BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003038
(854 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225440714|ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vitis vinifera]
Length = 848
Score = 1281 bits (3316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/862 (76%), Positives = 737/862 (85%), Gaps = 22/862 (2%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA VVKQA+TLARRRGHAQVTPLHVANTMLAA+ GLLRTACLQSH
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPASTS+PMLG H Q P+ISNALVAAFKRAQAHQRRGSIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNALVAAFKRAQAHQRRGSIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ+ VSS
Sbjct: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQAPSVSS 180
Query: 181 NKSKESNVLVLSQTAS----ATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGEC 236
KSKESN+LVLSQ+ K+ KP V DP+RNEDVM VIENLM+KR++N V+VGEC
Sbjct: 181 -KSKESNLLVLSQSPPMGQIGVKLGKPTVP-DPVRNEDVMSVIENLMNKRRKNTVIVGEC 238
Query: 237 LASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCL 296
LA+IEGVVRGV+DK++KGDVPEALRDVK + L + SF H +R EVEQ++ E+K+LV+SC+
Sbjct: 239 LATIEGVVRGVMDKVDKGDVPEALRDVKLISLPLFSFGHHSREEVEQKLGELKSLVKSCV 298
Query: 297 GRGIVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATF 355
GRG++L L DL+W ++RASSSEQ R YYC +EH+IME+GKLVCG GEN RFWLMGIATF
Sbjct: 299 GRGVILYLEDLKWTTDYRASSSEQGRNYYCPVEHMIMELGKLVCGFGENGRFWLMGIATF 358
Query: 356 QSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVS-WLLFE 414
Q+Y RC++GHPSLET+WSLHPLTIPA SL+LSL+ SQ +SKKA SG S WL+ E
Sbjct: 359 QTYSRCRTGHPSLETIWSLHPLTIPASSLALSLMP-----DSQFSSKKAGSGTSNWLMLE 413
Query: 415 GEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKD 474
G E KQLTCCADCSA FE EARS+ +S+CNSDS TS+LP WLQQYK+E K LS ND+D
Sbjct: 414 GGAE-KQLTCCADCSANFENEARSIPTSTCNSDSTTSTLPTWLQQYKDENKK-LSRNDQD 471
Query: 475 S-GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWA 533
VRDLCKKWNSIC+S HKQP+ SE+TLTFSS SPSSSTSGFSYDQQYPN H+TH+ W
Sbjct: 472 CVAVRDLCKKWNSICSSAHKQPHSSEKTLTFSSLSPSSSTSGFSYDQQYPNLHQTHQGWP 531
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIM 593
VVE KQSWR++HF S EA +K T EPSLR+YIPEH D K +SN NSTPNS SSSD+M
Sbjct: 532 VVEHKQSWRDNHFWVS-EALNK-TYEPSLRMYIPEHSDRK--YASNPNSTPNSASSSDVM 587
Query: 594 EMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE 653
EMEYV +FKELN+ENL +LCNALEKKVPWQKD + DIA+T+L+CRSG +RRKGK K+ SE
Sbjct: 588 EMEYVQRFKELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKN-SE 646
Query: 654 VKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR 713
KEETW FFQGVD DAKEKIA+ELARLVFGS NNFVSIALSSFSSTRADSTED RNKRSR
Sbjct: 647 TKEETWFFFQGVDMDAKEKIARELARLVFGSQNNFVSIALSSFSSTRADSTEDLRNKRSR 706
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
DEQSCSYIERFAEAV +NPHRVFL EDVEQADYCSQ G KRA E GRI S+G+E+SL D
Sbjct: 707 DEQSCSYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISLSD 766
Query: 774 AIVILSCESFSSRSRACSPPTKQKSDG-CEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQ 832
AI+ILSCESFSSRSRACSPP KQKSD EE+ G E SP VSLDLNICIDDD ED+
Sbjct: 767 AIIILSCESFSSRSRACSPPIKQKSDEFEEEKGGGGGEEISPCVSLDLNICIDDDGVEDE 826
Query: 833 SIDDIGLLESVDKRIIFKIMEL 854
SIDDIGLLESVD+RI FKI EL
Sbjct: 827 SIDDIGLLESVDRRITFKIQEL 848
>gi|147865471|emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]
Length = 828
Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/864 (73%), Positives = 713/864 (82%), Gaps = 46/864 (5%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA VVKQA+TLARRRGHAQVTPLHVANTMLAA+ GLLRTACLQSH
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPASTS+PMLG H Q P+ISNALVAAFKRAQAHQRRGSIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNALVAAFKRAQAHQRRGSIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ+ VSS
Sbjct: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQAPSVSS 180
Query: 181 NKSKESNVLVLSQTAS----ATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGEC 236
KSKESN+LVLSQ+ K+ KP V DP+RNEDVM
Sbjct: 181 -KSKESNLLVLSQSPPMGQIGVKLGKPTVP-DPVRNEDVMS------------------- 219
Query: 237 LASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISS--FRHMNRVEVEQRVEEIKNLVRS 294
VRGV+DK++KGDVPEALRDVK + L SS + + R +++ E+K+LV+S
Sbjct: 220 -------VRGVMDKVDKGDVPEALRDVKLISLPPSSDFWTSLQRRGPNRKLGELKSLVKS 272
Query: 295 CLGRGIVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIA 353
C+GRG++L L DL+W ++RASSSEQ R YYC +EH+IME+GKLVCG GEN RFWLMGIA
Sbjct: 273 CVGRGVILYLEDLKWTTDYRASSSEQGRNYYCPVEHMIMELGKLVCGFGENGRFWLMGIA 332
Query: 354 TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVS-WLL 412
TFQ+Y RC++GHPSLET+WSLHPLTIPA SL+LSL+ DSDLQSQ +SKKA SG S WL+
Sbjct: 333 TFQTYSRCRTGHPSLETIWSLHPLTIPASSLALSLM-PDSDLQSQFSSKKAGSGTSNWLM 391
Query: 413 FEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNND 472
EG E KQLTCCADCSA FE EARS+ +S+CNSDS TS+LP WLQQYK+E K LS ND
Sbjct: 392 LEGGAE-KQLTCCADCSANFENEARSIPTSTCNSDSTTSTLPTWLQQYKDENK-KLSRND 449
Query: 473 KDS-GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRD 531
+D VRDLCKKWNSIC+S HKQP+ SE+TLTFSS SPSSSTSGFSYDQQYPN H+TH+
Sbjct: 450 QDCVAVRDLCKKWNSICSSAHKQPHSSEKTLTFSSLSPSSSTSGFSYDQQYPNLHQTHQG 509
Query: 532 WAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSD 591
W VVE KQSWR++HF S EA +K T EPSLR+YIPEH D K +SN NSTPNS SSSD
Sbjct: 510 WPVVEHKQSWRDNHFWVS-EALNK-TYEPSLRMYIPEHSDRK--YASNPNSTPNSASSSD 565
Query: 592 IMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDH 651
+MEMEYV +FKELN+ENL +LCNALEKKVPWQKD + DIA+T+L+CRSG +RRKGK K+
Sbjct: 566 VMEMEYVQRFKELNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKN- 624
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR 711
SE KEETW FFQGVD DAKEKIA+ELARLVFGS NNFVSIALSSFSSTRADSTED RNKR
Sbjct: 625 SETKEETWFFFQGVDMDAKEKIARELARLVFGSQNNFVSIALSSFSSTRADSTEDLRNKR 684
Query: 712 SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
SRDEQSCSYIERFAEAV +NPHRVFL EDVEQADYCSQ G KRA E GRI S+G+E+SL
Sbjct: 685 SRDEQSCSYIERFAEAVGSNPHRVFLAEDVEQADYCSQMGIKRATERGRITNSNGEEISL 744
Query: 772 GDAIVILSCESFSSRSRACSPPTKQKSDG-CEEEKGAAMEGTSPSVSLDLNICIDDDSTE 830
DAI+ILSCESFSSRSRACSPP KQKSD EE+ G E SP VSLDLNICIDDD E
Sbjct: 745 SDAIIILSCESFSSRSRACSPPIKQKSDEFEEEKGGGGGEEISPCVSLDLNICIDDDGVE 804
Query: 831 DQSIDDIGLLESVDKRIIFKIMEL 854
D+SIDDIGLLESVD+RI FKI EL
Sbjct: 805 DESIDDIGLLESVDRRITFKIQEL 828
>gi|224091901|ref|XP_002309392.1| predicted protein [Populus trichocarpa]
gi|222855368|gb|EEE92915.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/869 (72%), Positives = 727/869 (83%), Gaps = 44/869 (5%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTA+AASV+KQA+TLARRRGHAQVTPLHVANTML+ASTGL RTACLQSH
Sbjct: 1 MRAGGCTVQQALTADAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLFRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQ-FPTISNALVAAFKRAQAHQRRGSIE 119
SHPLQCKALELCFNVALNRLPASTS+P+LG H Q FP+ISNALVAAFKRAQAHQRRGSIE
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSPILGTHSQQFPSISNALVAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQS P
Sbjct: 121 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSAPSV 180
Query: 180 SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLAS 239
S+KSKESN LVLSQ+ ++++V LDPI+NEDVM VIENL++KR+R+FV+VGE LAS
Sbjct: 181 SSKSKESNGLVLSQSPTSSQVGAKATVLDPIKNEDVMCVIENLVNKRRRSFVIVGESLAS 240
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRG 299
IE VV+GVIDK++KGDVPEALR+VK L + +SSF H +RVEVE ++EE+K VRS +G+G
Sbjct: 241 IEVVVKGVIDKVQKGDVPEALREVKFLTIPVSSFGHFSRVEVEHKLEELKIHVRSYMGKG 300
Query: 300 IVLNLGDLEWA-EFRA--SSSEQVRGYYCSIEHIIMEIGKLVCGIGE--NARFWLMGIAT 354
+VLNLGDL+WA E RA SSSEQ R ++C +E++I+E+GKL CGIGE N RFWLMGIAT
Sbjct: 301 VVLNLGDLKWAIENRASSSSSEQGRCFFCPMEYMIIELGKLACGIGENINGRFWLMGIAT 360
Query: 355 FQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESG-VSWLLF 413
FQ+YM+CKSGHPS T+ LHPLTIPAGSL LSLI +DSDL+ QST KA +G SW+L
Sbjct: 361 FQTYMKCKSGHPSGGTVLGLHPLTIPAGSLRLSLI-SDSDLRCQSTRNKAGNGSSSWILH 419
Query: 414 EGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
EG E+ KQLTCCADCSAKFE+EARS +S+C+SDS TS LPAWLQQ KNEK S+N
Sbjct: 420 EGGED-KQLTCCADCSAKFESEARSFPTSTCDSDSTTSGLPAWLQQCKNEKNLQNSDNQN 478
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWA 533
++DLC+KWNS C+SIH+Q Y+SE+TLTFSS SPSSST SYDQQYP F +TH +W
Sbjct: 479 SMSIKDLCRKWNSFCSSIHRQHYFSEKTLTFSSVSPSSST---SYDQQYPIFQQTHNEWP 535
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKD-LKQ-PLSSNRNSTPNSTSSSD 591
+VEPK LR+YIPEHKD KQ P SSN NSTPNSTSSSD
Sbjct: 536 IVEPKH----------------------LRMYIPEHKDHTKQLPFSSNPNSTPNSTSSSD 573
Query: 592 IMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDH 651
+ME+ Y+HKFKELN+ENL L ALEKKVPWQ+D + +IA+T+L+CRSG +RRKGK K+
Sbjct: 574 VMEVVYLHKFKELNAENLKILSIALEKKVPWQRDIIPEIASTILQCRSGMIRRKGKMKN- 632
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR 711
SE KEETWLFFQGVD +AKEKIAKELARLVFGS+++F+S++LSSFSSTRADSTED RNKR
Sbjct: 633 SESKEETWLFFQGVDVEAKEKIAKELARLVFGSNDSFISVSLSSFSSTRADSTEDCRNKR 692
Query: 712 SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
SRDEQSCSYIERF+EA SNNP RVFL+EDVEQADYCSQ GFKRAIESGRI S+G EV L
Sbjct: 693 SRDEQSCSYIERFSEAASNNPRRVFLVEDVEQADYCSQIGFKRAIESGRITNSNGQEVGL 752
Query: 772 GDAIVILSCESFSSRSRACSPPTKQKSDGCEEEK-----GAA-MEGTSPSVSLDLNICID 825
DAI+ILSCESFSSRSRACSPP KQ++DG EE+ GAA ME T+P +SLDLNI +D
Sbjct: 753 SDAIIILSCESFSSRSRACSPPIKQRTDGSYEEEDNAGAGAALMEDTTPCISLDLNISVD 812
Query: 826 DDST-EDQSIDDIGLLESVDKRIIFKIME 853
DD+ EDQSIDDIGLLESVD+RIIFKI E
Sbjct: 813 DDNILEDQSIDDIGLLESVDRRIIFKIQE 841
>gi|255583564|ref|XP_002532538.1| conserved hypothetical protein [Ricinus communis]
gi|223527727|gb|EEF29832.1| conserved hypothetical protein [Ricinus communis]
Length = 882
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/893 (70%), Positives = 725/893 (81%), Gaps = 54/893 (6%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LT EAA+VVKQA+TLARRRGHAQVTPLHVANTML++STGLLRTACLQSH
Sbjct: 1 MRAGGCTVQQALTTEAATVVKQAVTLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQ-FPTISNALVAAFKRAQAHQRRGSIE 119
SHPLQCKALELCFNVALNRLPASTS+P+LG H Q +P+ISNALVAAFKRAQAHQRRGSIE
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSPVLGTHAQQYPSISNALVAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ-STPV 178
NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ S PV
Sbjct: 121 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQNSAPV 180
Query: 179 SSNKSKESN----VLVLSQTASATKVSKPRVS------LDPIRNEDVMYVIENLMSKRKR 228
SS+KSKESN VL LS T + S LDPIR EDVM VIENL++KRKR
Sbjct: 181 SSSKSKESNNNNSVLALSHTQVGARTSCRSSPTTSTTSLDPIRKEDVMSVIENLINKRKR 240
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN-RVEVEQRVEE 287
+ V+VGECL S+EGVV+GV+DK+ KGDVPEAL++VK + +SS H++ RVEV+Q++EE
Sbjct: 241 SVVIVGECLVSLEGVVKGVMDKVIKGDVPEALKEVKFISFPLSSLGHLSSRVEVDQKLEE 300
Query: 288 IKNLVRSCLGRGIVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN-A 345
+K +RS L +G+VLNLGDL+W E+RA++ +EH+IMEIGKL GI EN
Sbjct: 301 LKVHIRSYLSKGVVLNLGDLKWVVEYRANN-------LSPMEHMIMEIGKLASGISENNG 353
Query: 346 RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAE 405
+FWL GIATFQ+YM+CKSG+PSLET+W LH LTIPAGSL LSLIT DS+ Q S+
Sbjct: 354 KFWLTGIATFQTYMKCKSGNPSLETVWGLHALTIPAGSLRLSLIT-DSNKVGQDGSR--- 409
Query: 406 SGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSS-LPAWLQQYKNEK 464
W++ EGEEE KQLTCC DC++KFE EARSLQSS+ NSDS T+S LPAWLQQYKNE
Sbjct: 410 ---CWIMLEGEEE-KQLTCCVDCTSKFENEARSLQSSTSNSDSTTTSTLPAWLQQYKNEN 465
Query: 465 KATLSNNDKDS-GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYP 523
+ +NND+D ++DLCKKWNSIC+SIH++PY SE+T+TFSS SPSS TS FSYD QYP
Sbjct: 466 QGVNNNNDQDCVSIKDLCKKWNSICSSIHQKPYSSEKTITFSSVSPSSFTSSFSYDHQYP 525
Query: 524 NFHKTH--RDWAVVEPKQSWREHHFLFSHEASDKSTS----EPSLRLYIPEHKDLKQP-- 575
NFH T+ RDW VVE KQSWR+HHF E +K S EPSLR+YIPEH + P
Sbjct: 526 NFHHTYHQRDWPVVESKQSWRDHHFWVGSETVNKINSCISIEPSLRMYIPEHNRDQYPKP 585
Query: 576 ---LSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIAN 632
SSN NSTPNSTSSSD+MEME+++KFKE+N+ENL LCNALEKKV WQKD + DIA+
Sbjct: 586 TIPFSSNPNSTPNSTSSSDVMEMEHLNKFKEMNAENLKILCNALEKKVTWQKDIIPDIAS 645
Query: 633 TVLKCRSGTMRRKGKFKDHS---EVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFV 689
T+L+CRSG +RRKGK +S + KEETWL FQGVD +AKEKIAKELA+L+FGS NNF+
Sbjct: 646 TILQCRSGMVRRKGKVTRNSSTEQAKEETWLLFQGVDVEAKEKIAKELAKLIFGSQNNFI 705
Query: 690 SIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQ 749
SI+LSSFSSTRADSTED RNKRSRDEQSCSYIERFAEAVS+NPHRVFL+EDVEQADYCSQ
Sbjct: 706 SISLSSFSSTRADSTEDCRNKRSRDEQSCSYIERFAEAVSSNPHRVFLVEDVEQADYCSQ 765
Query: 750 KGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGC------EE 803
GFKRAIE GRI G+EV L DAI+ILSCESFSSRSRACSPP KQK+D EE
