532 234567899999999999999999999984 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc---
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS--- 676 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~--- 676 (855)
|||+++++|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999999543 358999999999999999999999 7999999999999999999999999985321
Q ss_pred ---------------------CC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhh
Q 003033 677 ---------------------GE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 677 ---------------------~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~ 732 (855)
.. .+.++||||||+++|+|++|+.||........ .+..+. ..+|...
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~~ 234 (276)
T 2h6d_A 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV---------FYIPEYL 234 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---------CCCCTTS
T ss_pred CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc---------ccCchhc
Confidence 11 25689999999999999999999976543221 111111 1233444
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+..+.+|+.+||+.||.+||++ .++++
T Consensus 235 ~~~l~~li~~~l~~~p~~Rps~-~~~l~ 261 (276)
T 2h6d_A 235 NRSVATLLMHMLQVDPLKRATI-KDIRE 261 (276)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCH-HHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCH-HHHHh
Confidence 5789999999999999999999 66654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=311.57 Aligned_cols=220 Identities=20% Similarity=0.270 Sum_probs=179.7
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCCCcceeEeceec--CceEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~L 598 (855)
...+|...+.||+|+||.||++... +..||+|++...... ....|.+|+.+++.++||||++++++|. +..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3457999999999999999999986 478999998765332 2456889999999999999999999984 45789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++++|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 119 v~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999988543 468999999999999999999999 799999999999999999999999998542
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
...++.++|||||||++|+|++|++||............... ...+|...+
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-------~~~~~~~~~ 265 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHIN 265 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT-------CCCCCTTSC
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC-------CCCCCccCC
Confidence 123567899999999999999999999765443322111100 012233445
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+.+|+.+||+.||.+||++ .+++
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~-~ell 290 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTI-NELL 290 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCG-GGGG
T ss_pred HHHHHHHHHHccCChhHCcCH-HHHh
Confidence 779999999999999999999 5554
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=329.96 Aligned_cols=216 Identities=21% Similarity=0.288 Sum_probs=178.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|...+.||+|+||.||+|... ++.||||++.... ......+.+|+.+|.+++|||||+++++|. +..|||
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888999999999999999986 6889999997532 234567889999999999999999999984 468999
Q ss_pred EEecCCCCHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----
Q 003033 600 YEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---- 674 (855)
|||++||+|.+++.... ....+++..+..|+.||+.||.|||+ ++|+||||||+||||+.+|++||+|||+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999986432 23569999999999999999999999 89999999999999999999999999843
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH------HHHHHhhcccccccCCCCCC
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~------~~~~~~~~~~~~~~d~~~~~ 727 (855)
.+..++.++|||||||++|||+||++||..... ....+... ...
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~---------~~~ 411 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ---------AVT 411 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC---------CCC
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc---------ccC
Confidence 123467889999999999999999999975421 11111111 123
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
+|...+..+.+|+.+||..||.+||++
T Consensus 412 ~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 412 YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 455566889999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=325.79 Aligned_cols=221 Identities=27% Similarity=0.435 Sum_probs=179.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC--CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|...++||+|+||.||+|... +..||||++... .......+.+|+.+|++++|||||++++++. ...++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 46889999999999999999986 688999998643 2234677999999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC---CCCcEEEeeccccc---
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFEFLA--- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~~KL~DFg~~~--- 675 (855)
||++|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++ .++.+||+|||+..
T Consensus 102 ~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 102 LYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999988543 358999999999999999999999 8999999999999995 45689999998532
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
.+.++.++|||||||++|+|++|.+||........ .+..+.... ....| ...+
T Consensus 176 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~-~~~s 250 (486)
T 3mwu_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF----DLPQW-RTIS 250 (486)
T ss_dssp CC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS----CSGGG-GGSC
T ss_pred CCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----CCccc-CCCC
Confidence 23477899999999999999999999976654332 222222111 11112 2345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+.+|+.+||..||.+||++ .++++
T Consensus 251 ~~~~~li~~~L~~dp~~R~t~-~~~l~ 276 (486)
T 3mwu_A 251 DDAKDLIRKMLTFHPSLRITA-TQCLE 276 (486)
T ss_dssp HHHHHHHHHHTCSSTTTSCCH-HHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCH-HHHhc
Confidence 789999999999999999999 66654
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=313.07 Aligned_cols=225 Identities=27% Similarity=0.442 Sum_probs=177.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
.++|.....||+|+||.||+|... +..||||++....... ...+.+|+.++.+++||||++++++|. +..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357899999999999999999987 6789999987654322 345789999999999999999999984 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
||+++++|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 104 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 104 EFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp ECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 99999999888642 3459999999999999999999999 899999999999999999999999998431
Q ss_pred ---------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc--------------
Q 003033 676 ---------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK-------------- 716 (855)
Q Consensus 676 ---------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~-------------- 716 (855)
...++.++|||||||++|+|++|++||............ +.
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 125678999999999999999999999766543322111 00
Q ss_pred cccccCC-CCCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 717 LKNLLDP-LAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 717 ~~~~~d~-~~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
+.....+ .....+ ...+..+.+|+.+||+.||.+||++ .++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-~el 304 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC-AEL 304 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCG-GGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCH-HHH
Confidence 0000000 000011 1245789999999999999999999 444
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=304.80 Aligned_cols=229 Identities=25% Similarity=0.354 Sum_probs=178.4
Q ss_pred cccCCccccceeeccCceEEEEEEEC---CeEEEEEEecCCCC--CChhhHHHHHHHHHhc---CCCcceeEeceec---
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL--QGPSEFQQEIDILSKI---RHPNLVTLVGACP--- 593 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~--- 593 (855)
...++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+++.+ +||||++++++|.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45578999999999999999999883 57899999875432 2345688899888877 8999999999874
Q ss_pred ----CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEe
Q 003033 594 ----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 669 (855)
Q Consensus 594 ----~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~ 669 (855)
...++||||+. |+|.+++.... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEe
Confidence 24789999997 69999986432 3458999999999999999999999 799999999999999999999999
Q ss_pred eccccc------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------
Q 003033 670 DFEFLA------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK--------- 716 (855)
Q Consensus 670 DFg~~~------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~--------- 716 (855)
|||+.. ...++.++|||||||++|+|+||++||............-.
T Consensus 163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred cCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 997431 24568899999999999999999999986654332211100
Q ss_pred cccc-------c----CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 LKNL-------L----DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ~~~~-------~----d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+... . ......++...+..+.+|+.+||..||.+||++ .+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 295 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA-YSAL 295 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCH-HHHh
Confidence 0000 0 000011122345789999999999999999999 5654
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=301.04 Aligned_cols=218 Identities=24% Similarity=0.320 Sum_probs=176.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC----CCChhhHHHHHHHHHhcCCCcceeEecee--c--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRHPNLVTLVGAC--P--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~--~~~~ 597 (855)
++|...+.||+|+||.||++... +..||||++.... ......|.+|+.++.+++||||+++++++ . ...+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 57999999999999999999885 5789999997532 23356789999999999999999999987 2 3578
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc-
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS- 676 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~- 676 (855)
+||||+++| |.+++... ....+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+...
T Consensus 85 lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 999999876 77777543 23569999999999999999999999 7999999999999999999999999985421
Q ss_pred ----------------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCC
Q 003033 677 ----------------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAG 726 (855)
Q Consensus 677 ----------------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~ 726 (855)
..++.++|||||||++|+|++|+.||......... +..+. .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~---------~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS---------Y 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC---------C
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC---------C
Confidence 11256899999999999999999999865543321 12211 1
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.+|...+..+.+|+.+||..||.+||++ .++++
T Consensus 231 ~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll~ 263 (305)
T 2wtk_C 231 AIPGDCGPPLSDLLKGMLEYEPAKRFSI-RQIRQ 263 (305)
T ss_dssp CCCSSSCHHHHHHHHHHTCSSTTTSCCH-HHHHH
T ss_pred CCCCccCHHHHHHHHHHccCChhhCCCH-HHHhc
Confidence 2334455789999999999999999999 66653
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=313.46 Aligned_cols=222 Identities=27% Similarity=0.449 Sum_probs=178.3
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--------hhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--------PSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
..+|.....||.|+||.||+|.+. +..||||++....... ...+.+|+.++.++ +||||++++++|.
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 456888999999999999999986 6899999998654221 34578999999999 7999999999984
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
...+|||||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 4688999999999999999533 458999999999999999999999 7999999999999999999999999984
Q ss_pred cc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--Hhhccccccc
Q 003033 674 LA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLL 721 (855)
Q Consensus 674 ~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~ 721 (855)
.. ...++.++|||||||++|+|+||++||......... +..+...
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~--- 323 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ--- 323 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC---
Confidence 31 123677899999999999999999999765443221 1122111
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.....| ...+..+.+|+.+||..||.+||++ .++++
T Consensus 324 -~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~-~ell~ 359 (365)
T 2y7j_A 324 -FSSPEW-DDRSSTVKDLISRLLQVDPEARLTA-EQALQ 359 (365)
T ss_dssp -CCHHHH-SSSCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred -CCCccc-ccCCHHHHHHHHHHcCCChhHCcCH-HHHhc
Confidence 000001 1234679999999999999999999 66643
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=317.48 Aligned_cols=227 Identities=21% Similarity=0.318 Sum_probs=173.5
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC-------
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE------- 594 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------- 594 (855)
....++|...+.||+|+||.||+|... +..||||++.... ..+.+|+.+|+.++|||||+++++|..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999885 6889999987542 234589999999999999999998721
Q ss_pred ---------------------------------ceEEEEEecCCCCHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHH
Q 003033 595 ---------------------------------VWTLVYEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFL 640 (855)
Q Consensus 595 ---------------------------------~~~LV~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yL 640 (855)
..+|||||++ |+|.+.+.. ......+++..+..|+.||+.||.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2779999997 588777642 12345699999999999999999999
Q ss_pred hhcCCCCceecccccCceeeC-CCCcEEEeeccccc-------------------------cCCCCcchhHHHHHHHHHH
Q 003033 641 HSCKPHSIVHGDLKPANILLD-ANFVSKLSDFEFLA-------------------------SGELTPKSDVYSFGIILLR 694 (855)
Q Consensus 641 H~~~~~~IvHrDLKp~NILld-~~~~~KL~DFg~~~-------------------------~~~~t~ksDVwSfGvvl~e 694 (855)
|+ ++|+||||||+|||++ .++.+||+|||.+. ...++.++|||||||++|+
T Consensus 158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 99 8999999999999997 68999999997431 1347889999999999999
Q ss_pred HHhCCCCCCCchHHHHHHhhcc----------------cccccCC--CCCC----CChhhHHHHHHHHHHhhccCCCCCC
Q 003033 695 LLTGRPALGITKEVQYALDTGK----------------LKNLLDP--LAGD----WPFVQAEQLANLAMRCCEMSRKSRP 752 (855)
Q Consensus 695 lltG~~pf~~~~~~~~~~~~~~----------------~~~~~d~--~~~~----~p~~~~~~l~~L~~~Cl~~dP~~RP 752 (855)
|++|++||............-. .....-+ .... +|...+..+.+|+.+||..||.+||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999987654433222100 0000000 0111 2233457799999999999999999
Q ss_pred ChHHHHH
Q 003033 753 ELGKDVW 759 (855)
Q Consensus 753 s~~~evl 759 (855)
++ .+++
T Consensus 315 t~-~e~l 320 (383)
T 3eb0_A 315 NP-YEAM 320 (383)
T ss_dssp CH-HHHH
T ss_pred CH-HHHh
Confidence 99 6664
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=338.61 Aligned_cols=231 Identities=25% Similarity=0.379 Sum_probs=189.2
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-C
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-E 594 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~ 594 (855)
+......+|...+.||+|+||.||+|.+. +..||||.+...... ....|.+|+.+|++++|||||+++|++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 463 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN 463 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 34445567999999999999999999885 256999998754322 2357899999999999999999999984 4
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||+++|+|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCC
Confidence 678999999999999999643 3468999999999999999999999 79999999999999999999999999853
Q ss_pred c--------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCC
Q 003033 675 A--------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLA 725 (855)
Q Consensus 675 ~--------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~ 725 (855)
. ...++.++|||||||++|||++ |.+||........ .+..+. .
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~--------~ 610 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE--------R 610 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC--------C
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--------C
Confidence 2 2346778999999999999997 9999976544332 122211 1
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...|...+..+.+|+.+||..||.+||++ .++++.|+.+.
T Consensus 611 ~~~~~~~~~~l~~li~~~l~~dP~~RPs~-~el~~~L~~il 650 (656)
T 2j0j_A 611 LPMPPNCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLSTIL 650 (656)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHHH
Confidence 12344456789999999999999999999 88999998874
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=325.97 Aligned_cols=223 Identities=26% Similarity=0.429 Sum_probs=177.4
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-------------CChhhHHHHHHHHHhcCCCcceeEe
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-------------QGPSEFQQEIDILSKIRHPNLVTLV 589 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-------------~~~~~f~~Ei~iL~~l~HpnIV~l~ 589 (855)
...++|...++||+|+||.||+|... +..||||++..... .....+.+|+.+|++++|||||+++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 34578999999999999999999986 47899999976432 2245788999999999999999999
Q ss_pred ceec--CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC---
Q 003033 590 GACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF--- 664 (855)
Q Consensus 590 g~~~--~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~--- 664 (855)
++|. ...+||||||++|+|.+++... ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCS
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCc
Confidence 9994 4578999999999999988543 458999999999999999999999 7999999999999998775
Q ss_pred cEEEeeccccc-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhccccc
Q 003033 665 VSKLSDFEFLA-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKN 719 (855)
Q Consensus 665 ~~KL~DFg~~~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~ 719 (855)
.+||+|||+.. .+.++.++|||||||++|+|++|.+||........ .+..+.+..
T Consensus 187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266 (504)
T ss_dssp SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 69999998532 13467899999999999999999999987654332 222222110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+ ...| ...+..+.+|+.+||..||.+||++ .+++
T Consensus 267 --~--~~~~-~~~s~~~~~li~~~L~~dp~~R~t~-~e~l 300 (504)
T 3q5i_A 267 --D--FNDW-KNISDEAKELIKLMLTYDYNKRCTA-EEAL 300 (504)
T ss_dssp --C--HHHH-TTSCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred --C--cccc-CCCCHHHHHHHHHHcCCChhHCCCH-HHHh
Confidence 0 0011 1235789999999999999999999 6664
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=318.45 Aligned_cols=166 Identities=27% Similarity=0.344 Sum_probs=143.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-------Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-------EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------~~ 595 (855)
.++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|++++||||+++++++. ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999886 578999999754322 2457889999999999999999999983 34
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.||||||+. |+|.+++.. ...+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 799999985 699999853 3469999999999999999999999 799999999999999999999999998532
Q ss_pred ------------------------------------------------cCCCCcchhHHHHHHHHHHHHhCC
Q 003033 676 ------------------------------------------------SGELTPKSDVYSFGIILLRLLTGR 699 (855)
Q Consensus 676 ------------------------------------------------~~~~t~ksDVwSfGvvl~elltG~ 699 (855)
...++.++|||||||++|||++|.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~ 249 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence 234778899999999999999843
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=317.28 Aligned_cols=225 Identities=23% Similarity=0.326 Sum_probs=171.4
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec------C--ceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------E--VWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~--~~~ 597 (855)
..+|...+.||+|+||.||+|... +..||+|++.... ....+|+.+|+.++|||||+++++|. + ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 346999999999999999999986 4669999886432 23347999999999999999999882 1 267
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-CCCcEEEeeccccc-
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFEFLA- 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~~KL~DFg~~~- 675 (855)
|||||++++.+............+++..+..++.||+.||.|||+ ++|+||||||+|||++ .++.+||+|||+..
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999875444333222334579999999999999999999999 8999999999999999 79999999998431
Q ss_pred ------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc---------------
Q 003033 676 ------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK--------------- 716 (855)
Q Consensus 676 ------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~--------------- 716 (855)
...++.++|||||||++|+|++|++||............-.
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 23478899999999999999999999987654433221110
Q ss_pred -cc-cccCCC-C----CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 -LK-NLLDPL-A----GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 -~~-~~~d~~-~----~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+. ..+... . ..++...+..+.+|+.+||..||.+||++ .+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 320 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA-IEAL 320 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH-HHHH
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCH-HHHh
Confidence 00 000000 0 01122345789999999999999999999 5554
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=309.68 Aligned_cols=231 Identities=21% Similarity=0.263 Sum_probs=166.3
Q ss_pred hhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC------
Q 003033 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE------ 594 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------ 594 (855)
.....++|...+.||+|+||.||+|... +..||||++.... .....+.+|+..+..++||||++++++|..
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence 3445678999999999999999999986 6889999986543 344567889999999999999999998821
Q ss_pred ---ceEEEEEecCCCCHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCceecccccCceeeCC-CCcEE
Q 003033 595 ---VWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIFLH--SCKPHSIVHGDLKPANILLDA-NFVSK 667 (855)
Q Consensus 595 ---~~~LV~Ey~~~GsL~~~L~-~~~~~~~l~~~~~~~i~~qia~aL~yLH--~~~~~~IvHrDLKp~NILld~-~~~~K 667 (855)
..++||||+++ +|.+.+. .......+++..+..++.|++.||.||| + ++|+||||||+|||++. ++.+|
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEE
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEE
Confidence 26899999976 4544432 2234457899999999999999999999 6 89999999999999996 89999
Q ss_pred Eeeccccc-------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc-----
Q 003033 668 LSDFEFLA-------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL----- 717 (855)
Q Consensus 668 L~DFg~~~-------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~----- 717 (855)
|+|||+.. ...++.++|||||||++|+|+||++||...............
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 252 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252 (360)
T ss_dssp ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCC
Confidence 99997431 223788999999999999999999999766543222111000
Q ss_pred -------------ccccCCC-------CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 -------------KNLLDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 -------------~~~~d~~-------~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....+.. ....+...+..+.+|+.+||+.||.+||++ .+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 313 (360)
T 3e3p_A 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP-YEAL 313 (360)
T ss_dssp HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCH-HHHT
T ss_pred HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCH-HHHh
Confidence 0000000 011122356789999999999999999999 5654
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=312.49 Aligned_cols=233 Identities=24% Similarity=0.312 Sum_probs=179.0
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP- 593 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~- 593 (855)
..-.++.....+|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|.+++||||+++++++.
T Consensus 17 ~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 96 (364)
T 3qyz_A 17 MVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRA 96 (364)
T ss_dssp BCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECC
T ss_pred EEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEec
Confidence 333444455678999999999999999999876 578999999754322 2356889999999999999999999883
Q ss_pred ------CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 594 ------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 594 ------~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
...++||||+. |+|.+++.. ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+|
T Consensus 97 ~~~~~~~~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~k 168 (364)
T 3qyz_A 97 PTIEQMKDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168 (364)
T ss_dssp SSTTTCCCEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEE
T ss_pred CCccccceEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEE
Confidence 24789999996 699998853 358999999999999999999999 8999999999999999999999
Q ss_pred Eeeccccc-----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----
Q 003033 668 LSDFEFLA-----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT---- 714 (855)
Q Consensus 668 L~DFg~~~-----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~---- 714 (855)
|+|||+.. ...++.++|||||||++|+|+||++||............
T Consensus 169 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~ 248 (364)
T 3qyz_A 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248 (364)
T ss_dssp ECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHH
T ss_pred EEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHh
Confidence 99997421 233688999999999999999999999755432111100
Q ss_pred cc-----------------cccccCCCCCCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 715 GK-----------------LKNLLDPLAGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 715 ~~-----------------~~~~~d~~~~~~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+. ...........| +...+..+.+|+.+||..||.+||++ .+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~e~l 312 (364)
T 3qyz_A 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV-EQAL 312 (364)
T ss_dssp CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred CCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCH-HHHh
Confidence 00 000000001111 11235679999999999999999999 5554
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=321.71 Aligned_cols=223 Identities=26% Similarity=0.352 Sum_probs=171.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec------C--ceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------E--VWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~--~~~ 597 (855)
.+|...+.||+|+||.||+|.+. +..||||++.... ..+.+|+++|+.++|||||+++++|. + .++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999985 6889999986532 23458999999999999999999872 1 257
Q ss_pred EEEEecCCCCHHHHhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-CcEEEeeccccc
Q 003033 598 LVYEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFEFLA 675 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~~KL~DFg~~~ 675 (855)
|||||+++ +|.+.+.. ......+++..+..++.||+.||.|||+ ++|+||||||+||||+.+ +.+||+|||+..
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 66665532 1234579999999999999999999999 899999999999999955 678999998431
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcc--------------
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-------------- 716 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~-------------- 716 (855)
...++.++|||||||+||||++|++||............-.
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 12578899999999999999999999987654433221100
Q ss_pred --cccccCCC--CCCC----ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 --LKNLLDPL--AGDW----PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 --~~~~~d~~--~~~~----p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.....+. ...| +...+..+.+|+.+||..||.+||++ .+++
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~-~e~l 335 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP-LEAC 335 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCH-HHHh
Confidence 00000000 0111 22345789999999999999999999 5554
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=308.51 Aligned_cols=225 Identities=24% Similarity=0.303 Sum_probs=176.7
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-------Cc
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-------EV 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------~~ 595 (855)
..++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|++++||||+++++++. ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3568999999999999999999987 688999999753221 2346789999999999999999999873 34
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.++||||+. |+|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+..
T Consensus 89 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 789999996 699998853 358999999999999999999999 799999999999999999999999998431
Q ss_pred ------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----c
Q 003033 676 ------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G 715 (855)
Q Consensus 676 ------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~ 715 (855)
...++.++|||||||++|+|++|++||............ +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 240 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence 245677899999999999999999999876543322111 0
Q ss_pred ccc--------------cccCCC----CC---CCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 716 KLK--------------NLLDPL----AG---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 716 ~~~--------------~~~d~~----~~---~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... ..+... .. ..+...+..+.+|+.+||..||.+||++ .+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 304 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA-KEAL 304 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCH-HHHh
Confidence 000 000000 00 0011345678999999999999999999 6654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=314.13 Aligned_cols=226 Identities=21% Similarity=0.315 Sum_probs=167.6
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-------
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP------- 593 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------- 593 (855)
...++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|+.++||||+++++++.
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 34578999999999999999999875 688999999754322 2456889999999999999999999883
Q ss_pred -CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE 672 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg 672 (855)
...++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 3468999999 7899998842 469999999999999999999999 899999999999999999999999997
Q ss_pred ccc-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------------
Q 003033 673 FLA-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------ 717 (855)
Q Consensus 673 ~~~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~------------ 717 (855)
+.. ...++.++|||||||++|+|++|++||...+........-..
T Consensus 178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 431 145788999999999999999999999876654322111000
Q ss_pred -----ccccCCC--CCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 -----KNLLDPL--AGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 -----~~~~d~~--~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+... ....+ ...+..+.+|+.+||..||.+||++ .+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~-~e~L 310 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-AQAL 310 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCH-HHHh
Confidence 0000000 00111 1234678999999999999999999 5553
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=308.02 Aligned_cols=230 Identities=20% Similarity=0.252 Sum_probs=179.5
Q ss_pred ccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCCh-----------------hhHHHHHHHHHhcCCCcceeE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP-----------------SEFQQEIDILSKIRHPNLVTL 588 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~-----------------~~f~~Ei~iL~~l~HpnIV~l 588 (855)
..++|...+.||+|+||.||+|...+..||||++........ ..|.+|+.++.+++||||+++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 356899999999999999999999889999999975422111 789999999999999999999
Q ss_pred eceec--CceEEEEEecCCCCHHHH------hcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee
Q 003033 589 VGACP--EVWTLVYEYLPNGSLEDR------LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 660 (855)
Q Consensus 589 ~g~~~--~~~~LV~Ey~~~GsL~~~------L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl 660 (855)
++++. +..++||||+++|+|.++ +.. .....+++..+..++.||+.||.|||+. ++|+||||||+|||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCCChHhEEE
Confidence 99984 468899999999999998 532 1246799999999999999999999972 589999999999999
Q ss_pred CCCCcEEEeeccccc-----------------------cC-CCCc-chhHHHHHHHHHHHHhCCCCCCCchH---HHHHH
Q 003033 661 DANFVSKLSDFEFLA-----------------------SG-ELTP-KSDVYSFGIILLRLLTGRPALGITKE---VQYAL 712 (855)
Q Consensus 661 d~~~~~KL~DFg~~~-----------------------~~-~~t~-ksDVwSfGvvl~elltG~~pf~~~~~---~~~~~ 712 (855)
+.++.+||+|||... .. .++. ++|||||||++|+|++|.+||..... ....+
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i 265 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265 (348)
T ss_dssp CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHH
T ss_pred cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence 999999999997532 11 3444 89999999999999999999976533 22222
Q ss_pred hhcccccccCCC--C--------CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 713 DTGKLKNLLDPL--A--------GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 713 ~~~~~~~~~d~~--~--------~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+......+.. . ...+...+..+.+|+.+||+.||.+||++ .+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~-~e~l 321 (348)
T 2pml_X 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS-EDAL 321 (348)
T ss_dssp TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCH-HHHH
T ss_pred hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCH-HHHh
Confidence 222111100000 0 00003345789999999999999999999 5553
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=335.37 Aligned_cols=215 Identities=20% Similarity=0.269 Sum_probs=179.7
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~L 598 (855)
..+|...+.||+|+||.||+|... +..||||+++.. .......+..|..+|..+ +||||+.+++++. +.+||
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 357888999999999999999987 467999999753 223456788999999988 7999999999985 46889
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
||||+++|+|.++|... ..+++..+..|+.||+.||.|||+ ++||||||||+||||+.++++||+|||+..
T Consensus 420 V~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 99999999999999643 358999999999999999999999 899999999999999999999999998532
Q ss_pred ----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 676 ----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 ----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
...|+.++|||||||+||||++|++||...+........ +. ....+|...+
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i------~~-~~~~~p~~~s 566 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI------ME-HNVAYPKSMS 566 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HS-SCCCCCTTSC
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH------Hh-CCCCCCccCC
Confidence 245788999999999999999999999876554322111 11 1123555667
Q ss_pred HHHHHHHHHhhccCCCCCCCh
Q 003033 734 EQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.++.+|+.+||+.||.+||++
T Consensus 567 ~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 567 KEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHHHHHHHHSCSSSTTCTTC
T ss_pred HHHHHHHHHHccCCHHHCCCC
Confidence 889999999999999999997
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=316.66 Aligned_cols=226 Identities=20% Similarity=0.296 Sum_probs=175.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC--------CCcceeEeceec---
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR--------HPNLVTLVGACP--- 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~--------HpnIV~l~g~~~--- 593 (855)
.++|...++||+|+||.||+|... +..||||++.... .....+.+|+.+|..++ ||||++++++|.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 468999999999999999999876 6889999997432 23467889999999996 788999999874
Q ss_pred ---CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeCCCC-----
Q 003033 594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANF----- 664 (855)
Q Consensus 594 ---~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld~~~----- 664 (855)
...+|||||+ +|+|.+++... ....+++..+..|+.||+.||.|||+ + +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhh
Confidence 2578999999 66776666433 23569999999999999999999999 7 899999999999999775
Q ss_pred --------------------------------------------cEEEeeccccc----------------------cCC
Q 003033 665 --------------------------------------------VSKLSDFEFLA----------------------SGE 678 (855)
Q Consensus 665 --------------------------------------------~~KL~DFg~~~----------------------~~~ 678 (855)
.+||+|||... ...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence 79999998532 345
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCCCCch------HHHH---HHh-hccc----------c-----------cccCC----
Q 003033 679 LTPKSDVYSFGIILLRLLTGRPALGITK------EVQY---ALD-TGKL----------K-----------NLLDP---- 723 (855)
Q Consensus 679 ~t~ksDVwSfGvvl~elltG~~pf~~~~------~~~~---~~~-~~~~----------~-----------~~~d~---- 723 (855)
++.++|||||||+||+|+||++||.... .... ... .+.. . .+.+.
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence 7889999999999999999999996432 1110 000 0000 0 00000
Q ss_pred ------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 ------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 ------~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
....|+...+..+.+|+.+||+.||.+||++ .+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~e~l 390 (397)
T 1wak_A 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATA-AECL 390 (397)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCH-HHHH
T ss_pred hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCH-HHHh
Confidence 0123566777889999999999999999999 6664
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=303.83 Aligned_cols=223 Identities=21% Similarity=0.300 Sum_probs=176.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceecC--------
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE-------- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------- 594 (855)
..+|.....||+|+||.||+|... +..||||++....... ...+.+|+.+|+.++||||+++++++..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999886 6899999997643222 3568899999999999999999999843
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
..++||||+. |+|.+++. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccc
Confidence 2489999997 68888773 248999999999999999999999 79999999999999999999999999743
Q ss_pred c-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc-----------
Q 003033 675 A-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK----------- 716 (855)
Q Consensus 675 ~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~----------- 716 (855)
. ...++.++|||||||++|+|++|++||............ +.
T Consensus 174 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 174 RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp TC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred cCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 1 145788999999999999999999999765543221110 00
Q ss_pred ------ccccc---CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 ------LKNLL---DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ------~~~~~---d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+. .+.....+...+..+.+|+.+||..||.+||++ .+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~-~e~l 304 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTA-AQAL 304 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCH-HHHH
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCH-HHHh
Confidence 00000 001111223456789999999999999999999 5553
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=293.94 Aligned_cols=221 Identities=27% Similarity=0.438 Sum_probs=178.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC--CCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|...+.||+|+||.||+|... +..||||++.... ......+.+|+.++++++||||+++++++. +..++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 46889999999999999999985 6889999987543 234567999999999999999999999984 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC---CcEEEeeccccc---
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFEFLA--- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~~KL~DFg~~~--- 675 (855)
|+++++|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.+ +.+||+|||+..
T Consensus 102 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 102 LYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp CCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred ccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999988543 358999999999999999999999 799999999999999754 479999998532
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
.+.++.++|||||||++|+|++|.+||........ .+..+..... ...| ...+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~ 250 (287)
T 2wei_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----LPQW-RTIS 250 (287)
T ss_dssp CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----SGGG-TTSC
T ss_pred CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----chhh-hhcC
Confidence 13467899999999999999999999976654332 2222221110 0011 1335
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+.+|+.+||..||.+||++ .++++
T Consensus 251 ~~~~~li~~~l~~dp~~Rps~-~ell~ 276 (287)
T 2wei_A 251 DDAKDLIRKMLTFHPSLRITA-TQCLE 276 (287)
T ss_dssp HHHHHHHHHHTCSSGGGSCCH-HHHHH
T ss_pred HHHHHHHHHHcccChhhCcCH-HHHhc
Confidence 779999999999999999999 66654
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=317.48 Aligned_cols=177 Identities=27% Similarity=0.361 Sum_probs=150.2
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc------CCCcceeEecee--cCc
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI------RHPNLVTLVGAC--PEV 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l------~HpnIV~l~g~~--~~~ 595 (855)
...+|...+.||+|+||.||+|... +..||||++.... .....+.+|+.++..+ +||||+.++++| .+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 3457999999999999999999886 5889999997532 2235678899999887 577999999988 457
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc--EEEeeccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--SKLSDFEF 673 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--~KL~DFg~ 673 (855)
.+|||||+. |+|.+++... ....+++..+..|+.||+.||.|||+ ++||||||||+||||+.++. +||+|||+
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 899999995 6999988643 23459999999999999999999999 79999999999999999887 99999985
Q ss_pred c----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH
Q 003033 674 L----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV 708 (855)
Q Consensus 674 ~----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~ 708 (855)
. ....++.++|||||||+||||+||++||......
T Consensus 249 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 249 SCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 3 2345788999999999999999999999766543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=308.65 Aligned_cols=224 Identities=21% Similarity=0.315 Sum_probs=176.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceecC--c----
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE--V---- 595 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~---- 595 (855)
..++|...+.||+|+||.||+|... +..||||++....... ...+.+|+.+++.++||||++++++|.. .
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4578999999999999999999886 6899999997643222 3568899999999999999999999843 2
Q ss_pred --eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 596 --WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 596 --~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
.++||||+. |+|.+++. ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 389999996 68988873 248999999999999999999999 7999999999999999999999999974
Q ss_pred cc----------------------c-CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc------------
Q 003033 674 LA----------------------S-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK------------ 718 (855)
Q Consensus 674 ~~----------------------~-~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~------------ 718 (855)
.. . ..++.++|||||||++|+|+||++||................
T Consensus 191 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp C--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred ccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 31 1 467889999999999999999999998665433221110000
Q ss_pred ---------cccCCCCCCC---ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 719 ---------NLLDPLAGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 719 ---------~~~d~~~~~~---p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.......+ +...+..+.+|+.+||+.||.+||++ .+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~ell 322 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTA-AQAL 322 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCH-HHHH
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCH-HHHh
Confidence 0000000011 11235789999999999999999999 5553
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=301.88 Aligned_cols=226 Identities=22% Similarity=0.281 Sum_probs=175.6
Q ss_pred cCCccccceeeccCceEEEEEEE---CCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc------ceeEecee--cCc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLL---RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN------LVTLVGAC--PEV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~---~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn------IV~l~g~~--~~~ 595 (855)
.++|...+.||+|+||.||+|.. .+..||||+++... .....+.+|+.++..++|+| |+++++++ .+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45899999999999999999987 36889999997432 23456889999999997654 99999988 356
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-------------
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA------------- 662 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~------------- 662 (855)
.+|||||+ +|+|.+++... ...++++..+..++.||+.||.|||+ ++|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 89999999 89999998643 23468999999999999999999999 79999999999999987
Q ss_pred ------CCcEEEeecccc----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003033 663 ------NFVSKLSDFEFL----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 714 (855)
Q Consensus 663 ------~~~~KL~DFg~~----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~ 714 (855)
++.+||+|||+. ....++.++|||||||++|+|+||.+||...+........
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 678999999742 2345788999999999999999999999765443211110
Q ss_pred ccccc--------------ccCCCC-----------------------CCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 715 GKLKN--------------LLDPLA-----------------------GDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 715 ~~~~~--------------~~d~~~-----------------------~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
..... ...... ...+...+..+.+|+.+||+.||.+||++ .+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-~e 325 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL-RE 325 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH-HH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH-HH
Confidence 00000 000000 11123456789999999999999999999 56
Q ss_pred HH
Q 003033 758 VW 759 (855)
Q Consensus 758 vl 759 (855)
++
T Consensus 326 ll 327 (339)
T 1z57_A 326 AL 327 (339)
T ss_dssp HT
T ss_pred Hh
Confidence 53
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=301.90 Aligned_cols=231 Identities=24% Similarity=0.350 Sum_probs=180.2
Q ss_pred ccccchhhhhcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcC--CCcceeEe
Q 003033 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIR--HPNLVTLV 589 (855)
Q Consensus 515 ~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~--HpnIV~l~ 589 (855)
...+.+..+.....+|...+.||+|+||.||++... +..||||++...... ....|.+|+.+|.+++ ||||++++
T Consensus 15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~ 94 (313)
T 3cek_A 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94 (313)
T ss_dssp -----CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred CCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence 345667777777888999999999999999999876 578999999765332 2457889999999997 59999999
Q ss_pred ceec--CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEE
Q 003033 590 GACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 667 (855)
Q Consensus 590 g~~~--~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~K 667 (855)
+++. +..++||| +.+|+|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||+++ +.+|
T Consensus 95 ~~~~~~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~k 166 (313)
T 3cek_A 95 DYEITDQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLK 166 (313)
T ss_dssp EEEECSSEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEE
T ss_pred EEeecCCEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEE
Confidence 9984 46789999 5688999999643 468999999999999999999999 79999999999999964 8999
Q ss_pred Eeeccccc--------------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH
Q 003033 668 LSDFEFLA--------------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 709 (855)
Q Consensus 668 L~DFg~~~--------------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~ 709 (855)
|+|||+.. ...++.++|||||||++|+|++|++||.......
T Consensus 167 L~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (313)
T 3cek_A 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246 (313)
T ss_dssp ECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred EeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 99997431 0256778999999999999999999996542211
Q ss_pred HHHhhcccccccCC-CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 710 YALDTGKLKNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 710 ~~~~~~~~~~~~d~-~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
..+. ..+++ ....+|...+..+.+|+.+||..||.+||++ .+++
T Consensus 247 ~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~ell 291 (313)
T 3cek_A 247 SKLH-----AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-PELL 291 (313)
T ss_dssp HHHH-----HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred HHHH-----HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCH-HHHh
Confidence 1111 11111 1123344445789999999999999999999 5664
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=318.47 Aligned_cols=228 Identities=24% Similarity=0.332 Sum_probs=178.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcce-eEece--ecCceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV-TLVGA--CPEVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV-~l~g~--~~~~~~LV~E 601 (855)
.++|.+.++||+|+||.||+|.+. +..||||++.... ....+.+|+.++..|+|++.+ .+..+ ..+..+||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 468999999999999999999976 6889999987543 335689999999999875444 33333 3567889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---CCCCcEEEeeccccc---
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL---DANFVSKLSDFEFLA--- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~~KL~DFg~~~--- 675 (855)
|+ +|+|.+++... ...+++..++.|+.||+.||.|||+ ++||||||||+|||| +.++.+||+|||+..
T Consensus 84 ~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred CC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 99 99999999532 3469999999999999999999999 799999999999999 688999999998531
Q ss_pred -----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH---HH--HHHhhccccccc
Q 003033 676 -----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE---VQ--YALDTGKLKNLL 721 (855)
Q Consensus 676 -----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~---~~--~~~~~~~~~~~~ 721 (855)
...++.++|||||||+||+|++|++||..... .. ..+....+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 12356789999999999999999999975321 11 111111111111
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
......+ +.++.+|+.+||..+|.+||++ .+|++.|+.+..
T Consensus 238 ~~l~~~~----p~~l~~li~~cl~~dP~~RPs~-~el~~~L~~l~~ 278 (483)
T 3sv0_A 238 EALCRGY----PTEFASYFHYCRSLRFDDKPDY-SYLKRLFRDLFI 278 (483)
T ss_dssp HHHHTTS----CHHHHHHHHHHHTCCTTCCCCH-HHHHHHHHHHHH
T ss_pred HHHhcCC----cHHHHHHHHHHhcCChhhCcCH-HHHHHHHHHHHH
Confidence 1111222 4689999999999999999999 899999998744
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=302.58 Aligned_cols=228 Identities=23% Similarity=0.297 Sum_probs=171.2
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHH-HHHhcCCCcceeEeceec--CceEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEID-ILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~-iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
..++|.....||+|+||.||+|... +..||||++...... ....+..|+. +++.++||||+++++++. +..+||
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 3467899999999999999999987 789999999765321 2345666666 677789999999999983 467899
Q ss_pred EEecCCCCHHHHhcc--cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeCCCCcEEEeecccc--
Q 003033 600 YEYLPNGSLEDRLSC--KDNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFEFL-- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld~~~~~KL~DFg~~-- 674 (855)
|||+++ +|.+++.. ......+++..+..++.+++.||.|||+ . +|+||||||+|||++.++.+||+|||+.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999974 88877642 1224568999999999999999999999 6 8999999999999999999999999743
Q ss_pred --------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCC
Q 003033 675 --------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 --------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 728 (855)
....++.++|||||||++|+|++|+.||.........+.. .............
T Consensus 176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~ 254 (327)
T 3aln_A 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ-VVKGDPPQLSNSE 254 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CC-CCCSCCCCCCCCS
T ss_pred cccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHH-HhcCCCCCCCCcc
Confidence 1234678999999999999999999999764432221111 0111111111111
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+...+..+.+|+.+||..||.+||++ .+++
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~-~ell 284 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKY-KELL 284 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCH-HHHT
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCH-HHHH
Confidence 22345789999999999999999999 5653
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=314.58 Aligned_cols=170 Identities=25% Similarity=0.422 Sum_probs=136.1
Q ss_pred ccc-cceeeccCceEEEEEEEC----CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee----cCceEEEE
Q 003033 530 FDP-SLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTLVY 600 (855)
Q Consensus 530 f~~-~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~----~~~~~LV~ 600 (855)
|.. .++||+|+||.||+|.+. +..||||++.... ....+.+|+.+|++++|||||+++++| ....+|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 457999999999999975 4679999997543 345789999999999999999999998 33688999
Q ss_pred EecCCCCHHHHhccc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee----CCCCcEEEee
Q 003033 601 EYLPNGSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSD 670 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~~KL~D 670 (855)
||+. |+|.+++... .....+++..+..|+.||+.||.|||+ ++|+||||||+|||| +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 5888877421 122359999999999999999999999 899999999999999 7789999999
Q ss_pred ccccc----------------------------c-CCCCcchhHHHHHHHHHHHHhCCCCCCCc
Q 003033 671 FEFLA----------------------------S-GELTPKSDVYSFGIILLRLLTGRPALGIT 705 (855)
Q Consensus 671 Fg~~~----------------------------~-~~~t~ksDVwSfGvvl~elltG~~pf~~~ 705 (855)
||+.. . ..++.++|||||||+||+|+||++||...
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 98431 1 34788999999999999999999999644
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.3e-32 Score=304.50 Aligned_cols=187 Identities=29% Similarity=0.392 Sum_probs=152.9
Q ss_pred cchhhhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CC-----cceeEe
Q 003033 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HP-----NLVTLV 589 (855)
Q Consensus 518 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-Hp-----nIV~l~ 589 (855)
|.+..-....++|...+.||+|+||.||+|... +..||||+++... .....+.+|+.++..++ |+ +|+.++
T Consensus 44 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~ 122 (382)
T 2vx3_A 44 YIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLK 122 (382)
T ss_dssp BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred EEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence 334444556789999999999999999999886 5789999997432 12456778999999885 55 489999
Q ss_pred cee--cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC--CCCc
Q 003033 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANFV 665 (855)
Q Consensus 590 g~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld--~~~~ 665 (855)
+++ .+..+|||||++ |+|.+++.... ...+++..+..++.||+.||.|||.. ..+||||||||+|||++ .++.
T Consensus 123 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 123 RHFMFRNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp EEEEETTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred eeeccCCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 987 457899999995 69999986432 24589999999999999999999952 26899999999999994 5788
Q ss_pred EEEeecccc----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH
Q 003033 666 SKLSDFEFL----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV 708 (855)
Q Consensus 666 ~KL~DFg~~----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~ 708 (855)
+||+|||+. .+..++.++|||||||++|||+||++||......
T Consensus 200 ~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp EEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999843 2345788999999999999999999999866543
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=299.71 Aligned_cols=216 Identities=26% Similarity=0.406 Sum_probs=171.8
Q ss_pred cccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhc----CCCcceeEecee
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKI----RHPNLVTLVGAC 592 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l----~HpnIV~l~g~~ 592 (855)
...++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34567999999999999999999874 678999999765432 234567899999999 899999999998
Q ss_pred c--CceEEEEEe-cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-CCCcEEE
Q 003033 593 P--EVWTLVYEY-LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKL 668 (855)
Q Consensus 593 ~--~~~~LV~Ey-~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~~KL 668 (855)
. +..++|||| +.+++|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEE
Confidence 4 468899999 7899999999643 358999999999999999999999 7999999999999999 8899999
Q ss_pred eeccccc-----------------------cCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCC
Q 003033 669 SDFEFLA-----------------------SGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 724 (855)
Q Consensus 669 ~DFg~~~-----------------------~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~ 724 (855)
+|||+.. ...+ +.++|||||||++|+|++|+.||........ .
T Consensus 182 ~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~--------- 248 (312)
T 2iwi_A 182 IDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE----A--------- 248 (312)
T ss_dssp CCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH----T---------
T ss_pred EEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh----h---------
Confidence 9998532 1122 3479999999999999999999975443211 1
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 725 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 725 ~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...++...+..+.+|+.+||+.||.+||++ .++++
T Consensus 249 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~e~l~ 283 (312)
T 2iwi_A 249 ELHFPAHVSPDCCALIRRCLAPKPSSRPSL-EEILL 283 (312)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSTTTSCCH-HHHHH
T ss_pred ccCCcccCCHHHHHHHHHHccCChhhCcCH-HHHhc
Confidence 112334456789999999999999999999 66643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.98 E-value=7.3e-33 Score=307.90 Aligned_cols=226 Identities=16% Similarity=0.274 Sum_probs=173.8
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-----------CCcceeEeceec
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----------HPNLVTLVGACP 593 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----------HpnIV~l~g~~~ 593 (855)
..+|...+.||+|+||.||+|... +..||||++.... .....+.+|+.++.+++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 457999999999999999999975 6889999997432 23456889999999886 899999999884
Q ss_pred C------ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeC-----
Q 003033 594 E------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLD----- 661 (855)
Q Consensus 594 ~------~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld----- 661 (855)
. ..++||||+ +|+|.+++.... ...+++..+..|+.||+.||.|||+ + +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCC
Confidence 2 578999999 899999986432 3458999999999999999999999 7 899999999999994
Q ss_pred -CCCcEEEeecccc----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH---------H
Q 003033 662 -ANFVSKLSDFEFL----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEV---------Q 709 (855)
Q Consensus 662 -~~~~~KL~DFg~~----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~---------~ 709 (855)
..+.+||+|||+. ....++.++|||||||++|+|+||++||...... .
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 4558999999843 2345788999999999999999999999743311 0
Q ss_pred HHHh-hccc---------------------ccccC----------CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 710 YALD-TGKL---------------------KNLLD----------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 710 ~~~~-~~~~---------------------~~~~d----------~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
.... .+.+ ..+.. .....++...+..+.+|+.+||+.||.+||++ .+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~e 330 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA-GG 330 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH-HH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH-HH
Confidence 1000 0000 00000 00113455677899999999999999999999 66
Q ss_pred HH
Q 003033 758 VW 759 (855)
Q Consensus 758 vl 759 (855)
++
T Consensus 331 ll 332 (373)
T 1q8y_A 331 LV 332 (373)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-32 Score=295.47 Aligned_cols=226 Identities=20% Similarity=0.293 Sum_probs=163.1
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-h-hhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-P-SEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-~-~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
....++|.....||+|+||.||+|... +..||||++....... . ..+..+..++..++||||+++++++. +..+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 344567899999999999999999986 6899999997653221 1 23444555788889999999999984 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecccccCceeeCCCCcEEEeecccc--
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFEFL-- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~IvHrDLKp~NILld~~~~~KL~DFg~~-- 674 (855)
|||||+ ++.+..++... ...+++..+..++.+|+.||.|||+ + +|+||||||+|||++.++.+||+|||+.
T Consensus 101 lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp EEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 999999 55665555322 3468999999999999999999998 4 8999999999999999999999999743
Q ss_pred ---------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 003033 675 ---------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 675 ---------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~ 727 (855)
....++.++|||||||++|+|++|+.||.........+... ... ..+...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~-~~~~~~- 251 (318)
T 2dyl_A 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-LQE-EPPLLP- 251 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH-HHS-CCCCCC-
T ss_pred ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH-hcc-CCCCCC-
Confidence 12346779999999999999999999997532211111110 000 011110
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.....+..+.+|+.+||+.||.+||++ .+++
T Consensus 252 ~~~~~~~~l~~li~~~l~~dp~~Rps~-~~ll 282 (318)
T 2dyl_A 252 GHMGFSGDFQSFVKDCLTKDHRKRPKY-NKLL 282 (318)
T ss_dssp SSSCCCHHHHHHHHHHTCSCTTTSCCH-HHHT
T ss_pred ccCCCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 011235779999999999999999999 6664
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.1e-32 Score=296.91 Aligned_cols=226 Identities=24% Similarity=0.323 Sum_probs=173.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--C-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc------ceeEecee--cCc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--H-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN------LVTLVGAC--PEV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn------IV~l~g~~--~~~ 595 (855)
.++|...+.||+|+||.||+|... + ..||||+++... .....+.+|+.+|..++|+| ++.+++++ .+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999875 3 689999997432 23456889999999998766 88888877 457
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceee---------------
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL--------------- 660 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILl--------------- 660 (855)
.+|||||+ +|+|.+++... ...++++..+..|+.||+.||.|||+ ++|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccc
Confidence 89999999 67777777533 23469999999999999999999999 799999999999999
Q ss_pred ----CCCCcEEEeecccc----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003033 661 ----DANFVSKLSDFEFL----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 714 (855)
Q Consensus 661 ----d~~~~~KL~DFg~~----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~ 714 (855)
+.++.+||+|||+. ....++.++|||||||++|+|+||++||............
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 56789999999743 2346788999999999999999999999765543221111
Q ss_pred ccccc--------------ccCCCCCCC-----------------------ChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 715 GKLKN--------------LLDPLAGDW-----------------------PFVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 715 ~~~~~--------------~~d~~~~~~-----------------------p~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
..... ........| ....+..+.+|+.+||+.||.+||++ .+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-~e 330 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL-AE 330 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH-HH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH-HH
Confidence 00000 000000011 12335689999999999999999999 55
Q ss_pred HH
Q 003033 758 VW 759 (855)
Q Consensus 758 vl 759 (855)
++
T Consensus 331 ~l 332 (355)
T 2eu9_A 331 AL 332 (355)
T ss_dssp HT
T ss_pred Hh
Confidence 53
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.3e-32 Score=298.71 Aligned_cols=224 Identities=21% Similarity=0.327 Sum_probs=163.9
Q ss_pred cCCccccc-eeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHH-HHHhcCCCcceeEeceecC------ce
Q 003033 527 THNFDPSL-KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEID-ILSKIRHPNLVTLVGACPE------VW 596 (855)
Q Consensus 527 ~~~f~~~~-~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~-iL~~l~HpnIV~l~g~~~~------~~ 596 (855)
.++|.... .||+|+||.||+|... +..||||++... ....+|+. .+..++||||+++++++.. ..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 45788855 6999999999999987 689999999642 23334444 4566789999999998832 37
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeeccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEF 673 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~ 673 (855)
+|||||+++|+|.+++... ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 8999999999999999643 23469999999999999999999999 79999999999999976 45699999985
Q ss_pred cc-----------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-cccccccCCCCCCCC
Q 003033 674 LA-----------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-GKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~~-----------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~-~~~~~~~d~~~~~~p 729 (855)
.. ...++.++|||||||++|+|++|++||............ ..+............
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (336)
T 3fhr_A 178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW 257 (336)
T ss_dssp CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTS
T ss_pred ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhh
Confidence 42 223456899999999999999999999644322110000 000000000111111
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
...+..+.+|+.+||..||.+||++ .++++
T Consensus 258 ~~~~~~~~~li~~~L~~dP~~Rpt~-~ell~ 287 (336)
T 3fhr_A 258 SEVSEDAKQLIRLLLKTDPTERLTI-TQFMN 287 (336)
T ss_dssp TTCCHHHHHHHHHHSCSSGGGSCCH-HHHHH
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCH-HHHhc
Confidence 2346789999999999999999999 66654
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=300.77 Aligned_cols=216 Identities=21% Similarity=0.345 Sum_probs=175.7
Q ss_pred hcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcC--CCcceeEeceec
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIR--HPNLVTLVGACP 593 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~--HpnIV~l~g~~~ 593 (855)
.....+|...+.||+|+||.||+|... +..||||++...... ....+.+|+.++.+++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 345568999999999999999999875 688999999765332 2356789999999996 599999999984
Q ss_pred --CceEEEEEecCC-CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC-CCCcEEEe
Q 003033 594 --EVWTLVYEYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLS 669 (855)
Q Consensus 594 --~~~~LV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~~KL~ 669 (855)
+..++||||+.+ ++|.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++ .++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 468899999976 8999998543 468999999999999999999999 8999999999999999 78999999
Q ss_pred eccccc-----------------------cCC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCC
Q 003033 670 DFEFLA-----------------------SGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 725 (855)
Q Consensus 670 DFg~~~-----------------------~~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~ 725 (855)
|||+.. ... ++.++|||||||++|+|+||++||....... .+..
T Consensus 193 Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~-------- 260 (320)
T 3a99_A 193 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RGQV-------- 260 (320)
T ss_dssp CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----HCCC--------
T ss_pred eCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh----cccc--------
Confidence 998532 112 2567899999999999999999997544321 1111
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.++...+..+.+|+.+||+.||.+||++ .+++
T Consensus 261 -~~~~~~~~~~~~li~~~l~~dp~~Rps~-~~ll 292 (320)
T 3a99_A 261 -FFRQRVSSECQHLIRWCLALRPSDRPTF-EEIQ 292 (320)
T ss_dssp -CCSSCCCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred -cccccCCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 1223345789999999999999999999 6664
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-32 Score=308.72 Aligned_cols=220 Identities=23% Similarity=0.292 Sum_probs=164.8
Q ss_pred ccccceeeccCceEEEE-EEECCeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYK-GLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vyk-g~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV~Ey~~~ 605 (855)
|...+.||+|+||+||. +...+..||||++... ....+.+|+.+|.++ +|||||++++++. +..+||||||.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 44567899999999964 4556899999998753 245678999999987 8999999999984 45789999995
Q ss_pred CCHHHHhcccCCCC-C---CCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC-------------CcEEE
Q 003033 606 GSLEDRLSCKDNSP-P---LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-------------FVSKL 668 (855)
Q Consensus 606 GsL~~~L~~~~~~~-~---l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~-------------~~~KL 668 (855)
|+|.+++....... . .++..+..|+.||+.||.|||+ ++|+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 79999996432211 1 1233457899999999999999 799999999999999654 58999
Q ss_pred eeccccc------------------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHH
Q 003033 669 SDFEFLA------------------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA 711 (855)
Q Consensus 669 ~DFg~~~------------------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~ 711 (855)
+|||+.. ...++.++|||||||++|||+| |++||+........
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~ 249 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH
Confidence 9997431 1457788999999999999999 99999755433322
Q ss_pred HhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 712 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 712 ~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+..+... .+......+...+..+.+|+.+||+.||.+||++ .+++
T Consensus 250 i~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-~eil 294 (434)
T 2rio_A 250 IIRGIFS--LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA-MKVL 294 (434)
T ss_dssp HHHTCCC--CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred HhcCCCC--cccccccccccchHHHHHHHHHHhhCChhhCCCH-HHHH
Confidence 2222211 1111112234567889999999999999999999 5664
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=309.25 Aligned_cols=223 Identities=25% Similarity=0.340 Sum_probs=169.3
Q ss_pred hhcccCCccccceeeccCceE-EEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEE
Q 003033 523 IEGATHNFDPSLKIGEGGYGS-IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTL 598 (855)
Q Consensus 523 i~~~~~~f~~~~~LG~G~fG~-Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~L 598 (855)
+.....+|.....||+|+||. ||++...++.||||++... ....+.+|+.+|+.+ +|||||++++++. ...+|
T Consensus 19 ~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp EEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred EEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 344455799999999999998 5666777899999999753 234577999999999 7999999999984 45789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-----CCcEEEeeccc
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-----NFVSKLSDFEF 673 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-----~~~~KL~DFg~ 673 (855)
|||||. |+|.+++.... ..+.+.....|+.||+.||.|||+ ++|+||||||+|||++. ...+||+|||+
T Consensus 96 v~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 999995 69999996433 234445567899999999999999 79999999999999943 34688999985
Q ss_pred cc-------------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhccccccc
Q 003033 674 LA-------------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 674 ~~-------------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
.. ...++.++|||||||++|+|+| |.+||+...........+... .
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~--~ 247 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS--L 247 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCC--C
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCC--c
Confidence 31 2334668999999999999999 999997554333222221110 0
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+. ...+......+.+|+.+||+.||.+||++ .+|+
T Consensus 248 ~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~-~evl 282 (432)
T 3p23_A 248 DC--LHPEKHEDVIARELIEKMIAMDPQKRPSA-KHVL 282 (432)
T ss_dssp TT--SCTTCHHHHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred cc--cCccccccHHHHHHHHHHHhCCHhhCCCH-HHHH
Confidence 11 11123445678999999999999999999 6665
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=316.35 Aligned_cols=226 Identities=23% Similarity=0.305 Sum_probs=172.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--------Cce
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--------EVW 596 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~~~ 596 (855)
++|...++||+|+||.||+|... +..||||+++.... .....|.+|+.+|.+++||||+++++++. +..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 57999999999999999999875 68899999876422 12456889999999999999999999863 346
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCc---EEEeeccc
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV---SKLSDFEF 673 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---~KL~DFg~ 673 (855)
+|||||+++|+|.+++........+++..+..|+.+|+.||.|||+ ++|+||||||+|||++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 8999999999999999765555578999999999999999999999 79999999999999986654 99999974
Q ss_pred c------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh------------hccc
Q 003033 674 L------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD------------TGKL 717 (855)
Q Consensus 674 ~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~------------~~~~ 717 (855)
. .+..++.++|||||||++|+|+||.+||........... ....
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 3 234578899999999999999999999964322111000 0000
Q ss_pred cccc-----CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHH
Q 003033 718 KNLL-----DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 757 (855)
Q Consensus 718 ~~~~-----d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~e 757 (855)
...+ .+....++...+..+.+|+.+||..||.+||++ .+
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa-~e 294 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTD-PQ 294 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CC-TT
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCH-HH
Confidence 0000 011223445578899999999999999999998 44
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=317.56 Aligned_cols=216 Identities=25% Similarity=0.305 Sum_probs=173.4
Q ss_pred cCCccccceeeccCceEEEEEEEC---CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceecC--c-----
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE--V----- 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~--~----- 595 (855)
.++|.+...||+|+||.||+|.+. ++.||||++..... .....|.+|+.+|.+++|||||+++++|.. .
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 468999999999999999999885 58899999875432 223568899999999999999999999842 2
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.||||||+++|+|.+++.. .++|..++.|+.||+.||.|||+ ++||||||||+|||++.+ .+||+|||+..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccch
Confidence 5899999999999987732 69999999999999999999999 899999999999999875 89999998542
Q ss_pred c--------------------CCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC-hhhHH
Q 003033 676 S--------------------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP-FVQAE 734 (855)
Q Consensus 676 ~--------------------~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p-~~~~~ 734 (855)
. +.++.++|||||||+||+|++|.+||.... .+......+ ...+.
T Consensus 230 ~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~--------------~~~~~~~~~~~~~~~ 295 (681)
T 2pzi_A 230 RINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRY--------------VDGLPEDDPVLKTYD 295 (681)
T ss_dssp ETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEE--------------CSSCCTTCHHHHHCH
T ss_pred hcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccc--------------cccccccccccccCH
Confidence 1 123678999999999999999999985311 111111111 12346
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+.+|+.+||+.||.+||+..+++...|..+
T Consensus 296 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 296 SYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 7999999999999999998878888877765
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=299.46 Aligned_cols=221 Identities=13% Similarity=0.133 Sum_probs=165.0
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC---ChhhHHHHHHHHHhcCC-CcceeE-------
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRH-PNLVTL------- 588 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~H-pnIV~l------- 588 (855)
++...+.+|...+.||+|+||.||+|.+. +..||||++...... ..+.|.+|+.++..++| +|...+
T Consensus 72 ~~~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~ 151 (413)
T 3dzo_A 72 ELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI 151 (413)
T ss_dssp SSSSCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBC
T ss_pred cCCCCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccc
Confidence 34445566888899999999999999987 789999999844322 35779999999999987 322111
Q ss_pred --------------ecee-------cCceEEEEEecCCCCHHHHhcc----cCCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 003033 589 --------------VGAC-------PEVWTLVYEYLPNGSLEDRLSC----KDNSPPLSWQTRIRIATELCSVLIFLHSC 643 (855)
Q Consensus 589 --------------~g~~-------~~~~~LV~Ey~~~GsL~~~L~~----~~~~~~l~~~~~~~i~~qia~aL~yLH~~ 643 (855)
+.++ ....+++|+++ +|+|.+++.. ......+++..++.|+.||+.||.|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~- 229 (413)
T 3dzo_A 152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH- 229 (413)
T ss_dssp CCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 1111 11245677765 7899998831 1223468899999999999999999999
Q ss_pred CCCCceecccccCceeeCCCCcEEEeecccc-------------------------------ccCCCCcchhHHHHHHHH
Q 003033 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFL-------------------------------ASGELTPKSDVYSFGIIL 692 (855)
Q Consensus 644 ~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------------------------------~~~~~t~ksDVwSfGvvl 692 (855)
++||||||||+||||+.++.+||+|||++ ....++.++|||||||++
T Consensus 230 --~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 230 --YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp --TTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred --CCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 89999999999999999999999999863 222356699999999999
Q ss_pred HHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 693 LRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 693 ~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
|+|+||+.||....... ....++. .++ ..+..+.+|+.+||+.||.+||++ .++
T Consensus 308 ~elltg~~Pf~~~~~~~------~~~~~~~----~~~-~~~~~~~~li~~~l~~dP~~Rpt~-~~~ 361 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALG------GSEWIFR----SCK-NIPQPVRALLEGFLRYPKEDRLLP-LQA 361 (413)
T ss_dssp HHHHHSSCCCCTTGGGS------CSGGGGS----SCC-CCCHHHHHHHHHHTCSSGGGSCCH-HHH
T ss_pred HHHHHCCCCCCCcchhh------hHHHHHh----hcc-cCCHHHHHHHHHHccCChhhCcCH-HHH
Confidence 99999999997544211 1111111 111 234779999999999999999997 444
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=283.17 Aligned_cols=219 Identities=19% Similarity=0.197 Sum_probs=164.1
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCC--------ChhhHHHHHHHHHhcC---------CCcceeEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--------GPSEFQQEIDILSKIR---------HPNLVTLV 589 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--------~~~~f~~Ei~iL~~l~---------HpnIV~l~ 589 (855)
.++|...+.||+|+||.||+|...+..||||++...... ....+.+|+.+|+.++ |||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 356889999999999999999999999999999865321 2367899999999986 66666665
Q ss_pred ce-----------------e---------------cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 003033 590 GA-----------------C---------------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637 (855)
Q Consensus 590 g~-----------------~---------------~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL 637 (855)
+. + .+..+||||||++|++.+.+.. ..+++..+..|+.||+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 54 2 3468999999999987766632 4589999999999999999
Q ss_pred HHHh-hcCCCCceecccccCceeeCCCC--------------------cEEEeeccccc-------------------cC
Q 003033 638 IFLH-SCKPHSIVHGDLKPANILLDANF--------------------VSKLSDFEFLA-------------------SG 677 (855)
Q Consensus 638 ~yLH-~~~~~~IvHrDLKp~NILld~~~--------------------~~KL~DFg~~~-------------------~~ 677 (855)
.||| + ++||||||||+||||+.++ .+||+|||+.. .+
T Consensus 175 ~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 175 AVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCC
T ss_pred HHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcC
Confidence 9999 8 7999999999999999887 99999998532 12
Q ss_pred CCCcchhHHHHHHH-HHHHHhCCCCCCCchHHHHHHhhccccc--ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 678 ELTPKSDVYSFGII-LLRLLTGRPALGITKEVQYALDTGKLKN--LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 678 ~~t~ksDVwSfGvv-l~elltG~~pf~~~~~~~~~~~~~~~~~--~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..+.++||||||++ .+++++|.+||....+....... .+.. .........+...+.++.+|+.+||+.| |+
T Consensus 252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa 325 (336)
T 2vuw_A 252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDK-MLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SA 325 (336)
T ss_dssp CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHH-HHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHh-hhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence 33778999998777 77889999999543322211111 0000 0011111122356788999999999976 66
Q ss_pred HHHHH
Q 003033 755 GKDVW 759 (855)
Q Consensus 755 ~~evl 759 (855)
.+++
T Consensus 326 -~e~l 329 (336)
T 2vuw_A 326 -TDLL 329 (336)
T ss_dssp -HHHH
T ss_pred -HHHH
Confidence 5554
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-23 Score=242.53 Aligned_cols=159 Identities=21% Similarity=0.216 Sum_probs=117.2
Q ss_pred eeccCceEEEEEE--ECCeEEEEEEecCCCCCC----------hhhHHHHHHHHHhc-CCCcceeEeceecC--ceEEEE
Q 003033 536 IGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQG----------PSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLVY 600 (855)
Q Consensus 536 LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~----------~~~f~~Ei~iL~~l-~HpnIV~l~g~~~~--~~~LV~ 600 (855)
++.|++|.+..+. +-+..||||++....... .++|.+|+++|+++ .|+||+++++++.+ ..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455555544332 236779999997653221 24699999999999 69999999999954 689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc---C
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS---G 677 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~---~ 677 (855)
||++||+|.++|... .+++.. +|+.||+.||.|||+ +|||||||||+||||+.+|++||+|||++.. .
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999533 456653 588999999999999 8999999999999999999999999998653 2
Q ss_pred CCCcchhHHHHHHHHHHHHhCCCCCC
Q 003033 678 ELTPKSDVYSFGIILLRLLTGRPALG 703 (855)
Q Consensus 678 ~~t~ksDVwSfGvvl~elltG~~pf~ 703 (855)
.....+++|++|.+..|+++|+.++.
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~~~~~ 418 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAENKSWN 418 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC-------
T ss_pred CccccCceechhhccHHHhCCCCCCc
Confidence 33456889999999999999876653
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-21 Score=227.53 Aligned_cols=130 Identities=18% Similarity=0.251 Sum_probs=105.2
Q ss_pred cccceeeccCceEEEEEEECCeEEEEEEecCCCCCC--------hhhHHHHHHHHHhcCCCcce--eEeceecCceEEEE
Q 003033 531 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNLV--TLVGACPEVWTLVY 600 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l~HpnIV--~l~g~~~~~~~LV~ 600 (855)
...++||+|+||.||+|...+..+++|......... .+.|.+|+.+|++++||||+ .+++...+..+|||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 446689999999999998888999999976543322 23478999999999999999 66777677889999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccccc
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLAS 676 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~ 676 (855)
||+++|+|.+++.. +..|+.||+.||.|||+ ++|+||||||+|||++. .+||+|||+...
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 99999999999842 45789999999999999 89999999999999998 999999997543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.6e-20 Score=198.19 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=109.5
Q ss_pred hcccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC------------------ChhhHHHHHHHHHhcCCCc
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ------------------GPSEFQQEIDILSKIRHPN 584 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~------------------~~~~f~~Ei~iL~~l~Hpn 584 (855)
......|...+.||+|+||.||+|.+. +..||||+++..... ....|.+|+.+|++++|
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~-- 163 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-- 163 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC--
Confidence 344556777799999999999999985 689999999754221 13458899999999994
Q ss_pred ceeEecee-cCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC
Q 003033 585 LVTLVGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663 (855)
Q Consensus 585 IV~l~g~~-~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 663 (855)
+.+++++ .+..++||||++||+|.+ +.. .....++.||+.||.|||+ ++|+||||||+|||++ +
T Consensus 164 -~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 164 -LAVPKVYAWEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp -SSSCCEEEEETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-T
T ss_pred -CCcCeEEeccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-C
Confidence 5555544 345799999999999988 521 1234699999999999999 8999999999999999 9
Q ss_pred CcEEEeeccccccC
Q 003033 664 FVSKLSDFEFLASG 677 (855)
Q Consensus 664 ~~~KL~DFg~~~~~ 677 (855)
+.+||+|||++...
T Consensus 229 ~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 229 EGIWIIDFPQSVEV 242 (282)
T ss_dssp TEEEECCCTTCEET
T ss_pred CcEEEEECCCCeEC
Confidence 99999999987643
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=183.95 Aligned_cols=135 Identities=14% Similarity=0.040 Sum_probs=104.2
Q ss_pred ccccceeeccCceEEEEEEE--CCeE--EEEEEecCCCCCC------------------------hhhHHHHHHHHHhcC
Q 003033 530 FDPSLKIGEGGYGSIYKGLL--RHMQ--VAIKMLHPHSLQG------------------------PSEFQQEIDILSKIR 581 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~--~~~~--VAvK~l~~~~~~~------------------------~~~f~~Ei~iL~~l~ 581 (855)
|.....||+|+||.||+|.. .+.. ||||+++...... ...+.+|+.+|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56678899999999999988 6788 9999986542111 025789999999998
Q ss_pred CCcc--eeEeceecCceEEEEEecCC-C----CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCceeccc
Q 003033 582 HPNL--VTLVGACPEVWTLVYEYLPN-G----SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDL 653 (855)
Q Consensus 582 HpnI--V~l~g~~~~~~~LV~Ey~~~-G----sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~IvHrDL 653 (855)
|+++ ..+++. +..+|||||+.+ | +|.++... +++.....++.||+.||.||| . .+||||||
T Consensus 129 ~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSSC
T ss_pred hCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCCC
Confidence 8764 333432 467899999942 4 67766521 223456789999999999999 7 79999999
Q ss_pred ccCceeeCCCCcEEEeeccccccC
Q 003033 654 KPANILLDANFVSKLSDFEFLASG 677 (855)
Q Consensus 654 Kp~NILld~~~~~KL~DFg~~~~~ 677 (855)
||+|||++. .++|+|||++...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 8999999987543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-15 Score=168.26 Aligned_cols=140 Identities=15% Similarity=0.222 Sum_probs=96.3
Q ss_pred cccCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC-----C---------hhhHH--------HHHHHHHhcC
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-----G---------PSEFQ--------QEIDILSKIR 581 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~-----~---------~~~f~--------~Ei~iL~~l~ 581 (855)
....-|.+...||.|+||.||+|... ++.||||+++..... . ...+. +|...|.++.
T Consensus 92 ~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~ 171 (397)
T 4gyi_A 92 ARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY 171 (397)
T ss_dssp HTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 33345889999999999999999875 689999998653110 0 11122 3455555554
Q ss_pred CCcceeEeceecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC
Q 003033 582 HPNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 661 (855)
Q Consensus 582 HpnIV~l~g~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld 661 (855)
++++....-+.....+|||||++|++|..+.. . .....++.||+.+|.|||. .|||||||||.|||++
T Consensus 172 ~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~-------~--~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 172 EEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS-------V--PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIR 239 (397)
T ss_dssp HTTCSCCCEEEEETTEEEEECCSCEEGGGCCC-------C--SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE
T ss_pred hcCCCCCeeeeccCceEEEEecCCccHhhhcc-------c--HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEe
Confidence 33321111111123479999999988876542 1 1234678999999999999 7999999999999998
Q ss_pred CCC----------cEEEeecccccc
Q 003033 662 ANF----------VSKLSDFEFLAS 676 (855)
Q Consensus 662 ~~~----------~~KL~DFg~~~~ 676 (855)
.++ .+.|+||+.+-.
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCCcccccccccceEEEEeCCccc
Confidence 776 488999975443
|
| >1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.3e-13 Score=121.11 Aligned_cols=72 Identities=29% Similarity=0.498 Sum_probs=67.8
Q ss_pred CCCCCCcCCCcchhcccCCCcccCC-ccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADG-FTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg-~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...|..|.|||..++|.||+++.+| ++|++.+|..|+.. +.+||+|+.+|.+..|+||++||..|++|+.++
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~~~~ 89 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 89 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCCTTTSEECHHHHHHHHHHHHHS
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-CCCCCCCCCCCChhhceEcHHHHHHHHHHHHHc
Confidence 4568899999999999999999999 99999999999986 679999999999999999999999999999764
|
| >2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B | Back alignment and structure |
|---|
Probab=99.38 E-value=2.9e-13 Score=122.67 Aligned_cols=72 Identities=24% Similarity=0.444 Sum_probs=68.0
Q ss_pred CCCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...|..|.|||..++|.||+++.+|++|++.+|..|+.. +.+||+|+.+|....|+||++||..|++|+.+|
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~~~~ 95 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-SPTDPFNRQTLTESMLEPVPELKEQIQAWMREK 95 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-CSBCSSSCCBCCTTSSEECHHHHHHHHHHHHTT
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-CCCCCCCCCCCChhhceECHHHHHHHHHHHHHh
Confidence 456889999999999999999999999999999999984 789999999999999999999999999999865
|
| >2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.6e-13 Score=120.72 Aligned_cols=72 Identities=24% Similarity=0.435 Sum_probs=67.5
Q ss_pred CCCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...|..|.|||..++|.||+++.+|++|++.+|..|+.. +.+||+|+..|....|+||++||++|++|+.++
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~~l~pn~~L~~~i~~~~~~~ 80 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-SPTDPFNRQMLTESMLEPVPELKEQIQAWMREK 80 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCCGGGCEECHHHHHHHHHHHHHH
T ss_pred hcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-CCCCCCCcCCCChHhcchHHHHHHHHHHHHHHh
Confidence 456889999999999999999999999999999999985 789999999999999999999999999999763
|
| >2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-13 Score=133.62 Aligned_cols=73 Identities=30% Similarity=0.593 Sum_probs=68.4
Q ss_pred CCCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...|..|.|||+.++|.||+++.+|++|++.+|..|+..++.+||+|+.+|.+..|+||++||++|++|+.+|
T Consensus 101 ~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN~~Lk~~Ie~~~~~~ 173 (179)
T 2f42_A 101 REIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQEN 173 (179)
T ss_dssp CCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECHHHHHHHHHHHHHC
T ss_pred cCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcchHHHHHHHHHHHHHC
Confidence 4568999999999999999999999999999999999875558999999999999999999999999999875
|
| >3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A | Back alignment and structure |
|---|
Probab=99.28 E-value=8.5e-13 Score=158.72 Aligned_cols=72 Identities=26% Similarity=0.479 Sum_probs=68.2
Q ss_pred CCCCCCcCCCcchhcccCCCcccCC-ccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADG-FTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg-~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
..+|.+|.|||+.++|.||+++++| +|||+.+|++|+.+ +.+||+|+.+|.+.+|+||++||++|++||.++
T Consensus 886 ~~iP~~F~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~~-~~tdP~Tr~~L~~~~liPN~~Lk~~I~~w~~~~ 958 (968)
T 3m62_A 886 GDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLS-DSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK 958 (968)
T ss_dssp CCSCGGGBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCCGGGCEECHHHHHHHHHHHHHH
T ss_pred cCCcHHhCCcchhhHHhCCeEcCCCCEEECHHHHHHHHhc-CCCCCCCCCCCCcccccccHHHHHHHHHHHHHH
Confidence 5789999999999999999999997 79999999999998 789999999999999999999999999999753
|
| >1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 | Back alignment and structure |
|---|
Probab=99.27 E-value=6e-11 Score=115.78 Aligned_cols=145 Identities=10% Similarity=0.172 Sum_probs=113.5
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEecCCC-----cccccCCCc--c-CCCCccHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVHTPA-----QMIPVMGTK--F-PASSLEEEKVQAYREIERQDM 114 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~-----~~ip~~~~~--~-p~~~~~~~~~~~~~~~~~~~~ 114 (855)
.+|.||||.+ ..|..||.||++... +..+.|+||..+. ...+..+.. + |. ..+....+.+..++..
T Consensus 6 ~~ILv~vD~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 81 (162)
T 1mjh_A 6 KKILYPTDFS-ETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKS---VEEFENELKNKLTEEA 81 (162)
T ss_dssp CEEEEECCSC-HHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC--------------------CHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC-HHHHHHHHHHHHHHhhcCCeEEEEEEecCccccccccccccccccccccc---hhhhHHHHHHHHHHHH
Confidence 5899999999 889999999998764 6789999998764 111110000 1 21 1112344566677888
Q ss_pred HHHHHHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEE
Q 003033 115 HNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIW 194 (855)
Q Consensus 115 ~~~l~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~ 194 (855)
++.|..+...|...+|+++..+.++ +++++|++++.+++++-||||+...+.+.+.+.+ .++.+|.++++ |.|+
T Consensus 82 ~~~l~~~~~~~~~~g~~~~~~v~~G-~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~G---Sv~~~vl~~~~--~pVl 155 (162)
T 1mjh_A 82 KNKMENIKKELEDVGFKVKDIIVVG-IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLG---SVTENVIKKSN--KPVL 155 (162)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEE-CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSC---HHHHHHHHHCC--SCEE
T ss_pred HHHHHHHHHHHHHcCCceEEEEcCC-CHHHHHHHHHHHcCCCEEEEcCCCCCCccceEec---chHHHHHHhCC--CCEE
Confidence 9999999999999999999988876 8999999999999999999999988888776665 69999999998 9999
Q ss_pred EEecC
Q 003033 195 FICNG 199 (855)
Q Consensus 195 ~i~kg 199 (855)
+|-.+
T Consensus 156 vv~~~ 160 (162)
T 1mjh_A 156 VVKRK 160 (162)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 99654
|
| >3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=6.4e-11 Score=113.26 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=114.2
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+ ..|..||.||++-. .+..+.|+||..+....+... ......+.+..++..++.|..+.
T Consensus 6 ~~ILv~~D~s-~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~ 75 (146)
T 3s3t_A 6 TNILVPVDSS-DAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPAL---------DPVLSELLDAEAAHAKDAMRQRQ 75 (146)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHHTCEEEEEEEEECCCCCCGGG---------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccccc---------ccccHHHHHHHHHHHHHHHHHHH
Confidence 6899999999 89999999999876 378999999987754322110 11334556667788999999999
Q ss_pred HHHhhcCc-eeEEEEeccCChhHHHHH-HHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGV-RAEKLDTESESTEKGILE-LISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V-~~~~~~ie~~dv~k~i~e-~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
..|...+| +++..+.++ +++++|++ ++.+++++-+|||+...+.+.+.+.+ .++.+|.+++| |.|++|
T Consensus 76 ~~~~~~g~~~~~~~~~~g-~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~G---s~~~~vl~~~~--~pVlvV 145 (146)
T 3s3t_A 76 QFVATTSAPNLKTEISYG-IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVG---STTSYVVDHAP--CNVIVI 145 (146)
T ss_dssp HHHTTSSCCCCEEEEEEE-CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSC---HHHHHHHHHCS--SEEEEE
T ss_pred HHHHhcCCcceEEEEecC-ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEc---chHHHHhccCC--CCEEEe
Confidence 99999999 999999888 89999999 99999999999999988888776665 69999999999 999997
|
| >2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-10 Score=114.87 Aligned_cols=143 Identities=17% Similarity=0.264 Sum_probs=105.7
Q ss_pred CeEEEEecCCcc---------hhHHHHHHHhhhc-C----CCeEEEEEecCCCcc-cccCCCccCCCCccHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVK---------ESKSVLLWALQNS-G----GKRICIIHVHTPAQM-IPVMGTKFPASSLEEEKVQAYREI 109 (855)
Q Consensus 45 ~~v~VAV~~~~~---------~s~~al~WAl~~~-~----~~~~~lvHV~~~~~~-ip~~~~~~p~~~~~~~~~~~~~~~ 109 (855)
.+|.||||.+ . .|..||.||++.+ . +..+.||||..+... ....+. .....+....+.+.
T Consensus 6 ~~ILv~vD~s-~~~~~~~~~~~s~~al~~a~~la~~~~~~~a~l~ll~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 80 (175)
T 2gm3_A 6 TKVMVAVNAS-TIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDS----IYASPEDFRDMRQS 80 (175)
T ss_dssp EEEEEECCBC-SSSCTTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC----------C----CCCSHHHHHHHTTS
T ss_pred cEEEEEECCC-cccccccccHHHHHHHHHHHHHhhcccCCCCEEEEEEEeeccccccccccc----ccCCHHHHHHHHHH
Confidence 5899999999 7 8999999999976 2 568999999865321 110011 01234444455555
Q ss_pred HHHHHHHHHHHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCC
Q 003033 110 ERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPA 189 (855)
Q Consensus 110 ~~~~~~~~l~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~ 189 (855)
.+...++.|..+...|...+|.++..+.++ +++++|++++.+++++-+|||+...+.+.+.+.+ .++..|.++++
T Consensus 81 ~~~~~~~~l~~~~~~~~~~g~~~~~~v~~G-~~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~G---sva~~vl~~a~- 155 (175)
T 2gm3_A 81 NKAKGLHLLEFFVNKCHEIGVGCEAWIKTG-DPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVG---TVSAFCVKHAE- 155 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEEEES-CHHHHHHHHHHHHCCSEEEEEECCCC-----------CHHHHHHHHCS-
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEecC-CHHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcC---chHHHHHhCCC-
Confidence 566778899999999999999999888877 8999999999999999999999988888777765 69999999999
Q ss_pred CCeEEEEec
Q 003033 190 SCHIWFICN 198 (855)
Q Consensus 190 ~C~v~~i~k 198 (855)
|.|++|..
T Consensus 156 -~pVlvv~~ 163 (175)
T 2gm3_A 156 -CPVMTIKR 163 (175)
T ss_dssp -SCEEEEEC
T ss_pred -CCEEEEcC
Confidence 99999964
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=3.4e-11 Score=126.92 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=116.2
Q ss_pred CCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceec--CceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
.+|.....+|.|+++.||+....+..+++|+...........+.+|+.+|..+. +.++.++++++. +..++||||++
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred ccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 457777778888999999988778899999987543234457999999999995 667778887763 45789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK---------------------------------------- 644 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------- 644 (855)
|.+|.+.+. +......++.+++.+|..||+..
T Consensus 94 G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 94 GVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred CeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 999987641 11123467889999999999821
Q ss_pred ----------------CCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHH
Q 003033 645 ----------------PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRL 695 (855)
Q Consensus 645 ----------------~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~el 695 (855)
+..++|+|++|.|||++.+..+.|+|||.+..+. -.|-|+.++..+
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd-----~~~Dla~~~~~~ 227 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRAD-----KWYDIAFCVRSI 227 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEEE-----HHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccCC-----HHHHHHHHHHHh
Confidence 1458999999999999876667899998765432 134556555443
|
| >3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=5.6e-11 Score=113.70 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=110.1
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+ ..|..||.||++.. .+..+.++||.++...........+... ...+.+..+...++.|..+.
T Consensus 3 ~~ILv~vD~s-~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~ 76 (147)
T 3hgm_A 3 NRIMVPVDGS-KGAVKALEKGVGLQQLTGAELYILCVFKHHSLLEASLSMARPEQ-----LDIPDDALKDYATEIAVQAK 76 (147)
T ss_dssp SEEEEECCSB-HHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHTBSSCCCGG-----GCCCTTHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccccccccChhh-----hhhHHHHHHHHHHHHHHHHH
Confidence 5899999999 89999999999965 3789999999887541111111111111 11123345577888999999
Q ss_pred HHHhhcCcee---EEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGVRA---EKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V~~---~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
..|...+|.+ +..+.++ +++++|++++.+++++-+|||+..++.+.+.+.+ .++..|.+++| |.|++|
T Consensus 77 ~~~~~~g~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~G---s~~~~vl~~~~--~pVlvV 147 (147)
T 3hgm_A 77 TRATELGVPADKVRAFVKGG-RPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLG---SVAQRVAGSAH--CPVLVV 147 (147)
T ss_dssp HHHHHTTCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCC---HHHHHHHHHCS--SCEEEC
T ss_pred HHHHhcCCCccceEEEEecC-CHHHHHHHHHHHhCCCEEEEeCCCCccccceeec---cHHHHHHhhCC--CCEEEC
Confidence 9999999999 8877777 8999999999999999999999988877766655 68999999999 999986
|
| >3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=109.00 Aligned_cols=132 Identities=13% Similarity=0.145 Sum_probs=108.3
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc---CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHH-HHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS---GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIER-QDMHNHLDM 120 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~---~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~l~~ 120 (855)
.+|.||||.+ +.|..||.||++-. .+..+.++||..+....+..+ .....+.+..+ ...++.|..
T Consensus 2 ~~ILv~~D~s-~~s~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~ 70 (138)
T 3idf_A 2 KKLLFAIDDT-EACERAAQYILDMFGKDADCTLTLIHVKPEFMLYGEAV----------LAAYDEIEMKEEEKAKLLTQK 70 (138)
T ss_dssp EEEEEECCSS-HHHHHHHHHHHHHHTTCTTEEEEEEEEECCCCCCHHHH----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC-HHHHHHHHHHHHHhccCCCCEEEEEEEecCCCcccccc----------cCcHHHHHHHHHHHHHHHHHH
Confidence 3789999999 89999999999987 377899999988764221111 11112344445 788899999
Q ss_pred HHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 121 y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
+...|...+++++..+.++ +++++|++++. +++-+|||+...+.+.+.+ + .++..|.+++| |.|++|
T Consensus 71 ~~~~~~~~g~~~~~~v~~g-~~~~~I~~~a~--~~dliV~G~~~~~~~~~~~-G---s~~~~vl~~~~--~pVlvv 137 (138)
T 3idf_A 71 FSTFFTEKGINPFVVIKEG-EPVEMVLEEAK--DYNLLIIGSSENSFLNKIF-A---SHQDDFIQKAP--IPVLIV 137 (138)
T ss_dssp HHHHHHTTTCCCEEEEEES-CHHHHHHHHHT--TCSEEEEECCTTSTTSSCC-C---CTTCHHHHHCS--SCEEEE
T ss_pred HHHHHHHCCCCeEEEEecC-ChHHHHHHHHh--cCCEEEEeCCCcchHHHHh-C---cHHHHHHhcCC--CCEEEe
Confidence 9999999999999998888 79999999999 9999999999888887766 6 58999999999 999997
|
| >1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 | Back alignment and structure |
|---|
Probab=99.11 E-value=4.2e-10 Score=110.70 Aligned_cols=138 Identities=11% Similarity=0.119 Sum_probs=105.1
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhhc-CCCeEEEE--EecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQNS-GGKRICII--HVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~~-~~~~~~lv--HV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
-.+|.||||.+ ..|..||.||++.. .+..+.|| ||..+.... .+..++ ...+.+..++..++.|..
T Consensus 17 ~~~ILv~vD~s-~~s~~al~~A~~lA~~~a~l~ll~a~v~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~l~~ 85 (163)
T 1tq8_A 17 YKTVVVGTDGS-DSSMRAVDRAAQIAGADAKLIIASAYLPQHEDAR--AADILK--------DESYKVTGTAPIYEILHD 85 (163)
T ss_dssp CCEEEEECCSS-HHHHHHHHHHHHHHTTTSEEEEEEECCC------------------------------CCTHHHHHHH
T ss_pred CCEEEEEcCCC-HHHHHHHHHHHHHhCCCCEEEEEEeeeccCcccc--cccccc--------cHHHHHHHHHHHHHHHHH
Confidence 36899999999 89999999999876 47789999 776554310 111001 112333345567889999
Q ss_pred HHHHHhhcCce-eEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 121 CLLICRQMGVR-AEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 121 y~~~C~~~~V~-~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
+...|...+|. ++..+.++ +++++|++++.+.+++-||||+...+.+.+.+.+ .++..|.+++| |.|++|..
T Consensus 86 ~~~~~~~~gv~~v~~~v~~G-~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lG---Sva~~vl~~a~--~PVlvV~~ 158 (163)
T 1tq8_A 86 AKERAHNAGAKNVEERPIVG-APVDALVNLADEEKADLLVVGNVGLSTIAGRLLG---SVPANVSRRAK--VDVLIVHT 158 (163)
T ss_dssp HHHHHHTTTCCEEEEEEECS-SHHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTB---BHHHHHHHHTT--CEEEEECC
T ss_pred HHHHHHHcCCCeEEEEEecC-CHHHHHHHHHHhcCCCEEEECCCCCCcccceeec---cHHHHHHHhCC--CCEEEEeC
Confidence 99999989998 99888887 8999999999999999999999988888887776 69999999999 99999953
|
| >3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-09 Score=106.16 Aligned_cols=135 Identities=19% Similarity=0.232 Sum_probs=109.7
Q ss_pred CCeEEEEec--CCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVA--KQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119 (855)
Q Consensus 44 ~~~v~VAV~--~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 119 (855)
-.+|.|||| .+ ..|..||.||++-. .+..+.|+||..+..... .++ +.+ .+.+..++..++.|.
T Consensus 15 ~~~ILv~vD~~~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~-~~~------~~~----~~~~~~~~~~~~~l~ 82 (156)
T 3fg9_A 15 YRRILLTVDEDDN-TSSERAFRYATTLAHDYDVPLGICSVLESEDINI-FDS------LTP----SKIQAKRKHVEDVVA 82 (156)
T ss_dssp CC-EEEECCSCCC-HHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTC-CCS------SHH----HHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccc-ccc------CCH----HHHHHHHHHHHHHHH
Confidence 368999999 88 89999999999865 378999999988754211 111 122 345566778889999
Q ss_pred HHHHHHhhcCc-eeEEEEeccCChhHHHHHH-HHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 120 MCLLICRQMGV-RAEKLDTESESTEKGILEL-ISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 120 ~y~~~C~~~~V-~~~~~~ie~~dv~k~i~e~-i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
.+...+...++ .++..+.++.+++++|+++ +.+++++-+|||+..++.+. .+.+ .++..|.+++| |.|++|
T Consensus 83 ~~~~~~~~~g~~~~~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~-~~~G---s~~~~vl~~a~--~PVlvV 155 (156)
T 3fg9_A 83 EYVQLAEQRGVNQVEPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFPHS-KIAG---AIGPRLARKAP--ISVIVV 155 (156)
T ss_dssp HHHHHHHHHTCSSEEEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCTTS-SSCS---CHHHHHHHHCS--SEEEEE
T ss_pred HHHHHHHHcCCCceEEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCccc-eeec---chHHHHHHhCC--CCEEEe
Confidence 99999999999 4888888856999999999 99999999999999888875 3554 58999999999 999997
|
| >2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-11 Score=109.05 Aligned_cols=71 Identities=30% Similarity=0.478 Sum_probs=64.1
Q ss_pred CCCCcCCCcchhcccCCCccc-CCccchHHhhhhhccCC-----CCCCCCcCCC---CCCCCCCCcHHHHHHHHHHHhhC
Q 003033 785 PPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSG-----HETSPMTNLP---LAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 785 ~P~~f~CPI~qEvm~dP~ia~-dg~tye~~ai~~wl~sg-----~~~sp~T~~~---l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
.+..|.|||..++|.||+++. +|++|++.+|..|+..+ ..+||+|+.+ |....|+||++|+..|++|+.++
T Consensus 4 ~~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~L~~~I~~~~~~~ 83 (94)
T 2yu4_A 4 GSSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEALRRAIENHNKKR 83 (94)
T ss_dssp CSSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHHHHHHHHHHHTTC
T ss_pred CCcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHHHHHHHHHHHHHh
Confidence 467799999999999999995 99999999999999864 4699998887 99999999999999999998763
|
| >2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.08 E-value=6.3e-10 Score=109.47 Aligned_cols=146 Identities=6% Similarity=0.039 Sum_probs=107.3
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEecCCCcccccCCCccCCCCcc-HHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVHTPAQMIPVMGTKFPASSLE-EEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~~~ip~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~l~~y 121 (855)
.+|.||||.+ ..|..||.||++-.. +..+.||||..+.... ..+..+|..-.. ......+.+..++..++.|..+
T Consensus 6 ~~ILv~vD~s-~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 83 (170)
T 2dum_A 6 RKVLFPTDFS-EGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLE-ELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEK 83 (170)
T ss_dssp SEEEEECCSS-HHHHHHHHHHHHHCCSCCSEEEEEEEEETTGGG-CCC------------CCTTSHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCC-HHHHHHHHHHHHHHHhcCCEEEEEEEecCcccc-ccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 5899999999 889999999998773 6789999998664311 111111100000 0000112334556778899999
Q ss_pred HHHHhhcCceeEE--EEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 122 LLICRQMGVRAEK--LDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 122 ~~~C~~~~V~~~~--~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
...|...+|+++. .+.++ +++++|++++.+++++-+|||+...+.+.+.+.+ .++..|.++++ |.|++|-.
T Consensus 84 ~~~~~~~g~~~~~~~~~~~g-~~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~G---sv~~~vl~~~~--~PVlvv~~ 156 (170)
T 2dum_A 84 AEEVKRAFRAKNVRTIIRFG-IPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLG---STVMRVLRKTK--KPVLIIKE 156 (170)
T ss_dssp HHHHHHHTTCSEEEEEEEEE-CHHHHHHHHHHHTTCSEEEEESCCCCC--TTCCC---HHHHHHHHHCS--SCEEEECC
T ss_pred HHHHHHcCCceeeeeEEecC-ChHHHHHHHHHHcCCCEEEECCCCCCccccceec---hHHHHHHHhCC--CCEEEEcc
Confidence 9999888999987 77766 8999999999999999999999988887776665 69999999999 99999964
|
| >3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.3e-09 Score=104.51 Aligned_cols=127 Identities=18% Similarity=0.220 Sum_probs=104.8
Q ss_pred CCeEEEEecC-CcchhHHHHHHHhhhcC--CCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAK-QVKESKSVLLWALQNSG--GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 44 ~~~v~VAV~~-~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
-.+|.||||. + ..+..||.||++-.. +..+.||||..+.. +. . ...+...++.|..
T Consensus 24 ~~~ILv~vD~~s-~~s~~al~~A~~la~~~~a~l~llhV~~~~~---------~~---~--------~~~~~~~~~~l~~ 82 (155)
T 3dlo_A 24 YMPIVVAVDKKS-DRAERVLRFAAEEARLRGVPVYVVHSLPGGG---------RT---K--------DEDIIEAKETLSW 82 (155)
T ss_dssp CCCEEEECCSSS-HHHHHHHHHHHHHHHHHTCCEEEEEEECCST---------TS---C--------HHHHHHHHHHHHH
T ss_pred cCeEEEEECCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEEcCCC---------cc---c--------HHHHHHHHHHHHH
Confidence 4689999999 7 899999999998763 77999999987542 11 1 2234567888999
Q ss_pred HHHHHhhcCceeEEE-EeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 121 CLLICRQMGVRAEKL-DTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 121 y~~~C~~~~V~~~~~-~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
+...+...++.++.. .+...+++++|++++.+++++-||||+...+.+.+.+.+ .++..|.+++| |.|++|
T Consensus 83 ~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lG---Sv~~~vl~~a~--~PVLvV 154 (155)
T 3dlo_A 83 AVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFG---SVARDVILKAN--KPVICI 154 (155)
T ss_dssp HHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEECTTSCEECC---HHHHHHHHHCS--SCEEEE
T ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCCCCCCCEEec---cHHHHHHHhCC--CCEEEe
Confidence 999999999888763 356669999999999999999999999988777766655 68999999999 999997
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.02 E-value=9.3e-11 Score=125.34 Aligned_cols=73 Identities=27% Similarity=0.583 Sum_probs=69.1
Q ss_pred CCCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...|..|.|||..++|.||++..+|+||++.+|..|+..++.+||+|+.++....|+||++||..|++|+.+|
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~l~~~i~~~~~~~ 275 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFISEN 275 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHTTC
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHHHHHHHHHHHHHC
Confidence 5678999999999999999999999999999999999987778999999999999999999999999999875
|
| >2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-09 Score=102.57 Aligned_cols=131 Identities=18% Similarity=0.229 Sum_probs=98.4
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||+|.+ ..|..||.||++.. .+..+.++||..+... + ..+ + .++ .+.+..++..++.|..+.
T Consensus 3 ~~ILv~~D~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~-~-~~~-~-----~~~---~~~~~~~~~~~~~l~~~~ 70 (137)
T 2z08_A 3 KTILLAYDGS-EHARRAAEVAKAEAEAHGARLIVVHAYEPVPD-Y-LGE-P-----FFE---EALRRRLERAEGVLEEAR 70 (137)
T ss_dssp SEEEEECCSS-HHHHHHHHHHHHHHHHHTCEEEEEEEECC-------------------------CHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC-HHHHHHHHHHHHHHhhcCCEEEEEEEecCCCc-c-ccc-c-----chH---HHHHHHHHHHHHHHHHHH
Confidence 4799999999 89999999999876 3789999999875421 1 111 0 011 233344556677777765
Q ss_pred HHHhhcCc-eeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGV-RAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V-~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
.. .++ +++..+.++ +++++|++++.+++++-+|||+...+.+.+.+.+ .++..|.++++ |.|++|
T Consensus 71 ~~---~g~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~G---s~~~~vl~~~~--~pVlvv 136 (137)
T 2z08_A 71 AL---TGVPKEDALLLEG-VPAEAILQAARAEKADLIVMGTRGLGALGSLFLG---SQSQRVVAEAP--CPVLLV 136 (137)
T ss_dssp HH---HCCCGGGEEEEES-SHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSC---HHHHHHHHHCS--SCEEEE
T ss_pred HH---cCCCccEEEEEec-CHHHHHHHHHHHcCCCEEEECCCCCchhhhhhhc---cHHHHHHhcCC--CCEEEe
Confidence 54 688 888887776 8999999999999999999999988777666655 69999999998 999997
|
| >3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=102.97 Aligned_cols=134 Identities=12% Similarity=0.178 Sum_probs=96.3
Q ss_pred CeEEEEecCCcch--hHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKE--SKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 45 ~~v~VAV~~~~~~--s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
.+|.||||.+ .. |..||.||++-. .+..+.|+||..+....+..+...+. . ....++..++.+..