Sbjct: 766 VGFKRAIERGRITNVKGEEVGLSDAIIILSCESFSSRSRACSPPVKQKTDDYIISQDQEE 825
Query: 804 EK--GAAMEGTSPSVSLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFKIMEL 854
EK GA ME +SP VSLDLNI IDDDS ED+SIDDIGLLESVD+RI+FKI EL
Sbjct: 826 EKGQGAKMEESSPCVSLDLNISIDDDSIEDRSIDDIGLLESVDRRIVFKIQEL 878
>gi|356498707|ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807485 [Glycine max]
Length = 867
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/876 (64%), Positives = 693/876 (79%), Gaps = 31/876 (3%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR G C +QQGLT EAAS+VKQA+TLA+RRGHAQVTPLHVANTML+ + GLLRTACLQSH
Sbjct: 1 MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSITNGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTST-PMLGGHCQF-----PTISNALVAAFKRAQAHQR 114
SHPLQCKALELCFNVALNRLPASTS+ PML G P+ISNALVAAFKRAQAHQR
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSSPMLQGSHHHHSHACPSISNALVAAFKRAQAHQR 120
Query: 115 RGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ 174
RGS+ENQQQPLLAVKI+LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ
Sbjct: 121 RGSVENQQQPLLAVKIKLEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ 180
Query: 175 STPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVG 234
N + + + + V LDPIR EDV VIENL S+RKR+ V+VG
Sbjct: 181 DNGSGKNNNNSNKAKENNSSGEKGSV------LDPIRVEDVASVIENLGSERKRSVVIVG 234
Query: 235 ECLASIEGVVRGVIDKIEKGDVPE--ALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLV 292
EC+ S+EGVVRGV++K++KGDV + LR VK + LS+SSF +++RVEVEQ+V E+++LV
Sbjct: 235 ECVTSLEGVVRGVMEKVDKGDVGDECTLRGVKFISLSLSSFGNVSRVEVEQKVGELRSLV 294
Query: 293 RSC-LGRGIVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN-ARFWL 349
++ +G VL LGDL+W +FRA S Q G YC ++H+++EIGKLV G+ EN ARFW+
Sbjct: 295 KASEHSKGYVLYLGDLKWVFDFRARGS-QGGGCYCPVDHMVVEIGKLVNGVEENGARFWV 353
Query: 350 MGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVS 409
MG+ATFQ+YMRCK+G PSLETLW LHP+TIPAGSL LSLIT DS +Q+Q T++KA++ +
Sbjct: 354 MGVATFQAYMRCKNGQPSLETLWGLHPITIPAGSLRLSLIT-DSGVQNQPTNEKADNRTT 412
Query: 410 WLLFEG-EEENKQLTCCADCSAKFEA-EARSLQSSSCNSDSPTSSLPAWLQQYKNEKKAT 467
WLL EG +++KQ C A+ S K E E RSLQSSS + +S+LPAWLQQYKNE K
Sbjct: 413 WLLLEGVGDDHKQQPCFAEPSTKNETTEVRSLQSSSTCNSDSSSTLPAWLQQYKNENKGI 472
Query: 468 LSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHK 527
N+ V +LCKKWNS+C+SI KQPY S++TL+ SS SPSSS S FSY+QQ+PN +
Sbjct: 473 THNDQNCVPVGELCKKWNSMCSSIQKQPYPSDKTLSLSSVSPSSSNSNFSYEQQHPNLLQ 532
Query: 528 THRDWAVVEP-KQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNS 586
TH +W V EP K S +HF S+ ++ +T+EP+LR+YIPE+ + KQP SS S+ +
Sbjct: 533 THHEWQVGEPPKDSLNNYHFWISNNGTNNNTNEPTLRVYIPENNN-KQPFSSPNPSSNPN 591
Query: 587 TSSS-DIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK 645
++SS DIME+E+V +FKELN+ENL +LCNALEKKVPWQKD + +IA+T+L+CRSG +RRK
Sbjct: 592 STSSSDIMEVEHVREFKELNTENLKTLCNALEKKVPWQKDIIPEIASTLLQCRSGMVRRK 651
Query: 646 GK-FKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADST 704
GK ++ EVKEETWLFFQGVD +AKEKIA+ELARLVFGS N+ VSIALS+F+STRADST
Sbjct: 652 GKVMRNSEEVKEETWLFFQGVDVEAKEKIARELARLVFGSQNDVVSIALSTFASTRADST 711
Query: 705 ED-SRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVT 763
ED SRNKRSR+E SCSYIERFAEA++ NPHRVFL+ED+EQADYCSQ GFKRAIE GR+
Sbjct: 712 EDYSRNKRSREETSCSYIERFAEAMACNPHRVFLVEDIEQADYCSQLGFKRAIERGRVAD 771
Query: 764 SSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKG----AAMEGTSPSVSLD 819
S G+EV+L DAI+ILSCESFSSRSRACSP KQK EE+ G A +E TSP VSLD
Sbjct: 772 SKGEEVALCDAIIILSCESFSSRSRACSPSVKQKPLTEEEKNGGDMVATLEVTSPCVSLD 831
Query: 820 LNICIDDDS-TEDQSIDDIGLLESVDKRIIFKIMEL 854
LNI IDD++ ED+S+D+IGLLESVDK++IF EL
Sbjct: 832 LNISIDDENEVEDKSVDEIGLLESVDKKVIFNFQEL 867
>gi|15231233|ref|NP_190817.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|4886278|emb|CAB43425.1| putative protein [Arabidopsis thaliana]
gi|44917467|gb|AAS49058.1| At3g52490 [Arabidopsis thaliana]
gi|332645430|gb|AEE78951.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 815
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/864 (59%), Positives = 639/864 (73%), Gaps = 67/864 (7%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT++Q LTA+AA+VVKQAM LARRRGHAQVTPLHVA+TML+A TGLLRTACLQSH
Sbjct: 1 MRAGGCTVEQALTADAANVVKQAMGLARRRGHAQVTPLHVASTMLSAPTGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLG-GHCQFPTISNALVAAFKRAQAHQRRGSIE 119
+HPLQC+ALELCFNVALNRLP ST +PMLG FP+ISNAL AAFKRAQAHQRRGSIE
Sbjct: 61 THPLQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
+QQQP+LAVKIE+EQLIISILDDPSVSRVMREAGFSS QVK+ VEQAVSLEICS++T S
Sbjct: 121 SQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKVEQAVSLEICSKTT--S 178
Query: 180 SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLAS 239
S+K KE +L P+RNEDVM VI NL+ K++RNFV+VGECLA+
Sbjct: 179 SSKPKEGKLLT------------------PVRNEDVMNVINNLVDKKRRNFVIVGECLAT 220
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRG 299
I+GVV+ V++K++K DVPE L+DVK + LS SSF +R +VE+++EE++ LV+SC+G+G
Sbjct: 221 IDGVVKTVMEKVDKKDVPEVLKDVKFITLSFSSFGQPSRADVERKLEELETLVKSCVGKG 280
Query: 300 IVLNLGDLEW---AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI--GENARFWLMGIAT 354
++LNLGDL W + R SS YC +EH+IMEIGKL CG+ G++ RFWLMG+AT
Sbjct: 281 VILNLGDLNWFVESRTRGSSLYNNNDSYCVVEHMIMEIGKLACGLVMGDHGRFWLMGLAT 340
Query: 355 FQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL-ITTDSDLQSQSTSKKAESGVSWLLF 413
Q+Y+RCKSG PSLE+LW L LTIPA S SL L + ++S+L+ KK+E+ VS L
Sbjct: 341 SQTYVRCKSGQPSLESLWCLTTLTIPATSNSLRLSLVSESELEV----KKSEN-VSLQL- 394
Query: 414 EGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
++ + QL+ C +CS KFE+EAR L+SS NS+ T +LPAWLQQYK E + S+ D
Sbjct: 395 --QQSSDQLSFCEECSVKFESEARFLKSS--NSNVTTVALPAWLQQYKKENQN--SHTDS 448
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFH--KTHRD 531
DS +++L KWNSIC+SIHK+P TL+ ++S S ST H +T+ D
Sbjct: 449 DS-IKELVVKWNSICDSIHKRPSLKTLTLSSPTSSFSGST-----QPSISTLHHLQTNGD 502
Query: 532 WAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQP--LSSNRNSTPNS-TS 588
W V+E HH + HE S LRL+IPEH ++ + SN NST NS S
Sbjct: 503 WPVIETNT--HRHHSVV-HETSH-------LRLFIPEHDSEQKTELVCSNPNSTMNSEAS 552
Query: 589 SSDIMEMEYVH-KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGK 647
SSD ME+E+ +FKE+N+ENL +LC ALE KVPWQKD V ++A TVLKCRSG+ RK
Sbjct: 553 SSDAMELEHASSRFKEMNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRK-- 610
Query: 648 FKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDS 707
+ + KE+TW+FFQG+D DAKEKIA+ELA+LVFGS ++FVSI LSSFSSTR+DS ED
Sbjct: 611 INGNEDKKEDTWMFFQGLDVDAKEKIARELAKLVFGSQDSFVSICLSSFSSTRSDSAEDL 670
Query: 708 RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGD 767
RNKR RDEQS SYIERF+EAVS +P+RV L+ED+EQADY SQ GFKRA+E GR+ SSG+
Sbjct: 671 RNKRLRDEQSLSYIERFSEAVSLDPNRVILVEDIEQADYLSQVGFKRAVERGRVCNSSGE 730
Query: 768 EVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDD 827
E SL DAIVILSCE F SRSRACSPP+ QKSDG ++ + + + V+LDLN+ ID
Sbjct: 731 EASLKDAIVILSCERFRSRSRACSPPSNQKSDGSDQPED---KNVATCVALDLNLSIDSA 787
Query: 828 ST-EDQSIDDIGLLESVDKRIIFK 850
E++S D+IGLLE+VD R FK
Sbjct: 788 YVCEEESCDEIGLLEAVDARFHFK 811
>gi|51536536|gb|AAU05506.1| At3g52490 [Arabidopsis thaliana]
Length = 837
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/886 (57%), Positives = 639/886 (72%), Gaps = 89/886 (10%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT++Q LTA+AA+VVKQAM LARRRGHAQVTPLHVA+TML+A TGLLRTACLQSH
Sbjct: 1 MRAGGCTVEQALTADAANVVKQAMGLARRRGHAQVTPLHVASTMLSAPTGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLG-GHCQFPTISNALVAAFKRAQAHQRRGSIE 119
+HPLQC+ALELCFNVALNRLP ST +PMLG FP+ISNAL AAFKRAQAHQRRGSIE
Sbjct: 61 THPLQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
+QQQP+LAVKIE+EQLIISILDDPSVSRVMREAGFSS QVK+ VEQAVSLEICS++T S
Sbjct: 121 SQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKVEQAVSLEICSKTT--S 178
Query: 180 SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLAS 239
S+K KE +L P+RNEDVM VI NL+ K++RNFV+VGECLA+
Sbjct: 179 SSKPKEGKLLT------------------PVRNEDVMNVINNLVDKKRRNFVIVGECLAT 220
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIK---------- 289
I+GVV+ V++K++K DVPE L+DVK + LS SSF +R +VE+++EE++
Sbjct: 221 IDGVVKTVMEKVDKKDVPEVLKDVKFITLSFSSFGQPSRADVERKLEELEADVERKLEEL 280
Query: 290 ------------NLVRSCLGRGIVLNLGDLEW---AEFRASSSEQVRGYYCSIEHIIMEI 334
LV+SC+G+G++LNLGDL W + R SS YC +EH+IMEI
Sbjct: 281 EADVERKLEELETLVKSCVGKGVILNLGDLNWFVESRTRGSSLYNNNDSYCVVEHMIMEI 340
Query: 335 GKLVCGI--GENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL-ITT 391
GKL CG+ G++ RFWLMG+AT Q+Y+RCKSG PSLE+LW L LTIPA S SL L + +
Sbjct: 341 GKLACGLVMGDHGRFWLMGLATSQTYVRCKSGQPSLESLWCLTTLTIPATSNSLRLSLVS 400
Query: 392 DSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTS 451
+S+L+ KK+E+ VS L ++ + QL+ C +CS KFE+EAR L+SS NS+ T
Sbjct: 401 ESELEV----KKSEN-VSLQL---QQSSDQLSFCEECSVKFESEARFLKSS--NSNVTTV 450
Query: 452 SLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSS 511
+LPAWLQQYK E + S+ D DS +++L KWNSIC+SIHK+P TL+ ++S S
Sbjct: 451 ALPAWLQQYKKENQN--SHTDSDS-IKELVVKWNSICDSIHKRPSLKTLTLSSPTSSFSG 507
Query: 512 STSGFSYDQQYPNFH--KTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEH 569
ST H +T+ DW V+E HH + HE S LRL+IPEH
Sbjct: 508 ST-----QPSISTLHHLQTNGDWPVIETNT--HRHHSVV-HETSH-------LRLFIPEH 552
Query: 570 KDLKQP--LSSNRNSTPNS-TSSSDIMEMEYVH-KFKELNSENLTSLCNALEKKVPWQKD 625
++ + SN NST NS SSSD ME+E+ +FKE+N+ENL +LC ALE KVPWQKD
Sbjct: 553 DSEQKTELVCSNPNSTMNSEASSSDAMELEHASSRFKEMNAENLATLCAALESKVPWQKD 612
Query: 626 TVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSH 685
V ++A TVLKCRSG+ RK + + KE+TW+FFQG+D DAKEKIA+ELA+LVFGS
Sbjct: 613 LVPELAKTVLKCRSGSSTRK--INGNEDKKEDTWMFFQGLDVDAKEKIARELAKLVFGSQ 670
Query: 686 NNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQAD 745
++FVSI LSSFSSTR+DS ED RNKR RDEQS SYIERF+EAVS +P+RV L+ED+EQAD
Sbjct: 671 DSFVSICLSSFSSTRSDSAEDLRNKRLRDEQSLSYIERFSEAVSLDPNRVILVEDIEQAD 730
Query: 746 YCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEK 805
Y SQ GFKRA+E GR+ SSG+E SL DAIVILSCE F SRSRACSPP+ QKSDG ++ +
Sbjct: 731 YLSQVGFKRAVERGRVCNSSGEEASLKDAIVILSCERFRSRSRACSPPSNQKSDGSDQPE 790
Query: 806 GAAMEGTSPSVSLDLNICIDDDST-EDQSIDDIGLLESVDKRIIFK 850
+ + V+LDLN+ ID E++S D+IGLLE+VD R FK
Sbjct: 791 D---KNVATCVALDLNLSIDSAYVCEEESCDEIGLLEAVDARFHFK 833
>gi|147827418|emb|CAN62072.1| hypothetical protein VITISV_031746 [Vitis vinifera]
Length = 861
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/875 (55%), Positives = 634/875 (72%), Gaps = 35/875 (4%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG C++QQ LTA+AAS VKQA+TLARRRGHAQVTPLHVA+ MLA+S+GLLR+ACL+SH
Sbjct: 1 MRAGVCSVQQVLTADAASXVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPAS+S+P+L H P++SNALVAAFKRAQAHQRR SIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASSSSPLLAPHSSHPSLSNALVAAFKRAQAHQRRASIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQP+LA+K+E+EQLIISIL DPSVSRVMREAGFSSTQ+++N+EQAVSL++CSQS P S
Sbjct: 121 QQQPILALKVEIEQLIISILHDPSVSRVMREAGFSSTQLRTNIEQAVSLDVCSQS-PAVS 179
Query: 181 NKSKESN---VLVLSQTASATKVSKPRVSL----DPIRNEDVMYVIENLMSKRKRNFVVV 233
+ SKESN +++ + + ++ + V+L D + EDV +++ SKR+RN VVV
Sbjct: 180 SLSKESNNPPLILGTNVSQSSTFIQFGVTLNNPFDEAQEEDVKSLLDAFTSKRRRNTVVV 239
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVR 293
GE LAS EGVVRG+++K E+GDVP LR V+ + L + S +++++ EVEQ++ ++ L++
Sbjct: 240 GETLASAEGVVRGLMNKFERGDVPGDLRYVQFISLPLFSLKNLSK-EVEQKLVKLNCLLK 298
Query: 294 SCLGRGIVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGI 352
S + RG+VL LGDL+W +EF ++ E+ R Y +EHIIME+G+++CGIG+ R WL+G
Sbjct: 299 SYVCRGVVLYLGDLKWVSEFESNYGER-RNYCSPVEHIIMELGRMMCGIGDRGRMWLLGT 357
Query: 353 ATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLL 412
ATFQ+YMRCK+GHPSLET+W LHPLTIP GSL L L DS+LQ + SK + G SW L
Sbjct: 358 ATFQTYMRCKAGHPSLETIWELHPLTIPVGSLGLGL-NLDSNLQGRFQSKASGDGTSWSL 416
Query: 413 FEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSD-------SPTSSLPAWLQQYKNEKK 465
+ +K LTC +CS F+ E++S+ S N + S +SSLP+WLQ+ EK+
Sbjct: 417 LQS--GDKHLTCSTNCSDNFDKESQSIACSFRNGESTTTITTSTSSSLPSWLQK---EKR 471
Query: 466 ATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNF 525
+ ++ + VRDLC KWNS C+S+HK+ + +E+ L FSS S SSTS SYDQ PN
Sbjct: 472 RKIMDDQECVQVRDLCNKWNSFCSSVHKKAHSTEKALNFSSPS-PSSTSISSYDQCSPNL 530
Query: 526 HKTHRDW-AVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQP--LSSNRNS 582
+ H W A++EPK +EH F S + EP ++I E ++ P LS+ +S
Sbjct: 531 QQNHLSWPAIIEPKPPLKEHQFWISENVDE--GLEPKFSMHIAE-RNFPIPDLLSNPNSS 587
Query: 583 TPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM 642
+++SS I + E ++ FKELN+ENL LCNALE++VPWQKD + +IA+T+L+CRSGT+