T Consensus 2 k~ILv~vD~s-~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~ 70 (143)
T 3fdx_A 2 NAILVPIDIS-DKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYASLGMAYTA------E----LPGMDELREGSETQ 70 (143)
T ss_dssp CEEEEECCTT-CSSCCTTHHHHHHHHHHHHTCEEEEEEEECC--------------------------CHHHHHHHHHHH
T ss_pred CEEEEEecCC-hHhhHHHHHHHHHHHHHhcCCeEEEEEEecCCcccccccccccc------h----hhhHHHHHHHHHHH
Confidence 4799999999 88 999999998865 47899999998876433222211110 0 11122344556666
Q ss_pred HHHHHhhcC---ceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 121 CLLICRQMG---VRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 121 y~~~C~~~~---V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
+..++.+.+ ++++..+.++ +++++|++++.+++++-+|||+. .+.+.+.+.+ .++..|.++++ |.|++|
T Consensus 71 l~~~~~~~~~~~~~v~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~-~~~~~~~~~G---s~~~~v~~~~~--~pVlvv 142 (143)
T 3fdx_A 71 LKEIAKKFSIPEDRMHFHVAEG-SPKDKILALAKSLPADLVIIASH-RPDITTYLLG---SNAAAVVRHAE--CSVLVV 142 (143)
T ss_dssp HHHHHTTSCCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEEESS-CTTCCSCSSC---HHHHHHHHHCS--SEEEEE
T ss_pred HHHHHHHcCCCCCceEEEEEec-ChHHHHHHHHHHhCCCEEEEeCC-CCCCeeeeec---cHHHHHHHhCC--CCEEEe
Confidence 677777765 4568888887 99999999999999999999998 4666655554 68999999999 999997
|
| >2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-11 Score=98.92 Aligned_cols=55 Identities=22% Similarity=0.412 Sum_probs=51.1
Q ss_pred CcCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHH
Q 003033 788 YFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 843 (855)
Q Consensus 788 ~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~ 843 (855)
.|.|||+.++|.||+++ .+|++||+++|++|+.. +.+||+|+.+|.+.+|+||+.
T Consensus 3 ~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~-~~~cP~t~~~L~~~~Lip~~~ 58 (61)
T 2bay_A 3 HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVEIVP 58 (61)
T ss_dssp -CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCCGGGCEECCC
T ss_pred eEEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHh-CCCCcCCcCCCChhhcEECcc
Confidence 58999999999999999 99999999999999986 568999999999999999975
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-09 Score=111.63 Aligned_cols=135 Identities=16% Similarity=0.136 Sum_probs=96.5
Q ss_pred CccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc--ceeEeceec--CceEEEEEec
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn--IV~l~g~~~--~~~~LV~Ey~ 603 (855)
+|......+.|.++.||+.... +..+++|+.... ....+.+|+.+|..+.+.+ +.++++++. +..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 3443323345566999998665 467999997653 3356889999999996544 455777764 3578999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK--------------------------------------- 644 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--------------------------------------- 644 (855)
+|.+|. .. ... ...++.+++..|..||...
T Consensus 98 ~G~~l~--~~------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 98 PGQDLL--SS------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp SSEETT--TS------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred CCcccC--cC------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 998884 21 111 2356778888888888742
Q ss_pred ----------------CCCceecccccCceeeCCCCcEEEeeccccccC
Q 003033 645 ----------------PHSIVHGDLKPANILLDANFVSKLSDFEFLASG 677 (855)
Q Consensus 645 ----------------~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~ 677 (855)
+..++|+|++|.|||++.++.+.|+|||.+..+
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988777789999986543
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=120.43 Aligned_cols=140 Identities=19% Similarity=0.290 Sum_probs=106.4
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEec--CCCC-CChhhHHHHHHHHHhcC--CCcceeEeceecCc-----eEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLH--PHSL-QGPSEFQQEIDILSKIR--HPNLVTLVGACPEV-----WTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~--~~~~-~~~~~f~~Ei~iL~~l~--HpnIV~l~g~~~~~-----~~LV~Ey 602 (855)
...|+.|.++.||+....+..+++|+.. .... .....+.+|+.+|..|. +..+.++++++.+. .++||||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 5678999999999988878889999876 4321 23457889999999997 45578888888543 7899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK-------------------------------------- 644 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-------------------------------------- 644 (855)
++|..+.+.. ...++...+..++.+++..|..||...
T Consensus 123 v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9998775422 134678888899999999999999731
Q ss_pred -----------------CCCceecccccCceeeCCCC--cEEEeeccccccC
Q 003033 645 -----------------PHSIVHGDLKPANILLDANF--VSKLSDFEFLASG 677 (855)
Q Consensus 645 -----------------~~~IvHrDLKp~NILld~~~--~~KL~DFg~~~~~ 677 (855)
+..++|+|++|.|||++.++ .+.|.|||....+
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 35799999999999998765 3689999976543
|
| >3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.8e-09 Score=101.42 Aligned_cols=137 Identities=18% Similarity=0.231 Sum_probs=93.1
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEecCCCccc-ccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVHTPAQMI-PVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~~~i-p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
.+|.||||.+ ..|..||.||++-.. +..+.|+||..+.... +..++..|...- .+.+..+++.++.|..+
T Consensus 7 ~~ILv~vD~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~ 79 (150)
T 3tnj_A 7 HHILLAVDFS-SEDSQVVQKVRNLASQIGARLSLIHVLDNIPMPDTPYGTAIPLDTE------TTYDAMLDVEKQKLSQI 79 (150)
T ss_dssp SEEEEECCCS-TTHHHHHHHHHHHHHHHTCEEEEEEEEC--------CTTCCCSSSC------CCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC-HHHHHHHHHHHHHHhhcCCEEEEEEEEcCccccccccccccCcCHH------HHHHHHHHHHHHHHHHH
Confidence 5899999999 899999999999763 7899999998775431 123333333211 12233445556666655
Q ss_pred HHHHhhcCcee-EEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 122 LLICRQMGVRA-EKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 122 ~~~C~~~~V~~-~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
|.+.++.+ +..+.++ +++++|++++.+++++-+|||+...+.+. .+.+ .++..|.++++ |.|++|..
T Consensus 80 ---~~~~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~~~~~-~~~G---s~~~~vl~~~~--~pVlvv~~ 147 (150)
T 3tnj_A 80 ---GNTLGIDPAHRWLVWG-EPREEIIRIAEQENVDLIVVGSHGRHGLA-LLLG---STANSVLHYAK--CDVLAVRL 147 (150)
T ss_dssp ---HHHHTCCGGGEEEEES-CHHHHHHHHHHHTTCSEEEEEEC---------CC---CHHHHHHHHCS--SEEEEEEC
T ss_pred ---HHHcCCCcceEEEecC-CHHHHHHHHHHHcCCCEEEEecCCCCCcC-eEec---chHHHHHHhCC--CCEEEEeC
Confidence 44457774 5555555 99999999999999999999999887776 5555 68999999999 99999853
|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 | Back alignment and structure |
|---|
Probab=98.86 E-value=1e-09 Score=94.37 Aligned_cols=72 Identities=43% Similarity=0.845 Sum_probs=68.2
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
..|..+.|||..++|.||++...|++|.+..|..|+..++.+||+++..+....|+||++|++.|++|+.+|
T Consensus 4 ~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n~~l~~~i~~~~~~~ 75 (78)
T 1t1h_A 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESN 75 (78)
T ss_dssp CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHHHHS
T ss_pred CCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccCHHHHHHHHHHHHHc
Confidence 467889999999999999999999999999999999988899999999999999999999999999999875
|
| >1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.4e-08 Score=96.44 Aligned_cols=133 Identities=17% Similarity=0.193 Sum_probs=94.4
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCC-CcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTP-AQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~-~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
.+|.||+|.+ ..+..||.||++-. .+..+.|+||.++ +...+ +. . ......+.+..+++.++.|..+
T Consensus 3 ~~ILv~~D~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~--~~--~-----~~~~~~~~~~~~~~~~~~l~~~ 72 (141)
T 1jmv_A 3 KHILVAVDLS-EESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYT--GL--I-----DVNMSSMQDRISTETQKALLDL 72 (141)
T ss_dssp SEEEEEECCS-TTHHHHHHHHHHHHHHHTCEEEEEEEEECCGGGCC--CC--E-----EHHHHHHTTCCCCHHHHHHHHH
T ss_pred ceEEEEecCc-hhhHHHHHHHHHHHHhcCCEEEEEEEecCchhhhc--cc--c-----ccchHHHHHHHHHHHHHHHHHH
Confidence 4799999999 88999999999876 3789999999844 22111 10 0 0111122222233455555554
Q ss_pred HHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 122 LLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 122 ~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
+.+.++.+....+...+++++|++++.+++++-+|||+. .+.+.+ + + .++..|.++++ |.|++|-.
T Consensus 73 ---~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~-~~~~~~-l-g---s~~~~vl~~~~--~pVlvv~~ 138 (141)
T 1jmv_A 73 ---AESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHH-QDFWSK-L-M---SSTRQVMNTIK--IDMLVVPL 138 (141)
T ss_dssp ---HHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEEC-CCCHHH-H-H---HHHHHHHTTCC--SEEEEEEC
T ss_pred ---HHHcCCCceEEEEecCCHHHHHHHHHHhcCCCEEEEeCC-Cchhhh-h-c---chHHHHHhcCC--CCEEEeeC
Confidence 445688774334444589999999999999999999999 777765 4 3 58999999999 99999964
|
| >3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.7e-08 Score=103.21 Aligned_cols=142 Identities=15% Similarity=0.095 Sum_probs=107.1
Q ss_pred eEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcc-cccCCCccCC--CCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQM-IPVMGTKFPA--SSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 46 ~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~-ip~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
+|.|++|.+ +.|..||.||++-. .+..+.++||..+... .+...+ .+. ..+ .+.-..+.+..++..++.|..
T Consensus 2 ~ILv~vD~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 78 (268)
T 3ab8_A 2 RILLATDGS-PQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLD-FGALTVPV-PVLRTELERALALRGEAVLER 78 (268)
T ss_dssp CEEEECCSC-GGGHHHHHHHHHHHHHHTCCEEEEEEEEHHHHTHHHHC--------CH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEcCCC-HHHHHHHHHHHHHHHHhCCcEEEEEEeccCCcccccccC-chHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 689999999 89999999999876 3779999999765431 100011 110 000 011122244556778899999
Q ss_pred HHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCCh-hhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADK-HYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 121 y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~-~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
+...|...+|.++..+.++ +++++|+++ .++++-+|||+...+ .+.+.+.+ .++..|.++++ |.|++|-.
T Consensus 79 ~~~~~~~~g~~~~~~~~~g-~~~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~G---s~~~~v~~~a~--~PVlvv~~ 149 (268)
T 3ab8_A 79 VRQSALAAGVAVEAVLEEG-VPHEAILRR--ARAADLLVLGRSGEAHGDGFGGLG---STADRVLRASP--VPVLLAPG 149 (268)
T ss_dssp HHHHHHHTTCCEEEEEEEE-CHHHHHHHH--HTTCSEEEEESSCTTSCTTCCSCC---HHHHHHHHHCS--SCEEEECS
T ss_pred HHHHHHhCCCCeEEEEecC-CHHHHHHhh--ccCCCEEEEeccCCCccccccccc---hhHHHHHHhCC--CCEEEECC
Confidence 9999999999999988877 899999999 999999999999877 77666554 69999999999 99999964
|
| >3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-07 Score=102.72 Aligned_cols=142 Identities=13% Similarity=0.120 Sum_probs=112.8
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.|++|.+ ..+..||.||+.-. .+..+.++||.++.+.. +.+ .+..+....+.+...++.++.|..+.
T Consensus 8 k~ILv~~D~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (319)
T 3olq_A 8 QNLLVVIDPN-QDDQPALRRAVYIVQRNGGRIKAFLPVYDLSYD--MTT-----LLSPDERNAMRKGVINQKTAWIKQQA 79 (319)
T ss_dssp CEEEEECCTT-CSCCHHHHHHHHHHHHHCCEEEEEEEECCGGGG--CTT-----TSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCC-cccHHHHHHHHHHHHHcCCeEEEEEEecccchh--hcc-----ccChhhHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999 89999999999865 36799999997653321 111 12344555566666677888999999
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEecC
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~kg 199 (855)
..|...+|.++..+....+++.+|++++..++++-+|||+...+.+.+.+.+ .++..|.+.++ |.|++|-.+
T Consensus 80 ~~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~G---s~~~~vl~~~~--~PVlvv~~~ 151 (319)
T 3olq_A 80 RYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFT---PLDWQLLRKCP--APVWMVKDK 151 (319)
T ss_dssp HHHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCC---HHHHHHHHHCS--SCEEEEESS
T ss_pred HHHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcCchhhccccc---ccHHHHHhcCC--CCEEEecCc
Confidence 9998999999999884559999999999999999999999987777666554 58899999999 999999754
|
| >1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 | Back alignment and structure |
|---|
Probab=98.71 E-value=4.6e-08 Score=92.46 Aligned_cols=126 Identities=10% Similarity=0.044 Sum_probs=93.7
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEec-CC-CcccccCC-CccCCCCccHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVH-TP-AQMIPVMG-TKFPASSLEEEKVQAYREIERQDMHNHLD 119 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~-~~-~~~ip~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 119 (855)
.+|.||+|.+ ..|..||.||++-.. +..+.++||. .+ +. .+..+ ..+|.+ + .+.+..++..++.|.
T Consensus 5 ~~ILv~~D~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~-~~~~~~~~~~~~---~----~~~~~~~~~~~~~l~ 75 (138)
T 1q77_A 5 KVLLVLTDAY-SDCEKAITYAVNFSEKLGAELDILAVLEDVYNL-ERANVTFGLPFP---P----EIKEESKKRIERRLR 75 (138)
T ss_dssp EEEEEEESTT-CCCHHHHHHHHHHHTTTCCEEEEEEECHHHHHH-HHHHHHHCCCCC---T----HHHHHHHHHHHHHHH
T ss_pred cEEEEEccCC-HhHHHHHHHHHHHHHHcCCeEEEEEEecccccc-cccccccCCCCC---h----HHHHHHHHHHHHHHH
Confidence 4899999999 889999999998763 6789999998 53 11 11101 012321 1 223344566777888
Q ss_pred HHHHHH--hhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 120 MCLLIC--RQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 120 ~y~~~C--~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
.+ ..| ...+ +++..+..+ +++++|++++.+++++-+|||+... .++..|.++++ |.|++|
T Consensus 76 ~~-~~~~~~~~~-~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~g~------------sv~~~vl~~a~--~PVlvv 137 (138)
T 1q77_A 76 EV-WEKLTGSTE-IPGVEYRIG-PLSEEVKKFVEGKGYELVVWACYPS------------AYLCKVIDGLN--LASLIV 137 (138)
T ss_dssp HH-HHHHHSCCC-CCCEEEECS-CHHHHHHHHHTTSCCSEEEECSCCG------------GGTHHHHHHSS--SEEEEC
T ss_pred HH-HHHhhccCC-cceEEEEcC-CHHHHHHHHHHhcCCCEEEEeCCCC------------chHHHHHHhCC--CceEee
Confidence 88 775 4556 777777666 8999999999999999999998742 48899999999 999987
|
| >3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.69 E-value=8.8e-08 Score=102.74 Aligned_cols=138 Identities=14% Similarity=0.162 Sum_probs=109.4
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
-.+|.|+||.+ ..|..||.||++-. .+..+.++||..+........+ ...+ .+.+..++..++.|..+
T Consensus 22 ~~~ILv~vD~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~l~~~ 91 (294)
T 3loq_A 22 SNAMLLPTDLS-ENSFKVLEYLGDFKKVGVEEIGVLFVINLTKLSTVSGG-----IDID----HYIDEMSEKAEEVLPEV 91 (294)
T ss_dssp TCEEEEECCSC-TGGGGGGGGHHHHHHTTCCEEEEECCEECTTC-----C-----CCTT----HHHHHHHHHHHHHHHHH
T ss_pred hccEEEecCCC-HHHHHHHHHHHHHHhhcCCEEEEEEEecCccccccccc-----ccHH----HHHHHHHHHHHHHHHHH
Confidence 36999999999 89999999999865 3788999999876542211111 1111 23345567788899999
Q ss_pred HHHHhhcCceeEE-EEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 122 LLICRQMGVRAEK-LDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 122 ~~~C~~~~V~~~~-~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
...|...+|+++. .+++..+++++| ++..++++-+|||+...+.+.+.+.+ .++..|.+.++ |.|++|-.
T Consensus 92 ~~~~~~~g~~~~~~~v~~~g~~~~~I--~a~~~~~DliV~G~~g~~~~~~~~~G---s~~~~vl~~~~--~PVlvv~~ 162 (294)
T 3loq_A 92 AQKIEAAGIKAEVIKPFPAGDPVVEI--IKASENYSFIAMGSRGASKFKKILLG---SVSEGVLHDSK--VPVYIFKH 162 (294)
T ss_dssp HHHHHHTTCEEEECSSCCEECHHHHH--HHHHTTSSEEEEECCCCCHHHHHHHC---CHHHHHHHHCS--SCEEEECC
T ss_pred HHHHHHcCCCcceeEeeccCChhHhe--eeccCCCCEEEEcCCCCccccceeec---cHHHHHHhcCC--CCEEEecC
Confidence 9999999999998 666355999999 99999999999999988888877765 58999999999 99999964
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.68 E-value=2.3e-08 Score=107.85 Aligned_cols=160 Identities=23% Similarity=0.240 Sum_probs=113.1
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCc--ceeEeceec--C---ceEEEEEecC
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPN--LVTLVGACP--E---VWTLVYEYLP 604 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-Hpn--IV~l~g~~~--~---~~~LV~Ey~~ 604 (855)
...++.|.+..||+.. ..+++|+.... .....+.+|+.+|..+. +.. +.++++.+. + ..|+||+|++
T Consensus 25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN---RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST---TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC---CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3458999999999753 56889986532 22457889999999884 322 334444432 1 2478999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK---------------------------------------- 644 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------- 644 (855)
|.+|.+... ..++...+..++.+++..|..||...
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988865432 23666777888888888888888621
Q ss_pred ---------------CCCceecccccCceeeCC--CCcEEEeeccccccC--------------CCC------------c
Q 003033 645 ---------------PHSIVHGDLKPANILLDA--NFVSKLSDFEFLASG--------------ELT------------P 681 (855)
Q Consensus 645 ---------------~~~IvHrDLKp~NILld~--~~~~KL~DFg~~~~~--------------~~t------------~ 681 (855)
+..++|+|++|.|||++. ...+.|+|||.+..+ .++ .
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 135799999999999988 567889999632110 011 0
Q ss_pred ------------chhHHHHHHHHHHHHhCCCCC
Q 003033 682 ------------KSDVYSFGIILLRLLTGRPAL 702 (855)
Q Consensus 682 ------------ksDVwSfGvvl~elltG~~pf 702 (855)
-.+.|++|.++|.+.+|.++|
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 158899999999999998776
|
| >3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1.3e-07 Score=102.22 Aligned_cols=137 Identities=10% Similarity=0.206 Sum_probs=106.9
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
-.+|.|+||.+ ..+..||.||+.-. .+..+.++||..+.. .+..++.+ ..+ +.+..++..++.|..+
T Consensus 19 ~~~ILv~~D~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~-~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~ 87 (309)
T 3cis_A 19 SLGIIVGIDDS-PAAQVAVRWAARDAELRKIPLTLVHAVSPEV-ATWLEVPL-----PPG----VLRWQQDHGRHLIDDA 87 (309)
T ss_dssp TTEEEEECCSS-HHHHHHHHHHHHHHHHHTCCEEEEEECCCCC-CCTTCCCC-----CHH----HHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCC-HHHHHHHHHHHHHHHhcCCcEEEEEEecCcc-cccccCCC-----Cch----hhHHHHHHHHHHHHHH
Confidence 36899999999 89999999999876 367899999987532 11111111 222 3334556678888999
Q ss_pred HHHHhhc-----CceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 122 LLICRQM-----GVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 122 ~~~C~~~-----~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
...|... +|+++..+.++ +++++|++++. +++-+|||+...+.+.+.+.+ .++..|.+.++ |.|++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~g-~~~~~I~~~a~--~~DliV~G~~g~~~~~~~~~G---s~~~~vl~~~~--~PVlvv 159 (309)
T 3cis_A 88 LKVVEQASLRAGPPTVHSEIVPA-AAVPTLVDMSK--DAVLMVVGCLGSGRWPGRLLG---SVSSGLLRHAH--CPVVII 159 (309)
T ss_dssp HHHHHHHCSSSCCSCEEEEEESS-CHHHHHHHHGG--GEEEEEEESSCTTCCTTCCSC---HHHHHHHHHCS--SCEEEE
T ss_pred HHHHHHhcccCCCceEEEEEecC-CHHHHHHHHhc--CCCEEEECCCCCccccccccC---cHHHHHHHhCC--CCEEEE
Confidence 9888876 89999988876 89999999985 899999999987777666655 68999999998 999999
Q ss_pred ecC
Q 003033 197 CNG 199 (855)
Q Consensus 197 ~kg 199 (855)
-.+
T Consensus 160 ~~~ 162 (309)
T 3cis_A 160 HDE 162 (309)
T ss_dssp CTT
T ss_pred cCC
Confidence 643
|
| >3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-07 Score=100.65 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=101.4
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
-.+|.||+|.+ ..+..||.||++-. .+..+.++||..+.. .++.+..+
T Consensus 170 ~~~Ilv~~d~s-~~s~~al~~a~~la~~~~~~l~ll~v~~~~~-----------------------------~~~~l~~~ 219 (294)
T 3loq_A 170 FDRVLVAYDFS-KWADRALEYAKFVVKKTGGELHIIHVSEDGD-----------------------------KTADLRVM 219 (294)
T ss_dssp TSEEEEECCSS-HHHHHHHHHHHHHHHHHTCEEEEEEECSSSC-----------------------------CHHHHHHH
T ss_pred CCEEEEEECCC-HHHHHHHHHHHHHhhhcCCEEEEEEEccCch-----------------------------HHHHHHHH
Confidence 47999999999 88999999999866 377899999986632 23345566
Q ss_pred HHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEecC
Q 003033 122 LLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199 (855)
Q Consensus 122 ~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~kg 199 (855)
..++.+.+++++..+.++ +++++|++++.+++++-||||+..++.+.+.+.+ .++..|..+++ |.|.+|..+
T Consensus 220 ~~~l~~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~~~G---s~~~~vl~~~~--~pvLvv~~~ 291 (294)
T 3loq_A 220 EEVIGAEGIEVHVHIESG-TPHKAILAKREEINATTIFMGSRGAGSVMTMILG---STSESVIRRSP--VPVFVCKRG 291 (294)
T ss_dssp HHHHHHTTCCEEEEEECS-CHHHHHHHHHHHTTCSEEEEECCCCSCHHHHHHH---CHHHHHHHHCS--SCEEEECSC
T ss_pred HHHHHHcCCcEEEEEecC-CHHHHHHHHHHhcCcCEEEEeCCCCCCccceeeC---cHHHHHHhcCC--CCEEEECCC
Confidence 667777899988887776 9999999999999999999999999888887776 58999999999 999999653
|
| >3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.8e-07 Score=98.71 Aligned_cols=132 Identities=13% Similarity=0.109 Sum_probs=96.3
Q ss_pred CCeEEEEecCCcch-------hHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKE-------SKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDM 114 (855)
Q Consensus 44 ~~~v~VAV~~~~~~-------s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~ 114 (855)
-.+|.||+|.+ .. |..||.||++-. .+..+.|+||..+...-. ..| .. .+.+..+.+.
T Consensus 134 ~~~Ilva~D~s-~~~~~~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~----~~~----~~----~~~~~~~~~~ 200 (290)
T 3mt0_A 134 GGKILAAVDVG-NNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLSS----ADP----TF----QLSETIEARY 200 (290)
T ss_dssp TCEEEEEECTT-CCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEC-----------------CH----HHHHHHHHHH
T ss_pred CCeEEEEECCC-CcchhhhHHHHHHHHHHHHHHHHcCCeEEEEEEecCccccc----cCc----hh----HHHHHHHHHH
Confidence 47999999998 55 899999999865 478999999987753211 012 11 2333344445
Q ss_pred HHHHHHHHHHHhhcCce-eEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeE
Q 003033 115 HNHLDMCLLICRQMGVR-AEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHI 193 (855)
Q Consensus 115 ~~~l~~y~~~C~~~~V~-~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v 193 (855)
++.|..| +.+.++. ++..+.++ +++++|++++.+++++-||||+..++.+.+.+.+ .++..|.++++ |.|
T Consensus 201 ~~~l~~~---~~~~g~~~~~~~v~~g-~~~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~G---sv~~~vl~~~~--~pV 271 (290)
T 3mt0_A 201 REACRTF---QAEYGFSDEQLHIEEG-PADVLIPRTAQKLDAVVTVIGTVARTGLSGALIG---NTAEVVLDTLE--SDV 271 (290)
T ss_dssp HHHHHHH---HHHHTCCTTTEEEEES-CHHHHHHHHHHHHTCSEEEEECCSSCCGGGCCSC---HHHHHHHTTCS--SEE
T ss_pred HHHHHHH---HHHcCCCcceEEEecc-CHHHHHHHHHHhcCCCEEEECCCCCcCCcceecc---hHHHHHHhcCC--CCE
Confidence 5555553 3344775 44555555 9999999999999999999999999888877766 69999999999 999
Q ss_pred EEEe
Q 003033 194 WFIC 197 (855)
Q Consensus 194 ~~i~ 197 (855)
.+|-
T Consensus 272 Lvv~ 275 (290)
T 3mt0_A 272 LVLK 275 (290)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9995
|
| >3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.7e-07 Score=98.72 Aligned_cols=119 Identities=14% Similarity=0.143 Sum_probs=99.0
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.|++|.+ ..+..||.||+.-. .+..+.++||..| ...++.|..+.
T Consensus 8 ~~ILv~~D~s-~~s~~al~~A~~la~~~~a~l~ll~v~~~-----------------------------~~~~~~l~~~~ 57 (290)
T 3mt0_A 8 RSILVVIEPD-QLEGLALKRAQLIAGVTQSHLHLLVCEKR-----------------------------RDHSAALNDLA 57 (290)
T ss_dssp CEEEEECCSS-CSCCHHHHHHHHHHHHHCCEEEEEEECSS-----------------------------SCCHHHHHHHH
T ss_pred ceEEEEeCCC-ccchHHHHHHHHHHHhcCCeEEEEEeeCc-----------------------------HHHHHHHHHHH
Confidence 5899999999 89999999999865 3678999999863 11223455555
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEec
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~k 198 (855)
..+...+|.++..+....+++.+|++++..++++-+|||+...+.+.+.+.+ .++..|.+.++ |.|++|-.
T Consensus 58 ~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~g---s~~~~vl~~~~--~PVlvv~~ 128 (290)
T 3mt0_A 58 QELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILT---PDDWKLLRFAP--CPVLMTKT 128 (290)
T ss_dssp HHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCC---HHHHHHHHHCS--SCEEEECC
T ss_pred HHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccCCchhhcccC---HHHHHHHhcCC--CCEEEecC
Confidence 5666789999999988789999999999999999999999988777766655 68899999999 99999963
|
| >3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.7e-07 Score=97.91 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=101.3
Q ss_pred CCeEEEEecCCcc------hhHHHHHHHhhhc--C--CCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVK------ESKSVLLWALQNS--G--GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQD 113 (855)
Q Consensus 44 ~~~v~VAV~~~~~------~s~~al~WAl~~~--~--~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~ 113 (855)
-.+|.||+|.+.. .|..||.||+.-. . +..+.|+||..+...- .+..+|. . ....+.+..+++
T Consensus 156 ~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~~~a~l~ll~v~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~ 228 (319)
T 3olq_A 156 YGTIVVAANLSNEESYHDALNLKLIELTNDLSHRIQKDPDVHLLSAYPVAPIN--IAIELPD--F---DPNLYNNALRGQ 228 (319)
T ss_dssp TCEEEEECCCSCCSTHHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEECCCSCS--CCTTCTT--C---CHHHHHHHHHHH
T ss_pred CCeEEEEECCCCcchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCcchh--hhccCCc--c---cHHHHHHHHHHH
Confidence 4799999999833 4699999998754 2 7899999998775421 1111221 1 223345555566
Q ss_pred HHHHHHHHHHHHhhcCce-eEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCe
Q 003033 114 MHNHLDMCLLICRQMGVR-AEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCH 192 (855)
Q Consensus 114 ~~~~l~~y~~~C~~~~V~-~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~ 192 (855)
..+.|..|+ .+.++. ++..+.+ .+++++|++++.+++++-||||+..++.+.+.+.+ .++..|..+++ |.
T Consensus 229 ~~~~l~~~~---~~~~~~~~~~~v~~-g~~~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~G---sv~~~vl~~~~--~p 299 (319)
T 3olq_A 229 HLIAMKELR---QKFSIPEEKTHVKE-GLPEQVIPQVCEELNAGIVVLGILGRTGLSAAFLG---NTAEQLIDHIK--CD 299 (319)
T ss_dssp HHHHHHHHH---HHTTCCGGGEEEEE-SCHHHHHHHHHHHTTEEEEEEECCSCCSTHHHHHH---HHHHHHHTTCC--SE
T ss_pred HHHHHHHHH---HHhCCCcccEEEec-CCcHHHHHHHHHHhCCCEEEEeccCccCCcccccc---HHHHHHHhhCC--CC
Confidence 666666654 444553 3444444 48999999999999999999999999998887776 69999999999 99
Q ss_pred EEEEe
Q 003033 193 IWFIC 197 (855)
Q Consensus 193 v~~i~ 197 (855)
|.+|-
T Consensus 300 VLvv~ 304 (319)
T 3olq_A 300 LLAIK 304 (319)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99994
|
| >3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=6.7e-07 Score=96.58 Aligned_cols=131 Identities=12% Similarity=0.151 Sum_probs=97.4
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y 121 (855)
-.+|.||+|.+ ..+..||.||++-. .+..+.||||..+....+ .+. ...+ .++ ++.++.|..+
T Consensus 171 ~~~Ilv~~D~s-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~-----~~~--~~~~---~~~----~~~~~~l~~~ 235 (309)
T 3cis_A 171 QAPVLVGVDGS-SASELATAIAFDEASRRNVDLVALHAWSDVDVSE-----WPG--IDWP---ATQ----SMAEQVLAER 235 (309)
T ss_dssp CCCEEEECCSS-HHHHHHHHHHHHHHHHTTCCEEEEEESCSSCCTT-----CSS--CCHH---HHH----HHHHHHHHHH
T ss_pred CCeEEEEeCCC-hHHHHHHHHHHHHHHhcCCEEEEEEEeecccccC-----CCc--ccHH---HHH----HHHHHHHHHH
Confidence 36899999999 88999999999865 478999999987643211 111 1111 122 2333444444
Q ss_pred HHHHhh--cCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 122 LLICRQ--MGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 122 ~~~C~~--~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
+..+.. .+|.++..+.++ +++++|++++. +++-||||+..++.+.+.+.+ .++..|..+++ |.|.+|-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~g-~~~~~I~~~a~--~adliV~G~~~~~~~~~~l~G---sv~~~vl~~~~--~pVlvv~ 305 (309)
T 3cis_A 236 LAGWQERYPNVAITRVVVRD-QPARQLVQRSE--EAQLVVVGSRGRGGYAGMLVG---SVGETVAQLAR--TPVIVAR 305 (309)
T ss_dssp HTTHHHHCTTSCEEEEEESS-CHHHHHHHHHT--TCSEEEEESSCSSCCTTCSSC---HHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHhhCCCCcEEEEEEcC-CHHHHHHHhhC--CCCEEEECCCCCCCccccccC---cHHHHHHhcCC--CCEEEeC
Confidence 443332 478888887776 89999999997 999999999988888877765 69999999999 9999985
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=7.3e-06 Score=91.63 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=52.6
Q ss_pred cceeeccCceEEEEEEE--CCeEEEEEEecCCCC-------CChhhHHHHHHHHHhcCC--Cc-ceeEeceecCceEEEE
Q 003033 533 SLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSL-------QGPSEFQQEIDILSKIRH--PN-LVTLVGACPEVWTLVY 600 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~-------~~~~~f~~Ei~iL~~l~H--pn-IV~l~g~~~~~~~LV~ 600 (855)
...||.|.++.||++.. .+..|+||...+... .....+..|.++|..+.. |. +.+++.+..+..++||
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvm 114 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVM 114 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEE
Confidence 45789999999999954 357899998764321 234567889999998842 33 4466766666778999
Q ss_pred EecCCC
Q 003033 601 EYLPNG 606 (855)
Q Consensus 601 Ey~~~G 606 (855)
||+++.
T Consensus 115 E~l~g~ 120 (397)
T 2olc_A 115 EDLSHL 120 (397)
T ss_dssp CCCTTS
T ss_pred EeCCCc
Confidence 999764
|
| >3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=4.4e-06 Score=87.98 Aligned_cols=111 Identities=15% Similarity=0.112 Sum_probs=88.2
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||+|.+ ..+..||.||.+-. .+..+.|+||..+. ...++.+..+.
T Consensus 155 ~~ilv~~d~s-~~~~~al~~a~~la~~~~a~l~ll~v~~~~----------------------------~~~~~~l~~~~ 205 (268)
T 3ab8_A 155 EGALLGYDAS-ESAVRALHALAPLARALGLGVRVVSVHEDP----------------------------ARAEAWALEAE 205 (268)
T ss_dssp CEEEEECCSC-HHHHHHHHHHHHHHHHHTCCEEEEEECSSH----------------------------HHHHHHHHHHH
T ss_pred CEEEEEECCC-HHHHHHHHHHHHhhhcCCCEEEEEEEcCcH----------------------------HHHHHHHHHHH
Confidence 6899999998 88999999987643 46779999998552 02234555666
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
..+.+.+|+++..+.++ +++++|++++.++ +-||||+ .+.+.+.+ .++..|..+++ |.|.+|
T Consensus 206 ~~l~~~~~~~~~~~~~g-~~~~~i~~~a~~~--dliV~G~----~~~~~~~G---s~~~~vl~~~~--~pvlvv 267 (268)
T 3ab8_A 206 AYLRDHGVEASALVLGG-DAADHLLRLQGPG--DLLALGA----PVRRLVFG---STAERVIRNAQ--GPVLTA 267 (268)
T ss_dssp HHHHHTTCCEEEEEECS-CHHHHHHHHCCTT--EEEEEEC----CCSCCSSC---CHHHHHHHHCS--SCEEEE
T ss_pred HHHHHcCCceEEEEeCC-ChHHHHHHHHHhC--CEEEECC----cccccEec---cHHHHHHhcCC--CCEEEe
Confidence 66777799998877765 8999999999999 9999999 34444554 68999999999 999987
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=4.7e-06 Score=91.55 Aligned_cols=77 Identities=4% Similarity=0.008 Sum_probs=54.7
Q ss_pred ccee-eccCceEEEEEEEC--------CeEEEEEEecCCC---CCChhhHHHHHHHHHhcC-C--CcceeEeceecC---
Q 003033 533 SLKI-GEGGYGSIYKGLLR--------HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIR-H--PNLVTLVGACPE--- 594 (855)
Q Consensus 533 ~~~L-G~G~fG~Vykg~~~--------~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~-H--pnIV~l~g~~~~--- 594 (855)
...| +.|..+.+|+.... +..+++|+..... ......+.+|+.+|..|. + -.+.++++++.+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3467 88889999987765 5678899865432 112356889999999885 3 346677777643
Q ss_pred --ceEEEEEecCCCCHH
Q 003033 595 --VWTLVYEYLPNGSLE 609 (855)
Q Consensus 595 --~~~LV~Ey~~~GsL~ 609 (855)
..++||||++|.+|.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 357999999987654
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=7.3e-06 Score=88.60 Aligned_cols=142 Identities=20% Similarity=0.207 Sum_probs=93.5
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC---cceeEeceec---CceEEEEEecCCC
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP---NLVTLVGACP---EVWTLVYEYLPNG 606 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp---nIV~l~g~~~---~~~~LV~Ey~~~G 606 (855)
...++.|....||+. +..+++|+... ......+.+|+.+|..|.+. .+.+++.++. +..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v---g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE---TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE---CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 345788888999976 67788888532 11245688999999999752 2445555542 3467999999998
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC------------------------------------------- 643 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~------------------------------------------- 643 (855)
+|.+... ..++...+..++.+++..|..||..
T Consensus 99 ~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 8765321 1133444455555555555555542
Q ss_pred --------------CCCCceecccccCceeeCC---CCc-EEEeeccccccCCCCcchhHH
Q 003033 644 --------------KPHSIVHGDLKPANILLDA---NFV-SKLSDFEFLASGELTPKSDVY 686 (855)
Q Consensus 644 --------------~~~~IvHrDLKp~NILld~---~~~-~KL~DFg~~~~~~~t~ksDVw 686 (855)
.+..++|+|++|.|||++. ++. +.|+|||.+..+. +..|+-
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd--~~~Dla 232 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD--PDYDYV 232 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC--GGGGGH
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC--HHHHHH
Confidence 2335799999999999987 344 5899998766542 344543
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.95 E-value=6e-05 Score=81.57 Aligned_cols=154 Identities=16% Similarity=0.168 Sum_probs=89.5
Q ss_pred ceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-----CCcceeEe-c----eecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----HPNLVTLV-G----ACPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----HpnIV~l~-g----~~~~~~~LV~Ey~ 603 (855)
..|+.|..+.||+....+..+++|+... ....+..|+.++..|. .|.++... | ...+..++||+|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGAVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEEEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCCEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566677899999887777799999875 2345556677776663 24444311 1 1234578999999
Q ss_pred CCCCHH-----------HH---hcc--cCC--C-------CCCCHHHHH-------------------------------
Q 003033 604 PNGSLE-----------DR---LSC--KDN--S-------PPLSWQTRI------------------------------- 627 (855)
Q Consensus 604 ~~GsL~-----------~~---L~~--~~~--~-------~~l~~~~~~------------------------------- 627 (855)
+|.++. .. |+. ... . ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11 111 000 0 012343211
Q ss_pred HHHHHHHHHHHHHhh----------cCCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 628 RIATELCSVLIFLHS----------CKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 628 ~i~~qia~aL~yLH~----------~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
.+...+..++.+|+. ..+..++|+|++|.|||++.++.+.|+||+.+..+. + +|-|+.++..++
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~--~---~~Dla~~l~~~~ 267 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDL--P---IRDLRKMIIPLL 267 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEECC--T---HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccCC--h---HHHHHHHHHHHH
Confidence 011123345666653 134689999999999999888899999999875443 2 344455555553
|
| >3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.3e-06 Score=87.98 Aligned_cols=70 Identities=11% Similarity=0.254 Sum_probs=62.2
Q ss_pred CCCCcCCCcchhcccCCCcc-cCCccchHHhhhhhccC-CCCCCCC--cCCCCCCCCCCCcHHHHHHHHHHHhh
Q 003033 785 PPPYFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDS-GHETSPM--TNLPLAHKNLVPNLALRSAIQEWLQQ 854 (855)
Q Consensus 785 ~P~~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~s-g~~~sp~--T~~~l~~~~l~pn~~l~~~i~~w~~~ 854 (855)
....+.|||+.++|.||++. ..|++|++.+|..|+.. +..+||+ ++..+....|+||..|+..|+.|..+
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN~~L~~lve~~k~r 251 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIMELRCKIAKMK 251 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEECHHHHHHHHHHHHH
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcCHHHHHHHHHHHHH
Confidence 35678999999999999985 88999999999999976 3468999 55999999999999999999999864
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.4e-05 Score=80.97 Aligned_cols=133 Identities=19% Similarity=0.162 Sum_probs=88.6
Q ss_pred eeeccCce-EEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEecee--cCceEEEEEecCCCCH
Q 003033 535 KIGEGGYG-SIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLPNGSL 608 (855)
Q Consensus 535 ~LG~G~fG-~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~LV~Ey~~~GsL 608 (855)
.+..|..| .||+.... +..+.+|+-... ....+.+|..+|..|. +--+.++++++ .+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455554 68876554 457889986532 2456889999999885 22245666665 4567899999999887
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------------
Q 003033 609 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK-------------------------------------------- 644 (855)
Q Consensus 609 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~-------------------------------------------- 644 (855)
.+..... ......++.+++..|.-||...
T Consensus 108 ~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 7654210 1122345555566666666421
Q ss_pred -----------CCCceecccccCceeeCCCCcEEEeeccccccC
Q 003033 645 -----------PHSIVHGDLKPANILLDANFVSKLSDFEFLASG 677 (855)
Q Consensus 645 -----------~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~ 677 (855)
+..++|+|+.|.|||++.++.+-|+|||....+
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 112799999999999998877789999876544
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00013 Score=82.38 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=47.2
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCC----C---ChhhHHHHHHHHHhc---CCCcceeEeceecCceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL----Q---GPSEFQQEIDILSKI---RHPNLVTLVGACPEVWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~----~---~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~~~~~LV~Ey 602 (855)
...||.|..+.||+....+..++||...+... . .......|.+++..+ ....+.+++.+..+..++||||
T Consensus 39 i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~~~~~~lv~e~ 118 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRY 118 (420)
T ss_dssp EEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEETTTTEEEECC
T ss_pred EEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEECCCccEEEEee
Confidence 45689999999999876667899995433211 1 112233344444333 2345667777777778899999
Q ss_pred c-CC
Q 003033 603 L-PN 605 (855)
Q Consensus 603 ~-~~ 605 (855)
+ ++
T Consensus 119 l~~g 122 (420)
T 2pyw_A 119 LEPP 122 (420)
T ss_dssp CCTT
T ss_pred cCCc
Confidence 9 76
|
| >3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=5.9e-05 Score=66.44 Aligned_cols=72 Identities=24% Similarity=0.332 Sum_probs=63.8
Q ss_pred CCCCCCcCCCcchhcccCCCccc-CCccchHHhhhhhccC-CCCCCCCcCCCC-CCCCCCCcHHHHHHHHHHHhh
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDS-GHETSPMTNLPL-AHKNLVPNLALRSAIQEWLQQ 854 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~-dg~tye~~ai~~wl~s-g~~~sp~T~~~l-~~~~l~pn~~l~~~i~~w~~~ 854 (855)
...+..+.|||-.++|.+|++.. -|++|-...|..|+.. +..+||+.+..+ ....+.||..|+..|+.|...
T Consensus 8 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~~~~ 82 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNE 82 (92)
T ss_dssp CCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEECHHHHHHHHHHHHH
T ss_pred ccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCcCHHHHHHHHHHHHH
Confidence 35677899999999999999999 7999999999999964 457999999997 577899999999999999864
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00039 Score=74.44 Aligned_cols=151 Identities=11% Similarity=0.094 Sum_probs=84.8
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEec-CCCCHHH
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYL-PNGSLED 610 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey~-~~GsL~~ 610 (855)
...|+.|....+|+. ..+++|+...... ......+|+.++..+....+ .++++.+.+..++|+||+ ++.+|..
T Consensus 23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~~g~~l~~ 97 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSP 97 (301)
T ss_dssp CEEEESCSSEEEEEE----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTCCEEEECCTTCEECCH
T ss_pred eeEcCCcccccccee----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEECCCCEEEEeecCCCccCCH
Confidence 567899999999988 5688888765321 12234578888887742222 467777776678999999 5544421
Q ss_pred ---------------H---hcccCCC--CCCC-HHHHHHHHHH--------------HHHHHH----HHhh-cCCCCcee
Q 003033 611 ---------------R---LSCKDNS--PPLS-WQTRIRIATE--------------LCSVLI----FLHS-CKPHSIVH 650 (855)
Q Consensus 611 ---------------~---L~~~~~~--~~l~-~~~~~~i~~q--------------ia~aL~----yLH~-~~~~~IvH 650 (855)
. |+..... .... +.....+... +...+. .|.. ..+..++|
T Consensus 98 ~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H 177 (301)
T 3dxq_A 98 EKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACH 177 (301)
T ss_dssp HHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEEC
T ss_pred hhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceeec
Confidence 0 1111100 0011 1111111110 111111 1111 23346899
Q ss_pred cccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHH
Q 003033 651 GDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLR 694 (855)
Q Consensus 651 rDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~e 694 (855)
+|+.|.||| ..++.+.|+||+++..+.. .|-+|.++.+
T Consensus 178 gDl~~~Nil-~~~~~~~lID~e~a~~g~~-----~~Dla~~~~~ 215 (301)
T 3dxq_A 178 CDPLCENFL-DTGERMWIVDWEYSGMNDP-----LWDLGDLSVE 215 (301)
T ss_dssp SCCCGGGEE-ECSSCEEECCCTTCEEECT-----HHHHHHHHHH
T ss_pred cCCCcCCEE-ECCCCEEEEecccccCCCH-----HHHHHHHHHH
Confidence 999999999 5566789999998765432 3444544444
|
| >3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00069 Score=63.11 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=60.9
Q ss_pred CcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCC-CCCCCcHHHHHHHHHHHh
Q 003033 788 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAH-KNLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 788 ~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~-~~l~pn~~l~~~i~~w~~ 853 (855)
.+.|||-.+++.+|++..-|++|-...|..|+..+..+||+++..+.. ..+.||..|+..|+.|..
T Consensus 52 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~~p 118 (124)
T 3fl2_A 52 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFP 118 (124)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCCCHHHHHHHHHHST
T ss_pred CCCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCCCCCCCCCHHHHHHHHHHcc
Confidence 367999999999999999999999999999998766799999999988 889999999999999864
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00069 Score=72.90 Aligned_cols=157 Identities=14% Similarity=0.136 Sum_probs=90.4
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc--ceeEece--------ecCceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGA--------CPEVWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn--IV~l~g~--------~~~~~~LV~Ey 602 (855)
...|+.|....+|+....+..+++|+.... .....+..|+.++..|.... +.+++.. ..+..+++|+|
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eeccCCCcccceEEEEeCCccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 345777888999998877667899998753 13346778888888774212 2233321 23456789999
Q ss_pred cCCCCHHH-----------H---hccc--CCCCC-------CCHHHHHHH------------HHHHHHHHHHHhhc----
Q 003033 603 LPNGSLED-----------R---LSCK--DNSPP-------LSWQTRIRI------------ATELCSVLIFLHSC---- 643 (855)
Q Consensus 603 ~~~GsL~~-----------~---L~~~--~~~~~-------l~~~~~~~i------------~~qia~aL~yLH~~---- 643 (855)
++|..+.. . |+.. .-..+ ..|.....- ...+...+.+|...
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865311 1 1110 00000 124321110 11234455566532
Q ss_pred CCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 644 KPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 644 ~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
.+.+++|+|+.|.|||++.++.+.|+||+.+..+. -+|-+++++..++
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~-----~~~Dla~~l~~~~ 232 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDL-----LAYDVSICLNAWC 232 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEE-----HHHHHHHHHHHHS
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccCch-----hHHHHHHHHHHHH
Confidence 24579999999999999987767899998765432 2555666665543
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.001 Score=72.08 Aligned_cols=137 Identities=20% Similarity=0.152 Sum_probs=89.1
Q ss_pred cceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC---CCcceeEecee--cCceEEEEEecCCCC
Q 003033 533 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR---HPNLVTLVGAC--PEVWTLVYEYLPNGS 607 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~---HpnIV~l~g~~--~~~~~LV~Ey~~~Gs 607 (855)
...|+.|.+..+|+....+..+++|+.... ....|.+|...|+.|. ...+.++++++ .+..++||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 456899999999998777788999987643 3567889999999884 24566777666 346889999999876
Q ss_pred HH--------HH---hcccCC-------------------CCCCCHHHHH---HHHHH----------------HHHHH-
Q 003033 608 LE--------DR---LSCKDN-------------------SPPLSWQTRI---RIATE----------------LCSVL- 637 (855)
Q Consensus 608 L~--------~~---L~~~~~-------------------~~~l~~~~~~---~i~~q----------------ia~aL- 637 (855)
+. .. |+.... ...-+|.... ++..+ ++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 42 11 221111 0012465332 11111 11111
Q ss_pred HHHhh-cCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 638 IFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 638 ~yLH~-~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
..|.. ..+..+||+|+.+.|||++.++ +-|.||..