Sbjct: 588 PNSASSSEAIEDGEGLYGFKELNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTL 647
Query: 643 RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRAD 702
R K K K E KEETWL F GVD KEKIA+E+A+LVFGS + F+SI LSS STRAD
Sbjct: 648 RGKNKLKQR-EDKEETWLLFLGVDFQGKEKIAREIAKLVFGSXSKFISIGLSSLGSTRAD 706
Query: 703 STEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIV 762
STED +K++RDE SYIE+FAEAV NPHRVF IEDVEQ DY SQ G KR IESGRI
Sbjct: 707 STEDFLSKQARDEPVGSYIEKFAEAVHENPHRVFFIEDVEQLDYSSQMGVKRGIESGRIQ 766
Query: 763 TSSGDEVSLGDAIVILSCESFSSRSRACSPPTK--QKSDGCEEEKGAAMEGTSPSVSLDL 820
+ G+ SL DAI+I SCESFSS SRA SPP + + E+++ +E SP VSLDL
Sbjct: 767 IAGGEAFSLEDAIIIFSCESFSSVSRASSPPPMGLKSEENEEKDRDNELEKRSPCVSLDL 826
Query: 821 NICIDDDSTEDQ-SIDDIGLLESVDKRIIFKIMEL 854
N+ +D+ Q S+ D G+L+SVD++ IFKI EL
Sbjct: 827 NLSAEDNQEYGQNSVADTGVLDSVDRQXIFKIQEL 861
>gi|225464404|ref|XP_002269046.1| PREDICTED: uncharacterized protein LOC100254987 [Vitis vinifera]
Length = 840
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/868 (55%), Positives = 625/868 (72%), Gaps = 42/868 (4%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG C++QQ LTA+AAS+VKQA+TLARRRGHAQVTPLHVA+ MLA+S+GLLR+ACL+SH
Sbjct: 1 MRAGVCSVQQVLTADAASMVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPAS+S+P+L H P++SNALVAAFKRAQAHQRR SIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASSSSPLLAPHSSHPSLSNALVAAFKRAQAHQRRASIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQP+LA+K+E+EQLIISIL DPSVSRVMREAGFSSTQ+++N+EQAVSL++CSQS P S
Sbjct: 121 QQQPILALKVEIEQLIISILHDPSVSRVMREAGFSSTQLRTNIEQAVSLDVCSQS-PAVS 179
Query: 181 NKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ SKE ++ P D + EDV +++ SKR+RN VVVGE LAS
Sbjct: 180 SLSKE------------ITLNNP---FDEAQEEDVKSLLDAFTSKRRRNTVVVGETLASA 224
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGI 300
EGVVRG+++K E+GDVP LR V+ + L + S +++++ EVEQ++ ++ L++S + RG+
Sbjct: 225 EGVVRGLMNKFERGDVPGDLRYVQFISLPLFSLKNLSKEEVEQKLVKLTCLLKSYVCRGV 284
Query: 301 VLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYM 359
VL LGDL+W +EF ++ E+ R Y +EHIIME+G+++CGIG+ R WL+G ATFQ+YM
Sbjct: 285 VLYLGDLKWVSEFESNYGER-RNYCSPVEHIIMELGRMMCGIGDRGRMWLLGTATFQTYM 343
Query: 360 RCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEEN 419
RCK+GHPSLET+W LHPLTIP GSL L L DS+LQ + SK + G SW L + +
Sbjct: 344 RCKAGHPSLETIWELHPLTIPVGSLGLGL-NLDSNLQGRFQSKASGDGTSWSLLQS--GD 400
Query: 420 KQLTCCADCSAKFEAEARSLQSSSCNSD-------SPTSSLPAWLQQYKNEKKATLSNND 472
K LTC +CS F+ E++S+ S N + S +SSLP+WLQ+ EK+ + ++
Sbjct: 401 KHLTCSTNCSDNFDKESQSIACSFRNGESTTTITTSTSSSLPSWLQK---EKRRKIMDDQ 457
Query: 473 KDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDW 532
+ VRDLC KWNS C+S+HK+ + +E+ L FSS S SSTS SYDQ PN + H W
Sbjct: 458 ECVQVRDLCNKWNSFCSSVHKKAHSTEKALNFSSPS-PSSTSISSYDQCSPNLQQNHLSW 516
Query: 533 -AVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQP--LSSNRNSTPNSTSS 589
A++EPK +EH F S + EP ++I E ++ P LS+ +S +++SS
Sbjct: 517 PAIIEPKPPLKEHQFWISENVDE--GLEPKFSMHIAE-RNFPIPDLLSNPNSSPNSASSS 573
Query: 590 SDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFK 649
I + E ++ FKELN+ENL LCNALE++VPWQKD + +IA+T+L+CRSGT+R K K K
Sbjct: 574 EAIEDGEGLYGFKELNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLRGKNKLK 633
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
E KEETWL F GVD K+KIA+E+A+LVFGS + F+SI LSS STRADSTED +
Sbjct: 634 -QREDKEETWLLFLGVDFQGKDKIAREIAKLVFGSQSKFISIGLSSLGSTRADSTEDFLS 692
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
K++RDE SYIE+FAEAV NPHRVF IEDVEQ DY SQ G KR IESGRI + G+
Sbjct: 693 KQARDEPVGSYIEKFAEAVHENPHRVFFIEDVEQLDYSSQMGVKRGIESGRIQIAGGEAF 752
Query: 770 SLGDAIVILSCESFSSRSRACSPPTK--QKSDGCEEEKGAAMEGTSPSVSLDLNICIDDD 827
SL DAI+I SCESFSS SRA SPP + + E+++ +E SP VSLDLN+ +D+
Sbjct: 753 SLEDAIIIFSCESFSSVSRASSPPPMGLKSEENEEKDRDNELEKRSPCVSLDLNLSAEDN 812
Query: 828 STEDQ-SIDDIGLLESVDKRIIFKIMEL 854
Q S+ D G+L+SVD++ IFKI EL
Sbjct: 813 QEYGQNSVADTGVLDSVDRQFIFKIQEL 840
>gi|224113403|ref|XP_002316485.1| predicted protein [Populus trichocarpa]
gi|222865525|gb|EEF02656.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/878 (55%), Positives = 618/878 (70%), Gaps = 49/878 (5%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG C++QQ LT EA S+VKQA+ LARRRGHAQVTPLHVA+TMLA+STGLLR ACLQSH
Sbjct: 1 MRAGICSVQQALTPEAVSLVKQAVGLARRRGHAQVTPLHVASTMLASSTGLLRRACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPASTS+ +LG H +P++SNALVAAFKRAQAHQRRGSIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRGSIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQP+LA+KIE+EQLIISILDDPSVSRVM+EAGFSSTQVK+ VEQ VSLEIC QS+ S
Sbjct: 121 QQQPILALKIEIEQLIISILDDPSVSRVMKEAGFSSTQVKNKVEQTVSLEICPQSSLTVS 180
Query: 181 NKSKESNVLVLSQTASATKV------------SKPRVSLDPIRNEDVMYVIENLMSKRKR 228
+ KE ++ Q SA+ SKP LD +RN+DVM V+ L+ K KR
Sbjct: 181 CQPKE---IIKPQVLSASVSQSLPFSQFGIIHSKP---LDQVRNDDVMSVLNTLVGK-KR 233
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEI 288
N ++ GECLA+ E VVRGV+DK E+G+V LR V+ L + SFR +++ ++EQ++ E+
Sbjct: 234 NTIITGECLATAESVVRGVMDKFERGEVSGDLRSVRFKNLPLFSFRSLSKEDLEQKLMEL 293
Query: 289 KNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARF 347
+ +V+S + G+VL LGDL+W A+F +S EQ R YYC+ +HII+E+ +LV G E R
Sbjct: 294 RCIVKSYISTGVVLYLGDLKWIADFWSSYGEQRRSYYCTADHIILELKRLVHGFSETGRL 353
Query: 348 WLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQS-QSTSKKAES 406
WLMGIATFQ+YM+CK+GHPSLET+W L+P+TIP GSL+LSL DSD QS QS SK + +
Sbjct: 354 WLMGIATFQTYMKCKAGHPSLETMWELNPVTIPVGSLNLSL-KLDSDSQSHQSRSKASLN 412
Query: 407 GVSWLLFEGEEENKQLTCCADCSAKFEAEARSL-------QSSSCNSDSPTSSLPAWLQQ 459
G SW L E +N LTC D S F EA+SL +S+S + S SSLP WLQQ
Sbjct: 413 GSSWPLLESRVDN-HLTCWTDYSVNFNKEAQSLVGRTHNKESTSSVTISNNSSLPLWLQQ 471
Query: 460 YKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYD 519
K ++ T ND++ LC K S+ S+HKQ YY E+T+ F+S+ PS ++
Sbjct: 472 CKETERNT--TNDQEY----LCNKGISLFGSVHKQSYYPEKTIKFASSPPSPNSFSSQER 525
Query: 520 QQYPNFHKTHRDWAVV-EPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSS 578
P +TH W V+ E KQ +E+ S E S++ E SLR +P+ DL +S
Sbjct: 526 NTDP--QQTHLSWPVIFEHKQFEKENQIWIS-ECSNEGY-ESSLR-NVPK-PDLLSNPNS 579
Query: 579 NRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCR 638
+ NS +S + DI E V FKE N +L +L + LEKKVPWQKD + +IA T+L+CR
Sbjct: 580 SPNSASSSEAMDDI---EGVQSFKEFNDYSLKNLRSGLEKKVPWQKDIIPEIATTILECR 636
Query: 639 SGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS 698
SG +RKGK +H E K ETWLFF GVD + KEKIA+ELA+LVFGS +NFVSI LS+FSS
Sbjct: 637 SGMRKRKGKL-NHIEDKAETWLFFLGVDFEGKEKIARELAKLVFGSQSNFVSIGLSNFSS 695
Query: 699 TRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIES 758
+RADS E+S+NKR+RDE CSY+ER A++ NPHRVF +EDV+Q D CSQKG K+AIE+
Sbjct: 696 SRADSIEESKNKRARDELGCSYLERLGLALNENPHRVFFMEDVDQVDNCSQKGIKQAIEN 755
Query: 759 GRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEK--GAAMEGTSPSV 816
G + G++V L DAI+I SCESF S SR CSPP +QK+ E+K ME S +
Sbjct: 756 GNVTLPDGEKVPLKDAIIIFSCESFCSVSRTCSPPRRQKTGDNHEDKEDEDVMEEKSLVL 815
Query: 817 SLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFKIMEL 854
SLDLNI D+ + S+ + G+LESVD++++FKI EL
Sbjct: 816 SLDLNISFGDNGDDQCSLAEYGILESVDRQVVFKIQEL 853
>gi|255551163|ref|XP_002516629.1| conserved hypothetical protein [Ricinus communis]
gi|223544231|gb|EEF45753.1| conserved hypothetical protein [Ricinus communis]
Length = 864
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/877 (52%), Positives = 607/877 (69%), Gaps = 36/877 (4%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG C++QQ LTAEAA++VKQA++LARRRGHAQVTPLHVA+ MLA++ GLLR ACLQSH
Sbjct: 1 MRAGICSVQQALTAEAANIVKQAVSLARRRGHAQVTPLHVASAMLASTNGLLRRACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPASTS+ +LG H +P++SNALVAAFKRAQAHQRRGSIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRGSIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQP+LA+KIE+EQLIISILDDPSVSRVMREAGFSSTQVK+ VEQAVSLEICSQ T +S
Sbjct: 121 QQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQAVSLEICSQGTTATS 180
Query: 181 NKSKE---SNVLVLSQTASATKVSKPRVSLDP-----IRNEDVMYVIENLMSKRKRNFVV 232
+SKE + + + + S V+L + N+DVM V+ LM K KRN ++
Sbjct: 181 CQSKEITKPQIFSTNNVSPSLPFSHYGVTLSKPLDHEVSNDDVMSVLNTLMEK-KRNTII 239
Query: 233 VGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLV 292
GECLAS E VVR V++KIE+G P LR ++ + + S R + + EVEQ++ E++ V
Sbjct: 240 TGECLASTESVVRLVMNKIERGLAPGELRAMRFISFPLISLRDLPQEEVEQKLVELRCTV 299
Query: 293 RSCLGRGIVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMG 351
+S L RG+ L LGD++W AEF + EQ R YYCS E+IIME+ +L+ GIGE R WLMG
Sbjct: 300 KSYLNRGVFLYLGDIKWVAEFWSEYGEQRRSYYCSGEYIIMELKRLIRGIGETERLWLMG 359
Query: 352 IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWL 411
+ATFQ+YM+CKSG PSLET+W L+PL IP GSLSLSL DSDLQ + SK + +G W
Sbjct: 360 VATFQTYMKCKSGRPSLETIWELYPLPIPVGSLSLSL-NLDSDLQCRYRSKVSTNGYGWP 418
Query: 412 LFEGEEENKQLTCCADCSAKFEAEARSL-----QSSSCNSDSPTSSLPAWLQQYKNE-KK 465
E +N TC D S F +A+S+ + ++ + S +SSLP+WL+Q+K E ++
Sbjct: 419 KLESAVDNHS-TCFTDFSVNFNRDAQSIGCSQREFTTNFTVSTSSSLPSWLKQHKVETER 477
Query: 466 ATLSNNDKDSGVRDLCKKWNSICNSIH-KQPYYSERTLTFSSASPSSSTSGFSYDQQYPN 524
T+ + + + L KKWNS +S H K+ + +T+ F+S+ S + S + N
Sbjct: 478 ITIDDKEYCTNTSPLLKKWNSFGSSFHNKESHSPPKTIKFASSPASPISI--SSHECNTN 535
Query: 525 FHKTHRDWAVV-EPKQSWREHHFLFSHEASDKSTSEPSL-RLYIPEHKDLKQPLSSNRNS 582
++ W V+ EP+Q +E S E ++ SE +L + PE LS+ +S
Sbjct: 536 INQAPLSWPVIFEPRQFQKEQKIWLS-ECNNAEGSESNLISVTKPEL------LSNPNSS 588
Query: 583 TPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM 642
+++SS + E + FKELN++NL LC++LEKKVPWQKD + +IA +L+CRSG
Sbjct: 589 PNSASSSEAVDGTEGLQSFKELNNQNLKILCSSLEKKVPWQKDIIPEIATAILECRSGRS 648
Query: 643 RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRAD 702
+ K K + +E +EETWLFF GVD++ KEKIA+ELARLV+GS NFVSI LS++SSTR D
Sbjct: 649 KSKRKSNNRAE-REETWLFFLGVDSEGKEKIARELARLVYGSQANFVSIGLSNYSSTRTD 707
Query: 703 STEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIV 762
ST++S+NKR RDE C Y ERF A++ NPHRVF +EDVEQ DYCSQK K+AIESG++
Sbjct: 708 STDESKNKRGRDELGCGYHERFGLALNENPHRVFFMEDVEQVDYCSQKAIKKAIESGKVA 767
Query: 763 TSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPS--VSLDL 820
G+ L DAI+I ES+SS SRACSP + KS G +E K E + +SLDL
Sbjct: 768 LPGGENAPLKDAIIIFGSESYSSASRACSPSRRVKSSGEKEVKDEEDESDEKNKVLSLDL 827
Query: 821 NICI---DDDSTEDQSIDDIGLLESVDKRIIFKIMEL 854
NI I DDD E +I D G+L+SVD++I+FKI EL
Sbjct: 828 NIAIDVNDDDEDEYSNIADNGILQSVDRQILFKIQEL 864
>gi|356574695|ref|XP_003555481.1| PREDICTED: uncharacterized protein LOC100800986 [Glycine max]
Length = 831
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/867 (50%), Positives = 592/867 (68%), Gaps = 52/867 (5%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MR G C+IQ Q LT EAA+VVKQA+ LA RRGHAQVTPLHVA+ MLA STGLLR ACLQ
Sbjct: 1 MRGGICSIQLQALTPEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIE 119
HSHPLQCKALELCFNVALNRLPASTS+P+L P++SNALVAAFKRAQAHQRRGSIE
Sbjct: 61 HSHPLQCKALELCFNVALNRLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
NQQQ +LA+KIE+EQL+ISILDDPSVSRVMREAGFSST VK+ VEQAVS+E+CSQ
Sbjct: 121 NQQQHILALKIEVEQLVISILDDPSVSRVMREAGFSSTLVKTRVEQAVSMEVCSQKAQAK 180
Query: 180 SNKSKESNVLVLSQTASATKVSKP--RVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECL 237
N ++KP + +LD + N+DV V+ L ++RN V+VGE +
Sbjct: 181 EN------------------ITKPHHQPNLDHVNNDDVTSVLSEL--AKRRNTVIVGESV 220
Query: 238 ASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLG 297
+ EGVVRGVI++ E G+VP LR V+ + L + FR++++ EVEQ++ E++NLV+S +G
Sbjct: 221 TNAEGVVRGVIERFEVGNVPGDLRYVQFVSLPLMCFRNISKEEVEQKLMEVRNLVKSYVG 280
Query: 298 RGIVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQ 356
G+VL LGDL+W EF A+ EQ + YCS+EH++ME+ KLVCG GE++R WLMGI+TF+
Sbjct: 281 GGVVLYLGDLKWLFEFWANFREQ-KTNYCSVEHMVMELKKLVCGSGESSRLWLMGISTFK 339
Query: 357 SYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGE 416
+YM+CK HPSLET+W LHP TIP G LSLSL DSD Q+Q +K V++ G
Sbjct: 340 TYMKCKICHPSLETIWELHPFTIPVGILSLSL-NLDSDFQAQERNKVFFKDVAFEDRAGV 398
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSG 476
LTCC DC+ FE EA+S+ S+ TSSLP WLQ K E+++ + + +++
Sbjct: 399 R--NHLTCCRDCTINFEKEAQSITSTISKKACTTSSLPTWLQNCK-EERSDIMEDQENAR 455
Query: 477 VRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVE 536
++DLCKKWNS+CNSIH+ P +E+ + F S+SPSS TS S++++ NFH +H +W ++
Sbjct: 456 LKDLCKKWNSLCNSIHRHPSINEKQVFFVSSSPSSPTSVSSHERK-SNFHHSHLNWPIIS 514
Query: 537 PKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQP--LSSNRNSTPNSTSSSDIME 594
+ + L++ D S + +++P+ D+ +P LS+ +S +++SS +
Sbjct: 515 ESEKSPKECELYTETGDDGYDS--NFIMFMPD-SDVPKPDLLSNPNSSPNSASSSEAVDG 571
Query: 595 MEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEV 654