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~~ 233 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPAC 233 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCcc
Confidence 23421 1235799999999999999887 88999853
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00045 Score=78.30 Aligned_cols=155 Identities=22% Similarity=0.265 Sum_probs=93.9
Q ss_pred cceeeccCceEEEEEEEC---------CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEe
Q 003033 533 SLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEY 602 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey 602 (855)
...|+.|....||+.... +..+.+|+.... .....+.+|..++..|...++ .++++.+.+. +||||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~g--~v~e~ 153 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSGG--RLEEY 153 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETTE--EEECC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC--EEEEE
Confidence 346888888999998864 367899988432 112567789999998853333 5677777653 89999
Q ss_pred cCCCCHHH--------------Hh---cccC---CCCCC-CHHHHHHHHHHH--------------------------HH
Q 003033 603 LPNGSLED--------------RL---SCKD---NSPPL-SWQTRIRIATEL--------------------------CS 635 (855)
Q Consensus 603 ~~~GsL~~--------------~L---~~~~---~~~~l-~~~~~~~i~~qi--------------------------a~ 635 (855)
++|.+|.. .| +... ...+. .|....++..++ ..
T Consensus 154 l~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (429)
T 1nw1_A 154 IPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLAR 233 (429)
T ss_dssp CCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSSCHHHHHHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHH
T ss_pred eCCcccChhhcCCHHHHHHHHHHHHHHhCCccccCCCcchHHHHHHHHHHHHHhhcccccccccccccccccccHHHHHH
Confidence 98643321 11 1111 01112 243333333221 11
Q ss_pred HHHHHhh-----cCCCCceecccccCceeeCCC----------------------------CcEEEeeccccccCCCCcc
Q 003033 636 VLIFLHS-----CKPHSIVHGDLKPANILLDAN----------------------------FVSKLSDFEFLASGELTPK 682 (855)
Q Consensus 636 aL~yLH~-----~~~~~IvHrDLKp~NILld~~----------------------------~~~KL~DFg~~~~~~~t~k 682 (855)
.+.+|.. ..+..++|+|+.+.|||++.+ +.+.|+|||++..+..
T Consensus 234 ~~~~l~~~l~~~~~~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~g~p--- 310 (429)
T 1nw1_A 234 ELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYR--- 310 (429)
T ss_dssp HHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEEEEH---
T ss_pred HHHHHHHhccccCCCeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCcCcc---
Confidence 2222221 234568999999999999875 6789999998765432
Q ss_pred hhHHHHHHHHHHHH
Q 003033 683 SDVYSFGIILLRLL 696 (855)
Q Consensus 683 sDVwSfGvvl~ell 696 (855)
.|=||..+.+..
T Consensus 311 --~~DLA~~~~e~~ 322 (429)
T 1nw1_A 311 --AFDFANHFIEWT 322 (429)
T ss_dssp --HHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHh
Confidence 456777777654
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0012 Score=75.33 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=49.5
Q ss_pred cceeeccCceEEEEEEECC--eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc-eeEeceecCceEEEEEecCCCCH
Q 003033 533 SLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSL 608 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-V~l~g~~~~~~~LV~Ey~~~GsL 608 (855)
...|+.|-...+|+....+ ..+++|+...... ..-.-.+|..+|..|...++ .++++.+.+ .+||||++|.+|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC--eEEEEeeCCccC
Confidence 3568888889999998876 7899998754321 11122589999999975444 567887754 359999987443
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.002 Score=68.47 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=55.8
Q ss_pred ccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC--C-cceeEeceecCceEEEEEecCC
Q 003033 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--P-NLVTLVGACPEVWTLVYEYLPN 605 (855)
Q Consensus 530 f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H--p-nIV~l~g~~~~~~~LV~Ey~~~ 605 (855)
......+|.|..+.||+.... ++.|.+|+...........|.+|+..|+.|.- + -+.+++++. ..++||||+++
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~~~lv~e~l~~ 94 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--TTEEEEECCCC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc--CceEEEEeecc
Confidence 344567999999999999886 68899998765544445678899999998842 1 234455543 35789999987
Q ss_pred CC
Q 003033 606 GS 607 (855)
Q Consensus 606 Gs 607 (855)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 65
|
| >1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00043 Score=66.92 Aligned_cols=67 Identities=16% Similarity=0.255 Sum_probs=62.0
Q ss_pred CCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCC-CCCCcHHHHHHHHHHHh
Q 003033 787 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHK-NLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 787 ~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~-~l~pn~~l~~~i~~w~~ 853 (855)
..+.|||..+++.+|++...|++|-...|..|+..+..+||+++..+... .|.||..|+..|..|..
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~n~~l~~lv~~~~p 144 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLLDLFFP 144 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCBCHHHHHHHHHHST
T ss_pred cCCEeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCCCCCCCCHHHHHHHHHHhh
Confidence 45789999999999999999999999999999998667999999999988 99999999999999864
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.004 Score=67.42 Aligned_cols=148 Identities=13% Similarity=0.064 Sum_probs=78.7
Q ss_pred eeeccCceE-EEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC--CcceeEeceecCceEEEEEecCCCCHHH
Q 003033 535 KIGEGGYGS-IYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--PNLVTLVGACPEVWTLVYEYLPNGSLED 610 (855)
Q Consensus 535 ~LG~G~fG~-Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H--pnIV~l~g~~~~~~~LV~Ey~~~GsL~~ 610 (855)
.|+.|+... +|+.... +..+++|...+.. ...+..|+.++..+.. -.+.+++.++.+..++|||++.+..+.+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g~ll~e~l~~~~l~~ 101 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARGLLLIEDLGDALFTE 101 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTTEEEECCCCSCBHHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCCEEEEeeCCCcchHH
Confidence 455554444 6666553 6667777654432 1345678888877742 2345667666555578999997766654
Q ss_pred Hhcc---------------------cC--CCCCCCHHHHH-------H-H------------HHHHHHHHHHHh---hcC
Q 003033 611 RLSC---------------------KD--NSPPLSWQTRI-------R-I------------ATELCSVLIFLH---SCK 644 (855)
Q Consensus 611 ~L~~---------------------~~--~~~~l~~~~~~-------~-i------------~~qia~aL~yLH---~~~ 644 (855)
.+.. .. ..+.+...... . + ...+...+..|- ...
T Consensus 102 ~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~ 181 (333)
T 3csv_A 102 VINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEG 181 (333)
T ss_dssp HHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCS
T ss_pred HhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccC
Confidence 3311 00 01112211100 0 0 001111222221 123
Q ss_pred CCCceecccccCceeeCCC----CcEEEeeccccccCCCCcchhHHH
Q 003033 645 PHSIVHGDLKPANILLDAN----FVSKLSDFEFLASGELTPKSDVYS 687 (855)
Q Consensus 645 ~~~IvHrDLKp~NILld~~----~~~KL~DFg~~~~~~~t~ksDVwS 687 (855)
+..++|+|+.+.|||++.+ +.+.|.||+.+..+.. ..|+.+
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~--~~DLa~ 226 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR--AYDLVS 226 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT--THHHHH
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC--HHHHHH
Confidence 5689999999999999874 7899999987765543 345553
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0018 Score=72.06 Aligned_cols=156 Identities=19% Similarity=0.240 Sum_probs=94.6
Q ss_pred ceeeccCceEEEEEEEC---------CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~~~~LV~Ey~ 603 (855)
..|..|-...+|+.... +..+.+|+... .......+.+|..+++.|. +.-..++++.|.+. +||||+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g--~v~e~i 132 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPEG--RLEQYI 132 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE--EEEECC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc--cEEEEe
Confidence 45666778888988763 36788888533 2234556779999998884 33335677777664 899999
Q ss_pred CCCCHHH--------------Hh---cccCC--CCCC--CHHHHHHHHHHHHH-------------------HHHHHhh-
Q 003033 604 PNGSLED--------------RL---SCKDN--SPPL--SWQTRIRIATELCS-------------------VLIFLHS- 642 (855)
Q Consensus 604 ~~GsL~~--------------~L---~~~~~--~~~l--~~~~~~~i~~qia~-------------------aL~yLH~- 642 (855)
+|.+|.. .| +.... ..+. .|.+..++..++.. .+.+|..
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 8755431 11 11110 1112 34555555544322 2333321
Q ss_pred ----cCCCCceecccccCceeeCCC----CcEEEeeccccccCCCCcchhHHHHHHHHHHHHh
Q 003033 643 ----CKPHSIVHGDLKPANILLDAN----FVSKLSDFEFLASGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 643 ----~~~~~IvHrDLKp~NILld~~----~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ellt 697 (855)
..+..++|+|+.+.|||++.+ +.+.|+||+++..+. =.|-||..+.+...
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~-----~~~Dla~~~~~~~~ 270 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNY-----RGFDIGNHFCEWVY 270 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEE-----HHHHHHHHHHHTTE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCC-----hHHHHHHHHHHHHh
Confidence 234579999999999999876 789999999876432 35677878877764
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0019 Score=71.14 Aligned_cols=155 Identities=14% Similarity=0.149 Sum_probs=85.5
Q ss_pred cceeeccCceEEEEEEECC----------eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc-ceeEeceecCceEEEEE
Q 003033 533 SLKIGEGGYGSIYKGLLRH----------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACPEVWTLVYE 601 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~----------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-IV~l~g~~~~~~~LV~E 601 (855)
...|+.|....+|+....+ ..+++|+...... .......|..++..|...+ ..++++.+. .++|||
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~--~~~v~e 114 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN--GGRIEE 114 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET--TEEEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC--CcEEEE
Confidence 3467888888999987754 5788888754311 1113467899998885333 346666553 368999
Q ss_pred ecCCCCHH--------------HHh---ccc---C-CCCCCC-----HHHHHHHHH--------------------HHHH
Q 003033 602 YLPNGSLE--------------DRL---SCK---D-NSPPLS-----WQTRIRIAT--------------------ELCS 635 (855)
Q Consensus 602 y~~~GsL~--------------~~L---~~~---~-~~~~l~-----~~~~~~i~~--------------------qia~ 635 (855)
|++|.+|. ..| +.. . ....+. |.....+.. .+..
T Consensus 115 ~i~G~~l~~~~~~~~~~~~~~a~~La~lH~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (369)
T 3c5i_A 115 WLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDK 194 (369)
T ss_dssp CCCSEECCGGGGGCHHHHHHHHHHHHHHHTHHHHSCCCTTSCCSCHHHHHHHHHHHHHTTCSSGGGC-CCHHHHHHHHHH
T ss_pred EecCCcCChhhcCChHHHHHHHHHHHHHHcCcccccCcccCCCCCcHHHHHHHHHHHHhhhhhHHHHHhhHHHHHHHHHH
Confidence 99875431 011 110 0 000111 111111111 1112
Q ss_pred HHHHHhh-------cCCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 636 VLIFLHS-------CKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 636 aL~yLH~-------~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
.+.+|.. ..+..++|+|+.|.|||++.+. +.|+||+++..+. =.|=||.++.+..
T Consensus 195 l~~~l~~~~~~~~~~~~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~g~-----~~~Dla~~~~~~~ 256 (369)
T 3c5i_A 195 FIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKC-LRLIDFEYSGFNF-----LATDIANFFIETS 256 (369)
T ss_dssp HHHHHHHHTTSSCGGGCEEEECSCCCGGGEEECC-C-EEECCCTTCEEEE-----HHHHHHHHHHGGG
T ss_pred HHHHHHHhhhhcccCCCeEEEeCCCCcccEEecCCc-EEEEEecCCCCCc-----hHHHHHHHHHHHh
Confidence 2334421 1235799999999999998655 8999999876442 2455677776654
|
| >2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0013 Score=58.62 Aligned_cols=67 Identities=13% Similarity=0.202 Sum_probs=60.9
Q ss_pred CCcCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhh
Q 003033 787 PYFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 854 (855)
Q Consensus 787 ~~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~ 854 (855)
..+.|||-.+.+.+|++. .-|++|-...|..|+.. +.+||+.+..+....+.||..|+..|+.|++.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~l~~n~~l~~~i~~~~~~ 88 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY-KTQCPTCCVTVTEPDLKNNRILDELVKSLNFA 88 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCCGGGCEECHHHHHHHHHHHHH
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC-CCCCCCCCCcCChhhCCcCHHHHHHHHHHHHH
Confidence 347899999999999888 79999999999999985 57999999999999999999999999999753
|
| >1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0038 Score=57.41 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=58.6
Q ss_pred CcCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHh
Q 003033 788 YFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 788 ~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~ 853 (855)
.+.|||-.+++.+|++. .-|++|-...|..|+. ..||+.+..+....+.||..|+..|..|.+
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~~~~~~~n~~l~~l~~~~~~ 85 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAWIQDLKINRQLDSMIQLCSK 85 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCSCSSCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc---CCCcCCCCcCccccccccHHHHHHHHHHHH
Confidence 47899999999999999 8999999999999987 789999999999999999999999998865
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.024 Score=60.87 Aligned_cols=148 Identities=11% Similarity=0.157 Sum_probs=84.9
Q ss_pred ceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCC--cceeEece-------ecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGA-------CPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp--nIV~l~g~-------~~~~~~LV~Ey~ 603 (855)
..|+ |....||+.... +..+++|...+.. .....+..|..++..|... .+.+++.. ..+..++||+|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 888899987654 4579999987542 2456778899998887421 23444432 123456899999
Q ss_pred CCCCHH-----------HH---hcc----cC--CCCCCCHHHH----HHH---------------HHHHHHHHHHHhh--
Q 003033 604 PNGSLE-----------DR---LSC----KD--NSPPLSWQTR----IRI---------------ATELCSVLIFLHS-- 642 (855)
Q Consensus 604 ~~GsL~-----------~~---L~~----~~--~~~~l~~~~~----~~i---------------~~qia~aL~yLH~-- 642 (855)
+|..+. .. |+. .. ..+.+++... ..+ ...+...+..+..
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875431 11 111 00 0112333211 001 0111122333332
Q ss_pred --cCCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHH
Q 003033 643 --CKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYS 687 (855)
Q Consensus 643 --~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwS 687 (855)
..+..++|+|++|.|||++ + .+.|+||+.+..+. .-.|++.
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~--~~~Dla~ 232 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNGP--AVQDLWM 232 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEEC--TTHHHHT
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcCc--HHHHHHH
Confidence 1346789999999999999 4 88999998765543 2355554
|
| >2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0029 Score=61.87 Aligned_cols=68 Identities=18% Similarity=0.326 Sum_probs=60.4
Q ss_pred CCCcCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCC-CCCCCCcHHHHHHHHHHHh
Q 003033 786 PPYFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLA-HKNLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 786 P~~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~-~~~l~pn~~l~~~i~~w~~ 853 (855)
...+.|||..+.+.+|+.. ..|++|-...|..|+..++.+||+++..+. ...|.||..|+..|..|..
T Consensus 52 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~~~~l~~~i~~~~~ 121 (165)
T 2ckl_B 52 HSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYP 121 (165)
T ss_dssp HHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGEEECHHHHHHHHHHC-
T ss_pred CCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccCCcCHHHHHHHHHHHc
Confidence 3457999999999999987 899999999999999988889999999984 5679999999999998853
|
| >3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0032 Score=58.08 Aligned_cols=68 Identities=15% Similarity=0.256 Sum_probs=62.4
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w 851 (855)
..+..+.|||-.+++.+|+...-|++|-...|..|+..+..+||+.+..+....+.||..++..|.++
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~l 81 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSL 81 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTS
T ss_pred CCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHccc
Confidence 45677899999999999999999999999999999987667999999999999999999999999865
|
| >2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0057 Score=55.34 Aligned_cols=67 Identities=10% Similarity=0.277 Sum_probs=60.1
Q ss_pred CCCcCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCC----CCCCcHHHHHHHHHHHh
Q 003033 786 PPYFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHK----NLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 786 P~~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~----~l~pn~~l~~~i~~w~~ 853 (855)
+..+.|||-.+++.+|+.. .-|++|-...|..|+.. ..+||+.+..+... .+.+|..|+..|..|..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~l~~n~~l~~~i~~~~~ 84 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVP 84 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS-CSBCTTTCCBSCSSCGGGGEEECHHHHHHHHHHST
T ss_pred CCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh-CCcCcCCCccccccCcccccCcCHHHHHHHHHHhh
Confidence 3467899999999999997 89999999999999987 48999999999876 78999999999998864
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.035 Score=60.50 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=28.2
Q ss_pred CCCceecccccCceeeCCCCcEEEeeccccccC
Q 003033 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASG 677 (855)
Q Consensus 645 ~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~ 677 (855)
+..++|+|+.|.|||++.++.+.|.||+.+..+
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 357999999999999998888999999876543
|
| >2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.0025 Score=53.94 Aligned_cols=65 Identities=17% Similarity=0.300 Sum_probs=56.9
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCC------CCCCCCcCCCCCCCCCCCcHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSG------HETSPMTNLPLAHKNLVPNLALRSAI 848 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg------~~~sp~T~~~l~~~~l~pn~~l~~~i 848 (855)
.....+.|||-.+.+.+|++..-|++|=...|..|+... ..++|+.+..+....+.||..|+..|
T Consensus 8 ~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~lv 78 (79)
T 2egp_A 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIV 78 (79)
T ss_dssp CCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTCSSSCCCC
T ss_pred hcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcCHHHHHhh
Confidence 345678999999999999999999999999999999863 67899999999999999998876543
|
| >3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.0093 Score=54.52 Aligned_cols=66 Identities=17% Similarity=0.262 Sum_probs=60.7
Q ss_pred CCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCC-------CCCCCcHHHHHHHHHHH
Q 003033 787 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAH-------KNLVPNLALRSAIQEWL 852 (855)
Q Consensus 787 ~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~-------~~l~pn~~l~~~i~~w~ 852 (855)
..+.|||-.+.+.+|++..-|++|=...|..|+..+..+||+.+..+.. ..+.+|..|...|+.|.
T Consensus 14 ~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~n~~l~~~i~~~~ 86 (115)
T 3l11_A 14 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVELWTIIQKHY 86 (115)
T ss_dssp HHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHHHHHHHHHTTCCBCHHHHHHHHHHS
T ss_pred CCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCccccccccccchhhHHHHHHHHHHC
Confidence 4589999999999999999999999999999999878899999999874 77889999999999986
|
| >2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.0031 Score=54.00 Aligned_cols=65 Identities=25% Similarity=0.432 Sum_probs=57.0
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccC-----CCCCCCCcCCCCCCCCCCCcHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDS-----GHETSPMTNLPLAHKNLVPNLALRSAI 848 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~s-----g~~~sp~T~~~l~~~~l~pn~~l~~~i 848 (855)
.....+.|||-.+.+.+|++..-|++|=...|..|+.. +...+|+.+..+....+.||..|+..|
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~l~~~v 84 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPNLHVANIV 84 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEECSCCCSSC
T ss_pred hCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcCHHHHHhh
Confidence 34567899999999999999999999999999999976 367899999999999999998876543
|
| >2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.0043 Score=53.02 Aligned_cols=65 Identities=20% Similarity=0.391 Sum_probs=57.0
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccC-----CCCCCCCcCCCCCCCCCCCcHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDS-----GHETSPMTNLPLAHKNLVPNLALRSAI 848 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~s-----g~~~sp~T~~~l~~~~l~pn~~l~~~i 848 (855)
.....+.|||-.+.+.+|++..-|++|=...|..|+.. +...+|+.+..+....+.||+.|+..|
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~l~~~v 84 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRHVANIV 84 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCSCCCCCCC
T ss_pred HccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCccHHHHHhh
Confidence 45667899999999999999999999999999999875 467999999999999999998876543
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.078 Score=59.76 Aligned_cols=156 Identities=13% Similarity=0.158 Sum_probs=96.2
Q ss_pred ceeeccCceEEEEEEEC---------CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~~~~LV~Ey~ 603 (855)
..|..|-...+|+.... +..+++++..... ...-.-.+|..++..|. +.-..++++.+. .++||||+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~~~I~efI 152 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP--EGRIEEFI 152 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET--TEEEEECC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--CCEEEEEe
Confidence 45777788899998876 5778998864432 22223468999998885 332345666554 36899999
Q ss_pred CCCCHHH--------------Hh---ccc-------C---CCCCCCHHHHHHHHHHH-------------------HHHH
Q 003033 604 PNGSLED--------------RL---SCK-------D---NSPPLSWQTRIRIATEL-------------------CSVL 637 (855)
Q Consensus 604 ~~GsL~~--------------~L---~~~-------~---~~~~l~~~~~~~i~~qi-------------------a~aL 637 (855)
+|.+|.. .| +.. . ...+..|.+..++..++ ...+
T Consensus 153 ~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e~ 232 (424)
T 3mes_A 153 DGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEEI 232 (424)
T ss_dssp CSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHHH
T ss_pred CCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHHH
Confidence 9865321 11 100 0 11222355544444332 1223
Q ss_pred HHHhh---------------------cCCCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHH
Q 003033 638 IFLHS---------------------CKPHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLL 696 (855)
Q Consensus 638 ~yLH~---------------------~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ell 696 (855)
.+|.. ..+..++|+|+.+.||| +.++.+.|+||+++..+. =.|-||.++.+..
T Consensus 233 ~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~-----~~~Dla~~~~~~~ 306 (424)
T 3mes_A 233 DQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAINF-----AGADIANYFCEYI 306 (424)
T ss_dssp HHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEEE-----HHHHHHHHHHTTT
T ss_pred HHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcCC-----hHHHHHHHHHHHH
Confidence 33321 12356899999999999 788899999999876432 3577888877776
Q ss_pred hC
Q 003033 697 TG 698 (855)
Q Consensus 697 tG 698 (855)
.+
T Consensus 307 ~~ 308 (424)
T 3mes_A 307 YD 308 (424)
T ss_dssp EE
T ss_pred hh
Confidence 43
|
| >1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.01 Score=53.73 Aligned_cols=65 Identities=15% Similarity=0.345 Sum_probs=58.3
Q ss_pred cCCCcchhcccCCCcccCCccchHHhhhhhccCC--CCCCCCcCCCCCCCCCCCcHHHHHHHHHHHh
Q 003033 789 FTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSG--HETSPMTNLPLAHKNLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 789 f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg--~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~ 853 (855)
+.|||-.+.+.+|++..-|++|-...|..|+... ..+||+.+..+....+.||..|...|+.++.
T Consensus 22 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~~~~~~~ 88 (112)
T 1jm7_A 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLK 88 (112)
T ss_dssp TSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCSSSHHHHHHHH
T ss_pred CCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCccHHHHHHHHHHHH
Confidence 5799999999999999999999999999999853 3589999999999999999999888888764
|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=94.84 E-value=2.4 Score=44.16 Aligned_cols=57 Identities=16% Similarity=0.081 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 431 QHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487 (855)
Q Consensus 431 ~~~e~~~el~~~~~~~~~l~~~~~~~~~~~~e~e~~~~~~~~~l~~~~~e~~~~~~~ 487 (855)
+.+.+..++.....+...++.++.+.....++++..+......+..++.+....+.+
T Consensus 91 E~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~ 147 (256)
T 3na7_A 91 ELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESL 147 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555555555555555555555544444444444433333
|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=1.7 Score=60.05 Aligned_cols=21 Identities=10% Similarity=0.105 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003033 361 QLAQAMAEAENSRREAFEEAL 381 (855)
Q Consensus 361 ~~~~~~~e~~~~r~e~~~~~~ 381 (855)
+|+++...++.++.|+.+...
T Consensus 1928 KL~et~~~V~~l~~~L~~~~~ 1948 (3245)
T 3vkg_A 1928 KLRDTEAQVKDLQVSLAQKNR 1948 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555544444433
|
| >3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.011 Score=58.06 Aligned_cols=68 Identities=15% Similarity=0.256 Sum_probs=62.3
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w 851 (855)
..+..+.|||-.+++.+|+...-|++|=...|..|+..+..++|+.+..+....+.||.+++..|.++
T Consensus 14 ~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i~~l 81 (170)
T 3hcs_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSL 81 (170)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTS
T ss_pred CCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHHhhc
Confidence 55678999999999999999999999999999999987777999999999999999999999998753
|
| >2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.018 Score=49.09 Aligned_cols=66 Identities=17% Similarity=0.209 Sum_probs=56.9
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w 851 (855)
.....+.|||-.+.+.+|++..-|++|-...|..|+.. ..++|+.+..+. ..+.||..|...++.+
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~-~~~~~~~~l~~~~~~~ 76 (81)
T 2csy_A 11 EEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRA-TPRCYICDQPTG-GIFNPAKELMAKLQKS 76 (81)
T ss_dssp CCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHH-CSBCSSSCCBCC-SCCEECHHHHHHHSSS
T ss_pred cCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHC-CCcCCCcCcccc-ccCCcHHHHHHHHHhh
Confidence 34567899999999999999999999999999999975 678999999997 7888998887766544
|
| >3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.018 Score=51.37 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=57.7
Q ss_pred CcCCCcchhcccCCCc-ccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHH
Q 003033 788 YFTCPIFQEVMQDPHV-AADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 851 (855)
Q Consensus 788 ~f~CPI~qEvm~dP~i-a~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w 851 (855)
.+.|||-.+.+.+|+. ..-|++|=...|..|+.....+||+.+..+....|++|..+...++..
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~~~~~~i~~~~ 86 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQL 86 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECTTHHHHHHHH
T ss_pred CCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhhHHHHHHHHHH
Confidence 4689999999999999 889999999999999998667999999999999999999888777654
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
Probab=93.63 E-value=0.19 Score=63.87 Aligned_cols=28 Identities=7% Similarity=0.178 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHH-----HHHhhcCceeEEEEe
Q 003033 110 ERQDMHNHLDMCL-----LICRQMGVRAEKLDT 137 (855)
Q Consensus 110 ~~~~~~~~l~~y~-----~~C~~~~V~~~~~~i 137 (855)
..++.+++|..+. .-+.+-||....+-.
T Consensus 484 ~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~ 516 (1184)
T 1i84_S 484 TNEKLQQLFNHTMFILEQEEYQREGIEWNFIDF 516 (1184)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCcccccc
Confidence 3356666666554 346677887765443
|
| >1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1 | Back alignment and structure |
|---|
Probab=93.56 E-value=0.041 Score=50.23 Aligned_cols=65 Identities=14% Similarity=0.218 Sum_probs=56.5
Q ss_pred CCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCC-CcHHHHHHHHHH
Q 003033 787 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV-PNLALRSAIQEW 851 (855)
Q Consensus 787 ~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~-pn~~l~~~i~~w 851 (855)
..+.|||-.+++.+|+...-|++|-...|..|+..+..++|+.+..+....+. |+..+...|.++
T Consensus 22 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l 87 (116)
T 1rmd_A 22 KSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSL 87 (116)
T ss_dssp HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHC
T ss_pred CCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHh
Confidence 45789999999999999999999999999999987678999999999988876 567777777653
|
| >4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C | Back alignment and structure |
|---|
Probab=93.31 E-value=0.05 Score=51.38 Aligned_cols=61 Identities=15% Similarity=0.329 Sum_probs=51.0
Q ss_pred cCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHH
Q 003033 789 FTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWL 852 (855)
Q Consensus 789 f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~ 852 (855)
+.|||-.+.+.+|++...|++|-...|..|+.. +.+||+.+..+... .+|..+...|..+.
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~--~~~~~~~~~i~~~~ 114 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR-KIECPICRKDIKSK--TYSLVLDNCINKMV 114 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTT-CSBCTTTCCBCCCE--EECHHHHHHHHHHH
T ss_pred CCCcccCcccCCceECCCCCCccHHHHHHHHHc-CCcCCCCCCcCCCC--CCccchhHHHHHHH
Confidence 579999999999999999999999999999986 67899999998754 24666666666554
|
| >2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.091 Score=42.65 Aligned_cols=55 Identities=11% Similarity=0.224 Sum_probs=48.6
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCC
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNL 838 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l 838 (855)
..+..+.|||-.+.+.+|+...-|++|-...|..|+..+..++|+.+..+...++
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKV 65 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTTC
T ss_pred cCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhhc
Confidence 3456789999999999999999999999999999997677899999999877654
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=92.96 E-value=2.2 Score=53.45 Aligned_cols=39 Identities=10% Similarity=0.160 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHH-----HHHhhcCceeEEEEeccCChhHHHHHHHHH
Q 003033 111 RQDMHNHLDMCL-----LICRQMGVRAEKLDTESESTEKGILELISH 152 (855)
Q Consensus 111 ~~~~~~~l~~y~-----~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~ 152 (855)
.++.+++|..+. .-+.+-||....+-..+. ..++|+|..
T Consensus 458 NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn---~~~idlie~ 501 (1080)
T 2dfs_A 458 NEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDN---QPCINLIEA 501 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCC---HHHHHHHHS
T ss_pred hHHHHHHHHHHhhHHHHHHHhhcCCcccccccccc---HHHHHHHhc
Confidence 355556555543 335566776665433221 234555543
|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 | Back alignment and structure |
|---|
Probab=92.89 E-value=0.95 Score=43.17 Aligned_cols=98 Identities=24% Similarity=0.207 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 003033 381 LRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460 (855)
Q Consensus 381 ~~~~~a~~~~~~a~~~~~~~~~~~~~E~~~rke~e~~l~~~~~e~e~~~~~~~e~~~el~~~~~~~~~l~~~~~~~~~~~ 460 (855)
.+...|++.+.++.+..+.+++.-.....+-..++..|...+.-.+..-+..+++...|..+.......+.++.......
T Consensus 24 ~kLeeaek~adE~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~ 103 (147)
T 2b9c_A 24 QKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKC 103 (147)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666666666655554444556677788888888888888888888888887777777777777777777
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003033 461 KELEQKIISAVELLQNYK 478 (855)
Q Consensus 461 ~e~e~~~~~~~~~l~~~~ 478 (855)
.+++..+...-..++.+.
T Consensus 104 ~eLEeeL~~~~~nlKsLE 121 (147)
T 2b9c_A 104 AELEEELKTVTNNLKSLE 121 (147)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhH
Confidence 777777766655555543
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=92.83 E-value=0.64 Score=47.42 Aligned_cols=87 Identities=20% Similarity=0.199 Sum_probs=59.6
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecc------ccccCC--
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFE------FLASGE-- 678 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg------~~~~~~-- 678 (855)
||.+.|... ..||++.+++.++.|.+.+|.-+-... .+ ..+=+-|..|+|..+|.+.+.+-. ......
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~ 109 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLG 109 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECCC------------CCS
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceecccccccccccCCCChhhc
Confidence 789998654 358999999999999999887652101 01 122334789999999998877432 111122
Q ss_pred ---CCcchhHHHHHHHHHHHHh
Q 003033 679 ---LTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 679 ---~t~ksDVwSfGvvl~ellt 697 (855)
.+.+.=|||||+++|.-+-
T Consensus 110 ~~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 110 YSQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHHHhh
Confidence 2567889999999998776
|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 | Back alignment and structure |
|---|
Probab=92.58 E-value=7.4 Score=37.14 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHhhh
Q 003033 356 DNLYDQLAQAMAEAENSRREAFE---EALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQH 432 (855)
Q Consensus 356 ~~~~~~~~~~~~e~~~~r~e~~~---~~~~~~~a~~~~~~a~~~~~~~~~~~~~E~~~rke~e~~l~~~~~e~e~~~~~~ 432 (855)
..+.+.|..+..+++..+....+ ....+..+..+..+...+.+.+...+.+|..+|.+.|.....-..|+|.+--.+
T Consensus 16 s~LeD~L~~~R~el~~~~~ri~~lE~~r~~~~~l~~~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLTasL 95 (154)
T 2ocy_A 16 SHLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASL 95 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777777776644322211 111222233333344445555555666666666666665555555555554444
|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=92.23 E-value=7.5 Score=40.31 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=17.6
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 003033 424 ELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQ 465 (855)
Q Consensus 424 e~e~~~~~~~e~~~el~~~~~~~~~l~~~~~~~~~~~~e~e~ 465 (855)
+++.++++...+.+++...+++...++..+.+......+++.
T Consensus 98 Eie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~ 139 (256)
T 3na7_A 98 EEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEK 139 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444444444433333333333
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
Probab=92.15 E-value=0.41 Score=60.86 Aligned_cols=9 Identities=33% Similarity=0.571 Sum_probs=4.3
Q ss_pred CCChhhHHh
Q 003033 163 AADKHYKKK 171 (855)
Q Consensus 163 ~~~~~~~r~ 171 (855)
++|..|..|
T Consensus 549 ~td~~~~~k 557 (1184)
T 1i84_S 549 ATDTSFVEK 557 (1184)
T ss_dssp CCHHHHHHH
T ss_pred CChHHHHHH
Confidence 445555444
|
| >2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.92 E-value=0.13 Score=42.96 Aligned_cols=59 Identities=22% Similarity=0.259 Sum_probs=48.6
Q ss_pred CCCCCCcCCCcchhcccCCCccc-CCccchHHhhhhhccCC-CCCCCCcCCCC-CCCCCCCc
Q 003033 783 CEPPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSG-HETSPMTNLPL-AHKNLVPN 841 (855)
Q Consensus 783 ~~~P~~f~CPI~qEvm~dP~ia~-dg~tye~~ai~~wl~sg-~~~sp~T~~~l-~~~~l~pn 841 (855)
...+..+.|||-.+++.+|++.. -|++|-...|..|+... ..++|+.+..+ ....+.||
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n 71 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALSGP 71 (74)
T ss_dssp CCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTTCT
T ss_pred ccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccccccC
Confidence 34567789999999999999998 79999999999999753 36899999974 45556666
|
| >3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.80 E-value=0.028 Score=53.50 Aligned_cols=67 Identities=19% Similarity=0.292 Sum_probs=57.0
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCC---------CCCCCCCcHHHHHHHHH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPL---------AHKNLVPNLALRSAIQE 850 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l---------~~~~l~pn~~l~~~i~~ 850 (855)
.....+.|||-.+++.+|+...-|++|=...|..|+..+..+||+.+..+ ....+.||.+++..|.+
T Consensus 27 ~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~~i~~ 102 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVES 102 (141)
T ss_dssp GCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHHHHHHHHT
T ss_pred cCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHHHHHHHcc
Confidence 34567899999999999999999999999999999988777899988764 34467799999988864
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=91.34 E-value=0.44 Score=52.99 Aligned_cols=46 Identities=24% Similarity=0.303 Sum_probs=35.6
Q ss_pred CceecccccCceee------CCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHHh
Q 003033 647 SIVHGDLKPANILL------DANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 647 ~IvHrDLKp~NILl------d~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ellt 697 (855)
.++|+|+.+.|||+ +.+..+.++|||++..+.. .|=||..+.|...
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~-----~fDlan~f~ew~~ 296 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR-----GFDIGNHFCEWMY 296 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH-----HHHHHHHHHHTTE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc-----hHhHHHHHHHHhc
Confidence 36799999999999 4567899999998765432 5667888888653
|
| >2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.11 E-value=0.21 Score=41.26 Aligned_cols=58 Identities=16% Similarity=0.242 Sum_probs=51.6
Q ss_pred CCCCCcCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcH
Q 003033 784 EPPPYFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNL 842 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~ 842 (855)
.....+.|||-.+.+.+|+.. .-|++|=...|..|+.. ..++|+.+..+...++.+|.
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~ 69 (72)
T 2djb_A 11 ELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQPLSGP 69 (72)
T ss_dssp CCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH-CSSCTTTCCCCCSSCSCCCC
T ss_pred hcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc-CCcCCCcCcccCcccccccC
Confidence 445678999999999999987 89999999999999976 67999999999999998874
|
| >3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.62 E-value=6.8 Score=41.19 Aligned_cols=53 Identities=28% Similarity=0.415 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELK 409 (855)
Q Consensus 357 ~~~~~~~~~~~e~~~~r~e~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~E~~ 409 (855)
.+++.|.....|+++.|++.+++..+.++.-.|+..+.+||+..=....+|-.
T Consensus 98 ~~~~~L~~~~~e~ek~RK~~Ke~w~r~eKk~~dae~~l~KAK~~Y~~r~ee~e 150 (279)
T 3qwe_A 98 DYYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLR 150 (279)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999888888888888888876665666544
|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A | Back alignment and structure |
|---|
Probab=89.58 E-value=13 Score=34.42 Aligned_cols=11 Identities=55% Similarity=0.667 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q 003033 407 ELKRRKEFEEA 417 (855)
Q Consensus 407 E~~~rke~e~~ 417 (855)
+...|++++..
T Consensus 32 ~e~~r~ele~~ 42 (129)
T 2fxo_A 32 SEARRKELEEK 42 (129)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444443
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=88.87 E-value=9.4 Score=47.84 Aligned_cols=13 Identities=8% Similarity=0.237 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHhh
Q 003033 115 HNHLDMCLLICRQ 127 (855)
Q Consensus 115 ~~~l~~y~~~C~~ 127 (855)
.+++..|..+|..
T Consensus 705 ~eF~~RY~~L~~~ 717 (1080)
T 2dfs_A 705 QEFFSRYRVLMKQ 717 (1080)
T ss_dssp HHHHHHHTTTSCG
T ss_pred HHHHHHHHHHCCc
Confidence 3455556655543
|
| >2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.93 E-value=1 Score=36.90 Aligned_cols=55 Identities=15% Similarity=0.341 Sum_probs=47.5
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccC--CCCCCCCcCCCCCCCCC
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDS--GHETSPMTNLPLAHKNL 838 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~s--g~~~sp~T~~~l~~~~l 838 (855)
.....+.|||-.+.+.+|++..-|++|-...|..|+.. +..++|+.+..+...++
T Consensus 16 ~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 72 (73)
T 2ysl_A 16 KLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAI 72 (73)
T ss_dssp CCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCC
T ss_pred hCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccC
Confidence 44567899999999999999999999999999999973 56689999998876654
|
| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=87.75 E-value=0.16 Score=41.51 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=49.8
Q ss_pred CCCCcCCCcchhcccCC-------CcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcH
Q 003033 785 PPPYFTCPIFQEVMQDP-------HVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNL 842 (855)
Q Consensus 785 ~P~~f~CPI~qEvm~dP-------~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~ 842 (855)
....+.|||-.+.+.+| .+..-|++|-...|..|+.. +.++|+.+..+...++.|++
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~ 70 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKRYHPIY 70 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCCCCSCCCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-CCCCCCCCCccChhheeecc
Confidence 34567899999999998 77788999999999999986 47999999999999998874
|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 | Back alignment and structure |
|---|
Probab=86.13 E-value=14 Score=35.19 Aligned_cols=44 Identities=20% Similarity=0.160 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEE 407 (855)
Q Consensus 364 ~~~~e~~~~r~e~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~E 407 (855)
....|+.+++.++.++..+|..||.+.....+...++-....+|
T Consensus 55 ~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLTasLFeE 98 (154)
T 2ocy_A 55 DRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDE 98 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666666666666665555555554444444
|
| >3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.65 E-value=7.5 Score=33.44 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Q 003033 370 ENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELE 426 (855)
Q Consensus 370 ~~~r~e~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~E~~~rke~e~~l~~~~~e~e 426 (855)
+.||.....-..-+...+.+.-.+..-+..+...|.+|+..|..+|..+..-|..+.
T Consensus 3 ~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD 59 (86)
T 3swk_A 3 RELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVD 59 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 344444444334444445555555666667777788898888887775554444333
|
| >1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
Probab=85.59 E-value=0.42 Score=38.49 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=47.3
Q ss_pred CcCCCcchh-cccCCC----cccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCc
Q 003033 788 YFTCPIFQE-VMQDPH----VAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN 841 (855)
Q Consensus 788 ~f~CPI~qE-vm~dP~----ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn 841 (855)
.+.|||-.+ .+.+|. +..-|++|=..-|..|+..+...+|+.+..+...++.||
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 61 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQ 61 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCEEE
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccceee
Confidence 367999999 999995 567899999999999987777889999999998888876
|
| >2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A | Back alignment and structure |
|---|
Probab=85.40 E-value=0.58 Score=54.66 Aligned_cols=25 Identities=12% Similarity=0.235 Sum_probs=15.9
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG 70 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~ 70 (855)
+++-|.|+.. -.++..+.=.+++++
T Consensus 14 gt~e~~vd~~-tt~~ell~~V~~~Lg 38 (575)
T 2i1j_A 14 AELEFAIQQT-TTGKQLFDQVVKTIG 38 (575)
T ss_dssp CEEEEEEETT-CBHHHHHHHHHHHHT
T ss_pred CeEEEEECCC-CCHHHHHHHHHHHcC
Confidence 4566777776 556666666666653
|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A | Back alignment and structure |
|---|
Probab=83.81 E-value=31 Score=32.95 Aligned_cols=38 Identities=24% Similarity=0.206 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASE 401 (855)
Q Consensus 357 ~~~~~~~~~~~e~~~~r~e~~~~~~~~~~a~~~~~~a~~~~~~~~ 401 (855)
.+..+|+++..++.+. |++..+ .+.++-.|..|+...+
T Consensus 4 ~lE~qlkeaae~ad~K----yeEvaR---~E~dLEraEERae~aE 41 (155)
T 2efr_A 4 QLEDKVEELLSKNYHL----ENEVAR---LKKLLERAEERAELSE 41 (155)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHH----HHHHHH---HHHHHHHHHHHHHHHH
Confidence 4556677763333332 223332 4555555555544443
|
| >2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1 | Back alignment and structure |
|---|
Probab=83.29 E-value=23 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHHhhh
Q 003033 400 SESLYAEELKRRKEFEEALANGKLELERMKKQH 432 (855)
Q Consensus 400 ~~~~~~~E~~~rke~e~~l~~~~~e~e~~~~~~ 432 (855)
+...+.+|..+|...|.....-..|++.+.-.+
T Consensus 31 L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 31 LREDIAKENELRTKAEEEADKLNKEVEDLTASL 63 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555555555555555555554443
|
| >2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=82.87 E-value=1.4 Score=36.62 Aligned_cols=57 Identities=18% Similarity=0.351 Sum_probs=47.6
Q ss_pred CCCCcCCCcchhcccCCCc---ccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcH
Q 003033 785 PPPYFTCPIFQEVMQDPHV---AADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNL 842 (855)
Q Consensus 785 ~P~~f~CPI~qEvm~dP~i---a~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~ 842 (855)
....+.|+|-.+.+.+|.. ..-|+.|-...|..|+.. +.++|+.+..+....+.||.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~ 71 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ-HDSCPVCRKSLTGQNTATNP 71 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT-TCSCTTTCCCCCCSCSCCCC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc-CCcCcCcCCccCCcccCCCC
Confidence 3456789999999988754 368999999999999986 57999999999998888763
|
| >3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.02 E-value=16 Score=33.79 Aligned_cols=43 Identities=26% Similarity=0.356 Sum_probs=28.2
Q ss_pred HHHHhchHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 003033 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQ 458 (855)
Q Consensus 416 ~~l~~~~~e~e~~~~~~~e~~~el~~~~~~~~~l~~~~~~~~~ 458 (855)
+.+...|.|+-++++.+..+.-+++..+.++..|+..+.+...