+E FKE N+EN LC+ALEKKVP K+ + +IA+TVL CRSG +R E
Sbjct: 572 LESTQMFKEPNAENHKILCDALEKKVPQHKEVIPEIASTVLHCRSGMRKRDQNHSMKRED 631
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRAD---STEDSRNKR 711
+ETW+FF GV++ AKE I++ELA++VFGS++NFV+I +SSFSS D + E S+ KR
Sbjct: 632 NQETWMFFLGVNSQAKESISRELAKVVFGSYSNFVTIGMSSFSSPEDDDDSTDEKSKRKR 691
Query: 712 SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
R+E SY +RF EAV+ NPHRVF +ED++Q DY SQKG ++AI+SG I G+ V L
Sbjct: 692 PREELKSSYAQRFGEAVNENPHRVFFLEDLDQVDYFSQKGVEQAIQSGSITLPGGESVPL 751
Query: 772 GDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGA-AMEGTSPSVSLDLNICIDDDS-- 828
DAIVI SCESF S SP K + C E KG +E S S+SLDLNI I+D+S
Sbjct: 752 MDAIVIFSCESFFS-----SP--KLRKSPCAENKGKETVEDESSSLSLDLNIAIEDESGG 804
Query: 829 ----TEDQSIDDIGLLESVDKRIIFKI 851
++ ++ +G + ++ ++I +I
Sbjct: 805 VAFGGDNATLSGVGGKKDMNGKVILEI 831
>gi|356533866|ref|XP_003535479.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 835
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/866 (51%), Positives = 584/866 (67%), Gaps = 43/866 (4%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MR G C+IQ Q LT EA +VVKQA+ LA RRGHAQVTPLHVA+ MLA STGLLR ACLQ
Sbjct: 1 MRGGICSIQLQALTPEATTVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIE 119
HSHPLQCKALELCFNVALNRLPASTS+P+L P++SNALVAAFKRAQAHQRRGSIE
Sbjct: 61 HSHPLQCKALELCFNVALNRLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
NQQQ +LA+KIE+EQL+ISILDDPSVSRVMREAGFSST VK+ VEQAVS+E+CSQ
Sbjct: 121 NQQQHILALKIEVEQLVISILDDPSVSRVMREAGFSSTLVKTRVEQAVSMEVCSQKAS-- 178
Query: 180 SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLAS 239
S + KP +LD + N+DV V+ L+ R++N V+VGE +A+
Sbjct: 179 ------------SDRIAGGSFMKP--NLDHVNNDDVTSVLSELV--RRKNTVIVGEGVAN 222
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRG 299
EGV R V+++ E G+VP LR V+ + L + FR++++ EVEQ++ EI+NLV+S +GRG
Sbjct: 223 AEGVAREVMERFEVGNVPGDLRYVQFVSLPLMCFRNISKEEVEQKLMEIRNLVKSYVGRG 282
Query: 300 IVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY 358
+VL LGDL+W EF A+ EQ R YYCSIE ++ME+ KLVCG GE++R WLMGIATF++Y
Sbjct: 283 VVLYLGDLKWLFEFWANFCEQKRNYYCSIEQMVMELKKLVCGSGESSRLWLMGIATFKAY 342
Query: 359 MRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEE 418
M+CK HPSLE +W LHP TIP GSLSLSL SD Q+Q SK V++ G
Sbjct: 343 MKCKICHPSLEAIWELHPFTIPVGSLSLSL-NFHSDFQAQERSKVFFKDVAFEDRTGVR- 400
Query: 419 NKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVR 478
LTCC DC FE EA+S+ + SSLP WLQ K E+++ + + + S +
Sbjct: 401 -NHLTCCRDCLINFEKEAQSITNCISKKVCTASSLPTWLQNCK-EERSDIMEDQESSRLE 458
Query: 479 DLCKKWNSICNSIHKQ-PYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVV-E 536
LCKKWNS+CNSIH++ P E+ F +S SS + S +++ NFH +H +W ++ E
Sbjct: 459 YLCKKWNSLCNSIHRRHPSIIEKPAVFFVSSSPSSPTSVSSNERKSNFHHSHLNWPIISE 518
Query: 537 PKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQP--LSSNRNSTPNSTSSSDIME 594
++S +E D + + +++P+ +D+ +P LS+ +S +++SS +
Sbjct: 519 SEKSPKECELYTETGDDDDDGYDSNFIMFMPD-RDVPKPDLLSNPNSSPNSASSSEAVDG 577
Query: 595 MEYVHKFKELNSENLTSLCNALEKKVPWQKDTVY-DIANTVLKCRSGTMRRKGKFKDHSE 653
+E FKE N+EN LC+ALEKK+P KD + +IA+TVL CRSG +R + E
Sbjct: 578 LESTQMFKEPNAENHKILCDALEKKIPQHKDVIVPEIASTVLHCRSGMRKRGLNHLMNRE 637
Query: 654 VKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRAD---STEDSRNK 710
+ETW+FF GV++ AKE I++ELA++VFGS++NFVSI +S+FSS D + E S+ K
Sbjct: 638 ENQETWMFFLGVNSQAKESISRELAKVVFGSYSNFVSIGMSNFSSPEDDHDSTDEKSKRK 697
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
R R+E SY++RF EAV+ NPHRVF +ED++Q DY SQKG K+AI+SG I SG+ V
Sbjct: 698 RPREELKSSYVQRFGEAVNENPHRVFFLEDLDQVDYFSQKGVKQAIQSGSITLPSGESVP 757
Query: 771 LGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGA--AMEGTSPSVSLDLNICIDDDS 828
L DAIVI SCESFSS P +KS C E KG ++ S S+SLDLN+ I+D+S
Sbjct: 758 LKDAIVIFSCESFSS-------PKLRKSP-CAENKGKEITVDDESSSLSLDLNLAIEDES 809
Query: 829 TEDQSIDDIGLLESVDKRIIFKIMEL 854
D G+LE VDK+I F I EL
Sbjct: 810 GGVALGGDNGILELVDKQINFNIQEL 835
>gi|357442825|ref|XP_003591690.1| Heat shock protein [Medicago truncatula]
gi|355480738|gb|AES61941.1| Heat shock protein [Medicago truncatula]
Length = 849
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/875 (50%), Positives = 591/875 (67%), Gaps = 50/875 (5%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MR G C+IQ Q LT EAA+VVKQA+ LA RRGHAQVTPLHVA+ MLA STG+LR ACLQ
Sbjct: 1 MRGGICSIQLQALTQEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGILRKACLQC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPMLG-GHCQFPTISNALVAAFKRAQAHQRRGSI 118
HSHPLQCKALELCFNVALNRLPAST +P+LG + P++SNALVAAFKRAQAHQRRG+I
Sbjct: 61 HSHPLQCKALELCFNVALNRLPASTQSPLLGPQYSTTPSLSNALVAAFKRAQAHQRRGTI 120
Query: 119 ENQQQP-LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
ENQQQ +LA+KIE+EQLIISILDDPSVSRVMREAGFSST VKS VE +L I ST
Sbjct: 121 ENQQQQHILALKIEVEQLIISILDDPSVSRVMREAGFSSTLVKSRVEVEQALPIEVSSTK 180
Query: 178 VSS----NKSKESNV--LVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFV 231
VSS N+SKE ++ VLS S TK +D + N+DV V+ L+ KR+RN V
Sbjct: 181 VSSEYHKNQSKELSLKPQVLSLGGSYTK------PIDCVNNDDVTSVLSELV-KRRRNTV 233
Query: 232 VVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNL 291
+VGE +++ EGV +GV+++ E GDVP LR V+ + L + FR++++ EVE++ E+++L
Sbjct: 234 IVGESVSNAEGVAKGVMERFEIGDVPMELRYVQFVSLPLICFRNISKEEVEKKFVEVRSL 293
Query: 292 VRSCLGRGIVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLM 350
V+S +GRG++L LGDL+W EF +S EQ R YYCS+EH++MEI KLV G GE++R WLM
Sbjct: 294 VKSYMGRGVILYLGDLKWLFEFWSSYCEQKRNYYCSVEHMVMEIKKLVSGSGESSRLWLM 353
Query: 351 GIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSW 410
GIA F++YM+CK HPSLET+W LHP TIP GSLSLSL DSD Q++ S +
Sbjct: 354 GIANFKTYMKCKISHPSLETIWELHPFTIPVGSLSLSL-NFDSDFQAKERSMVLFND--- 409
Query: 411 LLFEGE-EENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLS 469
L FE + KQLTCC DCS KFE EA SL +++ + + +SSLP WLQ K E+ T+
Sbjct: 410 LTFEDKVGVGKQLTCCRDCSIKFENEALSL-TNNISKKACSSSLPTWLQNCKEERSYTVE 468
Query: 470 NNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTH 529
+ + ++ ++DLCKKWNSICNSIH+QP ++ F +S SS + FS ++ NF +
Sbjct: 469 DQE-NARLKDLCKKWNSICNSIHRQPSILDKQDLFVLSSSPSSPTSFSSLEKKSNFQHSQ 527
Query: 530 RDWAVV-EPKQSWREHHFLFSHEA--SDKSTSEPSLRLYIPEHKDLKQP--LSSNRNSTP 584
+W ++ E ++ +E L++ A D + +L +++P+ +++ +P LS+ +S
Sbjct: 528 LNWPIISEQEKVPKECELLYTESAGGDDDGCYDGNLIMFMPQ-RNVPKPDLLSNPNSSPN 586
Query: 585 NSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR 644
+++SS + +E F E N ENL LC+ALE K P K+ + +IA+TVL CRSG +R
Sbjct: 587 SASSSEAVDGLESTELFNEHNEENLKILCDALENKFPQHKEIIQEIASTVLFCRSGMRKR 646
Query: 645 KGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRAD-- 702
F K+ETW+FF G D+ A+E I+KELA++VFGS NNF++I +S+FSS D
Sbjct: 647 GNNFFKRENHKQETWMFFLGDDSQARENISKELAKVVFGSCNNFMTIGMSTFSSLGNDDS 706
Query: 703 -STEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDV-EQADYCSQKGFKRAIESGR 760
S E S+ KR R E +Y++RF EAV+ NPHRVF +ED+ E+ D+ +QKG K+AIE G
Sbjct: 707 SSDEKSKRKRPRAELGSTYLQRFCEAVNENPHRVFFMEDLEEEVDHFTQKGIKKAIECGS 766
Query: 761 IVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAM----EGTSPSV 816
I G+ V L DAIVI S ESFSS S++ C E KG ++ ++
Sbjct: 767 ITIPGGESVPLKDAIVIFSSESFSSVSKS-------SQSSCAENKGKETMIEDHQSNLNL 819
Query: 817 SLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFKI 851
SLDLNI I ED DIG+LE VDK+ F +
Sbjct: 820 SLDLNIAI-----EDHDNADIGILELVDKKFSFNL 849
>gi|356577524|ref|XP_003556874.1| PREDICTED: uncharacterized protein LOC100775479 [Glycine max]
Length = 828
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/861 (50%), Positives = 581/861 (67%), Gaps = 43/861 (4%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MRAG C+IQ Q LT EAA++VKQA+TLA RRGHAQVTPLH+A MLA STGLLR LQ
Sbjct: 1 MRAGVCSIQLQALTPEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKVFLQC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPMLGG-HCQFPTISNALVAAFKRAQAHQRRGSI 118
HSHPLQ KALELCFNV+LNRLPA T +P+L + P++SNALVAAFKRAQAHQRRGSI
Sbjct: 61 HSHPLQYKALELCFNVSLNRLPAPTPSPLLSPPYSTTPSLSNALVAAFKRAQAHQRRGSI 120
Query: 119 ENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPV 178
ENQQQP+LA+KIE+EQLI+SILDDPS+SRVMREAGFSS VK+ VEQAVS+E+CSQ
Sbjct: 121 ENQQQPILALKIEMEQLIVSILDDPSISRVMREAGFSSALVKTRVEQAVSMEVCSQHQAS 180
Query: 179 SSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLA 238
N + + VL +DV V+ L+SKR RN V+VGE LA
Sbjct: 181 KENTTTKLQVL----------------------GDDVTSVLSELVSKR-RNTVIVGESLA 217
Query: 239 SIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGR 298
S EGV RGV++++E G V LR V+ + L + SFR++++ EVE+++ E++NLV+S +GR
Sbjct: 218 SAEGVARGVMERLETGSVQGELRFVQFVSLPLVSFRNISKEEVERKLVELRNLVKSHVGR 277
Query: 299 GIVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQS 357
G++L LGDL+W EF +S EQ YYCS+EH++ME+ KL+ G EN+R WLMGIATF++
Sbjct: 278 GLILYLGDLKWLFEFWSSYCEQRTNYYCSVEHMVMELKKLISGNRENSRLWLMGIATFRT 337
Query: 358 YMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEE 417
Y++ K+ HPSLET+W LHP T+P GSLSL+L DSD Q SK S+ E +
Sbjct: 338 YIKGKACHPSLETIWDLHPFTVPVGSLSLAL-NFDSDFHVQERSKVTFKDESFE--ERAK 394
Query: 418 ENKQLTCCADCSAKFEAEARSLQSS-SCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSG 476
K LTCC DCS FE EA+S+ SS + + T+SLP WL+ K E+ + + + ++
Sbjct: 395 VRKYLTCCRDCSLNFEKEAKSIASSFTISKRDCTTSLPTWLKNCKAERSRMMEDQE-NAK 453
Query: 477 VRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVE 536
+ D+CKKWNS C+S H P E+ F S+SPSS TS S++++ P+ + +H +W V+
Sbjct: 454 LWDICKKWNSFCSSAHGFPSNLEKPFLFISSSPSSPTSVSSHERK-PSLNLSHLNWPVIS 512
Query: 537 PKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIME-M 595
++ + L++ + E +L +++PE K L SN NS+PNS SSS+ +E +
Sbjct: 513 ERKEVPKECELYTETTVRNDSYEGNLIMFMPERNHPKPDLLSNPNSSPNSASSSEAVEGL 572
Query: 596 EYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVK 655
+ FK+ N ENL LC+ALEKK P QK TV +IA+TVL CRSG MR+ G + +
Sbjct: 573 DSTQMFKDHNDENLKILCDALEKKAPQQKKTVKEIASTVLLCRSG-MRKVGNHLVKRDDR 631
Query: 656 EETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDE 715
+ETW FF GVD+ AKE ++KELA+++FGS++NFVSI LS FS T E+S+NKR+RDE
Sbjct: 632 QETWFFFLGVDSQAKEMVSKELAKVIFGSYSNFVSIGLSCFSLTH----EESKNKRARDE 687
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
SY++RF EA++ NPHRVF +ED+EQ D+ S+KG K+ IESG I G+ V L DAI
Sbjct: 688 FGGSYLQRFGEALNENPHRVFFMEDLEQVDHFSKKGVKQGIESGAITLPGGESVPLKDAI 747
Query: 776 VILSCESFSS-RSRACSPP--TKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQ 832
VI S E FSS SRACSP T SD +E E +SLDLN+ I+ D ++
Sbjct: 748 VIFSSECFSSVLSRACSPARTTSPFSDEDMKENINNSEEKISCLSLDLNMAIEVDVQKNV 807
Query: 833 SIDDIG--LLESVDKRIIFKI 851
+D +LE VDK+I FKI
Sbjct: 808 HLDGETDEILELVDKKINFKI 828
>gi|356533304|ref|XP_003535205.1| PREDICTED: uncharacterized protein LOC100811773 [Glycine max]
Length = 836
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/870 (50%), Positives = 578/870 (66%), Gaps = 53/870 (6%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MRAG C+IQ Q LT+EAA++VKQA+TLA RRGHAQVTPLH+A MLA STGLLR ACLQ
Sbjct: 1 MRAGVCSIQLQALTSEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKACLQC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPML-----GGHCQFPTISNALVAAFKRAQAHQR 114
HSHPLQ KALELCFNV+LNRLPAST P+L P++SNALVAAFKRAQAHQR
Sbjct: 61 HSHPLQYKALELCFNVSLNRLPASTPNPLLISPPYNSTTTTPSLSNALVAAFKRAQAHQR 120
Query: 115 RGSI-ENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE-IC 172
RGSI +NQQQP+L +KI++EQLI+SILDDPS+SRVMREAGFSS+ VK+ VEQAVS+E +C
Sbjct: 121 RGSIDQNQQQPILTLKIKVEQLIVSILDDPSISRVMREAGFSSSLVKTRVEQAVSMELVC 180
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVV 232
SQ S + E VL +DV V+ L+SKR RN V+
Sbjct: 181 SQQQAYSKENTTELQVL----------------------GDDVTSVLSELVSKR-RNTVI 217
Query: 233 VGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLV 292
VGE LAS EG+VRG+I+ +E+G V LR V+ + L + SFR++ + EVE+++ E++NLV
Sbjct: 218 VGESLASPEGIVRGLIENLERGSVQGELRFVQFVSLPLVSFRNIGKKEVERKLVELRNLV 277
Query: 293 RSCLGRGIVLNLGDLEWA-EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMG 351
+S +GRG +L LGDL+W EF +S EQ YYCS+ HI+ME+ KL+ G GEN R WLMG
Sbjct: 278 KSHVGRGFILYLGDLKWLFEFWSSYCEQRTNYYCSVVHIVMELKKLISGNGENGRLWLMG 337
Query: 352 IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL-ITTDSDLQSQSTSKKAESGVSW 410
IATF +YM+ ++ HPSLET+W LH T+P SL L +T DSD Q Q SK S+
Sbjct: 338 IATFGTYMKGQACHPSLETIWDLHLFTVPVLLSSLRLGLTFDSDFQVQERSKVTFKDESF 397
Query: 411 LLFEGEEENKQLTCCADCSAKFEAEARSLQSS-SCNSDSPTSSLPAWLQQYKNEKKATLS 469
E + K LTCC D S FE EA+S +S + + T++LP WLQ K E+++ +
Sbjct: 398 E--ERAKVRKYLTCCRDFSLNFEKEAKSTTNSITISKRDCTTNLPTWLQNCK-EERSRIM 454
Query: 470 NNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTH 529
N +++ +RD+CKKWNS C+S H P E+ F S+SPSS TS S++++ + + H
Sbjct: 455 ENQENAKLRDICKKWNSFCSSAHGFPSNPEKQFFFISSSPSSPTSVSSHERKL-SLNLKH 513
Query: 530 RDWAVV-EPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQP--LSSNRNSTPNS 586
+W ++ EPKQ +E SD S E +L +++PE K++ +P LS+ +S ++
Sbjct: 514 LNWPLISEPKQVPKECELYTETTVSDDSY-EGNLIMFMPE-KNIPKPDLLSNPNSSPNSA 571
Query: 587 TSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKG 646
+SS + ++ FKE N ENL LC+AL KKV QK+ V +IA+TVL CRSG MR
Sbjct: 572 SSSEAVEGLDSTQIFKEHNDENLKILCDALLKKVSQQKEIVKEIASTVLLCRSG-MREGV 630
Query: 647 KFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTED 706
+ ++E W FF G+D+ AKE ++KELA++VFGS++NFVSI +SSFSST E+
Sbjct: 631 NHLVKRDDRQEIWFFFLGLDSQAKEMVSKELAKVVFGSYSNFVSIGISSFSSTH----EE 686
Query: 707 SRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSG 766
S+NKR RDE SY++RF EA++ NPHRVF +ED+EQ D+ S+KG K+ IESG I G
Sbjct: 687 SKNKRPRDEFGGSYLQRFGEALNENPHRVFFLEDLEQVDHFSKKGVKKGIESGTITLPGG 746
Query: 767 DEVSLGDAIVILSCESFSSRSRACSPP--TKQKSD-GCEEEKGAAMEGTSPSVSLDLNIC 823
+ V L DAIVI S ESFSS RACSP T SD E+ E +P +SLDLN+
Sbjct: 747 ESVPLKDAIVIFSSESFSSVPRACSPARTTSPFSDEDMEKNNINKSEEKTPCLSLDLNMA 806
Query: 824 IDDDSTEDQSIDD--IGLLESVDKRIIFKI 851
I+ D ++ +D +LE VDK+I FKI
Sbjct: 807 IEVDVQKNVHLDGDTAEILELVDKQINFKI 836
>gi|242073028|ref|XP_002446450.1| hypothetical protein SORBIDRAFT_06g016210 [Sorghum bicolor]
gi|241937633|gb|EES10778.1| hypothetical protein SORBIDRAFT_06g016210 [Sorghum bicolor]
Length = 874
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/913 (45%), Positives = 556/913 (60%), Gaps = 107/913 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ MLAA GLLR ACL+SH
Sbjct: 1 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAPAGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPAS---TSTPMLGGHCQF------PTISNALVAAFKRAQA 111
SHPLQCKALELCFNVALNRLPAS S+P+LGGH P++SNALVAAFKRAQA
Sbjct: 61 SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHHYYPPSLSNALVAAFKRAQA 120
Query: 112 HQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
HQRRGS+E+QQQP+LAVKIELEQL++SILDDPSVSRVMREAGFSSTQVK+NVEQAV
Sbjct: 121 HQRRGSVESQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQAV---- 176
Query: 172 CSQSTPV---------SSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENL 222
CS +T + N S + +Q A A + L R+EDV +++ L
Sbjct: 177 CSTTTTTAATAAAPGKNPNPSSSATTSPTAQEAKAINKLPLPLPLHQARDEDVAAILDCL 236
Query: 223 MSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP-EALRDVKCLPLSISSFRHMNRVEV 281
S+ KR VV+ E +++ E + +DKI++ + +ALR + + L +SSFR M R E
Sbjct: 237 ASRSKRRVVVIAESVSAAEAMAHAAVDKIKRAEAKHDALRGAQVVSLRVSSFRDMPREET 296
Query: 282 EQRVEEIKNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQ-VRGYYCSIEHIIMEIGKLVC 339
E+R+ E++ LVR + +VL + DL+W AEF A + RGYY S+EH++ E+ L+
Sbjct: 297 ERRLGELRCLVRGRRQQEVVLVVEDLKWAAEFWAGHVQSGRRGYYSSVEHVVTELRALLA 356
Query: 340 GIGENARF-----WLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITT--D 392
G WL+G T+Q+YMRC+ G PSLE+LW L LT+PAGSL LSL D
Sbjct: 357 SGGGGDHGGGSMCWLLGFGTYQAYMRCRVGQPSLESLWGLQTLTVPAGSLVLSLTCAFDD 416
Query: 393 SDLQSQSTSKKAESGVS-------WLLFEGEEENKQLTCCADCS-AKFEAEA---RSLQS 441
S L + + S KA S W L G + + CCADCS A+ + +A R S
Sbjct: 417 SALGTVNQSMKAGSDTDGNAPASCWPLLGGTQLISR--CCADCSAARIDTKAALPRPFVS 474
Query: 442 SSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERT 501
SS S+LP+WLQ ++ ++ T ++ + DL K W+SIC+ +P T
Sbjct: 475 SS-------STLPSWLQHCRDHQEPTTTH------LTDLGKTWSSICS----RPSSQRMT 517
Query: 502 LTFSS-ASPSSSTSGFSY--DQQYPNFHKTHRDWAVVEPKQSWREHHFLF--SHEASDKS 556
L FS+ SP+SS S + + D + + H W + + HH + EAS +
Sbjct: 518 LHFSAPVSPASSISSYEHGGDHHHQSQQPRHSSWLLAGLDAAAPAHHHPWRPKREASGGN 577
Query: 557 TSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNAL 616
+ +S + + S S ++ KFKEL++ENL LC AL
Sbjct: 578 KAA-----------------ASRSHDSGGSNGSVEVECRRAKAKFKELSAENLKVLCGAL 620
Query: 617 EKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKE 676
EK+VPWQK+ V +IA+ VL+CRSG +R+ K + ++ KEETW+FF G DAD KEK+A+E
Sbjct: 621 EKEVPWQKEIVPEIASAVLQCRSGIAKRRDKSRS-ADAKEETWMFFLGGDADGKEKVARE 679
Query: 677 LARLVFGSHNNFVSI-------ALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVS 729
LA LVFGS N+FVSI A S A S E R+KR R + +Y+ER EAVS
Sbjct: 680 LASLVFGSRNSFVSIRPGGGASASSPPPPAAASSEEHHRSKRPR--MAAAYLERLHEAVS 737
Query: 730 NNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESF--SSRS 787
NPHRV +EDVE+AD Q G K AIESG + +G+EV +GDAIVILSCESF SRS
Sbjct: 738 ENPHRVIFMEDVERADRDCQLGIKEAIESGVVRNHAGEEVGVGDAIVILSCESFDGDSRS 797
Query: 788 RACSPP----------TKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDI 837
R CSPP TK++ G E +SPS +DLN+ ++ D +++S+ D+
Sbjct: 798 RGCSPPSKKVKVEMEETKEERTGEHEHNEDGASSSSPSC-IDLNVDMESDPADERSLGDL 856
Query: 838 GLLESVDKRIIFK 850
LL +VD+ + F+
Sbjct: 857 CLLTAVDRTLFFR 869
>gi|357167553|ref|XP_003581219.1| PREDICTED: uncharacterized protein LOC100831510 [Brachypodium
distachyon]
Length = 839
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/895 (46%), Positives = 551/895 (61%), Gaps = 100/895 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAASVVKQA++LARRRG+AQVTPLHVA+ MLAA GLLR ACL+SH
Sbjct: 1 MRAGGCTVQQALTAEAASVVKQAVSLARRRGNAQVTPLHVASAMLAAPAGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF------------PTISNALVAAFKR 108
SHPLQCKALELCFNVALNRLPAS S P++SNALVAAFKR
Sbjct: 61 SHPLQCKALELCFNVALNRLPASASAVASSPLLLGGHGHSHGHHYYPPSLSNALVAAFKR 120
Query: 109 AQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS 168
AQAHQRRGS++ QQQP+LAVKIELEQL++SILDDPSVSRVMREAGFSSTQ+K+NVEQ V
Sbjct: 121 AQAHQRRGSVDTQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQIKANVEQTVC 180
Query: 169 LEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSL-DPIRNEDVMYVIENLMS--K 225
+ S P N + S+ + T +K ++ L R+EDV V++ L S +
Sbjct: 181 SSTAATSAPPRQNPNPSSSTATTTSKPQET--TKAKLPLPGQARDEDVAVVLDCLASSAR 238
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA--LRDVKCLPLSISSFRHMNRVEVEQ 283
KR VVV E S E VR V+DK++K D +A LR + + L +SSFR M R E E+
Sbjct: 239 SKRRVVVVAESTESAEATVRAVVDKVKKADQSDALPLRGAQVVSLRVSSFRDMPREEAER 298
Query: 284 RVEEIKNLVRSCLGRG--IVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIMEIGKLVCG 340
R+ E++ LV+S G G ++L + DL+W AEF A GYYC++EH++ E+ L CG
Sbjct: 299 RLSELRCLVKS-RGHGGHVLLVVEDLKWAAEFWAGRRP---GYYCAVEHVVTEVRALACG 354
Query: 341 IG--ENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAG-SLSLSLITT-----D 392
G ++A WL+G T+Q+Y +C++G PSLE+LW L LT+PAG SL+LSL T D
Sbjct: 355 GGGEQHALTWLVGFGTYQTYTKCRTGQPSLESLWGLQTLTVPAGCSLALSLTTCPAAFDD 414
Query: 393 SDLQSQSTSKKAES---GVS-WLLFEGEEENKQLTCCADCSAKFEAEARS-LQSSSCNSD 447
S L S + S KA S GV W L G + + CC DCSA AR+ +++ S
Sbjct: 415 SALGSVNQSMKASSDTDGVPRWPLSGGGQLISR--CCGDCSA-----ARTDTKAALPPSF 467
Query: 448 SPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSS- 506
+SS+P+WLQ +++ + + + + DL + W SIC ++ TL FS+
Sbjct: 468 LSSSSIPSWLQHCRDQ------HLQEPTHLMDLGRNWGSICGKPSQR-----MTLHFSAP 516
Query: 507 ASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
SP+SS S + + Q P+ SW H K +
Sbjct: 517 VSPASSISSYEHGHQ---------------PRHSWLLADLDCKHPWKPKREA-------- 553
Query: 567 PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDT 626
D+++ LS +S +S+ +E+E +FKELN+ENL LC ALEK+VPWQK+
Sbjct: 554 ----DVEKVLSH------DSGASNGSVEVECRSRFKELNAENLKVLCVALEKEVPWQKEI 603
Query: 627 VYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHN 686
+IA+TVL+CRSG +R+ K + ++ KEETW+FF G D D KEK+A+ELA LVFGSH
Sbjct: 604 APEIASTVLQCRSGISKRRDKSRS-TDAKEETWMFFLGGDVDGKEKVARELANLVFGSHK 662
Query: 687 NFVSIALSSFSSTRAD-STEDSRNKRSRDEQSCS--YIERFAEAVSNNPHRVFLIEDVEQ 743
NF+SI + SS A STE+ R+KR R + + +E+ EA++ NPHRV ++ED+EQ
Sbjct: 663 NFMSIKPAGASSPSASCSTEEHRSKRPRTSAAATGACLEQLYEAINENPHRVIILEDIEQ 722
Query: 744 ADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEE 803
AD SQ K AI++G + + + DEV LGDAIVIL CESF ++SR CSPP+KQ +E
Sbjct: 723 ADQYSQVAIKEAIDTGVVRSQASDEVGLGDAIVILCCESFDAKSRTCSPPSKQIMAEPKE 782
Query: 804 EKGAAME----GTSPSVSLDLNICIDDDSTEDQS-IDDIGLLESVDKRIIFKIME 853
E + E G S S DLN I+ + + +S D+ LL +VD+ + F+ E
Sbjct: 783 EHTSDNEHKEVGASSSSGFDLNRDIESEHADHESNPSDVCLLTAVDRTLFFRTQE 837
>gi|413918279|gb|AFW58211.1| hypothetical protein ZEAMMB73_670982 [Zea mays]
Length = 862
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 414/905 (45%), Positives = 552/905 (60%), Gaps = 102/905 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ MLAA TGLLR ACL+SH
Sbjct: 1 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAPTGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPAS---TSTPMLGGHCQF-------PTISNALVAAFKRAQ 110
SHPLQCKALELCFNVALNRLPAS S+P+LGGH P++SNALVAAFKRAQ
Sbjct: 61 SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHHHHHHYYPPSLSNALVAAFKRAQ 120
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
AHQRRGS+E+QQQP+LAVKIELEQL++SILDDPSVSRVMREAGFSSTQVK+NVEQAV
Sbjct: 121 AHQRRGSVESQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQAVCSS 180
Query: 171 ICSQSTPV-----SSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
+ ST S N + S+ S A K +K + L R+EDV V++ L S+
Sbjct: 181 TTTTSTAAAATAPSKNPNPSSSAATASPPQEAAKGNK--LPLHQARDEDVAAVLDCLASR 238
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVP-EALRDVKCLPLSISSFRHMNRVEVEQR 284
KR VV+ E A+ E +DKI+ + +ALR + + + +SSFR M R E E+R
Sbjct: 239 SKRRVVVIAESAAAAEATAHAAMDKIKSAEAKHDALRGAQVVSVRVSSFREMAREETERR 298
Query: 285 VEEIKNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQV--RG-YYCSIEHIIMEIGKLVCG 340
+ E++ LVR G+ +VL + DL+W AEF A Q RG YYCS+EH++ E+ L G
Sbjct: 299 LGELRCLVRGRRGQVVVLVVEDLKWAAEFWAGHVVQSGRRGYYYCSVEHVVTELRALASG 358
Query: 341 IGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL--ITTDSDLQSQ 398
G + WL+G T+Q+Y RC+ G PSLE+LW L LT+PAGSL+LSL DS L
Sbjct: 359 -GGGSLCWLLGFGTYQAYTRCRVGQPSLESLWELQTLTVPAGSLALSLNCAFDDSALGLG 417
Query: 399 STSKKAESGVS----------WLLFEGEEENKQLTCCADCS-AKFEAEARSLQSSSCNSD 447
+ ++ ++G S W L G + + C DCS A+ E +L + S
Sbjct: 418 TVNQSMKAGSSDTDGNGPASCWPLLAGSKLISR-CCGGDCSAARIETTKAALPRTPFVS- 475
Query: 448 SPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSS- 506
+SSLP+WLQ ++ ++ D DL K W+SIC+S + TL FS+
Sbjct: 476 --SSSLPSWLQHCRDHQEPATHLTD------DLGKTWSSICSSSRPSQRTT--TLHFSAP 525
Query: 507 ASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
SP+SS S + H +P+ SW +H + E S+R +
Sbjct: 526 VSPASSISSYE-----------HGGGQSQQPRHSWLLAGLDAAHHPW-RPKREASIRSH- 572
Query: 567 PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDT 626
+S +S+ +E+E +FKELN+ENL LC ALEK+VPWQK+
Sbjct: 573 ------------------DSGASNGSVEVECRARFKELNAENLKLLCGALEKEVPWQKEI 614
Query: 627 VYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHN 686
V ++A+ VL+CRSG +R+ K + ++ KEETW+ F G DAD KE++A+ELARLVFG +
Sbjct: 615 VPEVASAVLQCRSGIAKRRDKSRS-ADAKEETWMLFLGGDADGKERVARELARLVFGLRS 673
Query: 687 NFVSI------ALSSFSSTRADSTEDSR-NKRSR---DEQSCSYIERFAEAVSNNPHRVF 736
+F+SI + SS + S+E R +KR R +E + Y+ER EAVS NPHRV
Sbjct: 674 SFLSIRPGGVVSASSPPPASSGSSEGHRSSKRPRMPEEEPAAYYLERLHEAVSENPHRVI 733
Query: 737 LIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESF--SSRSRACSPPT 794
+EDVE+AD Q K AIESG + +G EV +GDAIVILSCESF S SRACSPP+
Sbjct: 734 FMEDVERADRDCQLRIKEAIESGVVRNHAGQEVGVGDAIVILSCESFGDSRSSRACSPPS 793
Query: 795 KQ---KSDGCEEEKGAAMEGTSPSVS------LDLNICIDDDSTEDQSIDDIGLLESVDK 845
K+ + + +EE+ E VS +DLN+ ++ D ++ S+ D LL +VD+
Sbjct: 794 KKVKVEMEEAKEERAGDHEHNQDGVSKPSPSCIDLNVDMESDQADEPSLGDQCLLTAVDR 853
Query: 846 RIIFK 850
+ F+
Sbjct: 854 ALFFR 858
>gi|116310805|emb|CAH67595.1| OSIGBa0092M08.7 [Oryza sativa Indica Group]
gi|218194827|gb|EEC77254.1| hypothetical protein OsI_15844 [Oryza sativa Indica Group]
Length = 876
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 406/916 (44%), Positives = 551/916 (60%), Gaps = 111/916 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA+VVKQA+TLARRRG+AQVTPLHVA+ MLA GLLR ACL+SH
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPAS---TSTPMLGGHCQF-------PTISNALVAAFKRAQ 110
SHPLQCKALELCFNVALNRLPAS S+P+LGGH P++SNALVAAFKRAQ
Sbjct: 61 SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHGHYYPPSLSNALVAAFKRAQ 120
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
AHQRRGS+E QQQP+LAVKIELEQL++SILDDPSVSRVMREAGFSSTQVK+NVEQA S
Sbjct: 121 AHQRRGSVETQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQACSTT 180
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS-----LDPI-RNEDVMYVIENL-- 222
+ S P + N + + TA+ + P + LD + R+ED+ V++ L
Sbjct: 181 TAT-SAPPNQNPNPSCTGAAATATATTSPAHPPEIKAKLPLLDMLARDEDIAAVLDCLAP 239
Query: 223 -------MSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPE--ALRDVKCLPLSISSF 273
+R VVV E A+ E R +D++ +G+ + ALR + + L +SSF