T Consensus 29 ~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~ 71 (129)
T 3tnu_B 29 DDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQ 71 (129)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3456667888888888877777787777777777776665544
|
| >2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.60 E-value=0.22 Score=39.64 Aligned_cols=54 Identities=20% Similarity=0.365 Sum_probs=46.6
Q ss_pred CcCCCcchhcccCC-------CcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcH
Q 003033 788 YFTCPIFQEVMQDP-------HVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNL 842 (855)
Q Consensus 788 ~f~CPI~qEvm~dP-------~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~ 842 (855)
.+.|||-.+.+.+| .+..-|+.|-...|..|+.. +.++|+.+..+...++.|++
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-CSBCTTTCCBCTTTCEEECC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-CCCCCCCCccCCccceeeee
Confidence 35799999999887 67778999999999999987 67999999999988887763
|
| >2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.50 E-value=0.78 Score=39.00 Aligned_cols=61 Identities=23% Similarity=0.321 Sum_probs=49.8
Q ss_pred CCCCCcCCCcchhcccC----CCcccCCccchHHhhhhhccCC--CCCCCCcCCCCCCC---CCCCcHHH
Q 003033 784 EPPPYFTCPIFQEVMQD----PHVAADGFTYEAEALKGWLDSG--HETSPMTNLPLAHK---NLVPNLAL 844 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~d----P~ia~dg~tye~~ai~~wl~sg--~~~sp~T~~~l~~~---~l~pn~~l 844 (855)
.....+.|||-.+.+.+ |.+..-|++|-...|..|+... ..+||+.+..+... .|.+|+.+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~l~~n~~~ 80 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTV 80 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTTSEECTTT
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHHHHHHHHH
Confidence 44566889999999999 9999999999999999999864 47899999987653 55556654
|
| >2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A | Back alignment and structure |
|---|
Probab=80.08 E-value=2 Score=50.16 Aligned_cols=17 Identities=12% Similarity=0.055 Sum_probs=9.0
Q ss_pred HHHhhCCCCCeEEEEec
Q 003033 182 SVRQQAPASCHIWFICN 198 (855)
Q Consensus 182 ~v~k~ap~~C~v~~i~k 198 (855)
.+++.-|.|-.-+|-++
T Consensus 193 ~~a~~lp~YG~~~F~vk 209 (575)
T 2i1j_A 193 KIAQDLEMYGVNYFEIR 209 (575)
T ss_dssp HHHTTSTTTTCEEEEEE
T ss_pred HHHHhccccCCEEEEEE
Confidence 34555666655555443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 855 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 6e-52 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-46 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 9e-46 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-44 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-44 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-44 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-43 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-43 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 8e-43 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-42 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-42 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-42 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-42 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-41 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-41 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-40 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-40 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 8e-40 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-39 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-39 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-39 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-39 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 7e-39 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-38 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-38 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 4e-38 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 9e-38 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-36 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-36 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-36 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-35 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-35 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 6e-35 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-34 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-33 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-33 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-33 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 7e-32 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-31 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-31 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-31 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-30 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-30 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-29 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-29 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-28 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-28 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-28 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-27 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-27 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-27 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-27 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 3e-27 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 8e-27 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-26 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-24 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-24 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-23 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-22 | |
| d1t1ha_ | 78 | g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cre | 9e-21 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-19 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-18 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-15 | |
| d2c2la2 | 80 | g.44.1.2 (A:225-304) STIP1 homology and U box-cont | 1e-14 | |
| d1wgma_ | 98 | g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Hu | 1e-11 | |
| d1jm7a_ | 103 | g.44.1.1 (A:) brca1 RING domain {Human (Homo sapie | 2e-07 | |
| d1f5na1 | 300 | a.114.1.1 (A:284-583) Interferon-induced guanylate | 2e-05 | |
| d1eq1a_ | 166 | a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [Ta | 2e-04 | |
| d2baya1 | 56 | g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 { | 3e-04 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.001 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.003 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (459), Expect = 6e-52
Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 47/270 (17%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+IG G +G++YKG VA+KML+ + Q F+ E+ +L K RH N++ +G
Sbjct: 15 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 593 PEVWT-LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+V ++ SL L I IA + + +LH SI+H
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 652 DLKPANILLDANFVSKLSDF------------------------------EFLASGELTP 681
DLK NI L + K+ DF +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 682 KSDVYSFGIILLRLLTGRP---ALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
+SDVY+FGI+L L+TG+ + ++ + + G L L + + P + +
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAMKR 244
Query: 739 LAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768
L C + R RP + +E + S
Sbjct: 245 LMAECLKKKRDERPLF-PQILASIELLARS 273
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (419), Expect = 1e-46
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 39/258 (15%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
IG+G +G + G R +VA+K + + F E +++++RH NLV L+G
Sbjct: 14 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 71
Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
+V EY+ GSL D L + S L ++ + ++C + +L ++ VH
Sbjct: 72 EKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG---NNFVHR 127
Query: 652 DLKPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSFG 689
DL N+L+ + V+K+SDF E L + + KSDV+SFG
Sbjct: 128 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 187
Query: 690 IILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 748
I+L + + GR + + D P + + C +
Sbjct: 188 ILLWEIYSFGRVPYPRIPLKDV------VPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 241
Query: 749 KSRPELGKDVWRVLEPMR 766
RP + LE ++
Sbjct: 242 AMRPSF-LQLREQLEHIK 258
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 9e-46
Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 41/263 (15%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
++G G +G ++ G H +VA+K L S P F E +++ +++H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
E ++ EY+ NGSL D L + L+ + +A ++ + F+ + +H D
Sbjct: 79 QEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 653 LKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDVY 686
L+ ANIL+ K++DF E + G T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 687 SFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE 745
SFGI+L ++T GR + ++NL P E+L L C +
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPEV------IQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 746 MSRKSRPELGKDVWRVLEPMRAS 768
+ RP + VLE +
Sbjct: 249 ERPEDRPTF-DYLRSVLEDFFTA 270
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 3e-44
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 33/206 (16%)
Query: 523 IEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSK 579
+E +F+ ++G G G ++K + + +A K++H ++ +E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 580 IRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
P +V GA ++ E++ GSL+ L + + Q +++ + L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 638 IFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------------EFL 674
+L H I+H D+KP+NIL+++ KL DF E L
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 675 ASGELTPKSDVYSFGIILLRLLTGRP 700
+ +SD++S G+ L+ + GR
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRY 201
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 158 bits (401), Expect = 5e-44
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 43/281 (15%)
Query: 516 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQE 573
S ++ + E + K+G G YG +Y+G+ + + VA+K L +++ EF +E
Sbjct: 5 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKE 63
Query: 574 IDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
++ +I+HPNLV L+G C + ++ E++ G+L D L + N +S + +AT
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 122
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
++ S + +L + +H DL N L+ N + K++DF
Sbjct: 123 QISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 672 ------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP-L 724
E LA + + KSDV++FG++L + T + +D ++ LL+
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDY 233
Query: 725 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
+ P E++ L C + + RP ++ + E M
Sbjct: 234 RMERPEGCPEKVYELMRACWQWNPSDRPSF-AEIHQAFETM 273
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (399), Expect = 5e-44
Identities = 53/263 (20%), Positives = 104/263 (39%), Gaps = 41/263 (15%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
+IG G +G ++ G + VAIK + + +F +E +++ K+ HP LV L G C
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 593 -PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHG 651
LV+E++ +G L D + + +T + + ++C + + ++H
Sbjct: 71 EQAPICLVFEFMEHGCLSDY--LRTQRGLFAAETLLGMCLDVCEGM---AYLEEACVIHR 125
Query: 652 DLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDV 685
DL N L+ N V K+SDF E + + KSDV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 686 YSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE 745
+SFG+++ + + + ++++ P + + + + C +
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVYQIMNHCWK 240
Query: 746 MSRKSRPELGKDVWRVLEPMRAS 768
+ RP + R L + S
Sbjct: 241 ERPEDRPAF-SRLLRQLAEIAES 262
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (394), Expect = 5e-43
Identities = 71/262 (27%), Positives = 106/262 (40%), Gaps = 39/262 (14%)
Query: 535 KIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC- 592
K+G+G +G ++ G +VAIK L P + P F QE ++ K+RH LV L
Sbjct: 24 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 82
Query: 593 PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGD 652
E +V EY+ GSL + L + +A ++ S + ++ + VH D
Sbjct: 83 EEPIYIVTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 138
Query: 653 LKPANILLDANFVSKLSDF--------------------------EFLASGELTPKSDVY 686
L+ ANIL+ N V K++DF E G T KSDV+
Sbjct: 139 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 198
Query: 687 SFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEM 746
SFGI+L L T + LD + P + P E L +L +C
Sbjct: 199 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECP----ESLHDLMCQCWRK 253
Query: 747 SRKSRPELGKDVWRVLEPMRAS 768
+ RP + + LE S
Sbjct: 254 EPEERPTF-EYLQAFLEDYFTS 274
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (392), Expect = 5e-43
Identities = 52/251 (20%), Positives = 96/251 (38%), Gaps = 41/251 (16%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
+IG G + ++YKGL ++VA L L F++E ++L ++HPN+V
Sbjct: 16 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 75
Query: 591 AC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
+ + LV E + +G+L+ L + + ++ L FLH+
Sbjct: 76 SWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLHTRT 132
Query: 645 PHSIVHGDLKPANILLDA-NFVSKLSDF------------------EFLA----SGELTP 681
P I+H DLK NI + K+ D EF+A +
Sbjct: 133 PP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDE 191
Query: 682 KSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741
DVY+FG+ +L + T + ++ + + P + V ++ +
Sbjct: 192 SVDVYAFGMCMLEMATSEYPYSECQNAAQIYR--RVTSGVKPA--SFDKVAIPEVKEIIE 247
Query: 742 RCCEMSRKSRP 752
C ++ R
Sbjct: 248 GCIRQNKDERY 258
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (393), Expect = 8e-43
Identities = 53/252 (21%), Positives = 94/252 (37%), Gaps = 43/252 (17%)
Query: 535 KIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
++G+G +G +YK + A K++ S + ++ EIDIL+ HPN+V L+ A
Sbjct: 19 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 78
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
++ E+ G+++ + + PL+ + + L +LH + I+H
Sbjct: 79 YYENNLWILIEFCAGGAVDAVM--LELERPLTESQIQVVCKQTLDALNYLHD---NKIIH 133
Query: 651 GDLKPANILLDANFVSKLSDF------------------------------EFLASGELT 680
DLK NIL + KL+DF E
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 681 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740
K+DV+S GI L+ + P ++ L K + W +
Sbjct: 194 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS----SNFKDFL 249
Query: 741 MRCCEMSRKSRP 752
+C E + +R
Sbjct: 250 KKCLEKNVDARW 261
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (391), Expect = 1e-42
Identities = 57/293 (19%), Positives = 102/293 (34%), Gaps = 67/293 (22%)
Query: 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-- 592
IG+G +G +++G R +VA+K+ + + EI +RH N++ + A
Sbjct: 10 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNK 68
Query: 593 ----PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-----C 643
LV +Y +GSL D L N ++ + I++A S L LH
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-----------------------------EFL 674
+I H DLK NIL+ N ++D E L
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 675 AS------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-------------ALDTG 715
E ++D+Y+ G++ + GI ++ Q +
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 244
Query: 716 KLKNLLDP-LAGDWPFVQA-EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766
+ L P + W +A +A + C + +R + + L +
Sbjct: 245 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQLS 296
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (389), Expect = 2e-42
Identities = 55/260 (21%), Positives = 93/260 (35%), Gaps = 42/260 (16%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPN 584
+++ IG G YG K + + K L S+ E+++L +++HPN
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 585 LVTLVGAC----PEVWTLVYEYLPNGSLEDRLS-CKDNSPPLSWQTRIRIATELCSVLIF 639
+V +V EY G L ++ L + +R+ T+L L
Sbjct: 65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124
Query: 640 LH--SCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------E 672
H S H+++H DLKPAN+ LD KL DF E
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 184
Query: 673 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732
+ KSD++S G +L L P + + + + P+
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL------AGKIREGKFRRIPYRY 238
Query: 733 AEQLANLAMRCCEMSRKSRP 752
+++L + R + RP
Sbjct: 239 SDELNEIITRMLNLKDYHRP 258
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 154 bits (390), Expect = 2e-42
Identities = 64/301 (21%), Positives = 115/301 (38%), Gaps = 62/301 (20%)
Query: 514 FFSDFSFSEIEGATHNFDPSL---------KIGEGGYGSIYKGLLR-----HMQVAIKML 559
F F+F + A F + IG G +G + G L+ + VAIK L
Sbjct: 3 FIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL 62
Query: 560 HP-HSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKD 616
++ + +F E I+ + HPN++ L G ++ E++ NGSL+ +
Sbjct: 63 KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF--LRQ 120
Query: 617 NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----- 671
N + + + + + + +L + VH DL NIL+++N V K+SDF
Sbjct: 121 NDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 177
Query: 672 -------------------------EFLASGELTPKSDVYSFGIILLRLLTG--RPALGI 704
E + + T SDV+S+GI++ +++ RP +
Sbjct: 178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237
Query: 705 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 764
T + + + P L L + C + R RP+ + L+
Sbjct: 238 TNQDV-------INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF-GQIVNTLDK 289
Query: 765 M 765
M
Sbjct: 290 M 290
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (384), Expect = 4e-42
Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 42/265 (15%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT 587
+ ++G G +G + G R VAIKM+ S EF +E ++ + H LV
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L G C ++ EY+ NG L + L + Q + + ++C + +L
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLE---S 118
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGEL 679
+H DL N L++ V K+SDF E L +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 680 TPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
+ KSD+++FG+++ + + G+ + +++ L P + +E++
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSET------AEHIAQGLRLYRPHLASEKVYT 232
Query: 739 LAMRCCEMSRKSRPELGKDVWRVLE 763
+ C RP + +L+
Sbjct: 233 IMYSCWHEKADERPTFKILLSNILD 257
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 150 bits (381), Expect = 5e-41
Identities = 59/249 (23%), Positives = 89/249 (35%), Gaps = 42/249 (16%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLV 589
+IG G +G++Y VAIK + Q + +E+ L K+RHPN +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 590 GAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
G LV EY + + + + PL + L +LHS H+
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDL---LEVHKKPLQEVEIAAVTHGALQGLAYLHS---HN 135
Query: 648 IVHGDLKPANILLDANFVSKLSDF------------------------EFLASGELTPKS 683
++H D+K NILL + KL DF + G+ K
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 684 DVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
DV+S GI + L +P L + AL +G W E N C
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWS----EYFRNFVDSC 250
Query: 744 CEMSRKSRP 752
+ + RP
Sbjct: 251 LQKIPQDRP 259
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (378), Expect = 7e-41
Identities = 53/265 (20%), Positives = 100/265 (37%), Gaps = 47/265 (17%)
Query: 534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
+++G G +GS+ +G+ R + VAIK+L + + E +E I+ ++ +P +V L
Sbjct: 15 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 74
Query: 589 VGACPEV-WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C LV E G L L + + ++ + +L +
Sbjct: 75 IGVCQAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLE---EKN 129
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGEL 679
VH DL N+LL +K+SDF E + +
Sbjct: 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 189
Query: 680 TPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
+ +SDV+S+G+ + L+ G+ K + + + + P +L
Sbjct: 190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------MAFIEQGKRMECPPECPPELYA 243
Query: 739 LAMRCCEMSRKSRPELGKDVWRVLE 763
L C + RP+ V + +
Sbjct: 244 LMSDCWIYKWEDRPDF-LTVEQRMR 267
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (375), Expect = 1e-40
Identities = 56/254 (22%), Positives = 101/254 (39%), Gaps = 43/254 (16%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
+F+ +G+G +G++Y + +A+K+L L+ + ++E++I S +RHP
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
N++ L G L+ EY P G++ L Q TEL + L + H
Sbjct: 67 NILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH 123
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------------EFLASGE 678
S ++H D+KP N+LL + K++DF E +
Sbjct: 124 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 180
Query: 679 LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738
K D++S G++ L G+P A + + + +P E +
Sbjct: 181 HDEKVDLWSLGVLCYEFLVGKPPF-------EANTYQETYKRISRVEFTFPDFVTEGARD 233
Query: 739 LAMRCCEMSRKSRP 752
L R + + RP
Sbjct: 234 LISRLLKHNPSQRP 247
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (373), Expect = 2e-40
Identities = 57/269 (21%), Positives = 104/269 (38%), Gaps = 53/269 (19%)
Query: 535 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTL 588
++G G +G++ KG + VA+K+L + E E +++ ++ +P +V +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 589 VGAC-PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G C E W LV E G L L + + + I + ++ + +L +
Sbjct: 74 IGICEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE---ESN 127
Query: 648 IVHGDLKPANILLDANFVSKLSDF----------------------------EFLASGEL 679
VH DL N+LL +K+SDF E + +
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 680 TPKSDVYSFGIILLRLLTG--RPALGIT-KEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736
+ KSDV+SFG+++ + +P G+ EV L+ G+ P ++
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE----RMGCPAGCP----REM 239
Query: 737 ANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
+L C ++RP V L
Sbjct: 240 YDLMNLCWTYDVENRPGF-AAVELRLRNY 267
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 147 bits (371), Expect = 8e-40
Identities = 67/309 (21%), Positives = 119/309 (38%), Gaps = 71/309 (22%)
Query: 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQG-PS 568
+ +E +N + IGEG +G +++ + VA+KML + +
Sbjct: 2 NPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA 61
Query: 569 EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------- 612
+FQ+E ++++ +PN+V L+G C + L++EY+ G L + L
Sbjct: 62 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 121
Query: 613 -------SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 665
PPLS ++ IA ++ + + +L K VH DL N L+ N V
Sbjct: 122 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMV 178
Query: 666 SKLSDF---------------------------EFLASGELTPKSDVYSFGIILLRLLTG 698
K++DF E + T +SDV+++G++L + +
Sbjct: 179 VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 238
Query: 699 R--PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 756
P G+ E + + D P +L NL C RP
Sbjct: 239 GLQPYYGMAHEEV-------IYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSF-C 290
Query: 757 DVWRVLEPM 765
+ R+L+ M
Sbjct: 291 SIHRILQRM 299
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 2e-39
Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 51/273 (18%)
Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTL 588
IG G +G +Y G L + A+K L+ + G S+F E I+ HPN+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 589 VGACPE---VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
+G C +V Y+ +G L + ++ + + + I ++ +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGM---KFLAS 148
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF-----------------------------EFLAS 676
VH DL N +LD F K++DF E L +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 208
Query: 677 GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
+ T KSDV+SFG++L L+T G P + + + LL P P +
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP--EYCP----DP 262
Query: 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768
L + ++C + RP ++ + + ++
Sbjct: 263 LYEVMLKCWHPKAEMRPSF-SELVSRISAIFST 294
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 4e-39
Identities = 64/268 (23%), Positives = 102/268 (38%), Gaps = 48/268 (17%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRHPNL 585
++D +GEG YG + + R VA+K++ ++ P ++EI I + H N+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
V G + L EY G L DR+ + R +L + +++LH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHG- 121
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF---------------------------EFLAS 676
I H D+KP N+LLD K+SDF E L
Sbjct: 122 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 677 GEL-TPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734
E DV+S GI+L +L G + Q D + K L+P W + +
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----WKKIDSA 235
Query: 735 QLANLAMRCCEMSRKSRP---ELGKDVW 759
L + + +R ++ KD W
Sbjct: 236 -PLALLHKILVENPSARITIPDIKKDRW 262
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 5e-39
Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 50/285 (17%)
Query: 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQG-PSEFQQE 573
+EI IG G +G +YKG+L+ + VAIK L + +F E
Sbjct: 2 TEIH--PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE 59
Query: 574 IDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 631
I+ + H N++ L G + ++ EY+ NG+L+ ++ S + +
Sbjct: 60 AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF--LREKDGEFSVLQLVGMLR 117
Query: 632 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------- 671
+ + + +L + VH DL NIL+++N V K+SDF
Sbjct: 118 GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 174
Query: 672 --------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 723
E ++ + T SDV+SFGI++ ++T +K + D
Sbjct: 175 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-----MKAINDG 229
Query: 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768
P + L M+C + R RP+ D+ +L+ + +
Sbjct: 230 FRLPTPMDCPSAIYQLMMQCWQQERARRPKF-ADIVSILDKLIRA 273
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 6e-39
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 46/255 (18%)
Query: 535 KIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLV 586
K+G+G +G + +G + + VA+K L P L + +F +E++ + + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 587 TLVGACPEVWT-LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L G +V E P GSL DR + + T R A ++ + +L S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSRYAVQVAEGMGYLES--- 129
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLASG 677
+H DL N+LL + K+ DF E L +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 678 ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
+ SD + FG+ L + T I L + P D P + +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP----QDIY 245
Query: 738 NLAMRCCEMSRKSRP 752
N+ ++C + RP
Sbjct: 246 NVMVQCWAHKPEDRP 260
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 7e-39
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 70/299 (23%)
Query: 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPH-SLQGPSE 569
++D F + IGEG +G + K ++ M AIK + + S +
Sbjct: 9 WNDIKFQD------------VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56
Query: 570 FQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRL-------------S 613
F E+++L K+ HPN++ L+GAC L EY P+G+L D L
Sbjct: 57 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116
Query: 614 CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-- 671
+ LS Q + A ++ + +L +H DL NIL+ N+V+K++DF
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 173
Query: 672 ----------------------EFLASGELTPKSDVYSFGIILLRLLTGR--PALGITKE 707
E L T SDV+S+G++L +++ P G+T
Sbjct: 174 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 233
Query: 708 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766
Y + L + P +++ +L +C RP + L M
Sbjct: 234 ELY-------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRML 284
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 1e-38
Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 40/247 (16%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
KIG+G G++Y + +VAI+ ++ EI ++ + ++PN+V + +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ +V EYL GSL D ++ + + E L FLHS + ++H
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIH 139
Query: 651 GDLKPANILLDANFVSKLSDF-------------------------EFLASGELTPKSDV 685
D+K NILL + KL+DF E + PK D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 686 YSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE 745
+S GI+ + ++ G P ++ + P + + A + RC +
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAI-FRDFLNRCLD 255
Query: 746 MSRKSRP 752
M + R
Sbjct: 256 MDVEKRG 262
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (359), Expect = 1e-38
Identities = 62/271 (22%), Positives = 100/271 (36%), Gaps = 50/271 (18%)
Query: 535 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGPSE-FQQEIDILSKIRHPNLVTL 588
IGEG +G +++G+ + VAIK + E F QE + + HP++V L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 589 VGACPEVWT-LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS 647
+G E ++ E G L + L + I A +L + L +L S +
Sbjct: 74 IGVITENPVWIIMELCTLGELRSF--LQVRKYSLDLASLILYAYQLSTALAYLESKR--- 128
Query: 648 IVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTP 681
VH D+ N+L+ +N KL DF E + T
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 682 KSDVYSFGIILLRLLTG--RPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739
SDV+ FG+ + +L +P G+ P+ + P L +L
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGERLPMPPNCP----PTLYSL 241
Query: 740 AMRCCEMSRKSRP---ELGKDVWRVLEPMRA 767
+C RP EL + +LE +A
Sbjct: 242 MTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 143 bits (362), Expect = 4e-38
Identities = 49/249 (19%), Positives = 90/249 (36%), Gaps = 40/249 (16%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
++G G +G +++ R A K + ++EI +S +RHP LV L A
Sbjct: 33 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
++YE++ G L ++++ + N +S + ++C L +H ++ VH
Sbjct: 93 EDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHE---NNYVH 147
Query: 651 GDLKPANILL--DANFVSKLSDF------------------------EFLASGELTPKSD 684
DLKP NI+ + KL DF E + +D
Sbjct: 148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 207
Query: 685 VYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
++S G++ LL+G G + N+ D E + +
Sbjct: 208 MWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS----EDGKDFIRKL 263
Query: 744 CEMSRKSRP 752
+R
Sbjct: 264 LLADPNTRM 272
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 9e-38
Identities = 62/278 (22%), Positives = 104/278 (37%), Gaps = 69/278 (24%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKI-RHPNL 585
+G G +G + +QVA+KML + E+ +++++ H N+
Sbjct: 44 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK--------------------DNSPPLSW 623
V L+GAC L++EY G L + L K ++ L++
Sbjct: 104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 163
Query: 624 QTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------ 671
+ + A ++ + FL S VH DL N+L+ V K+ DF
Sbjct: 164 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 220
Query: 672 ---------------EFLASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALDT 714
E L G T KSDV+S+GI+L + + P GI + +
Sbjct: 221 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF---- 276
Query: 715 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 752
K + + D PF E++ + C + RP
Sbjct: 277 --YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP 312
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 1e-36
Identities = 59/284 (20%), Positives = 103/284 (36%), Gaps = 61/284 (21%)
Query: 535 KIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKI-RHPNL 585
+G G +G + + M VA+KML P + E+ +LS + H N+
Sbjct: 30 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 586 VTLVGAC--PEVWTLVYEYLPNGSLEDRLSCK---------------DNSPPLSWQTRIR 628
V L+GAC ++ EY G L + L K D+ L + +
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
+ ++ + FL S + +H DL NILL ++K+ DF
Sbjct: 150 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 672 ----------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 721
E + + T +SDV+S+GI L L + + V K +
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF----YKMIK 262
Query: 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
+ P ++ ++ C + RP K + +++E
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTF-KQIVQLIEKQ 305
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 139 bits (350), Expect = 2e-36
Identities = 47/248 (18%), Positives = 92/248 (37%), Gaps = 38/248 (15%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
++G G +G +++ + + K ++ + EI I++++ HP L+ L A
Sbjct: 36 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
L+ E+L G L DR+ +S I + C L +H HSIVH
Sbjct: 96 EDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVH 150
Query: 651 GDLKPANILLDANFVS--KLSDF------------------------EFLASGELTPKSD 684
D+KP NI+ + S K+ DF E + + +D
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTD 210
Query: 685 VYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCC 744
+++ G++ LL+G +++ + + + + V E +
Sbjct: 211 MWAIGVLGYVLLSGLSPFAGEDDLETLQNV--KRCDWEFDEDAFSSVSPE-AKDFIKNLL 267
Query: 745 EMSRKSRP 752
+ + R
Sbjct: 268 QKEPRKRL 275
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 2e-36
Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 41/249 (16%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+G G +G +++ + K + ++EI IL+ RH N++ L +
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70
Query: 593 --PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
E +++E++ + +R+ ++ L+ + + ++C L FLHS H+I H
Sbjct: 71 ESMEELVMIFEFISGLDIFERI--NTSAFELNEREIVSYVHQVCEALQFLHS---HNIGH 125
Query: 651 GDLKPANILLDA--NFVSKLSDF------------------------EFLASGELTPKSD 684
D++P NI+ + K+ +F E ++ +D
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 685 VYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRC 743
++S G ++ LL+G P L T + + + + + R
Sbjct: 186 MWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS----IEAMDFVDRL 241
Query: 744 CEMSRKSRP 752
RKSR
Sbjct: 242 LVKERKSRM 250
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 136 bits (343), Expect = 3e-36
Identities = 56/271 (20%), Positives = 104/271 (38%), Gaps = 48/271 (17%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLV 589
+G GG ++ H VA+K+L + PS F++E + + HP +V +
Sbjct: 14 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73
Query: 590 GAC------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
+ +V EY+ +L D + + P++ + I + + C L F H
Sbjct: 74 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ- 129
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF----------------------------EFLA 675
+ I+H D+KPANI++ A K+ DF E
Sbjct: 130 --NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 187
Query: 676 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
+ +SDVYS G +L +LTG P V A ++ P + + +
Sbjct: 188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ--HVREDPIPPSARHEGL-SAD 244
Query: 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766
L + ++ + ++R + ++ L +
Sbjct: 245 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 275
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 2e-35
Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 56/299 (18%)
Query: 512 PQFFSDFSF---SEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-------QVAIKMLHP 561
P++FS E E A S ++G+G +G +Y+G+ + + +VAIK ++
Sbjct: 1 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 60
Query: 562 -HSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNS 618
S++ EF E ++ + ++V L+G + ++ E + G L+ L +
Sbjct: 61 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 120
Query: 619 -------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671
P S I++A E+ + +L++ + VH DL N ++ +F K+ DF
Sbjct: 121 MANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 177
Query: 672 ---------------------------EFLASGELTPKSDVYSFGIILLRLLTGRPALGI 704
E L G T SDV+SFG++L + T
Sbjct: 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 237
Query: 705 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763
+ L+ +++ D P + L L C + + K RP ++ ++
Sbjct: 238 GLSNEQV-----LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIK 290
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 132 bits (334), Expect = 4e-35
Identities = 58/269 (21%), Positives = 98/269 (36%), Gaps = 55/269 (20%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---------FQQEIDIL 577
N++P +G G + + + + + A+K++ S +E+DIL
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 578 SKIR-HPNLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELC 634
K+ HPN++ L LV++ + G L D L+ LS + +I L
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRALL 120
Query: 635 SVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------- 671
V+ LH +IVH DLKP NILLD + KL+DF
Sbjct: 121 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLA 177
Query: 672 -------EFLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDP 723
+ D++S G+I+ LL G P + + + P
Sbjct: 178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP 237
Query: 724 LAGDWPFVQAEQLANLAMRCCEMSRKSRP 752
D+ + + +L R + + R
Sbjct: 238 EWDDYS----DTVKDLVSRFLVVQPQKRY 262
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 6e-35
Identities = 57/307 (18%), Positives = 112/307 (36%), Gaps = 50/307 (16%)
Query: 530 FDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHP-HSLQGPSEFQQEIDILSKIRH 582
F +G G +G++YKGL + VAIK L S + E E +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 583 PNLVTLVGACPE-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
P++ L+G C L+ + +P G L D +++ + Q + ++ + +L
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDY--VREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------------EFL 674
+VH DL N+L+ K++DF E +
Sbjct: 129 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 675 ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733
T +SDV+S+G+ + L+T G + L P +
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI------SSILEKGERLPQPPICT 239
Query: 734 EQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPI 793
+ + ++C + SRP+ +++ M + +ER P
Sbjct: 240 IDVYMIMVKCWMIDADSRPKF-RELIIEFSKMARDP--QRYLVIQGDERMHLPSPTDSNF 296
Query: 794 FQEVMQD 800
++ +M +
Sbjct: 297 YRALMDE 303
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (329), Expect = 2e-34
Identities = 53/258 (20%), Positives = 88/258 (34%), Gaps = 47/258 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHP 583
+F +GEG + ++ + AIK+L + + +E D++S++ HP
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
V L E Y NG L + E+ S L +LH
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLH 125
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF---------------------------EFL 674
I+H DLKP NILL+ + +++DF E L
Sbjct: 126 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182
Query: 675 ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734
SD+++ G I+ +L+ G P E KL+ D+P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE-------YDFPEKFFP 235
Query: 735 QLANLAMRCCEMSRKSRP 752
+ +L + + R
Sbjct: 236 KARDLVEKLLVLDATKRL 253
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (324), Expect = 2e-33
Identities = 54/251 (21%), Positives = 86/251 (34%), Gaps = 43/251 (17%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGA 591
+G G + + + VAIK + +L+G + EI +L KI+HPN+V L
Sbjct: 16 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 75
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
L+ + + G L DR+ K + + R+ ++ + +LH IV
Sbjct: 76 YESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG---IV 129
Query: 650 HGDLKPANILL---DANFVSKLSDFEF------------------------LASGELTPK 682
H DLKP N+L D + +SDF LA +
Sbjct: 130 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 189
Query: 683 SDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 741
D +S G+I LL G P + P D + +
Sbjct: 190 VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS----DSAKDFIR 245
Query: 742 RCCEMSRKSRP 752
E + R
Sbjct: 246 HLMEKDPEKRF 256
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 128 bits (322), Expect = 3e-33
Identities = 57/253 (22%), Positives = 94/253 (37%), Gaps = 42/253 (16%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHP 583
+F +G G +G ++ RH A+K+L + + E +LS + HP
Sbjct: 5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 64
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
++ + G + ++ +Y+ G L L P A E+C L +LH
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP---NPVAKFYAAEVCLALEYLH 121
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------EFLASGEL 679
S I++ DLKP NILLD N K++DF E +++
Sbjct: 122 S---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPY 178
Query: 680 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739
D +SFGI++ +L G Y +T K + +P E + +L
Sbjct: 179 NKSIDWWSFGILIYEMLAGYTPF-------YDSNTMKTYEKILNAELRFPPFFNEDVKDL 231
Query: 740 AMRCCEMSRKSRP 752
R R
Sbjct: 232 LSRLITRDLSQRL 244
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 5e-33
Identities = 62/288 (21%), Positives = 110/288 (38%), Gaps = 66/288 (22%)
Query: 535 KIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHP 583
+GEG +G + +VA+KML + + S+ E++++ I +H
Sbjct: 20 PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 79
Query: 584 NLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIR 628
N++ L+GAC + ++ EY G+L + L + + LS + +
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 139
Query: 629 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------- 671
A ++ + +L S +H DL N+L+ + V K++DF
Sbjct: 140 CAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 672 ----------EFLASGELTPKSDVYSFGIILLRLLTG--RPALGITKEVQYALDTGKLKN 719
E L T +SDV+SFG++L + T P G+ E + K
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-------KL 249
Query: 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767
L + D P +L + C RP K + L+ + A
Sbjct: 250 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRIVA 296
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 125 bits (315), Expect = 7e-32
Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 46/259 (17%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQE---IDILSKI 580
+F IG GG+G +Y A+K L + QG + E + ++S
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 581 RHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLI 638
P +V + A P+ + + + + G L LS S A E+ L
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLE 121
Query: 639 FLHSCKPHSIVHGDLKPANILLDANFVSKLSDF-----------------------EFLA 675
+H+ +V+ DLKPANILLD + ++SD E L
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ 178
Query: 676 SGE-LTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733
G +D +S G +L +LL G P + ++ +D L + + P +
Sbjct: 179 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----ELPDSFS 233
Query: 734 EQLANLAMRCCEMSRKSRP 752
+L +L + R
Sbjct: 234 PELRSLLEGLLQRDVNRRL 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 2e-31
Identities = 49/255 (19%), Positives = 94/255 (36%), Gaps = 48/255 (18%)
Query: 536 IGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC 592
+G G G + + + + A+KML + ++E+++ + + P++V +V
Sbjct: 20 LGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVY 74
Query: 593 PEVWT------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 646
++ +V E L G L R+ + + I + + +LHS
Sbjct: 75 ENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHS---I 130
Query: 647 SIVHGDLKPANILLDA---NFVSKLSDF------------------------EFLASGEL 679
+I H D+KP N+L + N + KL+DF E L +
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY 190
Query: 680 TPKSDVYSFGIILLRLLTGRPAL--GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
D++S G+I+ LL G P + + T + +W V +E++
Sbjct: 191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-SEEVK 249
Query: 738 NLAMRCCEMSRKSRP 752
L + R
Sbjct: 250 MLIRNLLKTEPTQRM 264
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 3e-31
Identities = 54/231 (23%), Positives = 83/231 (35%), Gaps = 53/231 (22%)
Query: 506 SSSSHMPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS 563
++ P + S+++ + IG G +G +Y+ L VAIK +
Sbjct: 8 ATPGQGPDRPQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKV---- 53
Query: 564 LQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT--------LVYEYLPNGSLEDRLSCK 615
LQ +E+ I+ K+ H N+V L LV +Y+P
Sbjct: 54 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 616 DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF--- 671
L +L L ++HS I H D+KP N+LLD + V KL DF
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 672 ----------------------EFLASGELTPKSDVYSFGIILLRLLTGRP 700
+ + T DV+S G +L LL G+P
Sbjct: 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 3e-31
Identities = 55/257 (21%), Positives = 90/257 (35%), Gaps = 46/257 (17%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSK-IRH 582
+F +G+G +G ++ + AIK L + + E +LS H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 583 PNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
P L + E V EYL G L + + A E+ L FL
Sbjct: 63 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQFL 119
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF-------------------------EFLA 675
HS IV+ DLK NILLD + K++DF E L
Sbjct: 120 HS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL 176
Query: 676 SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
+ D +SFG++L +L G+ + D +L + + +P ++
Sbjct: 177 GQKYNHSVDWWSFGVLLYEMLIGQSPF-------HGQDEEELFHSIRMDNPFYPRWLEKE 229
Query: 736 LANLAMRCCEMSRKSRP 752
+L ++ + R
Sbjct: 230 AKDLLVKLFVREPEKRL 246
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 3e-30
Identities = 55/258 (21%), Positives = 93/258 (36%), Gaps = 39/258 (15%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGA 591
IGEG YG + ++VAIK + P Q +EI IL + RH N++ +
Sbjct: 15 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 74
Query: 592 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
P + + YL + L + LS ++ L ++HS +++
Sbjct: 75 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVL 131
Query: 650 HGDLKPANILLDANFVSKLSDF----------------------------EFLASGEL-T 680
H DLKP+N+LL+ K+ DF E + + + T
Sbjct: 132 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 191
Query: 681 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 740
D++S G IL +L+ RP + L L P D + + N
Sbjct: 192 KSIDIWSVGCILAEMLSNRPIFPGKHYLD--QLNHILGILGSPSQEDLNCIINLKARNYL 249
Query: 741 MRCCEMSRKSRPELGKDV 758
+ ++ L +
Sbjct: 250 LSLPHKNKVPWNRLFPNA 267
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 118 bits (297), Expect = 4e-30
Identities = 45/260 (17%), Positives = 82/260 (31%), Gaps = 51/260 (19%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
KIG G +G IY G +VAIK+ + + E I ++ + + C
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
+ +V E L + S S +T + +A ++ S + ++HS + +
Sbjct: 72 GAEGDYNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFI 125
Query: 650 HGDLKPANIL---LDANFVSKLSDF--------------------------------EFL 674
H D+KP N L + + DF
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 185
Query: 675 ASGELTPKSDVYSFGIILLRLLTGRPAL--GITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732
E + + D+ S G +L+ G + + K + P+
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245
Query: 733 AEQLANLAMRCCEMSRKSRP 752
+E A C + +P
Sbjct: 246 SE-FATYLNFCRSLRFDDKP 264
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 2e-29
Identities = 56/283 (19%), Positives = 97/283 (34%), Gaps = 60/283 (21%)
Query: 535 KIGEGGYGSIYKGLLRHM-------QVAIKMLHPHSLQGP-SEFQQEIDILSKIRH-PNL 585
+G G +G + + + VA+KML + E+ IL I H N+
Sbjct: 20 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 79
Query: 586 VTLVGACPE---VWTLVYEYLPNGSLEDRLSCKDNSP-------------PLSWQTRIRI 629
V L+GAC + ++ E+ G+L L K N L+ + I
Sbjct: 80 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 139
Query: 630 ATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------ 671
+ ++ + FL S +H DL NILL V K+ DF
Sbjct: 140 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 196
Query: 672 ---------EFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 722
E + T +SDV+SFG++L + + + ++ + L +
Sbjct: 197 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF----CRRLKE 252
Query: 723 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
P ++ + C RP ++ L +
Sbjct: 253 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNL 294
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 2e-29
Identities = 56/257 (21%), Positives = 94/257 (36%), Gaps = 49/257 (19%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGP------SEFQQEIDILSKIRHPNLV 586
++G G + + K + +Q A K + + + ++E+ IL +I+HPN++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 587 TLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 644
TL L+ E + G L D L+ + ++ + + +LHS
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFD---FLAEKESLTEEEATEFLKQILNGVYYLHS-- 131
Query: 645 PHSIVHGDLKPANILLDANFVS----KLSDF------------------------EFLAS 676
I H DLKP NI+L V K+ DF E +
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 677 GELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735
L ++D++S G+I LL+G P LG TK+ A + D +
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS----AL 246
Query: 736 LANLAMRCCEMSRKSRP 752
+ R K R
Sbjct: 247 AKDFIRRLLVKDPKKRM 263
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (287), Expect = 1e-28
Identities = 63/280 (22%), Positives = 101/280 (36%), Gaps = 48/280 (17%)
Query: 526 ATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQG--PSEFQQEIDILSKI 580
A ++ +IGEG YG ++K VA+K + + + P +E+ +L +
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 581 ---RHPNLVTLVGACPEVWT-------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIA 630
HPN+V L C T LV+E++ K P + +T +
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDMM 122
Query: 631 TELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF----------------- 673
+L L FLHS H +VH DLKP NIL+ ++ KL+DF
Sbjct: 123 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 179
Query: 674 -------LASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLA 725
L D++S G I + +P G + Q L + P
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK---ILDVIGLPGE 236
Query: 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765
DWP A + + K ++ + +L
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKC 276
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 4e-28
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 41/201 (20%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE-----FQQEIDILSKIRHPNLVT 587
+GEG + ++YK ++ VAIK + + +EI +L ++ HPN++
Sbjct: 5 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64
Query: 588 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 645
L+ A +LV++++ KDNS L+ L +LH
Sbjct: 65 LLDAFGHKSNISLVFDFMETDLEVI---IKDNSLVLTPSHIKAYMLMTLQGLEYLHQ--- 118
Query: 646 HSIVHGDLKPANILLDANFVSKLSDF--------------------------EFLASGEL 679
H I+H DLKP N+LLD N V KL+DF +
Sbjct: 119 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 178
Query: 680 TPKSDVYSFGIILLRLLTGRP 700
D+++ G IL LL P
Sbjct: 179 GVGVDMWAVGCILAELLLRVP 199
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 112 bits (281), Expect = 6e-28
Identities = 43/265 (16%), Positives = 78/265 (29%), Gaps = 59/265 (22%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
+IGEG +G I++G LL + QVAIK S + + E + + V
Sbjct: 12 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69
Query: 593 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
LV + L + S +T A ++ + + +H S+V
Sbjct: 70 GQEGLHNVLVIDLLGPSLEDL---LDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLV 123
Query: 650 HGDLKPANILLDANFVS-----KLSDF--------------------------------E 672
+ D+KP N L+ + DF
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183
Query: 673 FLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP-----LAGD 727
E + + D+ + G + + L G K ++ L
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAG 243
Query: 728 WPFVQAEQLANLAMRCCEMSRKSRP 752
+P E+ ++ + P
Sbjct: 244 FP----EEFYKYMHYARNLAFDATP 264
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 112 bits (281), Expect = 2e-27
Identities = 51/304 (16%), Positives = 104/304 (34%), Gaps = 58/304 (19%)
Query: 478 KKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFFSDFSFSEIEGATHNFDPSLKIG 537
KK ++ ++ A + + L+K + +++ + QF + +G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQF-------DRIK---------TLG 50
Query: 538 EGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHPNLVTLVGAC 592
G +G + + A+K+L + + E IL + P LV L +
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 PEVWTL--VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650
+ L V EY+ G + L S A ++ +LHS +++
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIY 164
Query: 651 GDLKPANILLDANFVSKLSDF----------------------EFLASGELTPKSDVYSF 688
DLKP N+L+D +++DF E + S D ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 689 GIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 748
G+++ + G P +A ++ + +P + L +L ++
Sbjct: 225 GVLIYEMAAGYPPF-------FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
Query: 749 KSRP 752
R
Sbjct: 278 TKRF 281
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 110 bits (276), Expect = 2e-27
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 41/230 (17%)
Query: 535 KIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGA 591
KIGEG YG +YK + + A+K + PS +EI IL +++H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 592 CPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 649
LV+E+L + C+ L T +L + + + H ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 650 HGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPKS 683
H DLKP N+L++ K++DF + S + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 684 DVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQ 732
D++S G I ++ G P G+++ Q + L P + +WP V
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMR---IFRILGTPNSKNWPNVT 229
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-27
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 37/204 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPN 584
NF KIGEG YG +YK + VA+K + + PS +EI +L ++ HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
+V L+ LV+E+L + + +L L F HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLK--KFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF--------------------------EFLAS 676
H ++H DLKP N+L++ KL+DF L
Sbjct: 121 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 677 GELTPKSDVYSFGIILLRLLTGRP 700
+ D++S G I ++T R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA 201
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 3e-27
Identities = 53/261 (20%), Positives = 90/261 (34%), Gaps = 45/261 (17%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE---FQQEIDILSKIRHP 583
+FD +G+G +G + + A+K+L + E E +L RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 584 NLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH 641
L L A + V EY G L LS + + E+ S L +LH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLH 122
Query: 642 SCKPHSIVHGDLKPANILLDANFVSKLSDFEF-------------------------LAS 676
S +V+ D+K N++LD + K++DF L
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 677 GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 736
+ D + G+++ ++ GR Y D +L L+ +P + +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF-------YNQDHERLFELILMEEIRFPRTLSPEA 232
Query: 737 ANLAMRCCEMSRKSRPELGKD 757
+L + K R G
Sbjct: 233 KSLLAGLLKKDPKQRLGGGPS 253
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 3e-27
Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 54/270 (20%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG 590
KIG+G +G ++K R +VA+K + + + P +EI IL ++H N+V L+
Sbjct: 17 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 76
Query: 591 ACPEVWT----------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 640
C + LV+++ + + + R+ L + L ++
Sbjct: 77 ICRTKASPYNRCKGSIYLVFDFCEHDLAGL---LSNVLVKFTLSEIKRVMQMLLNGLYYI 133
Query: 641 HSCKPHSIVHGDLKPANILLDANFVSKLSDF----------------------------- 671
H K I+H D+K AN+L+ + V KL+DF
Sbjct: 134 HRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 672 -EFLASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWP 729
L + P D++ G I+ + T P + G T++ Q AL + WP
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI---SQLCGSITPEVWP 247
Query: 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759
V +L RK + L V
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVR 277
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 8e-27
Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 45/259 (17%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
+G G YG++ + +VAIK L+ +E+ +L +RH N++ L+
Sbjct: 25 PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84
Query: 591 ACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
T LV ++ G+ +L L + ++ L ++H+
Sbjct: 85 VFTPDETLDDFTDFYLVMPFM--GTDLGKLM---KHEKLGEDRIQFLVYQMLKGLRYIHA 139
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF-----------------------EFLASGEL 679
H DLKP N+ ++ + K+ DF L
Sbjct: 140 AGII---HRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY 196
Query: 680 TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739
T D++S G I+ ++TG+ + + +K P A +Q+++ N
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLD--QLKEIMKVTGTPPAEFVQRLQSDEAKNY 254
Query: 740 AMRCCEMSRKSRPELGKDV 758
E+ +K + +
Sbjct: 255 MKGLPELEKKDFASILTNA 273
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 4e-26
Identities = 46/255 (18%), Positives = 89/255 (34%), Gaps = 55/255 (21%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE------FQQEIDILSKIR--HPN 584
+G GG+GS+Y G+ ++ VAIK + + E E+ +L K+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 585 LVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
++ L+ P+ + L+ E + L + ++ + H+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHN 128
Query: 643 CKPHSIVHGDLKPANILLDAN-FVSKLSDF-----------------------EFLASGE 678
++H D+K NIL+D N KL DF E++
Sbjct: 129 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHR 185
Query: 679 L-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737
+ V+S GI+L ++ G +E+ G++ + + +
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RGQV---------FFRQRVSSECQ 232
Query: 738 NLAMRCCEMSRKSRP 752
+L C + RP
Sbjct: 233 HLIRWCLALRPSDRP 247
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 1e-24
Identities = 55/229 (24%), Positives = 87/229 (37%), Gaps = 39/229 (17%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
KIGEG YG+++K R H VA+K + PS +EI +L +++H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 591 ACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 648
TLV+E+ + SC + + +L L F H ++
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD---PEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 649 VHGDLKPANILLDANFVSKLSDF--------------------------EFLASGELTPK 682
+H DLKP N+L++ N KL++F + +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 683 SDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 731
D++S G I L L +V L + L P WP +
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKR-IFRLLGTPTEEQWPSM 230
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 101 bits (253), Expect = 4e-24
Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 46/237 (19%)
Query: 500 KSRKEASSSSHMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAI 556
++R ++H P+ + D+ +E G ++ K+G G Y +++ + + +V +
Sbjct: 6 RARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 65
Query: 557 KMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE----VWTLVYEYLPNGSLEDR 611
K+L P + + ++EI IL +R PN++TL + LV+E++ N +
Sbjct: 66 KILKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 122
Query: 612 LSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSD 670
L+ E+ L + HS I+H D+KP N+++D + +L D
Sbjct: 123 YQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLID 173
Query: 671 F---EFLASGEL----------------------TPKSDVYSFGIILLRLLTGRPAL 702
+ EF G+ D++S G +L ++ +
Sbjct: 174 WGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 3e-23
Identities = 52/259 (20%), Positives = 96/259 (37%), Gaps = 45/259 (17%)
Query: 535 KIGEGGYGSIYKGLLRH--MQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVG 590
+G G YGS+ ++VA+K L S+ +E+ +L ++H N++ L+
Sbjct: 25 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 591 ACPEVWTL-------VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
+L + +L L + + C+ L+ + ++ L ++HS
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHS- 139
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF-----------------------EFLASGELT 680
I+H DLKP+N+ ++ + K+ DF L
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 681 PKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANL 739
D++S G I+ LLTGR G Q L L+ + P A + +E N
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL---ILRLVGTPGAELLKKISSESARNY 254
Query: 740 AMRCCEMSRKSRPELGKDV 758
+M + + +
Sbjct: 255 IQSLTQMPKMNFANVFIGA 273
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 1e-22
Identities = 55/269 (20%), Positives = 94/269 (34%), Gaps = 49/269 (18%)
Query: 529 NFDPSLKIGEGGYGSIYKGLLRHMQ-----VAIKMLHPHSL----QGPSEFQQEIDILSK 579
NF+ +G G YG ++ A+K+L ++ + + E +L
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84
Query: 580 IRH-PNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSV 636
IR P LVTL A L+ +Y+ G L LS ++ Q + +
Sbjct: 85 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG------EI 138
Query: 637 LIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF------------------------- 671
++ L I++ D+K NILLD+N L+DF
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 198
Query: 672 -EFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 728
+ + G+ D +S G+++ LLTG + E + + +P +
Sbjct: 199 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP---PY 255
Query: 729 PFVQAEQLANLAMRCCEMSRKSRPELGKD 757
P + +L R K R G
Sbjct: 256 PQEMSALAKDLIQRLLMKDPKKRLGCGPR 284
|
| >d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 78 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: E3 ubiquitin ligase PUB14 species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 84.7 bits (209), Expect = 9e-21
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 843
E P YF CPI E+M+DP + + G TYE +++ WLD+GH+T P + L H L PN
Sbjct: 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 63
Query: 844 LRSAIQEWLQQH 855
L+S I W + +
Sbjct: 64 LKSLIALWCESN 75
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.2 bits (220), Expect = 1e-19
Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 45/202 (22%)
Query: 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 590
IG G G + VAIK L +E+ ++ + H N+++L+
Sbjct: 24 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 591 ACPEVWT--------LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 642
T LV E + + D + + ++ + LHS
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD------HERMSYLLYQMLCGIKHLHS 137
Query: 643 CKPHSIVHGDLKPANILLDANFVSKLSDF------------------------EFLASGE 678
+H DLKP+NI++ ++ K+ DF E +
Sbjct: 138 AGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 679 LTPKSDVYSFGIILLRLLTGRP 700
D++S G I+ ++ +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKI 216
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 86.6 bits (213), Expect = 1e-18
Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 48/211 (22%)
Query: 535 KIGEGGYGSIYKG--LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 592
K+G G + +++ ++ + VA+K++ + + EI +L ++ +
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 593 ---------------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL 637
P +V + G L K + +I+ +L L
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138
Query: 638 IFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDF------------------------- 671
++ + I+H D+KP N+L++ L
Sbjct: 139 DYM--HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196
Query: 672 --EFLASGELTPKSDVYSFGIILLRLLTGRP 700
E L +D++S ++ L+TG
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITGDF 227
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 73.7 bits (180), Expect = 1e-15
Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 19/148 (12%)
Query: 535 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL----------QGPSEFQQEIDILSKIRHP 583
+GEG +++ + +K G F ++
Sbjct: 7 LMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 66
Query: 584 NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC 643
L L G Y + N L + L + + + + + +
Sbjct: 67 ALQKLQGLAVPKV---YAWEGNAVLME-LIDAKELYRVRVENPDEVLDMILEEVAKFYH- 121
Query: 644 KPHSIVHGDLKPANILLDANFVSKLSDF 671
IVHGDL N+L+ + + DF
Sbjct: 122 --RGIVHGDLSQYNVLVSEEGI-WIIDF 146
|
| >d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 80 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.6 bits (164), Expect = 1e-14
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLA 843
+ P Y I E+M++P + G TY+ + ++ L +P+T PL + L+PNLA
Sbjct: 3 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLA 62
Query: 844 LRSAIQEWLQQH 855
++ I ++ ++
Sbjct: 63 MKEVIDAFISEN 74
|
| >d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: Ubiquitin conjugation factor E4A species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 1e-11
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 767 ASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQDPHVAADGF-TYEAEALKGWLDSGHET 825
S G S + E + F PI +M DP V T + + L S +T
Sbjct: 1 GSSGSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQT 59
Query: 826 SPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855
P PL + PN L+ IQ WL +
Sbjct: 60 DPFNRSPLTMDQIRPNTELKEKIQRWLAER 89
|
| >d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: brca1 RING domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 2e-07
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 789 FTCPIFQEVMQDPHVAADGFTYEAEALKGWLDS--GHETSPMTNLPLAHKNLVPNLALRS 846
CPI E++++P + + L+ G P+ + ++L +
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQ 81
Query: 847 AIQEWLQ 853
++E L+
Sbjct: 82 LVEELLK 88
|
| >d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.1 bits (106), Expect = 2e-05
Identities = 22/141 (15%), Positives = 62/141 (43%)
Query: 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA 419
L + E +A E K+++ ++I + + + +E++ + E+
Sbjct: 158 QDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQ 217
Query: 420 NGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479
L M+++++++ME+ + + + ++ E+D+ EQ+ A++L + +
Sbjct: 218 ASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQL 277
Query: 480 EQDELQMERDKAVKEAEELRK 500
++ Q E E ++L+
Sbjct: 278 LKEGFQKESRIMKNEIQDLQT 298
|
| >d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]} Length = 166 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Apolipophorin-III superfamily: Apolipophorin-III family: Apolipophorin-III domain: Apolipophorin-III species: Manduca sexta [TaxId: 7130]
Score = 40.3 bits (94), Expect = 2e-04
Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 31/173 (17%)
Query: 352 GSVDDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRR 411
G+ + + + F E K+ + + K ++L
Sbjct: 6 GNAFEEMEKHAKEFQKT--------FSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAF 57
Query: 412 ------------KEFEEAL--ANGKLEL--ERMKKQHDEVMEEL-QIALDQKSLLESQIA 454
+ +EAL A +E E ++K H +V +E ++ +++ +
Sbjct: 58 SSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQ 117
Query: 455 ESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASS 507
ES + AKE+ + + L K+ D VK AEE++K EA++
Sbjct: 118 ESQKLAKEVASNMEETNKKLAPKIKQA------YDDFVKHAEEVQKKLHEAAT 164
|
| >d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: Pre-mRNA splicing factor Prp19 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.0 bits (85), Expect = 3e-04
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 790 TCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVP 840
C I +V + P ++ +E L+ ++ P+TN PL+ + +V
Sbjct: 2 LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVE 52
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 855 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d2gm3a1 | 171 | Putative ethylene-responsive protein AT3g01520/F4P | 99.63 | |
| d1mjha_ | 160 | "Hypothetical" protein MJ0577 {Archaeon Methanococ | 99.44 | |
| d1wgma_ | 98 | Ubiquitin conjugation factor E4A {Human (Homo sapi | 99.41 | |
| d1t1ha_ | 78 | E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsi | 99.37 | |
| d2c2la2 | 80 | STIP1 homology and U box-containing protein 1, STU | 99.32 | |
| d2z3va1 | 135 | Hypothetical protein TTHA0895 {Thermus thermophilu | 99.25 | |
| d1tq8a_ | 147 | Hypothetical protein Rv1636 {Mycobacterium tubercu | 99.17 | |
| d1jmva_ | 140 | Universal stress protein A, UspA {Haemophilus infl | 99.0 | |
| d1q77a_ | 138 | Hypothetical protein Aq_178 {Aquifex aeolicus [Tax | 98.83 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.29 | |
| d2baya1 | 56 | Pre-mRNA splicing factor Prp19 {Baker's yeast (Sac | 98.07 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.85 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.41 | |
| d1jm7b_ | 97 | bard1 RING domain {Human (Homo sapiens) [TaxId: 96 | 97.32 | |
| d1jm7a_ | 103 | brca1 RING domain {Human (Homo sapiens) [TaxId: 96 | 96.66 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.49 | |
| d1rmda2 | 86 | V(D)J recombination activating protein 1 (RAG1), d | 96.18 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.86 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.21 | |
| d1fbva4 | 79 | CBL {Human (Homo sapiens) [TaxId: 9606]} | 94.6 | |
| d1wy5a1 | 216 | TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId | 88.46 | |
| d2c5sa1 | 218 | Thiamine biosynthesis protein ThiI, C-terminal dom | 81.21 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-45 Score=391.66 Aligned_cols=234 Identities=27% Similarity=0.452 Sum_probs=191.9
Q ss_pred hcccCCccccceeeccCceEEEEEEECCeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEE
Q 003033 524 EGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY 600 (855)
Q Consensus 524 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~ 600 (855)
+...++|...++||+|+||.||+|.+++ .||||+++.... ...+.|.+|+.+|.+++|||||+++|++. +..+|||
T Consensus 4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~ 82 (276)
T d1uwha_ 4 EIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVT 82 (276)
T ss_dssp BCCTTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEE
T ss_pred ccccccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEE
Confidence 3445689999999999999999998765 599999976533 23567999999999999999999999985 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
|||++|+|.++|... ...++|..++.|+.||+.||.|||+ ++||||||||+||||+.++++||+|||+.