Sbjct: 240 AAAGGRGGGGSRRRVVVVAESTAAAEATARAAVDRVRRGEAKQHDALRGAQVVNLRVSSF 299
Query: 274 RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQVR-------GYYC 325
R M R E E+R+ E++ LV+S G ++L + DL+W A+F A++ R GYYC
Sbjct: 300 RDMPREEAERRLAELRCLVKS-RGARVLLVVEDLKWAADFWAAAHTGARRVGSGGGGYYC 358
Query: 326 SIEHIIMEIGKLV-CGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSL 384
S+EH++ E+ L C G WL+G T+Q+YM+C++GHPSLE++W L L +PAGSL
Sbjct: 359 SVEHVVTEVRALASCDGG----IWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPAGSL 414
Query: 385 SLSLITT--DSDLQSQSTSKKAESGVS---------WLLFEGEEENKQLTCCADCSAKFE 433
+LSL DS L + + S KA + W L G + C DCSA
Sbjct: 415 ALSLTCAFDDSALGAVNQSMKASPHTTDGNRPAPSCWPLLGGSHLLSR-CCGGDCSAATT 473
Query: 434 AEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHK 493
++S S +SSLP+WLQ ++++ + + DL K W SIC +
Sbjct: 474 THEHDTKASLPRSFVSSSSLPSWLQHCRDQQL------QESTHFADLGKTWGSICGKPSQ 527
Query: 494 QPYYSERTLTFSS-ASPSSSTSGF-SYDQQYPNFHKTHRDW--AVVEPKQSWREHHFLFS 549
+ TL FS+ SP+SS S + H+ H W A ++ K W+
Sbjct: 528 R-----MTLHFSAPVSPASSISSYEHGHGHQQQQHQPHHSWLLADLDAKHPWK------- 575
Query: 550 HEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENL 609
P+ +D + + + +++ S +E+E +FKELN+ENL
Sbjct: 576 -----------------PKREDDDDEKAKSHDDCSGASNGS--VEVECRSRFKELNAENL 616
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
LC ALEK+VPWQK+ V ++A+ VL+CRSG +R+ + + +E KEETWLFF G DA
Sbjct: 617 KLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRS-TEAKEETWLFFLGGDAHG 675
Query: 670 KEKIAKELARLVFGSHNNFVSIAL--SSFSSTRADSTED-SRNKR----SRDEQSCSYIE 722
KE++A+ELA LVFGS +F+S+ L SS S + + STED R+KR +R S +Y+E
Sbjct: 676 KERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTRSSASEAYLE 735
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
R +AVS NPHRV LIEDVEQ D+ Q G K AI+ G + + +GDEV +GDAI+ILSCES
Sbjct: 736 RLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDAIIILSCES 795
Query: 783 FSSRSRACSPPTKQKSDGCEEEKGAA-------MEGTSPSVSLDLNICIDDDSTEDQ-SI 834
F +RSRA SP +K +EE + +E PS DLN+ ++ D D+ S
Sbjct: 796 FEARSRAGSPLMNKKMKVEKEEANTSDHDHKLEIESGVPSSCFDLNLDMESDQAADELSS 855
Query: 835 DDIGLLESVDKRIIFK 850
D+ LL +VD+ ++F+
Sbjct: 856 GDVCLLTAVDRVLLFR 871
>gi|414587306|tpg|DAA37877.1| TPA: hypothetical protein ZEAMMB73_032476 [Zea mays]
Length = 928
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 409/911 (44%), Positives = 558/911 (61%), Gaps = 110/911 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG--LLRTACLQ 58
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ MLAA+ LLR ACL+
Sbjct: 64 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAAPAGQLLRAACLR 123
Query: 59 SHSHPLQCKALELCFNVALNRLPASTSTPMLGG--HCQF-PTISNALVAAFKRAQAHQRR 115
SHSHPLQCKALELCFNVALNRLPAS S+P+LGG HC P++SNALVAAFKRAQAHQRR
Sbjct: 124 SHSHPLQCKALELCFNVALNRLPASASSPLLGGNHHCYHPPSLSNALVAAFKRAQAHQRR 183
Query: 116 -GSIENQ-QQPLL-AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAV--SLE 170
GS+E+Q QQP++ AVKIEL+QL++SILDDPSVSRVMR+AGFSSTQVK+NVEQAV S
Sbjct: 184 GGSVESQHQQPVVAAVKIELDQLVVSILDDPSVSRVMRDAGFSSTQVKANVEQAVCSSST 243
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNF 230
+ + + S N + S+ S K P R+EDV V++ L S+ KR
Sbjct: 244 MATAAAAPSKNPNPSSSATTTSPPPKEAKAKPPLALHHQARDEDVAAVLDCLASRSKRRV 303
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVP---EALRDVKCLPLSISSFRHMNRVEVEQRVEE 287
VV+ E A+ E + +DKI++G+V +ALR + + L +SSFR M R E E+R+ E
Sbjct: 304 VVIAESAAAAEAMAHAAVDKIKRGEVKHEHDALRGAQVVSLRVSSFREMPREEAERRLGE 363
Query: 288 IKNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQV--RG--YYCSIEHIIMEIGKLVCGIG 342
++ LV+ + +VL + DL+W AEF A Q RG YYC++EH++ E+ L G
Sbjct: 364 LRCLVKQGRRQRVVLVVEDLKWAAEFWAGHDGQSGRRGGYYYCAVEHVVNELRALASG-- 421
Query: 343 ENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITT--DSDLQSQST 400
+ WL+G T+Q+Y +C+ G PSLE+LW L LT+PAGSL+LSL DS L + +
Sbjct: 422 -GSLCWLLGFGTYQAYTKCRVGQPSLESLWGLQTLTVPAGSLALSLTCAFDDSALGTVNQ 480
Query: 401 SKKAESGVS-------WLLFEGEEENKQLTCC--ADCSAKFEAEARSLQSSSCNSDSPTS 451
S KA S W L G + + CC DCSA +L S +S S
Sbjct: 481 SLKAGSDADGNGPASCWPLLGGSQLSLSSRCCGDGDCSAARIDTKAALPRPSVSS----S 536
Query: 452 SLPAWLQQYKNEKKATLSNNDKDSGVRDLCKK--WNSICNSIHKQPYYSERTLTFSS-AS 508
+LP+WLQ ++ ++ T S+ + DL K W+SIC+ ++ TL FS+ S
Sbjct: 537 NLPSWLQHCRDHQEPTTSH------LTDLSKSKTWSSICSRPSQR-----MTLHFSAPVS 585
Query: 509 PSSSTSGFSY--DQ--QYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRL 564
P+SS S + + DQ Q P P+ SW L + + EP
Sbjct: 586 PASSISSYEHGGDQSSQTP-------------PQHSW-----LLAGLDAAHHRWEP---- 623
Query: 565 YIPEHKDLKQPLSSNR---NSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVP 621
K+ S N+ S + S+ +E+E +FKEL++ENL LC ALEK+VP
Sbjct: 624 --------KRETSGNKAASRSHDSGASNGGSVEVECRARFKELSAENLKLLCGALEKEVP 675
Query: 622 WQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLV 681
WQK+ + ++A+ VL+CRSG +R+ K + ++ KEETW+ F G DAD KE++A+ELA LV
Sbjct: 676 WQKEIIPEVASAVLQCRSGIAKRRDKSRS-ADAKEETWMLFLGGDADGKERVARELASLV 734
Query: 682 FGSHNNFVSI--ALSSFSSTRADSTEDSR-NKRSR-------DEQSCSYIERFAEAVSNN 731
FGS ++F++I SS S R+ S+E R NKR R +E + + +ER +AVS N
Sbjct: 735 FGSRDSFLAIRPGASSSSPPRSGSSEGHRSNKRPRMSPPPPGEESAPACLERLHDAVSEN 794
Query: 732 PHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSS--RSRA 789
PHRV +E VEQA Q G K AIESG + +G EV +GDAIV+LSCE F S RSRA
Sbjct: 795 PHRVIFMEGVEQAGRDCQLGIKEAIESGVVRNRAGVEVGVGDAIVVLSCEGFGSTGRSRA 854
Query: 790 CSPPTKQ---KSDGCEEEKGAAMEGTSPSVS------LDLNICIDDDSTEDQSI-DDIGL 839
CSPP+K+ + + +EE+ +E S +DLN+ ++ D ++ S+ DD+ L
Sbjct: 855 CSPPSKKVKVEMEEAKEERTGDIEHNGDGGSSSSPSCIDLNVDMESDQADEGSLDDDVCL 914
Query: 840 LESVDKRIIFK 850
L +VD+ + F+
Sbjct: 915 LTAVDRTLFFR 925
>gi|38344035|emb|CAE01527.2| OJ991214_12.16 [Oryza sativa Japonica Group]
gi|39545713|emb|CAD40931.3| OSJNBa0033G16.3 [Oryza sativa Japonica Group]
Length = 877
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 403/916 (43%), Positives = 543/916 (59%), Gaps = 110/916 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA+VVKQA+TLARRRG+AQVTPLHVA+ MLA GLLR ACL+SH
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPAS---TSTPMLGGHCQF-------PTISNALVAAFKRAQ 110
SHPLQCKALELCFNVALNRLPAS S+P+LGGH P++SNALVAAFKRAQ
Sbjct: 61 SHPLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHGHYYPPSLSNALVAAFKRAQ 120
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
AHQRRGS+E QQQP+LAVKIELEQL++SILDDPSVSRVMREAGFSSTQVK+NVEQA S
Sbjct: 121 AHQRRGSVETQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVKANVEQACSTT 180
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS-----LDPI-RNEDVMYVIENL-- 222
+ S P + N + + TA+ + P + LD + R+ED+ V++ L
Sbjct: 181 TAT-SAPPNQNPNPSCTGAAATATATTSPAHPPEIKAKLPLLDMLARDEDIAAVLDCLAP 239
Query: 223 -------MSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPE--ALRDVKCLPLSISSF 273
+R VVV E A+ E R +D++ +G+ + ALR + + L +SSF
Sbjct: 240 AAAGGRGGGGSRRRVVVVAESTAAAEATARAAVDRVRRGEAKQHDALRGAQVVSLRVSSF 299
Query: 274 RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEF---------RASSSEQVRGYY 324
R M R E E+R+ E++ LV+S G ++L + DL+WA R S GYY
Sbjct: 300 RDMPREEAERRLAELRCLVKS-RGARVLLVVEDLKWAADFWAAAHAGARRVGSGGGGGYY 358
Query: 325 CSIEHIIMEIGKLV-CGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGS 383
CS+EH++ E+ L C G WL+G T+Q+YM+C++GHPSLE++W L L +PAGS
Sbjct: 359 CSVEHVVTEVRALASCDGG----IWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPAGS 414
Query: 384 LSLSLITT--DSDLQSQSTSKKA--------ESGVSWLLFEGEEENKQLTCCADCSAKFE 433
L+LSL DS L + + S KA S G C DCSA
Sbjct: 415 LALSLTCAFDDSALGAVNQSMKASPHTTDGNRPAPSCGPLLGGSHLLSRCCGGDCSAATT 474
Query: 434 AEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHK 493
++S S +SSLP+WLQ ++++ + + DL K W SIC +
Sbjct: 475 THEHDTKASLPRSFVSSSSLPSWLQHCRDQQL------QESTHFADLGKTWGSICGKPSQ 528
Query: 494 QPYYSERTLTFSS-ASPSSSTSGF-SYDQQYPNFHKTHRDW--AVVEPKQSWREHHFLFS 549
+ TL FS+ SP+SS S + H+ H W A ++ K W+
Sbjct: 529 R-----MTLHFSAPVSPASSISSYEHGHGHQQQQHQPHHSWLLADLDAKHPWK------- 576
Query: 550 HEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENL 609
P+ +D + + + +++ S +E+E +FKELN+ENL
Sbjct: 577 -----------------PKREDDDDEKAKSHDDCSGASNGS--VEVECRSRFKELNAENL 617
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
LC ALEK+VPWQK+ V ++A+ VL+CRSG +R+ + + +E KEETWLFF G D
Sbjct: 618 KLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRS-TEAKEETWLFFLGGDGHG 676
Query: 670 KEKIAKELARLVFGSHNNFVSIAL--SSFSSTRADSTED-SRNKRSRDEQSCS----YIE 722
KE++A+ELA LVFGS +F+S+ L SS S + + STED R+KR R + S Y+E
Sbjct: 677 KERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTTSSASEAYLE 736
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
R +AVS NPHRV LIEDVEQ D+ Q G K AI+ G + + +GDEV +GDAI+ILSCES
Sbjct: 737 RLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDAIIILSCES 796
Query: 783 FSSRSRACSPPTKQKSDGCEEEKGAA-------MEGTSPSVSLDLNICIDDDSTEDQ-SI 834
F +RSRA SP +K +EE + +E +PS DLN+ ++ D D+ S
Sbjct: 797 FEARSRAGSPLMNKKMKVEKEEANTSDHDHKLEIESGAPSSCFDLNLDMESDQAADELSS 856
Query: 835 DDIGLLESVDKRIIFK 850
D+ LL +VD+ ++F+
Sbjct: 857 GDVCLLTAVDRVLLFR 872
>gi|242061870|ref|XP_002452224.1| hypothetical protein SORBIDRAFT_04g022000 [Sorghum bicolor]
gi|241932055|gb|EES05200.1| hypothetical protein SORBIDRAFT_04g022000 [Sorghum bicolor]
Length = 880
Score = 587 bits (1513), Expect = e-164, Method: Compositional matrix adjust.
Identities = 392/914 (42%), Positives = 539/914 (58%), Gaps = 105/914 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-----AASTG----- 50
MRAGGCT+QQ L EAA+VVKQA++LARRRG+AQVTPLHVA+ ML AA+TG
Sbjct: 1 MRAGGCTVQQALAPEAAAVVKQAVSLARRRGNAQVTPLHVASAMLHQQVVAAATGTGTGP 60
Query: 51 -------LLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF---PTISN 100
LLR ACLQSHSHPLQCKALELCFNVALNRLPAS S P+LGGH P++SN
Sbjct: 61 SSSTAAGLLRAACLQSHSHPLQCKALELCFNVALNRLPASAS-PLLGGHGHVYYPPSLSN 119
Query: 101 ALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVK 160
ALVAAFKRAQAHQRRGS++ QQQP+LAVKIELEQL+ISILDDPSVSRVMREAGFSSTQVK
Sbjct: 120 ALVAAFKRAQAHQRRGSVDTQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSTQVK 179
Query: 161 SNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV--SLDPIRNEDVMYV 218
+NVEQAVS + S ++ + N + T SK ++ LD +R+EDV V
Sbjct: 180 ANVEQAVSSIEANNSASTNTAAAAHQNPNPRAAPHEETMPSKLQLPLDLDQVRDEDVAVV 239
Query: 219 IENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNR 278
++ L S+ K+ +VV EC A+ E R ++KI++G EALR + + L +S FR + R
Sbjct: 240 LDCLASRSKKRVMVVAECAATAEAPTRAAVEKIKRG---EALRGAQVVSLRVSRFRDLPR 296
Query: 279 VEVEQRVEEIKNLVRSCLGR--GIVLNLGDLEWA-EFRASSSEQVRG-------YYCSIE 328
E E+ + E++ V+ GR G+VL + DL WA EF A+ +E R YYC++E
Sbjct: 297 DEAERLLVELRCAVK-VGGRAGGVVLVVEDLGWAAEFWAARAESGRARWPSSCCYYCAVE 355
Query: 329 HIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL 388
H + E+ L C G+ WL+G T+QSYMRC++G PSLETLW L L +PAGSL+LSL
Sbjct: 356 HAVAEVRALACRGGDG--VWLIGYGTYQSYMRCRAGQPSLETLWGLQTLAVPAGSLALSL 413
Query: 389 -ITTDS------------DLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAE 435
DS D + A +S L G + LT + F A+
Sbjct: 414 NFVGDSATAMTINHLAKCDDDRSGNNGSAPRCLSLLDAGG---SGHLTAVS----SFFAD 466
Query: 436 ARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQP 495
S ++ C + SS+P WLQ +++ + CKK ++ S+
Sbjct: 467 DCSATATKCEP-ALKSSIPPWLQHCRDQDPSR-------------CKKSSTCGGSLS--- 509
Query: 496 YYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDK 555
++ L FS+A S S+S SY+Q Y +++ W VV +H ++
Sbjct: 510 HHHRTALNFSTAVVSPSSSVSSYEQHYHLHQPSYQPWVVVADAHE-------DNHPSNKA 562
Query: 556 STSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNA 615
+ +++L++ + +D+K LS+ + +S+S+ +E +FKEL++ENL LC+A
Sbjct: 563 RCAAAAVQLHVVDDEDVKL-LSAAIKVKSDDSSASNNSSVECRSRFKELSAENLKVLCSA 621
Query: 616 LEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE----VKEETWLFFQGVDADAKE 671
LEK+VPWQ + V +IA+TVL+CRSG RR+ S KE+TW+ F G DAD K
Sbjct: 622 LEKEVPWQAEIVPEIASTVLQCRSGMARRRDAAASSSRPPAFAKEDTWMLFHGGDADGKV 681
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSST---RADSTEDSRNKRSR-----DEQSCSYIER 723
++A+ELARLVFGS +FVSIA S +++ R+D + + KR R + C E
Sbjct: 682 RVARELARLVFGSRKSFVSIAGSGTTASSPARSDDSSKQQRKRPRLMEEASDHGCH--ES 739
Query: 724 FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVT-SSGDEVSLGDAIVILSCES 782
EAV +NPHRV L++DVEQ + Q+ AI+ G + + + GDE +LGDAIV+LSC+S
Sbjct: 740 LYEAVRDNPHRVILVQDVEQGGWRCQRDILEAIQRGLVRSHAGGDEAALGDAIVVLSCQS 799
Query: 783 FSSRSRACSPPTKQK------SDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDD 836
F + S SPPT K + E+ AA S S DLN+ +++D + D
Sbjct: 800 FDAWSTTSSPPTTTKKAKTESEEEPTGEESAAAASPSSSPCFDLNMDVENDDLLESCFTD 859
Query: 837 IGLLESVDKRIIFK 850
LL++VD+ F+
Sbjct: 860 ASLLKAVDRTFFFR 873
>gi|296084461|emb|CBI25020.3| unnamed protein product [Vitis vinifera]