T Consensus 83 Ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 83 QWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp ECCCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred ecCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence 999999999999533 3469999999999999999999999 79999999999999999999999999742
Q ss_pred ---------------------c---cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH---HHHhhcccccccCCCCCC
Q 003033 675 ---------------------A---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ---YALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 675 ---------------------~---~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~---~~~~~~~~~~~~d~~~~~ 727 (855)
. .+.|+.++|||||||+||||+||++||....... ..+..+.. .+....
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~----~p~~~~ 233 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL----SPDLSK 233 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSC----CCCGGG
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC----CCcchh
Confidence 1 1347889999999999999999999997544322 22233222 222222
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.+...+..+.+|+.+||+.||.+|||+ ++|++.|+.+...
T Consensus 234 ~~~~~~~~l~~li~~cl~~dp~~RPt~-~~il~~Le~l~~~ 273 (276)
T d1uwha_ 234 VRSNCPKAMKRLMAECLKKKRDERPLF-PQILASIELLARS 273 (276)
T ss_dssp SCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHT
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHHHc
Confidence 344456789999999999999999999 8999999988653
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-44 Score=380.95 Aligned_cols=226 Identities=25% Similarity=0.474 Sum_probs=189.3
Q ss_pred cCCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
..+|+..+.||+|+||.||+|.+. +..||||+++... ...++|.+|+.+|++++|||||+++|+| .+..+||||||
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~ 82 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence 357888999999999999999986 4779999997643 4567899999999999999999999999 45789999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc----------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---------- 673 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~---------- 673 (855)
++|+|.+++.. ....++|..++.|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 83 ~~g~L~~~l~~--~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 157 (263)
T d1sm2a_ 83 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157 (263)
T ss_dssp TTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred CCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCce
Confidence 99999999853 34568999999999999999999999 7999999999999999999999999973
Q ss_pred ----------------cccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHH
Q 003033 674 ----------------LASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 ----------------~~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+....++.++|||||||++|||+| |.+||........ .+..+ .....|...+.
T Consensus 158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~--------~~~~~p~~~~~ 229 (263)
T d1sm2a_ 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--------FRLYKPRLAST 229 (263)
T ss_dssp -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT--------CCCCCCTTSCH
T ss_pred eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc--------CCCCCccccCH
Confidence 233568889999999999999999 5777765443322 22221 12233455568
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
++.+|+.+||+.||.+||++ ++|++.|+.+..
T Consensus 230 ~l~~li~~cl~~~p~~Rps~-~~il~~L~~i~e 261 (263)
T d1sm2a_ 230 HVYQIMNHCWKERPEDRPAF-SRLLRQLAEIAE 261 (263)
T ss_dssp HHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCH-HHHHHHHHHHHh
Confidence 89999999999999999999 899999998854
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-44 Score=384.22 Aligned_cols=230 Identities=27% Similarity=0.414 Sum_probs=187.8
Q ss_pred cccCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEe
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEY 602 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey 602 (855)
...++|...++||+|+||.||+|.+++ ..||||+++... ...+.|.+|+.+|++++|||||+++|+|. +..+|||||
T Consensus 10 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey 88 (272)
T d1qpca_ 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY 88 (272)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred cCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEe
Confidence 344678889999999999999999974 789999997643 45678999999999999999999999984 467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
|++|+|.+++.... ...++|..++.|+.||+.||.|||+ ++|+||||||+||||+.++.+||+|||+.
T Consensus 89 ~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~ 164 (272)
T d1qpca_ 89 MENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (272)
T ss_dssp CTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCcc
Confidence 99999999875332 2359999999999999999999999 79999999999999999999999999843
Q ss_pred ------------------ccCCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 675 ------------------ASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 ------------------~~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
..+.++.++|||||||+||||+|| .|||............ ........|...+.+
T Consensus 165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i------~~~~~~~~p~~~~~~ 238 (272)
T d1qpca_ 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL------ERGYRMVRPDNCPEE 238 (272)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH------HTTCCCCCCTTCCHH
T ss_pred ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH------HhcCCCCCcccChHH
Confidence 124467889999999999999995 5666554433221111 111122234455678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+.+|+.+||+.||.+|||+ ++|++.|+++-
T Consensus 239 l~~li~~cl~~~P~~Rpt~-~ei~~~L~~~f 268 (272)
T d1qpca_ 239 LYQLMRLCWKERPEDRPTF-DYLRSVLEDFF 268 (272)
T ss_dssp HHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCH-HHHHHHhhhhh
Confidence 9999999999999999999 89999998763
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-44 Score=388.84 Aligned_cols=225 Identities=26% Similarity=0.435 Sum_probs=184.8
Q ss_pred CCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.+|...++||+|+||.||+|.++. ..||||.+...... ..+.|.+|+.+|++++|||||+++|+|. +..+||
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv 105 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII 105 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 356677899999999999998852 35899998764332 3457999999999999999999999994 578999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
||||++|+|.+++.. ....++|..++.|+.||+.||.|||+ ++||||||||+||||+.++++||+|||+.
T Consensus 106 ~Ey~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 106 TEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp EECCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEecCCCcceeeecc--ccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccC
Confidence 999999999998853 34569999999999999999999999 79999999999999999999999999842
Q ss_pred -------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHhhcccccccCCCCC
Q 003033 675 -------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAG 726 (855)
Q Consensus 675 -------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~--~~~~~~~~~~~d~~~~ 726 (855)
..+.++.++|||||||+||||+| |++||........ .+..+ ...
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~--------~~~ 252 (299)
T d1jpaa_ 181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD--------YRL 252 (299)
T ss_dssp ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--------CCC
T ss_pred CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--------CCC
Confidence 23457889999999999999998 8999976554322 12221 112
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
+.|...+..+.+|+.+||+.||.+||++ .+|++.|+.+.
T Consensus 253 ~~~~~~~~~l~~li~~cl~~~P~~RPs~-~ei~~~L~~~l 291 (299)
T d1jpaa_ 253 PPPMDCPSALHQLMLDCWQKDRNHRPKF-GQIVNTLDKMI 291 (299)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHh
Confidence 2344566889999999999999999999 88999998863
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.8e-44 Score=385.92 Aligned_cols=230 Identities=27% Similarity=0.471 Sum_probs=190.3
Q ss_pred hhhcccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
+++...++|...++||+|+||.||+|.+. ++.||||+++... ...++|.+|+.+|++++|||||+++|+|. +..+
T Consensus 11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (287)
T d1opja_ 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 89 (287)
T ss_dssp TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence 34445567899999999999999999986 6789999997653 35678999999999999999999999994 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
||||||++|+|.++|... ....++|..+..|+.||+.||.|||+ ++||||||||+||||+.++++||+|||+.
T Consensus 90 iv~E~~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~ 165 (287)
T d1opja_ 90 IITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM 165 (287)
T ss_dssp EEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred EEeecccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeec
Confidence 999999999999998643 34579999999999999999999999 79999999999999999999999999742
Q ss_pred -----------------------ccCCCCcchhHHHHHHHHHHHHhCCCC-CCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 675 -----------------------ASGELTPKSDVYSFGIILLRLLTGRPA-LGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 -----------------------~~~~~t~ksDVwSfGvvl~elltG~~p-f~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
..+.|+.++|||||||++|||+||..| |...+... ..+..+ .....
T Consensus 166 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~--------~~~~~ 237 (287)
T d1opja_ 166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD--------YRMER 237 (287)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT--------CCCCC
T ss_pred CCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC--------CCCCC
Confidence 245688899999999999999996554 54433322 122221 12234
Q ss_pred ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 729 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 729 p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
|...+..+.+|+.+||+.||.+|||+ ++|++.|+.+
T Consensus 238 ~~~~~~~l~~li~~cl~~dP~~Rps~-~ei~~~L~~~ 273 (287)
T d1opja_ 238 PEGCPEKVYELMRACWQWNPSDRPSF-AEIHQAFETM 273 (287)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHT
T ss_pred CccchHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHH
Confidence 44556889999999999999999999 8898888876
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=382.08 Aligned_cols=225 Identities=25% Similarity=0.421 Sum_probs=185.2
Q ss_pred CCccccc-eeeccCceEEEEEEEC----CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec-CceEEEE
Q 003033 528 HNFDPSL-KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~-~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~ 600 (855)
++|.... +||+|+||.||+|.++ +..||||+++..... ..+.|.+|+.+|++++|||||+++|+|. +.++|||
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvm 87 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 87 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEE
Confidence 4555555 4999999999999875 347999999765322 2467999999999999999999999994 5788999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----- 675 (855)
|||++|+|.+++.. ....+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 88 E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~ 162 (285)
T d1u59a_ 88 EMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 162 (285)
T ss_dssp ECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EeCCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence 99999999999843 33569999999999999999999999 799999999999999999999999998431
Q ss_pred -----------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCC
Q 003033 676 -----------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -----------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p 729 (855)
.+.++.++|||||||++|||+| |++||......+ ..+..+. ....|
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~--------~~~~p 234 (285)
T d1u59a_ 163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK--------RMECP 234 (285)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC--------CCCCC
T ss_pred ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCCC
Confidence 2346779999999999999998 999997554332 2222222 22344
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+.++.+|+.+||+.||.+||++ .+|.+.|+.+.
T Consensus 235 ~~~~~~l~~li~~cl~~~p~~RPs~-~~i~~~L~~~~ 270 (285)
T d1u59a_ 235 PECPPELYALMSDCWIYKWEDRPDF-LTVEQRMRACY 270 (285)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHH
Confidence 5566889999999999999999999 78988888764
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-43 Score=376.83 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=183.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
++|+..++||+|+||.||+|... +..||||+++.......+.+.+|+.+|++++|||||+++++| .+..|||||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 46899999999999999999876 688999999876666677899999999999999999999998 45789999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++|+|.+++.. ..+++..+..|+.||+.||.|||+ ++||||||||+|||++.++++||+|||++
T Consensus 100 ~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 172 (293)
T d1yhwa1 100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (293)
T ss_dssp TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeecccccc
Confidence 99999998753 358999999999999999999999 89999999999999999999999999742
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
..+.|+.++|||||||++|+|+||++||............... . ......|...+..+.+
T Consensus 173 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~-~---~~~~~~~~~~s~~~~~ 248 (293)
T d1yhwa1 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-G---TPELQNPEKLSAIFRD 248 (293)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH-C---SCCCSSGGGSCHHHHH
T ss_pred ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC-C---CCCCCCcccCCHHHHH
Confidence 2355788999999999999999999999766544332221100 0 0111234455688999
Q ss_pred HHHHhhccCCCCCCChHHHH
Q 003033 739 LAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~ev 758 (855)
|+.+||+.||.+||++ +++
T Consensus 249 li~~~L~~dP~~R~s~-~ei 267 (293)
T d1yhwa1 249 FLNRCLDMDVEKRGSA-KEL 267 (293)
T ss_dssp HHHHHTCSSTTTSCCH-HHH
T ss_pred HHHHHccCChhHCcCH-HHH
Confidence 9999999999999999 665
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-43 Score=375.65 Aligned_cols=217 Identities=25% Similarity=0.434 Sum_probs=178.1
Q ss_pred ceeeccCceEEEEEEECC----eEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec-CceEEEEEecCCC
Q 003033 534 LKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 606 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV~Ey~~~G 606 (855)
++||+|+||.||+|.++. +.||||+++...... .+.|.+|+.+|++++|||||+++|+|. +.++||||||++|
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g 92 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 92 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence 469999999999998752 579999997653322 457999999999999999999999994 4688999999999
Q ss_pred CHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-----------
Q 003033 607 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA----------- 675 (855)
Q Consensus 607 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~----------- 675 (855)
+|.+++.. ...++|..++.|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 93 ~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 93 PLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred cHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence 99999853 3469999999999999999999999 799999999999999999999999998532
Q ss_pred -----------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 -----------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 -----------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+.++.++|||||||++|||+| |++||......+ ..+..+ .....|...+.+
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~--------~~~~~p~~~~~~ 238 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG--------ERMGCPAGCPRE 238 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT--------CCCCCCTTCCHH
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcC--------CCCCCCcccCHH
Confidence 2335678999999999999998 899997654432 222222 122344555688
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+.+|+.+||+.||.+||++ ++|...|+..
T Consensus 239 ~~~li~~cl~~dp~~RPs~-~~i~~~L~~~ 267 (277)
T d1xbba_ 239 MYDLMNLCWTYDVENRPGF-AAVELRLRNY 267 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCH-HHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCH-HHHHHHhhCH
Confidence 9999999999999999999 7888888764
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-43 Score=369.64 Aligned_cols=224 Identities=24% Similarity=0.432 Sum_probs=187.7
Q ss_pred CCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~~ 604 (855)
++|+..++||+|+||+||+|.+++ ..||||+++.... ..+.|.+|+.++++++|||||+++|+|. +.+++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 578899999999999999999974 6899999986543 5678999999999999999999999994 46899999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
+|+|.+++.. ....+++..+.+|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 83 ~g~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 157 (258)
T d1k2pa_ 83 NGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157 (258)
T ss_dssp TEEHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCC
T ss_pred CCcHHHhhhc--cccCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCcee
Confidence 9999999753 33468999999999999999999999 79999999999999999999999999843
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
....++.++|||||||++|||+| |+.||......+...... .......|...+..+.
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~------~~~~~~~p~~~~~~l~ 231 (258)
T d1k2pa_ 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA------QGLRLYRPHLASEKVY 231 (258)
T ss_dssp CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH------TTCCCCCCTTCCHHHH
T ss_pred ecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH------hCCCCCCcccccHHHH
Confidence 23457889999999999999998 899998665433221111 1112233445567899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHhh
Q 003033 738 NLAMRCCEMSRKSRPELGKDVWRVLEP 764 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl~~L~~ 764 (855)
+|+.+||+.||.+|||+ ++++..|..
T Consensus 232 ~li~~cl~~dP~~RPt~-~eil~~L~d 257 (258)
T d1k2pa_ 232 TIMYSCWHEKADERPTF-KILLSNILD 257 (258)
T ss_dssp HHHHHTTCSSGGGSCCH-HHHHHHHHC
T ss_pred HHHHHHccCCHhHCcCH-HHHHHHhhC
Confidence 99999999999999999 888887754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-43 Score=377.13 Aligned_cols=219 Identities=23% Similarity=0.358 Sum_probs=183.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
+.|++.+.||+|+||.||+|... +..||||+++.......+.|.+|+++|++++|||||+++++| .+..+||||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 46899999999999999999986 578999999876666678899999999999999999999998 45688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++|+|.+++... ..++++..+..|+.||+.||.|||+ ++||||||||+|||++.++.+||+|||+.
T Consensus 92 ~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~ 166 (288)
T d2jfla1 92 AGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 166 (288)
T ss_dssp TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCccc
Confidence 999999987533 3469999999999999999999999 89999999999999999999999999742
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccCCCCCCCChh
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~--~~~~~~~~~d~~~~~~p~~ 731 (855)
....|+.++|||||||+||||+||++||...+...... ..+.. .....|..
T Consensus 167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~ 240 (288)
T d2jfla1 167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP------PTLAQPSR 240 (288)
T ss_dssp HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCC------CCCSSGGG
T ss_pred ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC------CCCCcccc
Confidence 12347889999999999999999999997654433222 12111 11123345
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+.++.+|+.+||+.||.+|||+ +++
T Consensus 241 ~s~~~~~li~~~L~~dp~~R~t~-~el 266 (288)
T d2jfla1 241 WSSNFKDFLKKCLEKNVDARWTT-SQL 266 (288)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCH-HHH
T ss_pred CCHHHHHHHHHHccCChhHCcCH-HHH
Confidence 56789999999999999999999 555
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-43 Score=371.64 Aligned_cols=218 Identities=25% Similarity=0.431 Sum_probs=182.9
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..+.||+|+||.||+|..+ +..||||++... .......+.+|+.+|++++|||||++++++. +..+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 36889999999999999999986 578999998643 2334567899999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
|||++|+|.+++... ..+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+.
T Consensus 86 Ey~~~g~L~~~l~~~---~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~ 159 (263)
T d2j4za1 86 EYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 159 (263)
T ss_dssp ECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred eecCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCC
Confidence 999999999999543 469999999999999999999999 89999999999999999999999999742
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+..++.++|||||||+||+|+||++||...+.......... ....+|...+.++.
T Consensus 160 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~-------~~~~~p~~~s~~~~ 232 (263)
T d2j4za1 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-------VEFTFPDFVTEGAR 232 (263)
T ss_dssp CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-------TCCCCCTTSCHHHH
T ss_pred cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc-------CCCCCCccCCHHHH
Confidence 345688999999999999999999999986654332211111 11234555668899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||+.||.+|||+ ++++
T Consensus 233 ~li~~~L~~dp~~R~t~-~eil 253 (263)
T d2j4za1 233 DLISRLLKHNPSQRPML-REVL 253 (263)
T ss_dssp HHHHHHTCSSGGGSCCH-HHHH
T ss_pred HHHHHHccCCHhHCcCH-HHHH
Confidence 99999999999999999 6664
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-43 Score=373.64 Aligned_cols=226 Identities=27% Similarity=0.463 Sum_probs=189.3
Q ss_pred cCCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec---CceEEEEEec
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEYL 603 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV~Ey~ 603 (855)
.++|+..+.||+|+||.||+|.++++.||||+++.. ...+.|.+|+++|++++|||||+++|+|. +.++|||||+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~ 83 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 83 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred HHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence 346788899999999999999999999999999753 34578999999999999999999999983 3478999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc----------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF---------- 673 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~---------- 673 (855)
++|+|.++|... ....++|..++.|+.||+.||.|||+ ++||||||||+|||++.++++||+|||+
T Consensus 84 ~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~ 159 (262)
T d1byga_ 84 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 159 (262)
T ss_dssp TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCCCcc
Confidence 999999999543 22358999999999999999999999 7999999999999999999999999973
Q ss_pred ------------cccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 674 ------------LASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 674 ------------~~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
+.++.+++++|||||||++|||+| |++||......+ ..+..+ ...+.|...+..+.+
T Consensus 160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~~ 231 (262)
T d1byga_ 160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--------YKMDAPDGCPPAVYE 231 (262)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT--------CCCCCCTTCCHHHHH
T ss_pred ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC--------CCCCCCccCCHHHHH
Confidence 334678999999999999999998 788887544322 222221 222345555678999
Q ss_pred HHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 739 LAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 739 L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
|+.+||+.||.+||++ .++++.|+.++.
T Consensus 232 li~~cl~~dP~~Rps~-~~l~~~L~~i~~ 259 (262)
T d1byga_ 232 VMKNCWHLDAAMRPSF-LQLREQLEHIKT 259 (262)
T ss_dssp HHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred HHHHHcccCHhHCcCH-HHHHHHHHHHHh
Confidence 9999999999999999 899999998864
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-42 Score=376.21 Aligned_cols=232 Identities=27% Similarity=0.476 Sum_probs=191.6
Q ss_pred hhhcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec
Q 003033 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP 593 (855)
Q Consensus 522 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~ 593 (855)
+++-..++|+..+.||+|+||.||+|++++ +.||||+++...... .+.|.+|+.+|++++||||++++++|.
T Consensus 7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~ 86 (301)
T d1lufa_ 7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 86 (301)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence 344456789999999999999999998753 679999997654322 457999999999999999999999994
Q ss_pred --CceEEEEEecCCCCHHHHhcccC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 003033 594 --EVWTLVYEYLPNGSLEDRLSCKD---------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 650 (855)
Q Consensus 594 --~~~~LV~Ey~~~GsL~~~L~~~~---------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvH 650 (855)
+..++||||+++|+|.++|.... ....++|..++.|+.||+.||.|||+ ++|||
T Consensus 87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivH 163 (301)
T d1lufa_ 87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVH 163 (301)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEe
Confidence 46899999999999999985322 12358999999999999999999999 89999
Q ss_pred cccccCceeeCCCCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHhCC-CCC
Q 003033 651 GDLKPANILLDANFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLTGR-PAL 702 (855)
Q Consensus 651 rDLKp~NILld~~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~elltG~-~pf 702 (855)
|||||+|||||.++++||+|||+. ....|+.++|||||||++|||++|. +||
T Consensus 164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~ 243 (301)
T d1lufa_ 164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243 (301)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence 999999999999999999999842 2345788999999999999999985 788
Q ss_pred CCchHHHH--HHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 703 GITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 703 ~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
......+. .+..+. ....|...+.++.+|+.+||+.||.+|||+ .+|++.|+.+
T Consensus 244 ~~~~~~e~~~~v~~~~--------~~~~p~~~~~~~~~li~~cl~~~P~~RPt~-~ev~~~L~~i 299 (301)
T d1lufa_ 244 YGMAHEEVIYYVRDGN--------ILACPENCPLELYNLMRLCWSKLPADRPSF-CSIHRILQRM 299 (301)
T ss_dssp TTSCHHHHHHHHHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHT
T ss_pred CCCCHHHHHHHHHcCC--------CCCCCccchHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHh
Confidence 76654432 222222 223455566789999999999999999999 8899999876
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-42 Score=379.82 Aligned_cols=226 Identities=27% Similarity=0.448 Sum_probs=183.8
Q ss_pred ccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEeceec--C
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 594 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~ 594 (855)
..++|+..++||+|+||.||+|.+.+ ..||||.+.... ......|.+|+.+|.++ +|||||+++|+|. +
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 34678999999999999999998753 369999987543 33456799999999998 8999999999994 4
Q ss_pred ceEEEEEecCCCCHHHHhcccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDN--------------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 654 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~--------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLK 654 (855)
..+||||||++|+|.++|..... ...++|..++.|+.||+.||.|||+ ++|||||||
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlK 191 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 191 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCc
Confidence 68999999999999999964321 2468999999999999999999999 799999999
Q ss_pred cCceeeCCCCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCch
Q 003033 655 PANILLDANFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITK 706 (855)
Q Consensus 655 p~NILld~~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~ 706 (855)
|+|||++.++++||+|||++ ..+.++.++|||||||+||||+| |++||....
T Consensus 192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999842 23567889999999999999998 899997543
Q ss_pred HH---HHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHh
Q 003033 707 EV---QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 763 (855)
Q Consensus 707 ~~---~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~ 763 (855)
.. ...+..+ ...+.|...+.++.+|+.+||+.||.+|||+ ++|++.|.
T Consensus 272 ~~~~~~~~~~~~--------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~-~ei~~~L~ 322 (325)
T d1rjba_ 272 VDANFYKLIQNG--------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSF-PNLTSFLG 322 (325)
T ss_dssp CSHHHHHHHHTT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHH
T ss_pred HHHHHHHHHhcC--------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHh
Confidence 22 2222221 1223455567889999999999999999999 88988875
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-43 Score=372.11 Aligned_cols=220 Identities=25% Similarity=0.354 Sum_probs=174.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC-CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
++|+..+.||+|+||.||+|..+ +..||||+++.... ...+.|.+|+.+|++++|||||++++++. +..||||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 47899999999999999999986 67899999976533 23567999999999999999999999984 468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc-------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------- 675 (855)
|++|+|.++|.. ...+++..+..|+.||+.||.|||+ ++||||||||+|||++.++.+||+|||++.
T Consensus 85 ~~gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~ 158 (271)
T d1nvra_ 85 CSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158 (271)
T ss_dssp CTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCc
Confidence 999999999853 3469999999999999999999999 899999999999999999999999998431
Q ss_pred --------------------cCCC-CcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 676 --------------------SGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 676 --------------------~~~~-t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
...+ +.++|||||||+||||+||++||................ ...... +...+.
T Consensus 159 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~---~~~~~~-~~~~s~ 234 (271)
T d1nvra_ 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KTYLNP-WKKIDS 234 (271)
T ss_dssp ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTT---CTTSTT-GGGSCH
T ss_pred cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcC---CCCCCc-cccCCH
Confidence 2233 467999999999999999999996543221111110000 001111 123457
Q ss_pred HHHHHHHHhhccCCCCCCChHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
++.+|+.+||+.||.+|||+ +++
T Consensus 235 ~~~~li~~~L~~dP~~R~t~-~ei 257 (271)
T d1nvra_ 235 APLALLHKILVENPSARITI-PDI 257 (271)
T ss_dssp HHHHHHHHHSCSSTTTSCCH-HHH
T ss_pred HHHHHHHHHcCCChhHCcCH-HHH
Confidence 88999999999999999998 555
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-43 Score=373.52 Aligned_cols=223 Identities=25% Similarity=0.406 Sum_probs=176.6
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceec----CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~----~~~~LV 599 (855)
++|+..+.||+|+||.||+|..+ +..||||++....... .+.|.+|+.+|++++|||||++++++. ..+|||
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 47999999999999999999886 6789999998764332 356889999999999999999999883 347899
Q ss_pred EEecCCCCHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCceecccccCceeeCCCCcEEEeeccc---
Q 003033 600 YEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFEF--- 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~IvHrDLKp~NILld~~~~~KL~DFg~--- 673 (855)
||||++|+|.+++... .....+++..+..|+.||+.||.|||+.. .++||||||||+||||+.++.+||+|||+
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999998532 22457999999999999999999999832 13599999999999999999999999963
Q ss_pred ----------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHH--HHhhcccccccCCCCCCCC
Q 003033 674 ----------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ----------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p 729 (855)
+....|+.++|||||||++|||+||++||...+.... .+..+.+ ...|
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~--------~~~~ 235 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF--------RRIP 235 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC--------CCCC
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--------CCCC
Confidence 2345688999999999999999999999986654432 2222221 1234
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.++.+|+.+||+.||.+||++ ++++
T Consensus 236 ~~~s~~l~~li~~~L~~dp~~Rps~-~ell 264 (269)
T d2java1 236 YRYSDELNEIITRMLNLKDYHRPSV-EEIL 264 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred cccCHHHHHHHHHHcCCChhHCcCH-HHHH
Confidence 4456789999999999999999999 6664
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-42 Score=371.65 Aligned_cols=227 Identities=26% Similarity=0.447 Sum_probs=185.4
Q ss_pred cCCccccceeeccCceEEEEEEECC------eEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
...|+..++||+|+||.||+|.++. ..||||+++..... ....|.+|+.+|++++|||||+++|+|. +..+
T Consensus 6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~ 85 (283)
T d1mqba_ 6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 85 (283)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence 3468888999999999999998763 36999999764332 2346899999999999999999999994 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
+|||||.+|+|.+++.. ....++|..++.|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+.
T Consensus 86 ~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 86 IITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEEecccCcchhhhhc--ccccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcc
Confidence 99999999999998753 33569999999999999999999999 79999999999999999999999999742
Q ss_pred -------------------------ccCCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHH--HHHhhcccccccCCCCC
Q 003033 675 -------------------------ASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQ--YALDTGKLKNLLDPLAG 726 (855)
Q Consensus 675 -------------------------~~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~--~~~~~~~~~~~~d~~~~ 726 (855)
..+.++.++|||||||+||||+|| .+|+....... ..+.. ....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~--------~~~~ 232 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND--------GFRL 232 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT--------TCCC
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhc--------cCCC
Confidence 234578899999999999999995 55554433322 12222 2223
Q ss_pred CCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 727 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 727 ~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
..|...+..+.+|+.+||+.||.+||++ .+|++.|+.+..
T Consensus 233 ~~~~~~~~~l~~li~~cl~~~p~~RPt~-~eil~~L~~l~~ 272 (283)
T d1mqba_ 233 PTPMDCPSAIYQLMMQCWQQERARRPKF-ADIVSILDKLIR 272 (283)
T ss_dssp CCCTTCBHHHHHHHHHHTCSSTTTSCCH-HHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHCcCCHhHCcCH-HHHHHHHHHHhh
Confidence 3455566889999999999999999999 889999998744
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-42 Score=370.43 Aligned_cols=225 Identities=31% Similarity=0.487 Sum_probs=186.6
Q ss_pred cCCccccceeeccCceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceecC-ceEEEEEecC
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYEYLP 604 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~LV~Ey~~ 604 (855)
.++|...+.||+|+||.||+|.+++ ..||||+++... ...+.|.+|+.+|++++|||||+++|+|.+ ..++|||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~ 94 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 94 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecC
Confidence 4578899999999999999999975 679999997543 456789999999999999999999999954 5889999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc----------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL---------- 674 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~---------- 674 (855)
+|+|..++.... ...++|..++.|+.||+.||.|||. ++|+||||||+|||||.++++||+|||+.
T Consensus 95 ~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 170 (285)
T d1fmka3 95 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 170 (285)
T ss_dssp TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCcee
Confidence 999999885432 2459999999999999999999999 79999999999999999999999999843
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHHH--HHhhcccccccCCCCCCCChhhHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQY--ALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
..+.++.++|||||||+||||+|| ++|+........ .+..+ ...+.|...+++
T Consensus 171 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~--------~~~~~~~~~~~~ 242 (285)
T d1fmka3 171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--------YRMPCPPECPES 242 (285)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT--------CCCCCCTTSCHH
T ss_pred eccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc--------CCCCCCcccCHH
Confidence 235678899999999999999995 555554433221 11111 112334455678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
+.+|+.+||+.||++||++ ++|+..|+..
T Consensus 243 l~~li~~cl~~dP~~Rps~-~~i~~~L~~~ 271 (285)
T d1fmka3 243 LHDLMCQCWRKEPEERPTF-EYLQAFLEDY 271 (285)
T ss_dssp HHHHHHHHTCSSGGGSCCH-HHHHHHHHTT
T ss_pred HHHHHHHHcccCHhHCcCH-HHHHHHHhhh
Confidence 9999999999999999999 8898988865
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-42 Score=369.00 Aligned_cols=226 Identities=25% Similarity=0.384 Sum_probs=184.8
Q ss_pred cCCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
.++|+..+.||+|+||.||+|.+.. ..||||.++...... ...|.+|+.+|++++|||||+++|+|. +..+||
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv 85 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 85 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEE
Confidence 4578999999999999999998753 468999987543322 456999999999999999999999995 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+ ++||||||||+|||++.++.+||+|||+.
T Consensus 86 ~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~ 160 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160 (273)
T ss_dssp EECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccC
Confidence 999999999998753 33568999999999999999999999 89999999999999999999999999742
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHhhcccccccCCCCCCCCh
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPF 730 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~p~ 730 (855)
..+.++.++|||||||++|||+| |.+||....... ..+..+. ..+.|.
T Consensus 161 ~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~--------~~~~~~ 232 (273)
T d1mp8a_ 161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE--------RLPMPP 232 (273)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--------CCCCCT
T ss_pred CcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCCC
Confidence 23567889999999999999998 899997554322 2222221 123344
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
..+..+.+|+.+||+.||.+|||+ ++|++.|+.+.
T Consensus 233 ~~~~~~~~li~~cl~~dp~~Rps~-~ei~~~L~~i~ 267 (273)
T d1mp8a_ 233 NCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLSTIL 267 (273)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHH
Confidence 556889999999999999999999 88999888763
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-42 Score=376.94 Aligned_cols=229 Identities=22% Similarity=0.364 Sum_probs=180.5
Q ss_pred ccCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
..++|+..++||+|+||.||+|... +..||||+++...... ...+.+|+.+|++++|||||+++++|. +..||||
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4568999999999999999999986 6889999998653322 467899999999999999999999994 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------- 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------- 673 (855)
|||++|+|.+++... ..+++..+..++.||+.||.|||+. ++||||||||+||||+.+|++||+|||+
T Consensus 84 Ey~~gg~L~~~l~~~---~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 158 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158 (322)
T ss_dssp ECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence 999999999999643 3589999999999999999999972 3899999999999999999999999973
Q ss_pred ----------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh-h----ccccc-------------
Q 003033 674 ----------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-T----GKLKN------------- 719 (855)
Q Consensus 674 ----------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~-~----~~~~~------------- 719 (855)
+.+..|+.++|||||||++|||+||++||...+....... . +....
T Consensus 159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (322)
T d1s9ja_ 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238 (322)
T ss_dssp TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence 2345789999999999999999999999964432111000 0 00000
Q ss_pred ------------------ccCCCCCCCC-hhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 720 ------------------LLDPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 720 ------------------~~d~~~~~~p-~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
.........| ...+.++.+|+.+||..||.+|||+ +++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta-~e~L~ 297 (322)
T d1s9ja_ 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL-KQLMV 297 (322)
T ss_dssp -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCH-HHHHT
T ss_pred ccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCH-HHHhh
Confidence 0000000011 1235679999999999999999999 66654
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-41 Score=371.31 Aligned_cols=225 Identities=24% Similarity=0.423 Sum_probs=186.7
Q ss_pred CCccccceeeccCceEEEEEEECC------eEEEEEEecCC-CCCChhhHHHHHHHHHhcCCCcceeEeceec-CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~-~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-~~~~LV 599 (855)
.+|+.+++||+|+||.||+|.+.. .+||||.++.. .....+.|.+|+.+|++++|||||+++|+|. +..+++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v 88 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 88 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence 469999999999999999998753 36999998754 3345678999999999999999999999995 467899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL----- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~----- 674 (855)
|||+.+|+|.+++.. ....+++..++.|+.||+.||.|||+ ++||||||||+||||+.++++||+|||+.
T Consensus 89 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 163 (317)
T d1xkka_ 89 TQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163 (317)
T ss_dssp EECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred EEeccCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence 999999999998854 34579999999999999999999999 79999999999999999999999999732
Q ss_pred ----------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHhhcccccccCCCCCCCC
Q 003033 675 ----------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 675 ----------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--~~~~~~~~~~~~~~d~~~~~~p 729 (855)
..+.|+.++|||||||+||||+| |.+||..... +...+..+. ....|
T Consensus 164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~--------~~~~p 235 (317)
T d1xkka_ 164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--------RLPQP 235 (317)
T ss_dssp TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC--------CCCCC
T ss_pred ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC--------CCCCC
Confidence 23557889999999999999999 8999976432 222332221 12344
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+..+.+|+.+||..||.+||++ .+|+..|+.+.
T Consensus 236 ~~~~~~~~~li~~cl~~dP~~RPs~-~eil~~l~~~~ 271 (317)
T d1xkka_ 236 PICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMA 271 (317)
T ss_dssp TTBCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhCCCChhhCcCH-HHHHHHHHHHH
Confidence 5566889999999999999999999 78888888774
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-41 Score=370.34 Aligned_cols=219 Identities=26% Similarity=0.323 Sum_probs=178.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~E 601 (855)
.|+.++.||+|+||.||+|... +..||||+++...... .+.|.+|+.+|++++|||||+++|+| .+..|||||
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 4888999999999999999876 5789999998654433 34688999999999999999999998 446899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA------ 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~------ 675 (855)
||++|+|..++.. ..++++..+..|+.||+.||.|||+ ++||||||||+||||+.++++||+|||++.
T Consensus 96 ~~~~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~ 169 (309)
T d1u5ra_ 96 YCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169 (309)
T ss_dssp CCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred ecCCCchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCCCC
Confidence 9999999776643 2469999999999999999999999 899999999999999999999999997421
Q ss_pred ------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHH
Q 003033 676 ------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 737 (855)
Q Consensus 676 ------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~ 737 (855)
.+.|+.++|||||||++|||++|++||.............. ..... ..+...+..+.
T Consensus 170 ~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~--~~~~~---~~~~~~s~~~~ 244 (309)
T d1u5ra_ 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPA---LQSGHWSEYFR 244 (309)
T ss_dssp CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCCC---CSCTTSCHHHH
T ss_pred ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh--CCCCC---CCCCCCCHHHH
Confidence 24578899999999999999999999976654433222111 00011 11223457899
Q ss_pred HHHHHhhccCCCCCCChHHHHH
Q 003033 738 NLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 738 ~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+|+.+||+.||.+|||+ ++++
T Consensus 245 ~li~~~L~~dP~~Rpt~-~ell 265 (309)
T d1u5ra_ 245 NFVDSCLQKIPQDRPTS-EVLL 265 (309)
T ss_dssp HHHHHHTCSSGGGSCCH-HHHT
T ss_pred HHHHHHCcCChhHCcCH-HHHH
Confidence 99999999999999999 6664
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-41 Score=368.60 Aligned_cols=221 Identities=23% Similarity=0.326 Sum_probs=176.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
.+.|+..+.||+|+||.||+|..+ +..||||++...... ....|.+|+.+|++++|||||++++++. +..|||||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 356999999999999999999986 678999999765432 3456889999999999999999999984 46889999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC---CCCcEEEeeccc-----
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFEF----- 673 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~~KL~DFg~----- 673 (855)
||+||+|.++|.. ...+++..+..|+.||+.||.|||+ ++||||||||+|||+. .++.+||+|||+
T Consensus 88 ~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~ 161 (307)
T d1a06a_ 88 LVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 161 (307)
T ss_dssp CCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred ccCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence 9999999999953 3469999999999999999999999 8999999999999994 578999999973
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--HhhcccccccCCCCCCCChhh
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPFVQ 732 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~ 732 (855)
+.+..|+.++|||||||+||+|+||++||......... +..+.. . .....+...
T Consensus 162 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~----~-~~~~~~~~~ 236 (307)
T d1a06a_ 162 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY----E-FDSPYWDDI 236 (307)
T ss_dssp -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC----C-CCTTTTTTS
T ss_pred CCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC----C-CCCccccCC
Confidence 23456899999999999999999999999766543322 122111 1 111222345
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 733 AEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 733 ~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.++.+|+.+||+.||.+|||+ ++++
T Consensus 237 s~~~~~li~~~L~~dP~~R~s~-~eil 262 (307)
T d1a06a_ 237 SDSAKDFIRHLMEKDPEKRFTC-EQAL 262 (307)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCH-HHHh
Confidence 6789999999999999999999 6664
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2e-41 Score=374.83 Aligned_cols=221 Identities=21% Similarity=0.331 Sum_probs=182.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey~ 603 (855)
++|++.+.||+|+||.||+|... +..||||+++.........+.+|+.+|++|+|||||+++++|. +.+|||||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 108 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 108 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 46999999999999999999986 6889999998654444567889999999999999999999984 4688999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC--CCCcEEEeecccc-------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANFVSKLSDFEFL------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld--~~~~~KL~DFg~~------- 674 (855)
++|+|.+++.. ...+|++..+..|+.||+.||.|||+ ++||||||||+||||+ .++.+||+|||++
T Consensus 109 ~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~ 183 (352)
T d1koba_ 109 SGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 183 (352)
T ss_dssp CCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCCC
Confidence 99999998743 33469999999999999999999999 8999999999999997 5789999999842
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHH--hhcccccccCCCCCCCChhhHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~--~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+..|+.++|||||||+||+|+||++||.......... ..+... .....+...+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~s~~ 258 (352)
T d1koba_ 184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE-----FDEDAFSSVSPE 258 (352)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC-----CCSSTTTTSCHH
T ss_pred ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----CCcccccCCCHH
Confidence 34558899999999999999999999998765543322 222111 111122345678
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|+.+||+.||.+|||+ ++++
T Consensus 259 ~~~li~~~L~~dp~~R~s~-~eil 281 (352)
T d1koba_ 259 AKDFIKNLLQKEPRKRLTV-HDAL 281 (352)
T ss_dssp HHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred HHHHHHHHccCChhHCcCH-HHHh
Confidence 9999999999999999999 6664
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-41 Score=362.57 Aligned_cols=218 Identities=22% Similarity=0.392 Sum_probs=173.7
Q ss_pred cccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec------CceEEEE
Q 003033 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP------EVWTLVY 600 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~~~~LV~ 600 (855)
....+||+|+||+||+|.+. +..||+|++...... ..+.|.+|+++|++++|||||+++++|. ..++|||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 45568999999999999987 568999998765322 2456899999999999999999999873 2478999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecccccCceeeC-CCCcEEEeeccccc--
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS--IVHGDLKPANILLD-ANFVSKLSDFEFLA-- 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~--IvHrDLKp~NILld-~~~~~KL~DFg~~~-- 675 (855)
|||++|+|.+++... ..+++..+..|+.||+.||.|||+ ++ ||||||||+||||+ .++.+||+|||+..
T Consensus 92 E~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~ 165 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 165 (270)
T ss_dssp ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCcHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence 999999999999543 468999999999999999999998 55 99999999999996 57999999997421
Q ss_pred --------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHH
Q 003033 676 --------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 676 --------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+.++.++|||||||+||||+||++||............ +..... ...++...+++
T Consensus 166 ~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~--i~~~~~--~~~~~~~~~~~ 241 (270)
T d1t4ha_ 166 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR--VTSGVK--PASFDKVAIPE 241 (270)
T ss_dssp CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH--HTTTCC--CGGGGGCCCHH
T ss_pred cCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHH--HHcCCC--CcccCccCCHH
Confidence 245888999999999999999999999754433222211 001011 11223334567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+.+|+.+||+.||++|||+ ++++
T Consensus 242 ~~~li~~~l~~dp~~R~s~-~ell 264 (270)
T d1t4ha_ 242 VKEIIEGCIRQNKDERYSI-KDLL 264 (270)
T ss_dssp HHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred HHHHHHHHccCCHhHCcCH-HHHh
Confidence 9999999999999999998 6664
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-42 Score=366.05 Aligned_cols=227 Identities=25% Similarity=0.383 Sum_probs=176.8
Q ss_pred CCccccceeeccCceEEEEEEECC-----eEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceecC-ceEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE-VWTL 598 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-~~~L 598 (855)
++|+..+.||+|+||.||+|.+.. ..||||+++...... .+.|.+|+.+|++++|||||+++|+|.+ ..++
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l 87 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 87 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence 568899999999999999998752 469999997653322 4579999999999999999999999954 5789
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA--- 675 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~--- 675 (855)
|||||++|+|.+++... ...+++..++.++.||+.||.|||+ ++|+||||||+||||+.++.+||+|||+..
T Consensus 88 v~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 88 VTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeeecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhcc
Confidence 99999999999988543 3469999999999999999999999 799999999999999999999999998432
Q ss_pred -------------------------cCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 676 -------------------------SGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 676 -------------------------~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
...++.++|||||||++|||+| |++||...+.......... .....+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~~~ 237 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-----EGERLPRP 237 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----SCCCCCCC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh-----CCCCCCCc
Confidence 2235668999999999999998 8999976655443221110 01112233
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
...+..+.+|+.+||..||++|||+ .+|.+.|+.+
T Consensus 238 ~~~~~~l~~li~~cl~~dp~~RPt~-~ei~~~L~~~ 272 (273)
T d1u46a_ 238 EDCPQDIYNVMVQCWAHKPEDRPTF-VALRDFLLEA 272 (273)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHH
T ss_pred ccccHHHHHHHHHHcCCChhHCcCH-HHHHHHHHhc
Confidence 3445789999999999999999999 8898888764
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.1e-41 Score=372.98 Aligned_cols=222 Identities=21% Similarity=0.333 Sum_probs=182.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEec
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 603 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey~ 603 (855)
++|++.+.||+|+||.||+|... +..||||++........+.+.+|+.+|++++|||||+++++| .+.+|||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 47999999999999999999986 689999999866544566789999999999999999999998 44789999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC--CCCcEEEeecccc-------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANFVSKLSDFEFL------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld--~~~~~KL~DFg~~------- 674 (855)
++|+|.+++.. ....+++..+..|+.||+.||.|||+ ++||||||||+||||+ .++.+||+|||+.
T Consensus 106 ~gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 180 (350)
T d1koaa2 106 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 180 (350)
T ss_dssp CSCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS
T ss_pred CCCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheeccccc
Confidence 99999999853 23469999999999999999999999 8999999999999995 4689999999842
Q ss_pred -----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccccCCCCCCCChhhHHH
Q 003033 675 -----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDPLAGDWPFVQAEQ 735 (855)
Q Consensus 675 -----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--~~~~~~~~d~~~~~~p~~~~~~ 735 (855)
.+..++.++|||||||++|+|+||++||...+....... .+... .....+...+..