Length = 781
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/662 (50%), Positives = 451/662 (68%), Gaps = 26/662 (3%)
Query: 207 LDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
D + EDV +++ SKR+RN VVVGE LAS EGVVRG+++K E+GDVP LR V+ +
Sbjct: 132 FDEAQEEDVKSLLDAFTSKRRRNTVVVGETLASAEGVVRGLMNKFERGDVPGDLRYVQFI 191
Query: 267 PLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQVRGYYC 325
L + S +++++ EVEQ++ ++ L++S + RG+VL LGDL+W +EF ++ E+ R Y
Sbjct: 192 SLPLFSLKNLSKEEVEQKLVKLTCLLKSYVCRGVVLYLGDLKWVSEFESNYGER-RNYCS 250
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLS 385
+EHIIME+G+++CGIG+ R WL+G ATFQ+YMRCK+GHPSLET+W LHPLTIP GSL
Sbjct: 251 PVEHIIMELGRMMCGIGDRGRMWLLGTATFQTYMRCKAGHPSLETIWELHPLTIPVGSLG 310
Query: 386 LSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCN 445
L L DS+LQ + SK + G SW L + + K LTC +CS F+ E++S+ S N
Sbjct: 311 LGL-NLDSNLQGRFQSKASGDGTSWSLLQSGD--KHLTCSTNCSDNFDKESQSIACSFRN 367
Query: 446 SD-------SPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYS 498
+ S +SSLP+WLQ+ EK+ + ++ + VRDLC KWNS C+S+HK+ + +
Sbjct: 368 GESTTTITTSTSSSLPSWLQK---EKRRKIMDDQECVQVRDLCNKWNSFCSSVHKKAHST 424
Query: 499 ERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDW-AVVEPKQSWREHHFLFSHEASDKST 557
E+ L FSS S SSTS SYDQ PN + H W A++EPK +EH F S +
Sbjct: 425 EKALNFSSPS-PSSTSISSYDQCSPNLQQNHLSWPAIIEPKPPLKEHQFWISENVDE--G 481
Query: 558 SEPSLRLYIPEHKDLKQP--LSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNA 615
EP ++I E ++ P LS+ +S +++SS I + E ++ FKELN+ENL LCNA
Sbjct: 482 LEPKFSMHIAE-RNFPIPDLLSNPNSSPNSASSSEAIEDGEGLYGFKELNAENLRILCNA 540
Query: 616 LEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAK 675
LE++VPWQKD + +IA+T+L+CRSGT+R K K K E KEETWL F GVD K+KIA+
Sbjct: 541 LERRVPWQKDIIPEIASTILECRSGTLRGKNKLK-QREDKEETWLLFLGVDFQGKDKIAR 599
Query: 676 ELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRV 735
E+A+LVFGS + F+SI LSS STRADSTED +K++RDE SYIE+FAEAV NPHRV
Sbjct: 600 EIAKLVFGSQSKFISIGLSSLGSTRADSTEDFLSKQARDEPVGSYIEKFAEAVHENPHRV 659
Query: 736 FLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTK 795
F IEDVEQ DY SQ G KR IESGRI + G+ SL DAI+I SCESFSS SRA SPP
Sbjct: 660 FFIEDVEQLDYSSQMGVKRGIESGRIQIAGGEAFSLEDAIIIFSCESFSSVSRASSPPPM 719
Query: 796 --QKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQ-SIDDIGLLESVDKRIIFKIM 852
+ + E+++ +E SP VSLDLN+ +D+ Q S+ D G+L+SVD++ IFKI
Sbjct: 720 GLKSEENEEKDRDNELEKRSPCVSLDLNLSAEDNQEYGQNSVADTGVLDSVDRQFIFKIQ 779
Query: 853 EL 854
EL
Sbjct: 780 EL 781
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 94/102 (92%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG C++QQ LTA+AAS+VKQA+TLARRRGHAQVTPLHVA+ MLA+S+GLLR+ACL+SH
Sbjct: 1 MRAGVCSVQQVLTADAASMVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNAL 102
SHPLQCKALELCFNVALNRLPAS+S+P+L H P++SNAL
Sbjct: 61 SHPLQCKALELCFNVALNRLPASSSSPLLAPHSSHPSLSNAL 102
>gi|357142495|ref|XP_003572591.1| PREDICTED: uncharacterized protein LOC100844688 [Brachypodium
distachyon]
Length = 841
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 382/900 (42%), Positives = 527/900 (58%), Gaps = 108/900 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG CT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ ML ASTGLLR ACL+SH
Sbjct: 1 MRAGVCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLHASTGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGS-- 117
SHPLQCKALELCFNVALNRLPA + L GH + P++SNALVAAFKRAQAHQRRG
Sbjct: 61 SHPLQCKALELCFNVALNRLPAGSP---LHGHVYYPPSLSNALVAAFKRAQAHQRRGGSV 117
Query: 118 -IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAV--SLEICSQ 174
QQQP+LAVKIELEQL+ISILDDPSVSRVMREAGFSS QVK+NVE AV S+E
Sbjct: 118 DTNQQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSPQVKANVEHAVVSSIEGTKG 177
Query: 175 STPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKR-KRNFVVV 233
T + + S ++ A K+ ++ +R EDV +++ L S R KR +VV
Sbjct: 178 LTNPNPSSSSSPPTEFENKPAGIGKLP----VVEQVREEDVAAILDCLASGRSKRRVMVV 233
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLV- 292
E ++ E +D+I++ P + + +S+S FR R + E+R+ E++ V
Sbjct: 234 AESSSAAEAAAMAAVDRIKEKAAPP-----RVISISVSMFRDALREDAERRLGELRRAVA 288
Query: 293 ---RSCLG--RGIVLNLGDLEW-AEFRAS-----SSEQVRGYYCSIEHIIMEIGKLVCGI 341
++ G RG+VL + DL W AEF A S+ YYC++EH + E+ L C
Sbjct: 289 RDSKAAAGGSRGVVLVVEDLRWAAEFWAGRVGRRSASSSCYYYCAVEHAVGEVRALACR- 347
Query: 342 GENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTS 401
GE WL+ ++Q+YMRC++G+PSLE+LW + PL IP+GSL+LSL + D D +
Sbjct: 348 GEGDGVWLVAYGSYQAYMRCRAGNPSLESLWGIQPLAIPSGSLALSLSSADVDSAIALSH 407
Query: 402 KKAESGVSWLLFE----GEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSS--LPA 455
+++ S L + G+ +CC DCSA +++S+S S P+SS +P
Sbjct: 408 RQSTSPACLSLLDASCSGQPMAAVSSCCGDCSA---TNPDAMRSASHRSIVPSSSTNIPP 464
Query: 456 WLQQYKNEKKATLSNNDKDSGVRDLCKKWNS-ICNSIHKQPYYSERTLTFSSASPSSSTS 514
WL+ ++++ CK W+S C S+RT + ++ S +S
Sbjct: 465 WLRHCRDQELPP-------------CKNWSSTTCGG-----SASQRTTQLNFSTAVSPSS 506
Query: 515 GFSYDQQYPNFHKTHRDWAVV---EP-KQSWREHHFLFSHEASDKSTSEPSLRLYIPEHK 570
S +QY N H+ ++ W V EP K SWR F + D++
Sbjct: 507 SVSSYEQYYNMHQPYQPWIVADVHEPSKHSWRA-KCSFDNVLMDEA-------------- 551
Query: 571 DLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDI 630
S +R+S+ ++ S ++ FKE+++ENL LC ALEK+VPWQK+ V +I
Sbjct: 552 ------SKSRDSSASNGGSVEVGCRS--RSFKEVSAENLKVLCGALEKEVPWQKEIVPEI 603
Query: 631 ANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVS 690
A+TVL+CRSG +R+ K KEETW+ F G D D K ++A+ELA LVFGS +FVS
Sbjct: 604 ASTVLRCRSGMAKRRDAMK----AKEETWMLFLGGDTDGKLRVARELAGLVFGSRKSFVS 659
Query: 691 IALSSFSSTRADSTEDSRNKRSRDEQS-CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQ 749
I + S R+DS + ++ S+ +S S++ER EAV +NPHRV L+E VE+ D Q
Sbjct: 660 IDADACSPARSDSFVEQKHHGSKRHRSEASHLERLFEAVRDNPHRVILMEGVERVDRRCQ 719
Query: 750 KGFKRAIESGRIVTSSGDE---------VSLGDAIVILSCESFSSRSRACSPPT---KQK 797
G K AIESG + S SLGDAIV+L C+SF SRSRACSPPT K K
Sbjct: 720 MGIKEAIESGVVRRSHSGAGAGADDDDVASLGDAIVVLCCDSFDSRSRACSPPTMSKKAK 779
Query: 798 SDGCEEEKGAAMEGTSPSVSLDLNICIDDDS----TEDQSIDDIGLLESVDKRIIFKIME 853
+ +++K + DLN+ +D+D E S D GL+++VD+ + F+ E
Sbjct: 780 AKSDDDDKSNDRHDNEAASCFDLNMSVDEDQEVVVDEYCSFGDAGLIKAVDRTLFFRTPE 839
>gi|413924951|gb|AFW64883.1| hypothetical protein ZEAMMB73_688581 [Zea mays]
Length = 838
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 356/897 (39%), Positives = 510/897 (56%), Gaps = 105/897 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGC +QQ L AEAA+VV+QA+ LARRRGHAQVTPLHVA+ ML+A+ GLLR ACL+SH
Sbjct: 1 MRAGGCAVQQALAAEAAAVVRQAVALARRRGHAQVTPLHVASAMLSAA-GLLRAACLRSH 59
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPML----GGHCQFPTISNALVAAFKRAQAHQRRG 116
SHPLQCKALELCFNVALNRLP + ++ G P +SNALVAAFKRAQAHQRRG
Sbjct: 60 SHPLQCKALELCFNVALNRLPTAAASMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRG 119
Query: 117 SIENQQ----QPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEIC 172
S++ Q QP+LA K++++QLIISILDDPSVSRVMREAGFSS+QVK+NVE+AVS
Sbjct: 120 SVDGAQGQPPQPVLAGKVDIDQLIISILDDPSVSRVMREAGFSSSQVKANVEKAVSAS-- 177
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVV 232
SS + ++ N T T + +S + D M V++ + S KR+ VV
Sbjct: 178 ------SSPEHQQQNT-----TIPPTSRAHAAISPGGAASGDAMRVLDCMASGSKRSVVV 226
Query: 233 VGECLASIEGVVRGVIDKIEKGDVP---EALRDVKCLPLSISSFRHMNRVEVEQRVEEIK 289
VGE A+ E VV+ V++++ KG++ E L++V+ +PLS +SF+ M R EVE + +++
Sbjct: 227 VGESAATAEVVVKAVMNRVSKGELQQRHERLKNVQFVPLSAASFQRMPREEVEAKAADLR 286
Query: 290 NLVRS--CLGRGIVLNLGDLEWAEFRASS-------------SEQVRGYYCSIEHIIMEI 334
LVR G+G+VL L DL +A ++ + +G YC +EH +ME+
Sbjct: 287 ALVRQGCAAGKGVVLVLEDLAYAAEAWAAVSETRRRSSGSGGRDHGQGCYCPVEHAVMEV 346
Query: 335 GKLVCGIGENA-----RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLI 389
G LV RFWL+G Q+Y++ ++G PSLE +W LHP+ +P G L+LSL
Sbjct: 347 GSLVSAAAGGGGRGLDRFWLLGFGNNQAYLKSRAGQPSLEAVWELHPIVVPDGGLALSL- 405
Query: 390 TTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSP 449
+ S +++A + W G +A ++E +L + + +P
Sbjct: 406 ------RCNSDAEQARATRPWPFANG------------TAATGDSELITLSCAKVAATTP 447
Query: 450 TSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFS---S 506
++P WLQ Y+ + L++ ++D W+ NS + SE TL+FS +
Sbjct: 448 --NVPPWLQGYQVQDTTRLASRSTSFQMQD----WDP--NSNGAAYHTSEITLSFSPQAT 499
Query: 507 ASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
SP +S+ S+ P+ + W F + +P R
Sbjct: 500 NSPDASSISGSF---APSLMMSSEPW------------QFKLMQPCPNYGRGDPFAR-SS 543
Query: 567 PEHKDLKQPLSSNRN-STPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKD 625
+ L +P S ++ S NS+ + E KF EL +ENL L NALE + P KD
Sbjct: 544 DRQQLLPRPTSPEKSYSVSNSSEGAPAAESP---KFTELTAENLKILSNALENRAPRHKD 600
Query: 626 TVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSH 685
V +IA+ VL+CRSG R++ ++ + TWL FQG D K+ ++KELARLVFGS+
Sbjct: 601 VVTEIASVVLQCRSGMTRKRRRWCCQEKPSAVTWLLFQGAGNDGKKAVSKELARLVFGSY 660
Query: 686 NNFVSIALSSFSSTRADSTEDS---RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVE 742
+ F +I+LS F+ +DS+ + +RS D SY++R +A+ NPHRV +I+ VE
Sbjct: 661 SKFTAISLSEFTHVHSDSSSGEITLKRQRSLDTGR-SYVQRLYDAILENPHRVIMIDGVE 719
Query: 743 QADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQK---SD 799
Q DY S+ G + AI +GRI +GDE+SLGD I++L+CE+ S S A SP KQ+ D
Sbjct: 720 QLDYESEIGIRNAITNGRIRGCNGDEISLGDTIIVLNCEALRSMSNASSPRLKQRVIEKD 779
Query: 800 GCEEEKGAAMEGT-SPSVSLDLNICIDD--DSTEDQSIDDIGLLESVDKRIIFKIME 853
G E G S +LDLN C +D + E+ D+ ++ VD F++ME
Sbjct: 780 GKEGNDMNMENGMESSGFTLDLNACAEDCEGNYEESVSDNARIVNIVDGVFFFQLME 836
>gi|413924950|gb|AFW64882.1| hypothetical protein ZEAMMB73_688581 [Zea mays]
Length = 835
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 356/897 (39%), Positives = 509/897 (56%), Gaps = 108/897 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGC +QQ L AEAA+VV+QA+ LARRRGHAQVTPLHVA+ ML+A+ GLLR ACL+SH
Sbjct: 1 MRAGGCAVQQALAAEAAAVVRQAVALARRRGHAQVTPLHVASAMLSAA-GLLRAACLRSH 59
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPML----GGHCQFPTISNALVAAFKRAQAHQRRG 116
SHPLQCKALELCFNVALNRLP + ++ G P +SNALVAAFKRAQAHQRRG
Sbjct: 60 SHPLQCKALELCFNVALNRLPTAAASMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRG 119
Query: 117 SIENQQ----QPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEIC 172
S++ Q QP+LA K++++QLIISILDDPSVSRVMREAGFSS+QVK+NVE+AVS
Sbjct: 120 SVDGAQGQPPQPVLAGKVDIDQLIISILDDPSVSRVMREAGFSSSQVKANVEKAVSAS-- 177
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVV 232
SS + ++ N T T + +S + D M V++ + S KR+ VV
Sbjct: 178 ------SSPEHQQQNT-----TIPPTSRAHAAISPGGAASGDAMRVLDCMASGSKRSVVV 226
Query: 233 VGECLASIEGVVRGVIDKIEKGDVP---EALRDVKCLPLSISSFRHMNRVEVEQRVEEIK 289
VGE A+ E VV+ V++++ KG++ E L++V+ +PLS +SF+ M R EVE + +++
Sbjct: 227 VGESAATAEVVVKAVMNRVSKGELQQRHERLKNVQFVPLSAASFQRMPREEVEAKAADLR 286
Query: 290 NLVRS--CLGRGIVLNLGDLEWAEFRASS-------------SEQVRGYYCSIEHIIMEI 334
LVR G+G+VL L DL +A ++ + +G YC +EH +ME+
Sbjct: 287 ALVRQGCAAGKGVVLVLEDLAYAAEAWAAVSETRRRSSGSGGRDHGQGCYCPVEHAVMEV 346
Query: 335 GKLVCGIGENA-----RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLI 389
G LV RFWL+G Q+Y++ ++G PSLE +W LHP+ +P G L+LSL
Sbjct: 347 GSLVSAAAGGGGRGLDRFWLLGFGNNQAYLKSRAGQPSLEAVWELHPIVVPDGGLALSL- 405
Query: 390 TTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSP 449
S +++A + W G +A ++E +L + + +P
Sbjct: 406 ---------SDAEQARATRPWPFANG------------TAATGDSELITLSCAKVAATTP 444
Query: 450 TSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFS---S 506
++P WLQ Y+ + L++ ++D W+ NS + SE TL+FS +
Sbjct: 445 --NVPPWLQGYQVQDTTRLASRSTSFQMQD----WDP--NSNGAAYHTSEITLSFSPQAT 496
Query: 507 ASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
SP +S+ S+ P+ + W F + +P R
Sbjct: 497 NSPDASSISGSF---APSLMMSSEPW------------QFKLMQPCPNYGRGDPFAR-SS 540
Query: 567 PEHKDLKQPLSSNRN-STPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKD 625
+ L +P S ++ S NS+ + E KF EL +ENL L NALE + P KD
Sbjct: 541 DRQQLLPRPTSPEKSYSVSNSSEGAPAAESP---KFTELTAENLKILSNALENRAPRHKD 597
Query: 626 TVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSH 685
V +IA+ VL+CRSG R++ ++ + TWL FQG D K+ ++KELARLVFGS+
Sbjct: 598 VVTEIASVVLQCRSGMTRKRRRWCCQEKPSAVTWLLFQGAGNDGKKAVSKELARLVFGSY 657
Query: 686 NNFVSIALSSFSSTRADSTEDS---RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVE 742
+ F +I+LS F+ +DS+ + +RS D SY++R +A+ NPHRV +I+ VE
Sbjct: 658 SKFTAISLSEFTHVHSDSSSGEITLKRQRSLDTGR-SYVQRLYDAILENPHRVIMIDGVE 716
Query: 743 QADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQK---SD 799
Q DY S+ G + AI +GRI +GDE+SLGD I++L+CE+ S S A SP KQ+ D
Sbjct: 717 QLDYESEIGIRNAITNGRIRGCNGDEISLGDTIIVLNCEALRSMSNASSPRLKQRVIEKD 776
Query: 800 GCEEEKGAAMEGT-SPSVSLDLNICIDD--DSTEDQSIDDIGLLESVDKRIIFKIME 853