T Consensus 181 ~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~s~~ 255 (350)
T d1koaa2 181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN-----MDDSAFSGISED 255 (350)
T ss_dssp CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-----SCCGGGGGCCHH
T ss_pred ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----CCcccccCCCHH
Confidence 234578899999999999999999999986654332221 11110 011111234578
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 003033 736 LANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 736 l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
+.+|+.+||..||.+|||+ +++++
T Consensus 256 ~~~li~~~L~~dP~~R~t~-~eil~ 279 (350)
T d1koaa2 256 GKDFIRKLLLADPNTRMTI-HQALE 279 (350)
T ss_dssp HHHHHHHHCCSSGGGSCCH-HHHHH
T ss_pred HHHHHHHHccCChhHCcCH-HHHhc
Confidence 9999999999999999999 66643
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-41 Score=367.67 Aligned_cols=230 Identities=26% Similarity=0.443 Sum_probs=185.8
Q ss_pred CCccccceeeccCceEEEEEEECC----eEEEEEEecCCC-CCChhhHHHHHHHHHhc-CCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~--~~~~LV 599 (855)
++|+..+.||+|+||.||+|.+++ ..||||.++... ....+.|.+|+.+|.++ +|||||+++|+|. +.+++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 467778899999999999998863 358899886543 33466899999999999 7999999999994 468999
Q ss_pred EEecCCCCHHHHhccc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcE
Q 003033 600 YEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 666 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~-------------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~ 666 (855)
|||+++|+|.++|... .....|+|..+..++.||+.||.|||+ ++||||||||+|||++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence 9999999999999543 224579999999999999999999999 799999999999999999999
Q ss_pred EEeecccc------------------------ccCCCCcchhHHHHHHHHHHHHhCC-CCCCCchHHHHHHhhccccccc
Q 003033 667 KLSDFEFL------------------------ASGELTPKSDVYSFGIILLRLLTGR-PALGITKEVQYALDTGKLKNLL 721 (855)
Q Consensus 667 KL~DFg~~------------------------~~~~~t~ksDVwSfGvvl~elltG~-~pf~~~~~~~~~~~~~~~~~~~ 721 (855)
||+|||+. ..+.++.++|||||||++|||++|. +||...+........ .
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i------~ 240 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL------P 240 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG------G
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHH------H
Confidence 99999853 2345678999999999999999965 677655443321111 1
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHh
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 767 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~ 767 (855)
.......|...+.++.+|+.+||+.||++||++ ++|++.|+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-~eil~~L~~i~~ 285 (309)
T d1fvra_ 241 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRMLE 285 (309)
T ss_dssp GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHH
T ss_pred hcCCCCCCccCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHHHh
Confidence 112233455567889999999999999999999 899999998854
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-42 Score=367.51 Aligned_cols=218 Identities=23% Similarity=0.322 Sum_probs=182.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+..+.||+|+||.||+|... +..||||++... .......|.+|+++|++++|||||+++++|. +..||||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 46999999999999999999986 678999999753 2234567999999999999999999999984 4688999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
|||++|+|.+++... ..+++..+..++.|++.||.|||+ ++||||||||+|||++.++.+||+|||++
T Consensus 88 Ey~~gg~L~~~~~~~---~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~ 161 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161 (288)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EccCCCCHHHhhhcc---CCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccC
Confidence 999999999988543 469999999999999999999999 89999999999999999999999999743
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhH
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 733 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 733 (855)
.+..|+.++|||||||+||+|+||++||...+.......... ....+|...+
T Consensus 162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~-------~~~~~p~~~s 234 (288)
T d1uu3a_ 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------LEYDFPEKFF 234 (288)
T ss_dssp --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHT-------TCCCCCTTCC
T ss_pred CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHc-------CCCCCCccCC
Confidence 234578899999999999999999999987654432211111 1123455567
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 734 EQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 734 ~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.++.+|+.+||+.||.+|||+ ++++
T Consensus 235 ~~~~~li~~~L~~dP~~R~t~-~e~~ 259 (288)
T d1uu3a_ 235 PKARDLVEKLLVLDATKRLGC-EEME 259 (288)
T ss_dssp HHHHHHHHTTSCSSGGGSTTS-GGGT
T ss_pred HHHHHHHHHHccCCHhHCcCH-HHHc
Confidence 889999999999999999998 5553
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-41 Score=362.98 Aligned_cols=222 Identities=23% Similarity=0.333 Sum_probs=180.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcCCCcceeEeceec--CceE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 597 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~ 597 (855)
+.|+..+.||+|+||.||+|..+ +..||||+++..... ..+.|.+|+.+|++++|||||+++++|. +..|
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 57999999999999999999986 678999999764322 2467999999999999999999999994 4688
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC----cEEEeeccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF----VSKLSDFEF 673 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~~KL~DFg~ 673 (855)
||||||++|+|.++|... ..+++..+..|+.||+.||.|||+ ++||||||||+|||++.++ .+||+|||+
T Consensus 90 iv~E~~~gg~L~~~i~~~---~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCccccchhccc---cccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhh
Confidence 999999999999999643 369999999999999999999999 8999999999999998776 599999974
Q ss_pred c------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 674 L------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
. ....++.++|||||||+||||+||++||................. ......+
T Consensus 164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~ 240 (293)
T d1jksa_ 164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY---EFEDEYF 240 (293)
T ss_dssp CEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC---CCCHHHH
T ss_pred hhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---CCCchhc
Confidence 2 235678899999999999999999999987655443222111100 0000111
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+..+.+|+.+||+.||.+||++ ++++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~R~s~-~eil 269 (293)
T d1jksa_ 241 SNTSALAKDFIRRLLVKDPKKRMTI-QDSL 269 (293)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCH-HHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 2345679999999999999999999 6664
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.1e-40 Score=356.48 Aligned_cols=231 Identities=23% Similarity=0.377 Sum_probs=188.0
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---hhhHHHHHHHHHhcCCCcceeEeceecC------c
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE------V 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------~ 595 (855)
.++|.+.+.||+|+||.||+|... ++.||||+++.....+ ...|.+|+.+|+.++|||||++++++.. .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 357999999999999999999976 7899999998765444 3468899999999999999999998832 3
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-- 673 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-- 673 (855)
.|||||||+||+|.+++... .++++..+..|+.||+.||.|||+ ++||||||||+|||++.++..+|+|||.
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~---~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~ 159 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR 159 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred EEEEEECCCCCEehhhhccc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhh
Confidence 78999999999999988543 469999999999999999999999 8999999999999999999999999962
Q ss_pred --------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCC
Q 003033 674 --------------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 727 (855)
Q Consensus 674 --------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~ 727 (855)
+.+..+++++|||||||++|+|+||++||............-.- ....+ ..
T Consensus 160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~-~~~~~--~~ 236 (277)
T d1o6ya_ 160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPP--SA 236 (277)
T ss_dssp ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC-CCCCG--GG
T ss_pred hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc-CCCCC--ch
Confidence 23456889999999999999999999999876654432221110 00011 01
Q ss_pred CChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 728 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 728 ~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
.+...+..+.+|+.+||+.||.+||+.+++++..|.+++
T Consensus 237 ~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp TSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred hccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 112345789999999999999999955589988888764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-41 Score=362.99 Aligned_cols=236 Identities=25% Similarity=0.338 Sum_probs=182.6
Q ss_pred chhhhhcccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEe
Q 003033 519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLV 589 (855)
Q Consensus 519 ~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~ 589 (855)
...+++...++|+..++||+|+||.||+|.+.+ +.||||+++..... ....|.+|+.++.++ +|||||.++
T Consensus 4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~ 83 (299)
T d1ywna1 4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 83 (299)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence 344444445689999999999999999998742 57999999754322 245688899888887 689999999
Q ss_pred ceec---CceEEEEEecCCCCHHHHhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceeccc
Q 003033 590 GACP---EVWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL 653 (855)
Q Consensus 590 g~~~---~~~~LV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDL 653 (855)
+++. ...++|||||++|+|.++|.... ....+++..+..|+.||+.||.|||+ ++||||||
T Consensus 84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDl 160 (299)
T d1ywna1 84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 160 (299)
T ss_dssp EEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred eeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcC
Confidence 9873 25789999999999999995432 12458999999999999999999999 89999999
Q ss_pred ccCceeeCCCCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHhC-CCCCCCc
Q 003033 654 KPANILLDANFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLTG-RPALGIT 705 (855)
Q Consensus 654 Kp~NILld~~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~elltG-~~pf~~~ 705 (855)
||+||||+.++++||+|||+. ..+.++.++|||||||++|||+|| .+||...
T Consensus 161 Kp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~ 240 (299)
T d1ywna1 161 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 240 (299)
T ss_dssp CGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999843 234578899999999999999996 5678644
Q ss_pred hH---HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 706 KE---VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 706 ~~---~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
.. ....+..+. ....|...+.++.+|+.+||+.||.+|||+ ++|++.|+.+.
T Consensus 241 ~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-~eil~~L~~il 295 (299)
T d1ywna1 241 KIDEEFCRRLKEGT--------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-SELVEHLGNLL 295 (299)
T ss_dssp CCSHHHHHHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCC--------CCCCCccCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHHH
Confidence 32 222233322 122344456789999999999999999999 89999998873
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-41 Score=361.56 Aligned_cols=233 Identities=25% Similarity=0.403 Sum_probs=185.3
Q ss_pred ccCCccccceeeccCceEEEEEEECC---------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec-
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP- 593 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~- 593 (855)
..++|.+.+.||+|+||.||+|...+ ..||||+++..... ....|.+|+..+.++ +|||||+++|+|.
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 34578889999999999999998643 46999999865432 246788999999998 8999999999994
Q ss_pred -CceEEEEEecCCCCHHHHhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCcee
Q 003033 594 -EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 659 (855)
Q Consensus 594 -~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NIL 659 (855)
+..++|||||++|+|.++|..... ...+++..++.++.||+.||.|||+ ++||||||||+|||
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiL 167 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 167 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeeccccee
Confidence 468899999999999999964321 2468999999999999999999999 89999999999999
Q ss_pred eCCCCcEEEeeccc---------------------------cccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchHHHHH
Q 003033 660 LDANFVSKLSDFEF---------------------------LASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA 711 (855)
Q Consensus 660 ld~~~~~KL~DFg~---------------------------~~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~~~~~ 711 (855)
++.++.+||+|||+ +..+.|+.++|||||||++|||+| |.+||........
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~- 246 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL- 246 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH-
Confidence 99999999999962 234678999999999999999998 7999975543321
Q ss_pred HhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 712 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 712 ~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
+.. +........|...+..+.+|+.+||+.||.+|||+ .+|++.|+.+-+.
T Consensus 247 ~~~-----i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~-~eil~~L~~i~a~ 297 (299)
T d1fgka_ 247 FKL-----LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRIVAL 297 (299)
T ss_dssp HHH-----HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred HHH-----HHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCH-HHHHHHHHHHhhc
Confidence 111 11112223455566789999999999999999999 8999999988553
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-40 Score=361.15 Aligned_cols=222 Identities=26% Similarity=0.423 Sum_probs=178.8
Q ss_pred cceeeccCceEEEEEEECC-----eEEEEEEecCCC-CCChhhHHHHHHHHHhcCCCcceeEeceec---CceEEEEEec
Q 003033 533 SLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEYL 603 (855)
Q Consensus 533 ~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---~~~~LV~Ey~ 603 (855)
.++||+|+||+||+|.+.. ..||||.++... ....+.|.+|+++|++++|||||+++|+|. ...++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 4679999999999998853 359999997532 223467999999999999999999999973 3578999999
Q ss_pred CCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---------
Q 003033 604 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--------- 674 (855)
Q Consensus 604 ~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--------- 674 (855)
++|+|.+++.. ....+++..++.++.|++.||.|||+ .+|+||||||+||||+.++.+||+|||+.
T Consensus 112 ~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~ 186 (311)
T d1r0pa_ 112 KHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 186 (311)
T ss_dssp TTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred ecCchhhhhcc--ccccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence 99999999853 34567889999999999999999999 79999999999999999999999999743
Q ss_pred --------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH---HHHhhcccccccCCCCCCCChh
Q 003033 675 --------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ---YALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 675 --------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~---~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
..+.++.++|||||||++|||+||..||....... ..+..+. ....|..
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~--------~~~~p~~ 258 (311)
T d1r0pa_ 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--------RLLQPEY 258 (311)
T ss_dssp CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTC--------CCCCCTT
T ss_pred cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC--------CCCCccc
Confidence 23457889999999999999999776664322111 1112221 1223444
Q ss_pred hHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 732 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
.+..+.+|+.+||+.||++||++ .+|++.|+.+...
T Consensus 259 ~~~~l~~li~~cl~~dP~~RPs~-~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 259 CPDPLYEVMLKCWHPKAEMRPSF-SELVSRISAIFST 294 (311)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHcCCCHhHCcCH-HHHHHHHHHHHHh
Confidence 56789999999999999999999 8999999998654
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-41 Score=363.00 Aligned_cols=233 Identities=25% Similarity=0.395 Sum_probs=189.2
Q ss_pred hhhhcccCCccccceeeccCceEEEEEEEC-------CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEecee
Q 003033 521 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC 592 (855)
Q Consensus 521 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~ 592 (855)
++++...++|...++||+|+||.||+|.++ ++.||||+++..... ....|.+|+.+|++++|||||+++|+|
T Consensus 13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~ 92 (308)
T d1p4oa_ 13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 92 (308)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence 344445578899999999999999999875 367999999754322 234689999999999999999999998
Q ss_pred c--CceEEEEEecCCCCHHHHhccc-------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCC
Q 003033 593 P--EVWTLVYEYLPNGSLEDRLSCK-------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 663 (855)
Q Consensus 593 ~--~~~~LV~Ey~~~GsL~~~L~~~-------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 663 (855)
. +..++|||||++|+|.+++... .....+++..+..|+.+++.||.|||+ ++||||||||+|||||.+
T Consensus 93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~ 169 (308)
T d1p4oa_ 93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAED 169 (308)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTT
T ss_pred ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCC
Confidence 4 5689999999999999987432 223468999999999999999999999 789999999999999999
Q ss_pred CcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHhC-CCCCCCchHHHH--HHh
Q 003033 664 FVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQY--ALD 713 (855)
Q Consensus 664 ~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~elltG-~~pf~~~~~~~~--~~~ 713 (855)
+++||+|||+. ..+.++.++|||||||+||||+|| .+||......+. .+.
T Consensus 170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~ 249 (308)
T d1p4oa_ 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 249 (308)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999843 235578899999999999999998 578866554332 222
Q ss_pred hcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhh
Q 003033 714 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 765 (855)
Q Consensus 714 ~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~ 765 (855)
.+. ..+.|...+..+.+|+.+||+.||.+||++ ++|++.|+..
T Consensus 250 ~~~--------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-~~il~~L~~~ 292 (308)
T d1p4oa_ 250 EGG--------LLDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIKEE 292 (308)
T ss_dssp TTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHGGG
T ss_pred hCC--------CCCCcccchHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHh
Confidence 221 122344456789999999999999999999 8898888865
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.1e-40 Score=354.71 Aligned_cols=219 Identities=27% Similarity=0.406 Sum_probs=180.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC---------hhhHHHHHHHHHhcC-CCcceeEeceec--
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---------PSEFQQEIDILSKIR-HPNLVTLVGACP-- 593 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---------~~~f~~Ei~iL~~l~-HpnIV~l~g~~~-- 593 (855)
++|+..+.||+|+||+||+|+.. ++.||||+++...... ...+.+|+.+|++++ |||||++++++.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 57899999999999999999885 6899999998654322 125889999999997 999999999994
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
+.+|||||||++|+|.++|... .++++..+..++.||+.||.|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~ 156 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 156 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEcCCCchHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchh
Confidence 4689999999999999999643 469999999999999999999999 7999999999999999999999999974
Q ss_pred cc------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHH--Hhhccccccc
Q 003033 674 LA------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLL 721 (855)
Q Consensus 674 ~~------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~--~~~~~~~~~~ 721 (855)
.. ...++.++|||||||+||+|+||++||......... +..+...
T Consensus 157 a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~--- 233 (277)
T d1phka_ 157 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--- 233 (277)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---
T ss_pred eeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCC---
Confidence 21 123577899999999999999999999876644322 2222211
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 722 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 722 d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
. ....+...++++.+|+.+||+.||.+||++ ++|
T Consensus 234 -~-~~~~~~~~s~~~~~li~~~L~~~p~~R~s~-~ei 267 (277)
T d1phka_ 234 -F-GSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-EEA 267 (277)
T ss_dssp -C-CTTTGGGSCHHHHHHHHHHCCSSGGGSCCH-HHH
T ss_pred -C-CCcccccCCHHHHHHHHHHccCChhHCcCH-HHH
Confidence 1 111122456789999999999999999998 665
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-40 Score=365.29 Aligned_cols=214 Identities=22% Similarity=0.271 Sum_probs=180.4
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV 599 (855)
.++|+..+.||+|+||.||+|... +..||||++++. .......+.+|+.+|++++|||||++++++. +.+|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 357999999999999999999986 688999999753 2334577899999999999999999999994 468899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc------
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------ 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------ 673 (855)
||||++|+|.+++... ..+++.....++.||+.||.|||+ ++||||||||+|||++.+|.+||+|||+
T Consensus 84 ~ey~~gg~L~~~~~~~---~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~ 157 (337)
T d1o6la_ 84 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eeccCCCchhhhhhcc---cCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence 9999999999998643 358899999999999999999999 8999999999999999999999999973
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+.+..|+.++|||||||++|||+||++||...+......... . ....+|...+.
T Consensus 158 ~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~--~-----~~~~~p~~~s~ 230 (337)
T d1o6la_ 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--M-----EEIRFPRTLSP 230 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--H-----CCCCCCTTSCH
T ss_pred CCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHh--c-----CCCCCCccCCH
Confidence 234568899999999999999999999998766533221110 0 11234556678
Q ss_pred HHHHHHHHhhccCCCCCCC
Q 003033 735 QLANLAMRCCEMSRKSRPE 753 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs 753 (855)
++.+|+.+||+.||.+||+
T Consensus 231 ~~~dli~~~L~~dP~~R~~ 249 (337)
T d1o6la_ 231 EAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTT
T ss_pred HHHHHHHhhccCCchhhcc
Confidence 8999999999999999996
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-40 Score=358.67 Aligned_cols=230 Identities=25% Similarity=0.381 Sum_probs=186.2
Q ss_pred cccCCccccceeeccCceEEEEEEECC-------eEEEEEEecCCCCC-ChhhHHHHHHHHHhc-CCCcceeEeceec--
Q 003033 525 GATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP-- 593 (855)
Q Consensus 525 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~-- 593 (855)
...++|+..++||+|+||.||+|.+.+ +.||||+++..... ....|.+|+.+++++ +|||||+++|+|.
T Consensus 20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~ 99 (311)
T d1t46a_ 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (311)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence 344678889999999999999998742 57999999865432 245689999999999 6999999999994
Q ss_pred CceEEEEEecCCCCHHHHhcccC---------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCce
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKD---------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 658 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~---------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NI 658 (855)
+..+||||||++|+|.++|.... ....+++..+..|+.||+.||.|||+ ++||||||||+||
T Consensus 100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NI 176 (311)
T d1t46a_ 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNI 176 (311)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccccccc
Confidence 36899999999999999986432 23368999999999999999999999 8999999999999
Q ss_pred eeCCCCcEEEeecccc---------------------------ccCCCCcchhHHHHHHHHHHHHh-CCCCCCCchH---
Q 003033 659 LLDANFVSKLSDFEFL---------------------------ASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--- 707 (855)
Q Consensus 659 Lld~~~~~KL~DFg~~---------------------------~~~~~t~ksDVwSfGvvl~ellt-G~~pf~~~~~--- 707 (855)
|++.++.+||+|||.. ..+.++.++|||||||++|||+| |.|||.....
T Consensus 177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~ 256 (311)
T d1t46a_ 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (311)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999732 23567889999999999999999 6777754332
Q ss_pred HHHHHhhcccccccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 708 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 708 ~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
....+..+. ....|...+..+.+|+.+||+.||.+||++ .+|+++|+.+.
T Consensus 257 ~~~~i~~~~--------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~-~~il~~L~~~i 306 (311)
T d1t46a_ 257 FYKMIKEGF--------RMLSPEHAPAEMYDIMKTCWDADPLKRPTF-KQIVQLIEKQI 306 (311)
T ss_dssp HHHHHHHTC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-HHHHHHHHHHH
T ss_pred HHHHHhcCC--------CCCCcccccHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHhh
Confidence 222222221 112233445789999999999999999999 88999998753
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-40 Score=360.97 Aligned_cols=218 Identities=20% Similarity=0.326 Sum_probs=179.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
.++|.+.+.||+|+||.||+|... +..||||+++... .....+.+|+++|+.++|||||++++++ .+.+||||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 357899999999999999999986 6789999997643 2345688999999999999999999998 4578999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC--CCcEEEeecccc------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA--NFVSKLSDFEFL------ 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~~KL~DFg~~------ 674 (855)
|+||+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++. .+.+||+|||+.
T Consensus 83 ~~gg~L~~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 999999999953 23469999999999999999999999 89999999999999975 458999999742
Q ss_pred ------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccccCCCCCCCCh----
Q 003033 675 ------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDPLAGDWPF---- 730 (855)
Q Consensus 675 ------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--~~~~~~~~d~~~~~~p~---- 730 (855)
....|+.++|||||||++|+|++|.+||........... .+.+ .++.
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~---------~~~~~~~~ 228 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY---------TFDEEAFK 228 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC---------CCCHHHHT
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------CCChhhcc
Confidence 234578899999999999999999999987654432221 1111 1121
Q ss_pred hhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 731 VQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 731 ~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
..+.++.+|+.+||..||.+||++ +++++
T Consensus 229 ~~s~~~~~li~~~L~~dp~~R~s~-~eil~ 257 (321)
T d1tkia_ 229 EISIEAMDFVDRLLVKERKSRMTA-SEALQ 257 (321)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCH-HHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCH-HHHhc
Confidence 235679999999999999999999 77754
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.2e-40 Score=358.23 Aligned_cols=218 Identities=25% Similarity=0.350 Sum_probs=180.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|++.+.||+|+||.||+|..+ +..||||+++.. .....+.+.+|+.+|++++|||||++++++. +..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 46899999999999999999986 688999999753 2334677999999999999999999999984 4689999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc-------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------- 673 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------- 673 (855)
|||+||+|..++... ..+++.....++.||+.||.|||+ ++||||||||+||||+.+|.+||+|||+
T Consensus 84 E~~~gg~l~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~ 157 (316)
T d1fota_ 84 DYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157 (316)
T ss_dssp CCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eecCCcccccccccc---ccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence 999999999988533 457888999999999999999999 8999999999999999999999999973
Q ss_pred ---------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 674 ---------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 674 ---------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
+.+..|+.++|||||||+||+|+||++||...+.......... ....+|...+.++.+
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~-------~~~~~p~~~s~~~~~ 230 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN-------AELRFPPFFNEDVKD 230 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-------CCCCCCTTSCHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHc-------CCCCCCCCCCHHHHH
Confidence 2345688999999999999999999999987654432211110 011244455678999
Q ss_pred HHHHhhccCCCCCC-----ChHHHHH
Q 003033 739 LAMRCCEMSRKSRP-----ELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RP-----s~~~evl 759 (855)
++.+||..||.+|| ++ ++++
T Consensus 231 li~~~L~~dp~~R~~~~r~t~-~~il 255 (316)
T d1fota_ 231 LLSRLITRDLSQRLGNLQNGT-EDVK 255 (316)
T ss_dssp HHHHHTCSCTTTCTTSSTTTT-HHHH
T ss_pred HHHHHhhhCHHhccccchhhH-HHHH
Confidence 99999999999997 55 5553
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-40 Score=353.98 Aligned_cols=221 Identities=25% Similarity=0.277 Sum_probs=170.3
Q ss_pred ccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC-----hhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEEe
Q 003033 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-----PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 602 (855)
Q Consensus 532 ~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-----~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~Ey 602 (855)
.+++||+|+||+||+|..+ ++.||||+++...... ...+.+|+.+|++++|||||++++++. +..||||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 3578999999999999876 5789999997543221 356899999999999999999999994 468999999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
+.+|++..++. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+.
T Consensus 82 ~~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 82 METDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp CSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred hcchHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence 99887776653 34568888999999999999999999 89999999999999999999999999742
Q ss_pred ------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccc------ccccCC-------
Q 003033 675 ------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------KNLLDP------- 723 (855)
Q Consensus 675 ------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~------~~~~d~------- 723 (855)
....|+.++|||||||++|||+||.+||............... ....+.
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh
Confidence 1234688999999999999999999999876655432221100 000000
Q ss_pred ---CCCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 ---LAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 ---~~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.....+ ...+..+.+|+.+||+.||++|||+ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa-~e~L 278 (299)
T d1ua2a_ 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA-TQAL 278 (299)
T ss_dssp CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH-HHHH
T ss_pred hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCH-HHHh
Confidence 000111 1235689999999999999999999 6664
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=352.32 Aligned_cols=226 Identities=26% Similarity=0.389 Sum_probs=174.5
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|+..+.||+|+||.||+|... ++.||||+++.... .....+.+|+.+|++++|||||++++++. +..|||||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 58999999999999999999986 68899999976532 23568999999999999999999999984 46899999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
|+.++ +.+++.. .....+++..+..++.||+.||.|||+ ++||||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~~-~~~~~~~-~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~ 156 (298)
T d1gz8a_ 82 FLHQD-LKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156 (298)
T ss_dssp CCSEE-HHHHHHH-TTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ecCCc-hhhhhhh-hcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCc
Confidence 99654 4444432 234569999999999999999999999 89999999999999999999999999732
Q ss_pred -------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cccccc-------cCCC
Q 003033 675 -------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GKLKNL-------LDPL 724 (855)
Q Consensus 675 -------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~~~~~-------~d~~ 724 (855)
....++.++|||||||++|+|++|++||...+........ +..... ....
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc
Confidence 1223578999999999999999999999876544322211 110000 0000
Q ss_pred CCCCC-----------hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 725 AGDWP-----------FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 725 ~~~~p-----------~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...++ ...+.++.+|+.+||..||.+|||+ ++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~-~ell 281 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA-KAAL 281 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 00110 1234678999999999999999999 6664
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.9e-39 Score=348.11 Aligned_cols=225 Identities=24% Similarity=0.303 Sum_probs=178.5
Q ss_pred CCccccceeeccCceEEEEEEEC-CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEecee--cCceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~--~~~~~LV~Ey 602 (855)
++|..+++||+|+||+||+|.++ +..||||+++.... .....|.+|+.+|++++|||||+++++| .+..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 57999999999999999999887 58899999976532 2356799999999999999999999998 4468899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--------
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-------- 674 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-------- 674 (855)
+.++.+..+.. ....+++..+..|+.||+.||.|||+ ++||||||||+|||++.++.+||+|||..
T Consensus 82 ~~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 82 LDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp CSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred ehhhhHHHHHh---hcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCcc
Confidence 98777766653 34569999999999999999999999 79999999999999999999999999731
Q ss_pred ------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc-----------ccccc
Q 003033 675 ------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK-----------LKNLL 721 (855)
Q Consensus 675 ------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~-----------~~~~~ 721 (855)
....++.++|||||||++|||++|++||...+........ +. .....
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence 2344689999999999999999999999766543322111 00 00000
Q ss_pred CC----C---CCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 722 DP----L---AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 722 d~----~---~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.. . ...++...+..+.+|+.+||+.||++|||+ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-~ell 279 (286)
T d1ob3a_ 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA-KQAL 279 (286)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCH-HHHH
T ss_pred cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 00 0 011122345789999999999999999999 6664
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.3e-39 Score=359.85 Aligned_cols=218 Identities=22% Similarity=0.296 Sum_probs=180.8
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 600 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~ 600 (855)
++|+.++.||+|+||.||+|..+ +..||||++... .......+.+|+.+|+.++|||||++++++. +..++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 47999999999999999999986 688999998643 2234567899999999999999999999984 4678999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc------
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------ 674 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------ 674 (855)
||+.+|+|.+++... ..+++..+..|+.||+.||.|||+ ++||||||||+||||+.+|++||+|||++
T Consensus 121 e~~~~g~l~~~l~~~---~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~ 194 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred ccccccchhhhHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence 999999999998543 358999999999999999999999 89999999999999999999999999742
Q ss_pred ----------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHHHHHH
Q 003033 675 ----------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 738 (855)
Q Consensus 675 ----------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~l~~ 738 (855)
.+..++.++|||||||+||||+||++||...+........... ....|...+.++.+
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~-------~~~~p~~~s~~~~~ 267 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-------KVRFPSHFSSDLKD 267 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------CCCCCTTCCHHHHH
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC-------CCCCCccCCHHHHH
Confidence 3456889999999999999999999999876554322211110 11233445678999
Q ss_pred HHHHhhccCCCCCC-----ChHHHHH
Q 003033 739 LAMRCCEMSRKSRP-----ELGKDVW 759 (855)
Q Consensus 739 L~~~Cl~~dP~~RP-----s~~~evl 759 (855)
|+.+||..||.+|+ ++ ++++
T Consensus 268 li~~~L~~dP~kR~~~~r~t~-~ell 292 (350)
T d1rdqe_ 268 LLRNLLQVDLTKRFGNLKNGV-NDIK 292 (350)
T ss_dssp HHHHHSCSCTTTCTTSSTTTT-HHHH
T ss_pred HHHHHhhhCHHhccccccccH-HHHH
Confidence 99999999999995 66 5554
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.8e-40 Score=362.79 Aligned_cols=217 Identities=24% Similarity=0.297 Sum_probs=173.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCC---CCChhhHHHH---HHHHHhcCCCcceeEeceec--Cce
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQE---IDILSKIRHPNLVTLVGACP--EVW 596 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~E---i~iL~~l~HpnIV~l~g~~~--~~~ 596 (855)
.++|++.+.||+|+||.||+|... +..||||++.... ......+.+| +.+++.++|||||+++++|. +.+
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 357999999999999999999986 6889999986432 1223345554 66677778999999999984 468
Q ss_pred EEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc--
Q 003033 597 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL-- 674 (855)
Q Consensus 597 ~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~-- 674 (855)
|||||||++|+|.++|... ..+++..+..|+.||+.||.|||+ ++||||||||+||||+.+|.+||+|||++
T Consensus 83 ~ivmE~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~ 156 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD 156 (364)
T ss_dssp EEEECCCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhc---ccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeee
Confidence 9999999999999999543 458899999999999999999999 89999999999999999999999999732
Q ss_pred ---------------------c-cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH-HHHhhcccccccCCCCCCCChh
Q 003033 675 ---------------------A-SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALDTGKLKNLLDPLAGDWPFV 731 (855)
Q Consensus 675 ---------------------~-~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~-~~~~~~~~~~~~d~~~~~~p~~ 731 (855)
. +..|+.++|||||||+||||+||++||....... ..+... .......+|..
T Consensus 157 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~ 231 (364)
T d1omwa3 157 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----TLTMAVELPDS 231 (364)
T ss_dssp CSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHH-----SSSCCCCCCSS
T ss_pred cCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----cccCCCCCCCC
Confidence 2 3357899999999999999999999997543211 111111 11112234445
Q ss_pred hHHHHHHHHHHhhccCCCCCCCh
Q 003033 732 QAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 732 ~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
.+.++.+|+.+||+.||.+||+.
T Consensus 232 ~s~~~~~li~~~L~~dP~~R~t~ 254 (364)
T d1omwa3 232 FSPELRSLLEGLLQRDVNRRLGC 254 (364)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTT
T ss_pred CCHHHHHHHHHHcccCHHHhCCC
Confidence 66889999999999999999995
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-40 Score=356.79 Aligned_cols=232 Identities=22% Similarity=0.338 Sum_probs=176.4
Q ss_pred CccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHH--HHHhcCCCcceeEeceecC------ceEEEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEID--ILSKIRHPNLVTLVGACPE------VWTLVY 600 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~--iL~~l~HpnIV~l~g~~~~------~~~LV~ 600 (855)
+|...+.||+|+||.||+|++++..||||+++.. ....+.+|.+ .+.+++|||||+++|+|.+ .++|||
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 4666788999999999999999999999999643 2344555555 4467899999999999832 468999
Q ss_pred EecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 601 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSC-----KPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 601 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-----~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
|||++|+|.++|.. ..++|..++.++.+++.||.|||+. +.++||||||||+||||+.++.+||+|||+..
T Consensus 81 Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence 99999999999953 2589999999999999999999973 23699999999999999999999999998421
Q ss_pred c----------------------------C-------CCCcchhHHHHHHHHHHHHhCCCCCCCchHH------------
Q 003033 676 S----------------------------G-------ELTPKSDVYSFGIILLRLLTGRPALGITKEV------------ 708 (855)
Q Consensus 676 ~----------------------------~-------~~t~ksDVwSfGvvl~elltG~~pf~~~~~~------------ 708 (855)
. + .++.++|||||||+||||+||.+||+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 0 0 1355799999999999999999887421100
Q ss_pred -HHHHhhcccccccCCC-CCCC-ChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhHhc
Q 003033 709 -QYALDTGKLKNLLDPL-AGDW-PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 768 (855)
Q Consensus 709 -~~~~~~~~~~~~~d~~-~~~~-p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~~~ 768 (855)
............++|. ...+ +......+.+|+.+||..||.+|||+ .+|++.|+.+...
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCH-HHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCH-HHHHHHHHHHHHh
Confidence 0000000011111211 1111 12345679999999999999999999 8999999988653
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=355.83 Aligned_cols=218 Identities=25% Similarity=0.310 Sum_probs=180.1
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCC---CCCChhhHHHHHHHHH-hcCCCcceeEeceec--CceEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEIDILS-KIRHPNLVTLVGACP--EVWTLV 599 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~---~~~~~~~f~~Ei~iL~-~l~HpnIV~l~g~~~--~~~~LV 599 (855)
++|...+.||+|+||+||+|... ++.||||++++. .......+..|+.++. .++|||||++++++. +..|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 57999999999999999999986 688999999753 2334566788888776 689999999999984 468999
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc------
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF------ 673 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~------ 673 (855)
||||++|+|.+++... ..+++..+..++.||+.||.|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 82 mEy~~~g~L~~~i~~~---~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~ 155 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 155 (320)
T ss_dssp EECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeecCCCcHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhccc
Confidence 9999999999999543 358899999999999999999999 8999999999999999999999999973
Q ss_pred -------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCChhhHH
Q 003033 674 -------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 734 (855)
Q Consensus 674 -------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 734 (855)
+....|+.++|||||||++|+|+||++||.+.+.......... ....+|...+.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~-------~~~~~p~~~s~ 228 (320)
T d1xjda_ 156 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-------DNPFYPRWLEK 228 (320)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-------CCCCCCTTSCH
T ss_pred ccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc-------CCCCCCccCCH
Confidence 2345688899999999999999999999987654432211100 11234555678
Q ss_pred HHHHHHHHhhccCCCCCCChHHHH
Q 003033 735 QLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 735 ~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
.+.+|+.+||+.||.+||++..++
T Consensus 229 ~~~dli~~~L~~dP~~R~s~~~~l 252 (320)
T d1xjda_ 229 EAKDLLVKLFVREPEKRLGVRGDI 252 (320)
T ss_dssp HHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred HHHHHHHHhcccCCCCCcCHHHHH
Confidence 899999999999999999983344
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-39 Score=355.78 Aligned_cols=218 Identities=22% Similarity=0.370 Sum_probs=172.6
Q ss_pred CCccccc-eeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhc-CCCcceeEeceec------CceE
Q 003033 528 HNFDPSL-KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP------EVWT 597 (855)
Q Consensus 528 ~~f~~~~-~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIV~l~g~~~------~~~~ 597 (855)
++|.+.. .||+|+||.||+|... +..||||+++. ...+.+|+.++.++ +|||||+++++|. ..+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 5788765 5999999999999986 57899999963 45788999997765 8999999999873 3478
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC---CCcEEEeecccc
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---NFVSKLSDFEFL 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~~KL~DFg~~ 674 (855)
||||||+||+|.++|... ....|++..+..|+.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||++
T Consensus 86 ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHHH---cCCcccccccccccccccccccccccccccee
Confidence 999999999999999643 23469999999999999999999999 89999999999999975 567999999743
Q ss_pred ------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHH--HHHhhcccccccCCCCCCC
Q 003033 675 ------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 728 (855)
Q Consensus 675 ------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~--~~~~~~~~~~~~d~~~~~~ 728 (855)
.+..|+.++|||||||+||+|+||++||....... ..+... +......+
T Consensus 162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~-----i~~~~~~~ 236 (335)
T d2ozaa1 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR-----IRMGQYEF 236 (335)
T ss_dssp EECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------C-----CCSCSSSC
T ss_pred eeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHH-----HhcCCCCC
Confidence 23347889999999999999999999996443211 111110 11111112
Q ss_pred C----hhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 729 P----FVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 729 p----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
| ...+.++.+|+.+||+.||.+||++ .+++.
T Consensus 237 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-~eil~ 271 (335)
T d2ozaa1 237 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTI-TEFMN 271 (335)
T ss_dssp CTTHHHHSCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred CCcccccCCHHHHHHHHHHccCChhHCcCH-HHHHc
Confidence 2 2346789999999999999999999 66654
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=341.83 Aligned_cols=228 Identities=25% Similarity=0.349 Sum_probs=176.9
Q ss_pred ccCCccccceeeccCceEEEEEEEC---CeEEEEEEecCCCC--CChhhHHHHHHHHHhc---CCCcceeEeceec----
Q 003033 526 ATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL--QGPSEFQQEIDILSKI---RHPNLVTLVGACP---- 593 (855)
Q Consensus 526 ~~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l---~HpnIV~l~g~~~---- 593 (855)
..++|+++++||+|+||+||+|.+. ++.||||+++.... .....+.+|+.+|+.| +|||||+++++|.
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3468999999999999999999985 46799999975432 2345678899988776 7999999999882
Q ss_pred ---CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEee
Q 003033 594 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 670 (855)
Q Consensus 594 ---~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~D 670 (855)
...+++|||+.+|++..... .....+++.....++.||+.||.|||+ ++||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~d 159 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD 159 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECS
T ss_pred ccCceEEEEEEeccCCchhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecc
Confidence 24789999998887655443 334568999999999999999999999 8999999999999999999999999
Q ss_pred ccc------------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc-----c
Q 003033 671 FEF------------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK-----L 717 (855)
Q Consensus 671 Fg~------------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~-----~ 717 (855)
||+ +....|+.++|||||||++|||+||++||...+........ +. +
T Consensus 160 fg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 239 (305)
T d1blxa_ 160 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239 (305)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred hhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcc
Confidence 963 34566899999999999999999999999876544322111 00 0
Q ss_pred c-----------cccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 718 K-----------NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 718 ~-----------~~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
. .........++...+..+.+|+.+||+.||.+|||+ ++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa-~e~L 291 (305)
T d1blxa_ 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA-YSAL 291 (305)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred cccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCH-HHHh
Confidence 0 000000111223345788999999999999999999 6654
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-39 Score=340.86 Aligned_cols=212 Identities=21% Similarity=0.341 Sum_probs=173.0
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC------ChhhHHHHHHHHHhcC--CCcceeEeceec--Cc
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIR--HPNLVTLVGACP--EV 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~--HpnIV~l~g~~~--~~ 595 (855)
++|.+.+.||+|+||.||+|... +..||||+++..... ....+.+|+.+|++++ |||||++++++. +.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 57999999999999999999986 688999999764322 2345789999999997 899999999984 46
Q ss_pred eEEEEEecCC-CCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-CCcEEEeeccc
Q 003033 596 WTLVYEYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFEF 673 (855)
Q Consensus 596 ~~LV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~~KL~DFg~ 673 (855)
.++||||+.+ +++.+++... ..+++..+..|+.||+.||.|||+ ++||||||||+|||++. ++.+||+|||+
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~ 157 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGS 157 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECcccc
Confidence 8999999976 6788887533 468999999999999999999999 89999999999999985 47999999984
Q ss_pred cc-----------------------cCC-CCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCCCCCCCC
Q 003033 674 LA-----------------------SGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 729 (855)
Q Consensus 674 ~~-----------------------~~~-~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~~~~~~p 729 (855)
.. ... ++.++|||||||++|+|+||++||.....+. .+. ..++
T Consensus 158 a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~----~~~---------~~~~ 224 (273)
T d1xwsa_ 158 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RGQ---------VFFR 224 (273)
T ss_dssp CEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----HCC---------CCCS
T ss_pred ceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHh----hcc---------cCCC
Confidence 31 222 3567899999999999999999997644321 111 1233
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 730 FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 730 ~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.++.+|+.+||..||.+|||+ ++++
T Consensus 225 ~~~s~~~~~li~~~L~~dp~~R~s~-~eil 253 (273)
T d1xwsa_ 225 QRVSSECQHLIRWCLALRPSDRPTF-EEIQ 253 (273)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCH-HHHH
T ss_pred CCCCHHHHHHHHHHccCCHhHCcCH-HHHh
Confidence 3456789999999999999999999 6664
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-38 Score=347.55 Aligned_cols=223 Identities=25% Similarity=0.336 Sum_probs=171.4
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEeceec------C--ceEE
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------E--VWTL 598 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~------~--~~~L 598 (855)
+|...++||+|+||+||+|++. ++.||||++.... ..+.+|+.+|++++|||||+++++|. + .++|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 5888899999999999999986 6889999997543 23458999999999999999999872 1 3689
Q ss_pred EEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeecccc---
Q 003033 599 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFL--- 674 (855)
Q Consensus 599 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~--- 674 (855)
|||||++|.+..+.........+++..+..|+.||+.||.|||+ ++||||||||+||||+.++ .+||+|||+.
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 99999876544444323345579999999999999999999999 8999999999999999775 8999999732
Q ss_pred ----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh----cc------------
Q 003033 675 ----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK------------ 716 (855)
Q Consensus 675 ----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----~~------------ 716 (855)
....++.++|||||||++|||++|++||............ +.
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~ 253 (350)
T d1q5ka_ 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253 (350)
T ss_dssp CTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred cCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccc
Confidence 2345788999999999999999999999765543322111 00
Q ss_pred ccc-ccCC-----CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 LKN-LLDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 ~~~-~~d~-----~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... .... ....+....+..+.+|+.+||..||.+|||+ .+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta-~e~L 301 (350)
T d1q5ka_ 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP-LEAC 301 (350)
T ss_dssp --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 000 0000 0001112345679999999999999999999 6665
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-37 Score=332.04 Aligned_cols=224 Identities=25% Similarity=0.270 Sum_probs=175.7
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--CceEEEEE
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 601 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--~~~~LV~E 601 (855)
++|+.+++||+|+||+||+|++. ++.||||+++..... ....+.+|+.+|+.++|||||+++++|. +..++||+
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 47999999999999999999986 578999999765432 2467899999999999999999999984 46789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-------
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL------- 674 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~------- 674 (855)
|+.+++|..++. ....+++..+..++.|++.||.|||. ++||||||||+|||++.++.+||+|||..
T Consensus 82 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~ 155 (292)
T d1unla_ 82 FCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred eccccccccccc---cccccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCC
Confidence 999999888774 33568899999999999999999999 89999999999999999999999999732
Q ss_pred -------------------ccCCCCcchhHHHHHHHHHHHHhCCCCC-CCchHHHHHHhh----ccc--------ccccC
Q 003033 675 -------------------ASGELTPKSDVYSFGIILLRLLTGRPAL-GITKEVQYALDT----GKL--------KNLLD 722 (855)
Q Consensus 675 -------------------~~~~~t~ksDVwSfGvvl~elltG~~pf-~~~~~~~~~~~~----~~~--------~~~~d 722 (855)
....++.++|||||||++|||++|+.|| ...+........ +.. ....+
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (292)
T d1unla_ 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence 1223688999999999999999998875 333332211110 000 00000
Q ss_pred ----------CCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHH
Q 003033 723 ----------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 758 (855)
Q Consensus 723 ----------~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~ev 758 (855)
......+...+..+.+|+.+||+.||++|||+ +++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa-~e~ 280 (292)
T d1unla_ 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA-EEA 280 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH-HHH
T ss_pred ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCH-HHH
Confidence 01111223345678999999999999999999 665
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-37 Score=335.00 Aligned_cols=225 Identities=23% Similarity=0.334 Sum_probs=172.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCC--CChhhHHHHHHHHHhcCCCcceeEeceec----------
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP---------- 593 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIV~l~g~~~---------- 593 (855)
++|++.++||+|+||+||+|... ++.||||++..... .....+.+|+.+|++++||||++++++|.
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 57999999999999999999986 68899999865532 23567899999999999999999999872
Q ss_pred CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc
Q 003033 594 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF 673 (855)
Q Consensus 594 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~ 673 (855)
...++||||+.++.+.... .....++......|+.||+.||.|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 90 ~~~~iv~e~~~~~~~~~~~---~~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp -CEEEEEECCCEEHHHHHT---CTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCCCccchhh---hcccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecce
Confidence 2478999999887766554 334568889999999999999999999 8999999999999999999999999974
Q ss_pred c------------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccccCC
Q 003033 674 L------------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 723 (855)
Q Consensus 674 ~------------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~~d~ 723 (855)
. ....++.++|||||||++|||++|++||....................+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 2 1235788999999999999999999999765543322111110000000
Q ss_pred ------------------CCCCCCh-------hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 724 ------------------LAGDWPF-------VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 724 ------------------~~~~~p~-------~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.....+. .....+.+|+.+||++||++|||+ ++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa-~elL 303 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS-DDAL 303 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCH-HHHH
Confidence 0000000 113467899999999999999999 6664
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-37 Score=343.00 Aligned_cols=225 Identities=24% Similarity=0.310 Sum_probs=171.6
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC-ChhhHHHHHHHHHhcCCCcceeEeceecC------ceE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE------VWT 597 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIV~l~g~~~~------~~~ 597 (855)
+.+|..+++||+|+||+||+|... ++.||||+++..... ..+.+.+|+.+|++++|||||++++++.. ..+
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 457999999999999999999886 688999999764322 24578899999999999999999999832 234
Q ss_pred EEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc---
Q 003033 598 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL--- 674 (855)
Q Consensus 598 LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~--- 674 (855)
++++|+.+|+|.+++.. ..+++..+..++.||+.||.|||+ ++||||||||+||||+.++.+||+|||+.
T Consensus 87 ~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~ 159 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 159 (345)
T ss_dssp EEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeec
Confidence 55667779999999953 258999999999999999999999 89999999999999999999999999732
Q ss_pred --------------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhccccc---------
Q 003033 675 --------------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN--------- 719 (855)
Q Consensus 675 --------------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~--------- 719 (855)
....++.++||||+||++|+|++|++||.................
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T d1pmea_ 160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 239 (345)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHT
T ss_pred cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhh
Confidence 223467889999999999999999999976543322111100000
Q ss_pred ----------ccCCCCCCCCh-----hhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 720 ----------LLDPLAGDWPF-----VQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 720 ----------~~d~~~~~~p~-----~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
...+.....+. ..+.++.+|+.+||+.||.+||++ ++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta-~e~L 293 (345)
T d1pmea_ 240 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV-EQAL 293 (345)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred hhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 00001111111 223578999999999999999998 6664
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-37 Score=340.23 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=170.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCC--hhhHHHHHHHHHhcCCCcceeEeceecC--------
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE-------- 594 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIV~l~g~~~~-------- 594 (855)
.++|...++||+|+||+||+|... ++.||||+++...... .+.+.+|+.+|++++|||||+++++|..
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 568999999999999999999986 6889999997643322 3468899999999999999999999832
Q ss_pred ceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc
Q 003033 595 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL 674 (855)
Q Consensus 595 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~ 674 (855)
.+||||||| +++|..++.. ..|++..+..++.||+.||.|||+ ++||||||||+|||++.++.+||+|||.+
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a 168 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA 168 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccce
Confidence 368999999 6678777642 359999999999999999999999 89999999999999999999999999742
Q ss_pred -----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccc-------------
Q 003033 675 -----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK------------- 718 (855)
Q Consensus 675 -----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~------------- 718 (855)
....++.++|||||||++|+|++|++||...+............
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T d1cm8a_ 169 RQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 248 (346)
T ss_dssp EECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred eccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcc
Confidence 12346889999999999999999999997665433211110000
Q ss_pred --------cccCCCCCC---CChhhHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 003033 719 --------NLLDPLAGD---WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 760 (855)
Q Consensus 719 --------~~~d~~~~~---~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~ 760 (855)
......... .....+..+.+|+.+||..||.+|||+ ++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-~eiL~ 300 (346)
T d1cm8a_ 249 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA-GEALA 300 (346)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCH-HHHHH
T ss_pred hhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCH-HHHhc
Confidence 000000111 112335678999999999999999999 77754
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-38 Score=341.81 Aligned_cols=216 Identities=26% Similarity=0.328 Sum_probs=172.6
Q ss_pred CCccccceeeccCceEEEEEEEC-----CeEEEEEEecCCC----CCChhhHHHHHHHHHhcCC-CcceeEecee--cCc
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEV 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l~H-pnIV~l~g~~--~~~ 595 (855)
++|+..++||+|+||+||+|... ++.||||+++... ....+.+.+|+.+|++++| |||+++++++ ...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 56999999999999999999862 5789999987532 2345678899999999976 8999999998 446
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccccc
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFLA 675 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~~ 675 (855)
.++||||+.+|+|.+++... ..++......++.||+.||.|||+ ++||||||||+||||+.++.+||+|||+..
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~---~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~ 177 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 177 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eeeeeecccccHHHHHHHhc---ccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchh
Confidence 88999999999999998543 346778889999999999999999 899999999999999999999999997321
Q ss_pred ----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH--HHHHhhcccccccCCCC
Q 003033 676 ----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLA 725 (855)
Q Consensus 676 ----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~--~~~~~~~~~~~~~d~~~ 725 (855)
...++.++|||||||+||+|+||++||...... ...+..+... ..
T Consensus 178 ~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~-----~~ 252 (322)
T d1vzoa_ 178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-----SE 252 (322)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH-----CC
T ss_pred hhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc-----CC
Confidence 123677999999999999999999999654321 1111111111 11
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCCh
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPEL 754 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~ 754 (855)
..+|...+.++.+|+.+||++||.+||++
T Consensus 253 ~~~~~~~s~~~~~li~~~l~~dP~~R~s~ 281 (322)
T d1vzoa_ 253 PPYPQEMSALAKDLIQRLLMKDPKKRLGC 281 (322)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CCCcccCCHHHHHHHHHHcccCHHHcCCC
Confidence 23445667889999999999999999973
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-37 Score=335.96 Aligned_cols=225 Identities=20% Similarity=0.276 Sum_probs=175.1
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec-------Cc
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-------EV 595 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~-------~~ 595 (855)
.++|+..++||+|+||+||+|... ++.||||+++..... ..+.+.+|+.+|++++|||||++++++. ..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 568999999999999999999876 689999999865332 2346889999999999999999999873 13
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeecccc-
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEFL- 674 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~~- 674 (855)
.+++|+|+.+|+|.+++.. ..+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+|++|||..
T Consensus 97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~ 169 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169 (348)
T ss_dssp CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhc
Confidence 4677888889999999842 359999999999999999999999 89999999999999999999999999632
Q ss_pred ----------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhhcccccc------------
Q 003033 675 ----------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL------------ 720 (855)
Q Consensus 675 ----------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~~~~~~~------------ 720 (855)
....++.++|||||||++|+|++|++||...+..............
T Consensus 170 ~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (348)
T d2gfsa1 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249 (348)
T ss_dssp CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred ccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccch
Confidence 2234688999999999999999999999766543322111000000
Q ss_pred -----cC--CCCCCCC-----hhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 721 -----LD--PLAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 721 -----~d--~~~~~~p-----~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.. +.....+ ...+..+.+|+.+||..||.+|||+ ++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-~elL 299 (348)
T d2gfsa1 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-AQAL 299 (348)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred hhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCH-HHHh
Confidence 00 0000011 1234678999999999999999999 6664
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.2e-36 Score=329.04 Aligned_cols=220 Identities=20% Similarity=0.337 Sum_probs=171.9
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceec----CceEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP----EVWTLV 599 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~----~~~~LV 599 (855)
.++|++.++||+|+||+||+|+.. ++.||||+++.. ..+.+.+|+.+|..++ ||||++++++|. ...++|
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v 110 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence 357999999999999999999986 688999999753 4578999999999995 999999999883 348899
Q ss_pred EEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC-cEEEeecccc----
Q 003033 600 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFEFL---- 674 (855)
Q Consensus 600 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~~KL~DFg~~---- 674 (855)
||||.+|+|..+. ..+++..+..++.||+.||.|||+ ++||||||||+|||++.++ .+||+|||+.
T Consensus 111 ~e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 111 FEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred EeecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceecc
Confidence 9999999997764 358999999999999999999999 8999999999999998654 6999999842
Q ss_pred ---------------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCchH-HHHHH---------------hhcc-
Q 003033 675 ---------------------ASGELTPKSDVYSFGIILLRLLTGRPALGITKE-VQYAL---------------DTGK- 716 (855)
Q Consensus 675 ---------------------~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~-~~~~~---------------~~~~- 716 (855)
....++.++|||||||++|+|++|++||..... ..... ....
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 123468899999999999999999999964321 11100 0000
Q ss_pred -----cccccCC---------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 717 -----LKNLLDP---------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 717 -----~~~~~d~---------~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
+...... .........+.++.+|+.+||..||.+|||+ ++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-~e~L 317 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA-REAM 317 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCH-HHHH
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCH-HHHh
Confidence 0000000 0001112345789999999999999999999 6664
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-36 Score=327.69 Aligned_cols=229 Identities=21% Similarity=0.296 Sum_probs=173.4
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcceeEecee---cCceEEEEEe
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEY 602 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIV~l~g~~---~~~~~LV~Ey 602 (855)
++|++.+.||+|+||.||+|.+. ++.||||++.... ....+.+|+++++.++|+|+|.+++.| .+..++||||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~ 84 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 84 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence 46999999999999999999986 6899999987643 345689999999999988877666555 3467899999
Q ss_pred cCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeC---CCCcEEEeeccccc----
Q 003033 603 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFEFLA---- 675 (855)
Q Consensus 603 ~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~~KL~DFg~~~---- 675 (855)
+ +|+|.+.+.. ....+++..+..++.|++.||.|||+ ++||||||||+|||++ .+..+||+|||++.
T Consensus 85 ~-~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 85 L-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp C-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred c-CCchhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 9 5677666643 23469999999999999999999999 8999999999999875 45679999998431
Q ss_pred ----------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHh--hcccccccCCCC
Q 003033 676 ----------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDPLA 725 (855)
Q Consensus 676 ----------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~--~~~~~~~~d~~~ 725 (855)
+..++.++|||||||++|||+||++||........... .........+.
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI- 237 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH-
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh-
Confidence 23468899999999999999999999965432211110 00000000010
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 726 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 726 ~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
...+...+.++.+|+.+||..+|.+||++ +++.+.|+.+.
T Consensus 238 ~~~~~~~p~~~~~li~~cl~~~p~~RP~~-~~i~~~l~~~~ 277 (299)
T d1ckia_ 238 EVLCKGYPSEFATYLNFCRSLRFDDKPDY-SYLRQLFRNLF 277 (299)
T ss_dssp HHHTTTSCHHHHHHHHHHHHSCTTCCCCH-HHHHHHHHHHH
T ss_pred hHhccCCCHHHHHHHHHHccCChhHCcCH-HHHHHHHHHHH
Confidence 00111234779999999999999999999 78888888763
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-36 Score=331.57 Aligned_cols=222 Identities=19% Similarity=0.266 Sum_probs=172.2
Q ss_pred CCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCC--ChhhHHHHHHHHHhcCCCcceeEeceec--------Cc
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--------EV 595 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIV~l~g~~~--------~~ 595 (855)
++|++.++||+|+||+||+|.+. +..||||++...... ....+.+|+.+|++++|||||+++++|. ..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 67999999999999999999986 689999999865432 2346889999999999999999999983 35
Q ss_pred eEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeeccc--
Q 003033 596 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFEF-- 673 (855)
Q Consensus 596 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DFg~-- 673 (855)
.|+|||||.+| |.+.+. ..+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+|++|||+
T Consensus 97 ~~iv~Ey~~~~-l~~~~~-----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~ 167 (355)
T d2b1pa1 97 VYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_dssp EEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred eEEEEeccchH-HHHhhh-----cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhh
Confidence 78999999765 444442 248999999999999999999999 8999999999999999999999999962
Q ss_pred ----------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHHHHHHhh-----------------
Q 003033 674 ----------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----------------- 714 (855)
Q Consensus 674 ----------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~~~~~~~----------------- 714 (855)
+.+..+++++||||+||++|+|++|++||...+........
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 247 (355)
T d2b1pa1 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_dssp -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCH
T ss_pred ccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhh
Confidence 34566889999999999999999999999765433221100
Q ss_pred -------ccc-------cccc----CCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 715 -------GKL-------KNLL----DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 715 -------~~~-------~~~~----d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
... .... .+.....+...+..+.+|+.+||.+||.+|||+ ++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta-~elL 309 (355)
T d2b1pa1 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-DDAL 309 (355)
T ss_dssp HHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH-HHHH
T ss_pred hHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH-HHHh
Confidence 000 0000 000001112346789999999999999999999 6664
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.3e-34 Score=311.78 Aligned_cols=227 Identities=21% Similarity=0.263 Sum_probs=178.2
Q ss_pred cCCccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcCC-CcceeEecee--cCceEEEEE
Q 003033 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEVWTLVYE 601 (855)
Q Consensus 527 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H-pnIV~l~g~~--~~~~~LV~E 601 (855)
.++|.+.++||+|+||.||+|.+. ++.||||++.... ....+.+|++++..|.| +|++.+++++ ....++|||
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme 81 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 81 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence 357999999999999999999976 6889999986543 34568899999999975 8999998877 446789999
Q ss_pred ecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCC-----CCcEEEeeccccc-
Q 003033 602 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-----NFVSKLSDFEFLA- 675 (855)
Q Consensus 602 y~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~-----~~~~KL~DFg~~~- 675 (855)
|+ +|+|.+++... ...+++.....++.|++.||.|||+ ++||||||||+|||++. ++.+||+|||++.
T Consensus 82 ~~-~~~l~~~~~~~--~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~ 155 (293)
T d1csna_ 82 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 155 (293)
T ss_dssp CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred ec-CCCHHHHHHhh--ccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence 99 78999988543 3468999999999999999999999 89999999999999964 5789999998431
Q ss_pred -------------------------------cCCCCcchhHHHHHHHHHHHHhCCCCCCCchH---HHH--HHhhccccc
Q 003033 676 -------------------------------SGELTPKSDVYSFGIILLRLLTGRPALGITKE---VQY--ALDTGKLKN 719 (855)
Q Consensus 676 -------------------------------~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~---~~~--~~~~~~~~~ 719 (855)
...++.++|||||||++|||+||++||..... ... .+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (293)
T d1csna_ 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235 (293)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence 23477899999999999999999999964321 111 111111111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHHHHHhhhH
Q 003033 720 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 766 (855)
Q Consensus 720 ~~d~~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl~~L~~~~ 766 (855)
....+... .++++.+|+..|+..+|.+||+. +.+.+.|+.+.
T Consensus 236 ~~~~l~~~----~p~~l~~ii~~~~~~~~~~rP~y-~~l~~~l~~~~ 277 (293)
T d1csna_ 236 PLRELCAG----FPEEFYKYMHYARNLAFDATPDY-DYLQGLFSKVL 277 (293)
T ss_dssp CHHHHTTT----SCHHHHHHHHHHHHCCTTCCCCH-HHHHHHHHHHH
T ss_pred ChHHhcCC----CCHHHHHHHHHHhcCCcccCcCH-HHHHHHHHHHH
Confidence 11111122 34679999999999999999998 78888888763
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5.5e-32 Score=298.41 Aligned_cols=227 Identities=16% Similarity=0.225 Sum_probs=166.8
Q ss_pred CccccceeeccCceEEEEEEEC--CeEEEEEEecCCCCCChhhHHHHHHHHHhcC-----------CCcceeEeceec--
Q 003033 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----------HPNLVTLVGACP-- 593 (855)
Q Consensus 529 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----------HpnIV~l~g~~~-- 593 (855)
+|.+.++||+|+||+||+|+.. +..||||+++.... ..+.+.+|+.+|+.++ |||||++++++.
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 5999999999999999999885 68999999975421 2456788999998885 478999988873
Q ss_pred --CceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCC------c
Q 003033 594 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF------V 665 (855)
Q Consensus 594 --~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~------~ 665 (855)
...+++|+++..+..............+++..+..++.||+.||.|||+. .+|+||||||+||||+.++ .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~~ 170 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQ 170 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCcccccce
Confidence 34567777776665444333344556789999999999999999999973 5899999999999997654 4
Q ss_pred EEEeeccc----------------------cccCCCCcchhHHHHHHHHHHHHhCCCCCCCchHH---------HHHH-h
Q 003033 666 SKLSDFEF----------------------LASGELTPKSDVYSFGIILLRLLTGRPALGITKEV---------QYAL-D 713 (855)
Q Consensus 666 ~KL~DFg~----------------------~~~~~~t~ksDVwSfGvvl~elltG~~pf~~~~~~---------~~~~-~ 713 (855)
+|++|||. .....++.++|||||||++++|++|++||...... ...+ .
T Consensus 171 ~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~ 250 (362)
T d1q8ya_ 171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 250 (362)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred eeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHH
Confidence 89999973 23456789999999999999999999999533210 0000 0
Q ss_pred hccc-----------cc---------ccCC-----------CCCCCChhhHHHHHHHHHHhhccCCCCCCChHHHHH
Q 003033 714 TGKL-----------KN---------LLDP-----------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 759 (855)
Q Consensus 714 ~~~~-----------~~---------~~d~-----------~~~~~p~~~~~~l~~L~~~Cl~~dP~~RPs~~~evl 759 (855)
.+.. .. .+.. ....++...+..+.+|+.+||.+||.+|||+ ++++
T Consensus 251 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta-~e~L 326 (362)
T d1q8ya_ 251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA-GGLV 326 (362)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH-HHHH
T ss_pred hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCH-HHHh
Confidence 0000 00 0000 0122334567889999999999999999999 6664
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=2.7e-21 Score=193.65 Aligned_cols=128 Identities=15% Similarity=0.135 Sum_probs=100.5
Q ss_pred cccceeeccCceEEEEEEEC-CeEEEEEEecCCCCC-----C-------------hhhHHHHHHHHHhcCCCcceeEece
Q 003033 531 DPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-----G-------------PSEFQQEIDILSKIRHPNLVTLVGA 591 (855)
Q Consensus 531 ~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~-----~-------------~~~f~~Ei~iL~~l~HpnIV~l~g~ 591 (855)
.+.++||+|+||.||+|... +..||||+++..... . ...+.+|...|.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 45678999999999999875 689999998653211 0 1124568899999999999998876
Q ss_pred ecCceEEEEEecCCCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecccccCceeeCCCCcEEEeec
Q 003033 592 CPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 671 (855)
Q Consensus 592 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~~KL~DF 671 (855)
.. .+|+|||++++.+.++ +......++.|++.+|.|||. ++|+||||||+|||+++++ ++|+||
T Consensus 83 ~~--~~lvme~~~~~~~~~l----------~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~~-~~liDF 146 (191)
T d1zara2 83 EG--NAVLMELIDAKELYRV----------RVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEEG-IWIIDF 146 (191)
T ss_dssp ET--TEEEEECCCCEEGGGC----------CCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETTE-EEECCC
T ss_pred cC--CEEEEEeeccccccch----------hhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCCC-EEEEEC
Confidence 53 4799999988665432 223456789999999999999 8999999999999999655 899999
Q ss_pred ccc
Q 003033 672 EFL 674 (855)
Q Consensus 672 g~~ 674 (855)
|.+
T Consensus 147 G~a 149 (191)
T d1zara2 147 PQS 149 (191)
T ss_dssp TTC
T ss_pred CCc
Confidence 954
|
| >d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: Putative ethylene-responsive protein AT3g01520/F4P13 7 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.63 E-value=1.5e-15 Score=148.69 Aligned_cols=145 Identities=17% Similarity=0.238 Sum_probs=111.2
Q ss_pred eEEEEecCCc--------chhHHHHHHHhhhcC--CC---eEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHH
Q 003033 46 KIYVAVAKQV--------KESKSVLLWALQNSG--GK---RICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQ 112 (855)
Q Consensus 46 ~v~VAV~~~~--------~~s~~al~WAl~~~~--~~---~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~ 112 (855)
+|.||||++. .+|++||.||++++. +. .++++||..+.... ....+......+....+++..++
T Consensus 3 ki~vavd~s~~~~~~~~~~~S~~Al~wal~~~~~~~~~~~~L~~vhv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 79 (171)
T d2gm3a1 3 KVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDG---FDDVDSIYASPEDFRDMRQSNKA 79 (171)
T ss_dssp EEEEECCBCSSSCTTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC-------------CCCCSHHHHHHHTTSHHH
T ss_pred EEEEEEcCCcccCCCCCCHHHHHHHHHHHHHHHHCCCCCcEEEEEEeccccccc---cccccccccCHHHHHHHHHHHHH
Confidence 7999999762 379999999999983 33 58999998775421 11122233467777788888888
Q ss_pred HHHHHHHHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCe
Q 003033 113 DMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCH 192 (855)
Q Consensus 113 ~~~~~l~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~ 192 (855)
++.++|..|...|...+++++.++.++ +++++|++++.+++++.||||+...+.+.+.+.+ .++.+|.+++| |.
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~v~~G-~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~lG---Sv~~~vi~~~~--cp 153 (171)
T d2gm3a1 80 KGLHLLEFFVNKCHEIGVGCEAWIKTG-DPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVG---TVSAFCVKHAE--CP 153 (171)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEEES-CHHHHHHHHHHHHCCSEEEEEECCCC-----------CHHHHHHHHCS--SC
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeC-ChHHHHHHHHhhcCCcEEEeccCCccccccCccC---cHHHHHHhCCC--CC
Confidence 999999999999999999999988877 8999999999999999999999999888887776 69999999999 99
Q ss_pred EEEEecC
Q 003033 193 IWFICNG 199 (855)
Q Consensus 193 v~~i~kg 199 (855)
|++|-++
T Consensus 154 VlvV~~~ 160 (171)
T d2gm3a1 154 VMTIKRN 160 (171)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999654
|
| >d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: "Hypothetical" protein MJ0577 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.44 E-value=6.9e-13 Score=127.39 Aligned_cols=148 Identities=10% Similarity=0.133 Sum_probs=119.9
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEecCCCccccc-----CCCccCCCCccHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVHTPAQMIPV-----MGTKFPASSLEEEKVQAYREIERQDMHNH 117 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~~~ip~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 117 (855)
.+|.||||.+ +.|+.||+||++... +.++.|+||..+....+. ..+........++....+++...+++++.
T Consensus 4 ~~ILvavD~s-~~s~~al~~a~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (160)
T d1mjha_ 4 KKILYPTDFS-ETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK 82 (160)
T ss_dssp CEEEEECCSC-HHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCC-HHHHHHHHHHHHHHHhcCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 5899999998 999999999999763 678999999766542211 11212223344566667777888899999
Q ss_pred HHHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 118 LDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 118 l~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
|..|...|...+|+++.++.++ +++++|++++..++++-+|||+...+.+.+.|.+ .++.+|.+++| |.|++|-
T Consensus 83 l~~~~~~~~~~gv~~~~~~~~G-~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~G---S~a~~vl~~s~--~pVlvV~ 156 (160)
T d1mjha_ 83 MENIKKELEDVGFKVKDIIVVG-IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLG---SVTENVIKKSN--KPVLVVK 156 (160)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE-CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSC---HHHHHHHHHCC--SCEEEEC
T ss_pred HHHHHHHHHhcCCeEEEEEEec-cHHHHHhhhhhccccceEEeccCCCCcccccccC---cHHHHHHhcCC--CCEEEEc
Confidence 9999999999999999999988 8999999999999999999999998888888776 69999999999 9999996
Q ss_pred cC
Q 003033 198 NG 199 (855)
Q Consensus 198 kg 199 (855)
+.
T Consensus 157 ~~ 158 (160)
T d1mjha_ 157 RK 158 (160)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: Ubiquitin conjugation factor E4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1.1e-13 Score=122.74 Aligned_cols=73 Identities=29% Similarity=0.483 Sum_probs=67.1
Q ss_pred CCCCCCCcCCCcchhcccCCCcccCC-ccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 782 RCEPPPYFTCPIFQEVMQDPHVAADG-FTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 782 ~~~~P~~f~CPI~qEvm~dP~ia~dg-~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
...+|..|.|||+.++|.||+++.+| ++|++.+|..|+.. +.+||+|+.+|....|+||++||.+|++|+.++
T Consensus 16 ~~~~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~-~~~~P~~~~~l~~~~L~pN~~Lr~~I~~~~~~~ 89 (98)
T d1wgma_ 16 YADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER 89 (98)
T ss_dssp CCSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCCTTTSEECHHHHHHHHHHHHHS
T ss_pred hcCCcHHhCCcCchhHHHHHHhcccccchhhHHHHHHHHHh-cCCcccccccccchhhcchHHHHHHHHHHHHHH
Confidence 35689999999999999999999876 58999999999986 568999999999999999999999999999764
|
| >d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: E3 ubiquitin ligase PUB14 species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.37 E-value=1e-13 Score=117.85 Aligned_cols=72 Identities=43% Similarity=0.845 Sum_probs=69.1
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
..|..|.|||..++|.||++...|++|.+..|..|+..+..++|.|+.++...+|+||++||++|++|+++|
T Consensus 4 eiP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l~pN~~L~~~I~~~~~~~ 75 (78)
T d1t1ha_ 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESN 75 (78)
T ss_dssp CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHHHHS
T ss_pred CCCccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHCCCCCCcccccCCcccccchHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999988889999999999999999999999999999876
|
| >d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.32 E-value=2.4e-13 Score=116.15 Aligned_cols=72 Identities=28% Similarity=0.601 Sum_probs=68.9
Q ss_pred CCCCCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHhhC
Q 003033 784 EPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 855 (855)
Q Consensus 784 ~~P~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~~~ 855 (855)
..|..|.|||..++|.||+++..|++|++..|..|+..++.++|.|+.++....|+||++||++|++|+++|
T Consensus 3 eiP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l~pN~~L~~~I~~~l~~~ 74 (80)
T d2c2la2 3 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFISEN 74 (80)
T ss_dssp CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHHTTC
T ss_pred CCCccccCcCcCchhhhhcccCCcCeecHHHHHHHHhcCCccCCCccccccccccccHHHHHHHHHHHHHHC
Confidence 568999999999999999999999999999999999988889999999999999999999999999999876
|
| >d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: Hypothetical protein TTHA0895 species: Thermus thermophilus [TaxId: 274]
Probab=99.25 E-value=1.4e-11 Score=114.49 Aligned_cols=132 Identities=17% Similarity=0.209 Sum_probs=102.8
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+ ..|+.|++||++.. .+.+++|+||..+.... .+ ........+...+++++.|..+.
T Consensus 2 k~Ilv~~D~s-~~s~~a~~~a~~~a~~~~~~l~ll~V~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~l~~~~ 69 (135)
T d2z3va1 2 KTILLAYDGS-EHARRAAEVAKAEAEAHGARLIVVHAYEPVPDY--LG---------EPFFEEALRRRLERAEGVLEEAR 69 (135)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHHTCEEEEEEEECCCCTT--CC---------TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCC-HHHHHHHHHHHHHHHHcCCEEEEEEEecCCccc--cc---------cchhHHHHHHHHHHHHHHHHHHH
Confidence 4789999999 89999999999976 47899999999764321 11 11222333445566677777665
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEE
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i 196 (855)
. ..++...+.++...++.++|++++.+++++-||||+..++.+.+.+.+ .++.+|.+++| |+|.+|
T Consensus 70 ~---~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~G---s~~~~ll~~~~--~pVlvV 135 (135)
T d2z3va1 70 A---LTGVPKEDALLLEGVPAEAILQAARAEKADLIVMGTRGLGALGSLFLG---SQSQRVVAEAP--CPVLLV 135 (135)
T ss_dssp H---HHCCCGGGEEEEESCHHHHHHHHHHHTTCSEEEEESSCSSSCBCSSCB---HHHHHHHHHCS--SCEEEE
T ss_pred H---hcCCCeEEEEEEcCChHHHHHHHhhhhheeeEEeccCCCCcccccccC---cHHHHHHHhCC--CCEEeC
Confidence 5 446666666677779999999999999999999999988888777665 69999999999 999987
|
| >d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: Hypothetical protein Rv1636 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.17 E-value=1.2e-10 Score=109.44 Aligned_cols=138 Identities=12% Similarity=0.134 Sum_probs=101.4
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC-CCeEEEEEecCCC-cccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG-GKRICIIHVHTPA-QMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~-~~~~~lvHV~~~~-~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+ +.|+.||.||++... ....+++|+..+. ...+.. .......+....++..++++..++
T Consensus 6 k~ILv~vD~s-~~s~~al~~A~~la~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~ 75 (147)
T d1tq8a_ 6 KTVVVGTDGS-DSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAA---------DILKDESYKVTGTAPIYEILHDAK 75 (147)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHTTTSEEEEEEECCC-----------------------------CCTHHHHHHHHH
T ss_pred CEEEEEECCC-HHHHHHHHHHHHHHhcCCCEEEEEEEeccccccccc---------ccchhhhHHHHHHHHHHHHHHHHH
Confidence 5899999999 999999999998653 4445555554443 222111 011122345556678899999999
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
..|.+.++..-...+...++++.|++++.+++++-||||+...+.+.+.+.+ .++.+|.+++| |.|+||.
T Consensus 76 ~~~~~~~~~~~~~~~~~G~~~~~i~~~a~~~~~dlIv~g~~~~~~~~~~l~G---s~~~~ll~~~~--~pVlvV~ 145 (147)
T d1tq8a_ 76 ERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLG---SVPANVSRRAK--VDVLIVH 145 (147)
T ss_dssp HHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTB---BHHHHHHHHTT--CEEEEEC
T ss_pred HHHHHcCCCcEEEEEEecChHHHHHHhhhccceeEEEecCCCCCcccccccc---cHHHHHHHhCC--CCEEEEe
Confidence 9999999986555666668999999999999999999999998888888776 59999999999 9999985
|
| >d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: Universal stress protein A, UspA species: Haemophilus influenzae [TaxId: 727]
Probab=99.00 E-value=4.3e-10 Score=104.68 Aligned_cols=133 Identities=17% Similarity=0.129 Sum_probs=98.0
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhc--CCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~--~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~y~ 122 (855)
.+|.||||.+ +.|+.||.||+..+ .+..|.++||..+........ .+.....++....+ ++...+.
T Consensus 3 k~ILv~vD~s-~~s~~al~~A~~~a~~~~~~v~~lhv~~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~ 70 (140)
T d1jmva_ 3 KHILVAVDLS-EESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGL--------IDVNMSSMQDRIST---ETQKALL 70 (140)
T ss_dssp SEEEEEECCS-TTHHHHHHHHHHHHHHHTCEEEEEEEEECCGGGCCCC--------EEHHHHHHTTCCCC---HHHHHHH
T ss_pred CeEEEEECCC-HHHHHHHHHHHHHHHHcCCeEEEEEEeeecccccccc--------cccchHHHHHHHHH---HHHHHHH
Confidence 5899999999 89999999999887 478999999987654322111 11222223322222 3444455
Q ss_pred HHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhcccchhhHHHHhhCCCCCeEEEEe
Q 003033 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (855)
Q Consensus 123 ~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~~~s~~a~~v~k~ap~~C~v~~i~ 197 (855)
.++...++...+.++...+++++|++++.+++++-||||+..++... + + .++.+|.++++ |.|++|-
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~I~~~a~~~~~dliV~G~~~~~~~~--l-g---s~~~~li~~~~--~pVliVp 137 (140)
T d1jmva_ 71 DLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSK--L-M---SSTRQVMNTIK--IDMLVVP 137 (140)
T ss_dssp HHHHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEECCCCHHH--H-H---HHHHHHHTTCC--SEEEEEE
T ss_pred HHHHhcCCceEEEEEEecCHHHHHHHhhhhchhhEEEeccCCCCCCC--c-c---cHHHHHHhccC--CCEEEEe
Confidence 55666777777788888899999999999999999999987665442 2 2 48889999999 9999984
|
| >d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: Universal stress protein-like domain: Hypothetical protein Aq 178 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.83 E-value=4.1e-09 Score=97.39 Aligned_cols=119 Identities=11% Similarity=0.086 Sum_probs=93.4
Q ss_pred CeEEEEecCCcchhHHHHHHHhhhcC--CCeEEEEEecCCCccccc----CCCccCCCCccHHHHHHHHHHHHHHHHHHH
Q 003033 45 DKIYVAVAKQVKESKSVLLWALQNSG--GKRICIIHVHTPAQMIPV----MGTKFPASSLEEEKVQAYREIERQDMHNHL 118 (855)
Q Consensus 45 ~~v~VAV~~~~~~s~~al~WAl~~~~--~~~~~lvHV~~~~~~ip~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l 118 (855)
.+|.||+|.+ +.|+.||.||++... +.++.|+||..+...... .+. |. . ..+++..++++++.|
T Consensus 5 k~ILv~~D~S-~~s~~al~~A~~~a~~~~a~l~llhv~~~~~~~~~~~~~~~~--~~---~----~~~~e~~~~~~~~~l 74 (138)
T d1q77a_ 5 KVLLVLTDAY-SDCEKAITYAVNFSEKLGAELDILAVLEDVYNLERANVTFGL--PF---P----PEIKEESKKRIERRL 74 (138)
T ss_dssp EEEEEEESTT-CCCHHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHHHHCC--CC---C----THHHHHHHHHHHHHH
T ss_pred CEEEEEEeCC-HHHHHHHHHHHHhhhhccceEEEEEEccCccccccccccccc--ch---h----hhhhhhhhhhccccc
Confidence 5899999999 999999999999874 789999999875432211 111 11 1 123344556677777
Q ss_pred HHHHHHHhhcCceeEEEEeccCChhHHHHHHHHHcCCcEEEeecCCChhhHHhhhc
Q 003033 119 DMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMD 174 (855)
Q Consensus 119 ~~y~~~C~~~~V~~~~~~ie~~dv~k~i~e~i~~~~I~~LVmGa~~~~~~~r~~~~ 174 (855)
..+..-+...++.++..+.++ ++++.|++++.+++++-+|||+...+.+.|.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~v~~G-~~~~~I~~~a~~~~~DLIV~Gs~g~~~l~r~l~g 129 (138)
T d1q77a_ 75 REVWEKLTGSTEIPGVEYRIG-PLSEEVKKFVEGKGYELVVWACYPSAYLCKVIDG 129 (138)
T ss_dssp HHHHHHHHSCCCCCCEEEECS-CHHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHH
T ss_pred hhhcccccccceeEEEeeecc-hhHHHHHHhhhhccCCEEEEecCCCcHHHHHhcC
Confidence 888777778888998888887 7999999999999999999999998888887776
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.29 E-value=1.3e-06 Score=89.06 Aligned_cols=155 Identities=14% Similarity=0.121 Sum_probs=101.2
Q ss_pred CCccccceeeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEecee--cCceEEEEEecC
Q 003033 528 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYLP 604 (855)
Q Consensus 528 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~--~~~~~LV~Ey~~ 604 (855)
..|...+..+.|+.+.||+....+..+.||............+.+|..+|..+. +--+.+++.++ .+..++||++++
T Consensus 14 ~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~ 93 (263)
T d1j7la_ 14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred hceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecc
Confidence 345444444444457899987777888999987665555667889999988774 32244555554 446789999999
Q ss_pred CCCHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 003033 605 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK---------------------------------------- 644 (855)
Q Consensus 605 ~GsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------- 644 (855)
|.++.+.... ... ...++.+++..|..||+..
T Consensus 94 G~~~~~~~~~-----~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T d1j7la_ 94 GVLCSEEYED-----EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SEEHHHHTTT-----CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCS
T ss_pred cccccccccc-----ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccch
Confidence 9888665411 011 2233455555555555421
Q ss_pred ----------------CCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHH
Q 003033 645 ----------------PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRL 695 (855)
Q Consensus 645 ----------------~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~el 695 (855)
+..++|+|+.|.|||++.++.+-|.||+.+..+. + .|-++.+++.+
T Consensus 166 ~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~--~---~~Dla~~~~~~ 227 (263)
T d1j7la_ 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRAD--K---WYDIAFCVRSI 227 (263)
T ss_dssp SHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE--H---HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccCC--H---HHHHHHHHHHh
Confidence 1127999999999999987777899998776543 1 34456555555
|
| >d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: U-box domain: Pre-mRNA splicing factor Prp19 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.07 E-value=2.1e-07 Score=72.85 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=47.7
Q ss_pred cCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCc
Q 003033 789 FTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPN 841 (855)
Q Consensus 789 f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn 841 (855)
.+|||..++|+||++. ..|++|+++.|.+|+.. +.+||+|+.+|...+|+|.
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~-~~~CP~c~~~l~~~dLipi 53 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSIEEIVEI 53 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCCGGGCEEC
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhh-ccCCCccCCcCCHHhceeC
Confidence 4799999999999988 48999999999999997 6789999999999999884
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.85 E-value=2.2e-05 Score=85.33 Aligned_cols=74 Identities=18% Similarity=0.118 Sum_probs=52.1
Q ss_pred ceeeccCceEEEEEEEC--CeEEEEEEecCC----C---CCChhhHHHHHHHHHhcC-C--CcceeEeceecCceEEEEE
Q 003033 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----S---LQGPSEFQQEIDILSKIR-H--PNLVTLVGACPEVWTLVYE 601 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~----~---~~~~~~f~~Ei~iL~~l~-H--pnIV~l~g~~~~~~~LV~E 601 (855)
+.||.|....||+.... +..|+||.-.+. . .....+...|.++|..+. + ..+.+++++..+..++|||
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE 111 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME 111 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCCCCEEEEe
Confidence 46899999999998654 467899975432 1 113345677999888763 2 3566788888888889999
Q ss_pred ecCCCC
Q 003033 602 YLPNGS 607 (855)
Q Consensus 602 y~~~Gs 607 (855)
|+++..
T Consensus 112 ~L~~~~ 117 (392)
T d2pula1 112 DLSHLK 117 (392)
T ss_dssp CCTTSE
T ss_pred ccCCcc
Confidence 997644
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.41 E-value=0.0003 Score=70.44 Aligned_cols=153 Identities=16% Similarity=0.145 Sum_probs=85.4
Q ss_pred eeeccC-ceEEEEEEECC-eEEEEEEecCCCCCChhhHHHHHHHHHhcCCC--cceeEecee--cCceEEEEEecCCCCH
Q 003033 535 KIGEGG-YGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC--PEVWTLVYEYLPNGSL 608 (855)
Q Consensus 535 ~LG~G~-fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp--nIV~l~g~~--~~~~~LV~Ey~~~GsL 608 (855)
.+..|. -+.||+....+ ..+.+|...... ...+..|+..|+.+... .+.++++++ .+..++||+|++|.++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 344554 36789887764 457888866543 34578899998887532 245566654 3467899999987654
Q ss_pred HHH--------------h---cccC-CCCCC--CHHHHHHHHH--------------------HHHHHHHHHhhc----C
Q 003033 609 EDR--------------L---SCKD-NSPPL--SWQTRIRIAT--------------------ELCSVLIFLHSC----K 644 (855)
Q Consensus 609 ~~~--------------L---~~~~-~~~~l--~~~~~~~i~~--------------------qia~aL~yLH~~----~ 644 (855)
.+. | +... ...++ .+.....-.. .....+..+... .
T Consensus 94 ~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 173 (255)
T d1nd4a_ 94 LSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGE 173 (255)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSC
T ss_pred ccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccC
Confidence 321 1 0000 00001 1110100000 011122333221 1
Q ss_pred CCCceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHH
Q 003033 645 PHSIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRL 695 (855)
Q Consensus 645 ~~~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~el 695 (855)
+..++|+|+.|.|||++.+..+-|+||+.+..+.. .|-++.+++.+
T Consensus 174 ~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g~~-----~~Dla~~~~~~ 219 (255)
T d1nd4a_ 174 DLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADR-----YQDIALATRDI 219 (255)
T ss_dssp CEEEECSSCCGGGEEEETTEEEEECCCTTCEEEET-----HHHHHHHHHHH
T ss_pred CceEEeCCCCCcceEEeCCceEEEEEchhcccCCH-----HHHHHHHHHHh
Confidence 12379999999999999877788999987665422 33355555544
|
| >d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: bard1 RING domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00032 Score=60.46 Aligned_cols=62 Identities=16% Similarity=0.268 Sum_probs=55.8
Q ss_pred cCCCcchhcccCCCcc-cCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCCCcHHHHHHHHHHHh
Q 003033 789 FTCPIFQEVMQDPHVA-ADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 789 f~CPI~qEvm~dP~ia-~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~ 853 (855)
+.|||-.++|.+|+.. ..|++|-...|..|+.+ .||.++..+....|.||.+|+..|+.+..
T Consensus 23 l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~---~CP~Cr~~~~~~~l~~n~~l~~lv~~~~~ 85 (97)
T d1jm7b_ 23 LRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGT---GCPVCYTPAWIQDLKINRQLDSMIQLCSK 85 (97)
T ss_dssp TSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTT---BCSSSCCBCSCSSCCCCHHHHHHHHHHHH
T ss_pred CCCccCCchhhcCceeCCCCCchhHHHHHHHHhc---cccccCCcCchhhCcccHHHHHHHHHHHH
Confidence 5799999999999875 67999999999999853 59999999999999999999999988753
|
| >d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: brca1 RING domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.00039 Score=60.63 Aligned_cols=65 Identities=15% Similarity=0.354 Sum_probs=58.3
Q ss_pred cCCCcchhcccCCCcccCCccchHHhhhhhccCCC--CCCCCcCCCCCCCCCCCcHHHHHHHHHHHh
Q 003033 789 FTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGH--ETSPMTNLPLAHKNLVPNLALRSAIQEWLQ 853 (855)
Q Consensus 789 f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~--~~sp~T~~~l~~~~l~pn~~l~~~i~~w~~ 853 (855)
+.|||-.+++.+|+...-|++|-...|..|+.... ..||+.+..+....|.||..|++.|+++++
T Consensus 22 l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~ve~l~~ 88 (103)
T d1jm7a_ 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLK 88 (103)
T ss_dssp TSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCSSSHHHHHHHH
T ss_pred cCCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhhCCcCHHHHHHHHHHHH
Confidence 46999999999999999999999999999996533 579999999999999999999999888753
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.49 E-value=0.0029 Score=67.95 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=48.4
Q ss_pred ceeeccCceEEEEEEECC---------eEEEEEEecCCCCCChhhHHHHHHHHHhcC-CCcceeEeceecCceEEEEEec
Q 003033 534 LKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYL 603 (855)
Q Consensus 534 ~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIV~l~g~~~~~~~LV~Ey~ 603 (855)
..|+.|-.-.+|+..... ..|.+++.- . ........+|..+++.+. +.-..+++++|++ .+||||+
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~--g~I~efi 123 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG--GRLEEYI 123 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--EEEECCC
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC--ceEEEEe
Confidence 467878888999987642 346676654 2 223345568999999885 4334578888865 5799999
Q ss_pred CCCCH
Q 003033 604 PNGSL 608 (855)
Q Consensus 604 ~~GsL 608 (855)
+|.+|
T Consensus 124 ~g~~l 128 (395)
T d1nw1a_ 124 PSRPL 128 (395)
T ss_dssp CEEEC
T ss_pred ccccC
Confidence 87443
|
| >d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: V(D)J recombination activating protein 1 (RAG1), dimerization domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.18 E-value=0.0012 Score=55.57 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=55.4
Q ss_pred CCcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCC-CcHHHHHHH
Q 003033 787 PYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV-PNLALRSAI 848 (855)
Q Consensus 787 ~~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~-pn~~l~~~i 848 (855)
..+.|||-.++|.+|++..-|++|=+..|.+|++.++.++|+.+.++.-.+|. |..++++.+
T Consensus 22 ~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~l~~P~~~~l~~l 84 (86)
T d1rmda2 22 KSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNIL 84 (86)
T ss_dssp HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHH
T ss_pred cCcCCccCCcchhcceecCCCChhhHHHHHHHHhhCCCcCcccCCCCChhhccCHHHHHHHHh
Confidence 33689999999999999999999999999999988788999999999977776 788887765
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.86 E-value=0.015 Score=59.69 Aligned_cols=155 Identities=15% Similarity=0.133 Sum_probs=83.1
Q ss_pred eeccCceEEEEEEECCeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCc-----ceeEe-c----eecCceEEEEEecCC
Q 003033 536 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-----LVTLV-G----ACPEVWTLVYEYLPN 605 (855)
Q Consensus 536 LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-----IV~l~-g----~~~~~~~LV~Ey~~~ 605 (855)
|..|---+.|+....+..+++|+..... ....+..|+.+|..|...+ .+... | ........++.++.+
T Consensus 26 i~~G~~N~ny~v~t~~g~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~~g 103 (316)
T d2ppqa1 26 IAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEG 103 (316)
T ss_dssp ECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCC
T ss_pred CCCCcccCeEEEEECCCcEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeeeeccc
Confidence 4455557789988877789999986532 3455667788888774322 22111 1 112344566777665
Q ss_pred CCHHH--------------Hhcc----cC--CCCCCCHH------------------HHHHHHHHHHHHHHHHhh-cCCC
Q 003033 606 GSLED--------------RLSC----KD--NSPPLSWQ------------------TRIRIATELCSVLIFLHS-CKPH 646 (855)
Q Consensus 606 GsL~~--------------~L~~----~~--~~~~l~~~------------------~~~~i~~qia~aL~yLH~-~~~~ 646 (855)
..... .++. .. ........ .....+..+...+.-.+. .-|.
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~ 183 (316)
T d2ppqa1 104 MWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPA 183 (316)
T ss_dssp BCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCE
T ss_pred ccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCcccccc
Confidence 32210 0000 00 00000000 011111122222222221 2356
Q ss_pred CceecccccCceeeCCCCcEEEeeccccccCCCCcchhHHHHHHHHHHHHh
Q 003033 647 SIVHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYSFGIILLRLLT 697 (855)
Q Consensus 647 ~IvHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwSfGvvl~ellt 697 (855)
++||+|+.+.|||++.+...-|.||+.+..+.+ +|=+++++..++.
T Consensus 184 giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~~~-----~~DLAi~~~~~~~ 229 (316)
T d2ppqa1 184 GVIHADLFQDNVFFLGDELSGLIDFYFACNDLL-----AYDVSICLNAWCF 229 (316)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTCEEEEH-----HHHHHHHHHHHSB
T ss_pred ccccCCcchhhhhcccccceeEecccccccchh-----hhhHHHHHHHHhh
Confidence 899999999999999988888999987764432 5667888877755
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.21 E-value=0.034 Score=57.49 Aligned_cols=141 Identities=13% Similarity=0.186 Sum_probs=79.2
Q ss_pred eEEEEEEEC-CeEEEEEEecCCCCCChhhHHHHHHHHHhcCCCcc--eeEece-------ecCceEEEEEecCCCCHH--
Q 003033 542 GSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL--VTLVGA-------CPEVWTLVYEYLPNGSLE-- 609 (855)
Q Consensus 542 G~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI--V~l~g~-------~~~~~~LV~Ey~~~GsL~-- 609 (855)
-.||+.... +..|++|+.++.. ....++..|...|..|....| +..+.. ..+..+.+++|++|..+.
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~ 114 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD 114 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence 479998775 6779999987653 356778899999988852222 111111 134467889998763221
Q ss_pred ---H------Hh-------ccc--CCCCCCCHHH-------------------HHHHHHHHHHHHHHHh----hcCCCCc
Q 003033 610 ---D------RL-------SCK--DNSPPLSWQT-------------------RIRIATELCSVLIFLH----SCKPHSI 648 (855)
Q Consensus 610 ---~------~L-------~~~--~~~~~l~~~~-------------------~~~i~~qia~aL~yLH----~~~~~~I 648 (855)
. .| ... .....+++.. +..+...+...+..+. ...+.++
T Consensus 115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l 194 (325)
T d1zyla1 115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR 194 (325)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence 0 11 000 0111222211 1111112222333332 2235679
Q ss_pred eecccccCceeeCCCCcEEEeeccccccCCCCcchhHHH
Q 003033 649 VHGDLKPANILLDANFVSKLSDFEFLASGELTPKSDVYS 687 (855)
Q Consensus 649 vHrDLKp~NILld~~~~~KL~DFg~~~~~~~t~ksDVwS 687 (855)
||+|+.|.|||++++ ..+.||+.+..+.. --|+|.
T Consensus 195 iHgDlh~~NvL~~~~--~~~IDFdd~~~g~~--~~DLa~ 229 (325)
T d1zyla1 195 LHGDCHAGNILWRDG--PMFVDLDDARNGPA--VQDLWM 229 (325)
T ss_dssp CCSSCSGGGEEESSS--EEECCCTTCCEECT--THHHHT
T ss_pred ecCCCCcccEEEeCC--ceEEechhcccCcH--HHHHHH
Confidence 999999999999753 35899987665543 346653
|
| >d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: CBL species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.60 E-value=0.013 Score=48.06 Aligned_cols=52 Identities=17% Similarity=0.337 Sum_probs=46.8
Q ss_pred CcCCCcchhcccCCCcccCCccchHHhhhhhccCCCCCCCCcCCCCCCCCCC
Q 003033 788 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLV 839 (855)
Q Consensus 788 ~f~CPI~qEvm~dP~ia~dg~tye~~ai~~wl~sg~~~sp~T~~~l~~~~l~ 839 (855)
...|||-.+.+.+|++..-|+.|-.+.|..|+.+++.+||+++..+...+.+
T Consensus 23 ~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~~i 74 (79)
T d1fbva4 23 FQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPI 74 (79)
T ss_dssp TTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCCCS
T ss_pred CCCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCcee
Confidence 3579999999999999999999999999999998788999999999876643
|
| >d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: PP-loop ATPase domain: TilS-like protein Aq 1887 species: Aquifex aeolicus [TaxId: 63363]
Probab=88.46 E-value=0.9 Score=43.59 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=59.8
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhh---cCCCeEEEEEecCCCcccccCCCccCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQN---SGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~---~~~~~~~lvHV~~~~~~ip~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (855)
+++|.|||.++ ++|...|.++.+- ++...+.++||..... +- +.+ + ...
T Consensus 24 ~~kv~Va~SGG-~DS~~Ll~lL~~~~~~~~~~~i~~~~vdh~~r---------~~---s~~--------~-------~~~ 75 (216)
T d1wy5a1 24 ERRVLIAFSGG-VDSVVLTDVLLKLKNYFSLKEVALAHFNHMLR---------ES---AER--------D-------EEF 75 (216)
T ss_dssp CCEEEEECCSS-HHHHHHHHHHHHSTTTTTCSEEEEEEEECCSS---------TH---HHH--------H-------HHH
T ss_pred CCeEEEEeCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEeecccc---------cc---hhh--------h-------hhH
Confidence 47999999999 8887665554431 2345799999964321 00 000 1 112
Q ss_pred HHHHHhhcCceeEEEEeccCCh----------------hHHHHHHHHHcCCcEEEeecCCC
Q 003033 121 CLLICRQMGVRAEKLDTESEST----------------EKGILELISHYGIRKLVMGAAAD 165 (855)
Q Consensus 121 y~~~C~~~~V~~~~~~ie~~dv----------------~k~i~e~i~~~~I~~LVmGa~~~ 165 (855)
-..+|...+|.+...-++.... -+.+.+++.++|++.|+.|-..+
T Consensus 76 ~~~~~~~l~i~~~i~~~~~~~~~~~~~~~~~~~~R~~Ry~~l~~~a~~~~~~~ia~GH~~d 136 (216)
T d1wy5a1 76 CKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHHLN 136 (216)
T ss_dssp HHHHHHHHTCCEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHH
T ss_pred HHHHHHhhhhhhhhhccchhhhccCCccchHHHHHHHHHHHhhhhccccccceeEeeeecc
Confidence 3578888888776654432111 13567888899999999998754
|
| >d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: ThiI-like domain: Thiamine biosynthesis protein ThiI, C-terminal domain species: Bacillus anthracis [TaxId: 1392]
Probab=81.21 E-value=3.1 Score=38.95 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=28.6
Q ss_pred CCeEEEEecCCcchhHHHHHHHhhhcCCCeEEEEEecCC
Q 003033 44 EDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTP 82 (855)
Q Consensus 44 ~~~v~VAV~~~~~~s~~al~WAl~~~~~~~~~lvHV~~~ 82 (855)
+++|.||+.+. .+|..++.|+.+. |..+..||++..
T Consensus 4 ~gKvvv~~SGG-~DS~vla~ll~k~--g~~v~av~~~~~ 39 (218)
T d2c5sa1 4 GGKVMVLLSGG-IDSPVAAYLTMKR--GVSVEAVHFHSP 39 (218)
T ss_dssp TEEEEEECCSS-SHHHHHHHHHHHB--TEEEEEEEEECT
T ss_pred CCEEEEEecCc-HHHHHHHHHHHHc--CCeEEEEEEeCC
Confidence 46999999999 7887777777653 678999999754
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