G E G S +LDLN C +D + E+ D+ ++ VD F++ME
Sbjct: 777 GKEGNDMNMENGMESSGFTLDLNACAEDCEGNYEESVSDNARIVNIVDGVFFFQLME 833
>gi|326498641|dbj|BAK02306.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 853
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 360/899 (40%), Positives = 500/899 (55%), Gaps = 100/899 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--AASTGLLRTACLQ 58
MRAGGC +QQ L EAASVV+QA+TLARRRGHAQVTPLHVA ML A GLLR ACL+
Sbjct: 1 MRAGGCAVQQALAPEAASVVRQAVTLARRRGHAQVTPLHVATAMLLPPAPAGLLRAACLR 60
Query: 59 SHSHPLQCKALELCFNVALNRLPASTSTPMLGGH------------CQFPTISNALVAAF 106
SHSHPLQCKALELCFNVALNRLP M G + P +SNALVAAF
Sbjct: 61 SHSHPLQCKALELCFNVALNRLPTCGPAAMFHGGAHMQHHHHHRGAAEAPALSNALVAAF 120
Query: 107 KRAQAHQRRGS----IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN 162
KRAQAHQRRG ++ P+LA K+ELEQLI+SILDDPSVSRVMREAGFSS+QVK N
Sbjct: 121 KRAQAHQRRGGAGDGVQQTAAPVLAAKVELEQLIVSILDDPSVSRVMREAGFSSSQVKDN 180
Query: 163 VEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENL 222
VE+AVS SS+ S E + +T + K S+ + + ++D M V+E +
Sbjct: 181 VEKAVS----------SSSPSLERAANM--KTTGSIKESRAKSA----GSDDAMRVLECM 224
Query: 223 MSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP----EALRDVKCLPLSISSFRHMNR 278
S +R VVVGE E V+ V+DK+ K ++ E L+ V+ +PLS++SFRH R
Sbjct: 225 ASGTRRCLVVVGE---GAEAAVKAVMDKVSKSELHHRHHERLKSVQFVPLSVTSFRHAAR 281
Query: 279 VEVEQRVEEIKNLV--RSCLGRGIVLNLGDLEWAE--FRASSSEQVRG----YYCSIEHI 330
EV+ + +++ LV G+G+ L + DL +A + E V G YYC +EH
Sbjct: 282 EEVDAKTSDLRALVCEARAAGKGVALVVEDLAYAADAWHKRRGEHVHGGQSQYYCPVEHA 341
Query: 331 IMEIGKLVCGIGENA--RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIP-AGSLSLS 387
+ME+ LV G + RFWL+G A+ +M+C+ G PSLE +W +HPL +P GSL+LS
Sbjct: 342 VMEVSGLVSGDSGSGGGRFWLLGFASRTVFMKCRLGQPSLEAVWGIHPLVVPDGGSLALS 401
Query: 388 LITTDSDLQSQSTSKKAESGVSWLLFEGEEEN--KQLTCCADCSAKFEAEARSLQSSSCN 445
L T ++Q + + S W L G +LT CA
Sbjct: 402 LSCTS---EAQGSQQAGRSITGWPLVNGAATTGESELTWCA------------------R 440
Query: 446 SDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFS 505
+ SP ++P+W ++Y + + T +++ + L WN + N + SE TL+FS
Sbjct: 441 TPSPEPNIPSWFRRYHDPYQTTPTSSSTS--LHQLQDLWNPVRNWSATHHHTSELTLSFS 498
Query: 506 SASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLY 565
S + +++S Y+ P + + EP+Q W + HE + +E L
Sbjct: 499 SPASPAASSLSGYNNT-PTTMSSSKP-CQPEPRQPWPPSNQ--GHEDGPATRAEAIRDLP 554
Query: 566 IPEHKDLKQPLS-SNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQ- 623
++ P S S ++++PN KF EL +ENL +C LE VP
Sbjct: 555 RWHSTEIAFPESFSAQSNSPNDHGGGTADPERRRQKFTELTAENLKIMCGTLEDCVPGHI 614
Query: 624 KDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFG 683
KD +A+ VL+ RSG +R++ + S TWL F+G D D K+ +A ELA+LVFG
Sbjct: 615 KDVAAGVASAVLQRRSGMVRQRETPRPSST----TWLLFKGSDRDGKKSMALELAKLVFG 670
Query: 684 SHNNFVSIALSSFSSTRADSTEDSR-NKRSRD---EQSCSYIERFAEAVSNNPHRVFLIE 739
S+N+F SI+ + + + S+ R KR R E C+ +RF + + NP RV +I+
Sbjct: 671 SYNDFTSISSAGCTPVHSSSSSGERSGKRQRSPDYEHGCA--QRFYDTIHENPRRVVMID 728
Query: 740 DVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPT-KQKS 798
DVEQ S+ G K+AI SGR+ +G E SL DAI++LSCE+F SRSRA SP KQK
Sbjct: 729 DVEQMSLGSEIGIKKAIASGRVRGCNGVETSLEDAIIVLSCEAFDSRSRASSPRVIKQKV 788
Query: 799 DGCEEEKGAAMEGTS--PSVSLDLNICI---DDDSTEDQSID-DIGLLESVDKRIIFKI 851
EE+ G +G + P SLDLN C D+ E++ +D D+ + + VD F++
Sbjct: 789 ICDEEDSGGVEKGVTKPPCFSLDLNECASGDDEGHQEEEGLDSDVEICDVVDGVFFFRL 847
>gi|50251982|dbj|BAD27916.1| heat shock protein-related-like [Oryza sativa Japonica Group]
gi|50252658|dbj|BAD28827.1| heat shock protein-related-like [Oryza sativa Japonica Group]
Length = 917
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 378/927 (40%), Positives = 515/927 (55%), Gaps = 148/927 (15%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-----AASTGLLRTA 55
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ ML A + GLLR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CLQSHSHPLQCKALELCFNVALNRLPAST-STPMLG-GHC----QFPTISNALVAAFKRA 109
CL+SHSHPLQCKALELCFNVALNRLPAS ++P+LG GH P++SNALVAAFKRA
Sbjct: 61 CLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNALVAAFKRA 120
Query: 110 QAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
QAHQRRGS+E QQQP+LAVKIELEQL+ISILDDPSVSRVMREAGFSSTQVK+NVEQAV
Sbjct: 121 QAHQRRGSVETQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSTQVKANVEQAV-- 178
Query: 170 EICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP--IRNEDVMYVIENLMSKRK 227
S S ++ K + N S +A + +KP +D +R EDV +++ L ++ K
Sbjct: 179 ---SSSMEAATTKPQNPNPSSSSPPPAAHQEAKPSRCIDQVVVREEDVAAILDCLATRSK 235
Query: 228 RNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEE 287
+ +VV EC A+ E R +D+I +G+ + + + + L++S FR R E E+R+ E
Sbjct: 236 KRVMVVAECAAAAEAAARAAVDRIRRGEARQHAQ-AQVVTLAVSRFRGAPREEAERRLAE 294
Query: 288 IKNLVRSCLGRGIVLNLGDLEW-AEFRA------SSSEQVRG--YYCSIEHIIMEIGKLV 338
++ VR GR +VL + DL W AEF A SS G YYC++EH + E+ L
Sbjct: 295 LRCAVRGGGGRAVVLVVEDLAWAAEFWAGRRPPPSSCGAGAGGYYYCAVEHAVAEVRALA 354
Query: 339 C-GIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQ- 396
C G G WL+G T+Q+ +RC++GHPSLETLW LH L +PAGSL+LSL D+D
Sbjct: 355 CGGGGGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGLHTLAVPAGSLALSLTCADADAAA 414
Query: 397 -------------SQSTSKKAESGVS----WLLFEGEE-----ENKQLT----------C 424
+ ++K A S L + + QL C
Sbjct: 415 DDDDSGAMAAAAVNHQSAKGANGSTSPSPCLSLLDAAAAGGACSSGQLAVMAAAVSGAYC 474
Query: 425 CADCSAKFEA-EARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKK 483
DC+A +A +S+ ++ + T+++P WL ++++ A KK
Sbjct: 475 GGDCAAATKALLPQSVVFMPPSATTTTTTIPPWLHHCRDQEPAA------------HMKK 522
Query: 484 WNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
W S H L SS + S +S SY +QY H+ ++ W V
Sbjct: 523 W----MSAHGGSPSRRTALNISSTAVSPCSSVSSY-EQYTRLHQPYQPWLV--------- 568
Query: 544 HHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRN---STPNSTSSSDIMEMEYVH- 599
A D +E + YI + + + + +S++S+ +E+E+
Sbjct: 569 --------ADDDDEAEETKHPYIAGDGGAGRLVPAAAKVVIKSDDSSASNGSVEVEWRRP 620
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG----TMRRKGKFKDHSEVK 655
+FKE+++ENL LC ALEK+VPWQK V +IA+TVL+CRSG M R+ S K
Sbjct: 621 RFKEVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARRSSSC--SSSK 678
Query: 656 EETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIA------------LSSFSSTRADS 703
E TW+ F G DAD K ++A+ELA LVFGS +FVSI SS + + +
Sbjct: 679 EHTWMLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSSSSPARSSGST 738
Query: 704 TEDSRNKR-----------SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGF 752
+ R+KR RD+ ++E +AV +NP RV L+E V++AD G
Sbjct: 739 EQPHRSKRPWAETTTTTTSGRDQD---HLEALYDAVRDNPRRVILMERVDRADARCHDGI 795
Query: 753 KRAIE--SGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEE------ 804
+ AIE R G+E LGDAIV+LSCES + S +P K K++ E+
Sbjct: 796 RDAIERGVVRSRGGGGEEAFLGDAIVVLSCESLNPSS--TTPAKKAKTEYSVEKLDQDGD 853
Query: 805 ----KGAAMEGTSPSVSLDLNICIDDD 827
K A SPS DLN+ +DDD
Sbjct: 854 DHHGKEAVAAAASPSC-FDLNMSMDDD 879
>gi|242067491|ref|XP_002449022.1| hypothetical protein SORBIDRAFT_05g003570 [Sorghum bicolor]
gi|241934865|gb|EES08010.1| hypothetical protein SORBIDRAFT_05g003570 [Sorghum bicolor]
Length = 883
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 360/925 (38%), Positives = 511/925 (55%), Gaps = 116/925 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGC +QQ L AEAA+VV+QA+ LARRRGHAQVTPLHVA+ ML+A+ GLLR ACL+SH
Sbjct: 1 MRAGGCAVQQALAAEAAAVVRQAVALARRRGHAQVTPLHVASAMLSAA-GLLRAACLRSH 59
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGG----------------HCQFPTISNALVA 104
SHPLQCKALELCFNVALNRLP T+ P P +SNALVA
Sbjct: 60 SHPLQCKALELCFNVALNRLP--TAGPAAAAVMFHPHHHHHHAGHGQQHAVPVLSNALVA 117
Query: 105 AFKRAQAHQRRGSIENQQQPL-------------LAVKIELEQLIISILDDPSVSRVMRE 151
AFKRAQAHQRRG +E Q LA K+++EQLIISILDDPSVSRVMRE
Sbjct: 118 AFKRAQAHQRRGVVEGVQGQGQGQAPAQPPPQPVLAAKVDIEQLIISILDDPSVSRVMRE 177
Query: 152 AGFSSTQVKSNVEQAVSLEIC--------SQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
AGFSS+QVK+NVE+AVSL + + P S + S S AS+ + P
Sbjct: 178 AGFSSSQVKANVEKAVSLSSSSSLPDHQPNTTIPPSGAHATGSPAAGGSGHASSRR---P 234
Query: 204 RVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP---EAL 260
+ ++D M V++ + S KR VVVGE A+ E VV+ V+D++ KG++ E L
Sbjct: 235 NAGGNKADDDDAMRVLDCMASGTKRCVVVVGESAATAEVVVKSVMDRVSKGELQQRHERL 294
Query: 261 RDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRS--CLGRGIVLNLGDLEWAEFRASSSE 318
++V+ +PLS +SF+ M R EVE + +++ LVR G+G+VL L DL +A ++
Sbjct: 295 KNVQFVPLSAASFQRMPREEVEAKAGDLRALVRQGCAAGKGVVLVLEDLAFAADAWAAVS 354
Query: 319 QVRGY-----------YCSIEHIIMEIGKLVCGIGENA-------RFWLMGIATFQSYMR 360
+ R + YC +EH +ME+G LV RFWL+G Q+YM+
Sbjct: 355 ERRRHGSVGREHGQCGYCPVEHAVMEVGSLVSAAAGGGGGGRGLDRFWLLGFGNNQAYMK 414
Query: 361 CKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENK 420
++G PSLE +W LHP+ +P G LSLSL T +SD + + + W F
Sbjct: 415 SRAGQPSLEAVWELHPVVVPDGGLSLSL-TCNSDAEQANQDRATRP---WPSF------- 463
Query: 421 QLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDL 480
+ +A E+E L +SS + T S+P W + Y+ + ++ ++D
Sbjct: 464 -----VNGTASGESE---LITSSTKVAATTPSVPPWFRGYQVQDMTRPASRSASFQLQD- 514
Query: 481 CKKWNSICNSIHKQPYY--SERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPK 538
WN ++ + P Y SE TL+FSS + +S + P+F +++
Sbjct: 515 ---WN---HNFNGSPAYHTSELTLSFSSQATNSPDASSISSSFAPSFSAA----SLMMSS 564
Query: 539 QSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYV 598
+ W+ F + +P+ + +H+ L S ++ + +++S E
Sbjct: 565 EPWQ---FKVMQPCPNYRRDDPNALVRTYDHQQLHGRPSPEKSYSVSNSSEGAPAESP-- 619
Query: 599 HKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEET 658
KF EL +ENL LCNALE + P KD +IA+ VL+CRSG RR+ F++ T
Sbjct: 620 -KFTELTAENLKILCNALENRAPHHKDVATEIASVVLQCRSGMTRRRWWFQEKPSAV--T 676
Query: 659 WLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN----KRSRD 714
WL FQG D K+ + +ELARLVFGS++ F SI+L+ T ++ S KR R
Sbjct: 677 WLLFQGGGNDGKKAVCQELARLVFGSYSKFTSISLADDEFTHHVHSDSSSGEPMLKRQRS 736
Query: 715 -EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
+ YI+R +A+ +PHRV +I+ VEQ DY S+ G + AI +GRI +GDE+SLGD
Sbjct: 737 LDTGHGYIQRLYDAILKSPHRVIMIDGVEQLDYESEIGIRNAITNGRIRGCNGDEISLGD 796
Query: 774 AIVILSCESFSSRSRACSPPTKQK--SDGCEEEKGAAMEGT--SPSVSLDLNICIDDDST 829
AI++LSCE+ S S A SP KQ+ + +E G +E S +LDLN C +D
Sbjct: 797 AIIVLSCEALDSMSNASSPRLKQRVINKNGKEGNGMNIENGMESSGFTLDLNACAEDSEG 856
Query: 830 EDQSI-DDIGLLESVDKRIIFKIME 853
++S+ D+ ++ VD F++ME
Sbjct: 857 NEESVSDNARIINIVDGVFFFQLME 881
>gi|218185280|gb|EEC67707.1| hypothetical protein OsI_35183 [Oryza sativa Indica Group]
Length = 845
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 360/903 (39%), Positives = 504/903 (55%), Gaps = 112/903 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGC +QQ L AEAA VV+QA+TLARRRGHAQVTPLHVA+ ML+A+ GLLR ACLQSH
Sbjct: 1 MRAGGCAVQQALAAEAAGVVRQAVTLARRRGHAQVTPLHVASAMLSAA-GLLRAACLQSH 59
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPT-------------ISNALVAAFK 107
SHPLQCKALELCFNVALNRLP T+ P +SNALVAAFK
Sbjct: 60 SHPLQCKALELCFNVALNRLP--TAGPAAAAAIFHHHPHHPGGGGGHHPALSNALVAAFK 117
Query: 108 RAQAHQRRGSIENQQQP------LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKS 161
RAQAHQRRGS+E Q P ++A K+ELEQLIISILDDPSVSRVMREAGFSS+QVK+
Sbjct: 118 RAQAHQRRGSVEGQPPPQPPPSPVVASKVELEQLIISILDDPSVSRVMREAGFSSSQVKA 177
Query: 162 NVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIEN 221
NVE+AV + + S + S+ RV ++D M V++
Sbjct: 178 NVEKAVVASLDHANAAGGGGGHAGSPNSGHGGRRKESSSSRARV------DDDAMRVLDC 231
Query: 222 LMSKRKR-NFVVVGECLASIEGVVRGVIDKIEKGDVP---EALRDVKCLPLSISSFRHMN 277
+ S KR VV GE A+ E VV+ V+D++ K ++ E L++++ +PLSI+SF
Sbjct: 232 MASGTKRCVVVVGGEGAAAAEAVVKAVMDRVSKAELHHRHERLKNLQFVPLSIASFHGAP 291
Query: 278 RVEVEQRVEEIKNLVRS--CLGRGIVLNLGDLEWAEFRASSSEQVR---------GYYCS 326
R EVE + +++ LVRS G+G+VL L DL +A +++ R YC
Sbjct: 292 REEVEAKASDLRALVRSGCAAGKGVVLVLEDLAYAADAWAAASNTRRRAAAATGGQSYCP 351
Query: 327 IEHIIMEIGKLVCGIGENA-RFWLMGIATFQSYMRCKS-GHPSLETLWSLHPLTIPAGSL 384
+EH +ME+ LV G G RFW++G ++Q YM+C++ G P LE +W LHP+ +P G L
Sbjct: 352 MEHAVMEVSSLVSGGGGGGERFWVLGFGSYQVYMKCRAAGQPPLEAVWELHPVVVPDGGL 411
Query: 385 SLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSC 444
+LSL +++ SQ+T + A W ++
Sbjct: 412 ALSLTCSEA---SQATHQAAAPTAGWPFVN-----------------------GAGEAAA 445
Query: 445 NSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTF 504
+ SPT +P WL++Y++ AT ++ ++DL WN + N P+++
Sbjct: 446 TTASPT--IPPWLRRYQDPDHATPASCGTGLQIQDL---WNPMRNG--SAPHHTSELTLS 498
Query: 505 SSASPSSSTSGFS--YDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSL 562
S+ SS SG++ Y+ N + + W + E +Q W H HE
Sbjct: 499 FSSPSPSSISGYTSCYNN---NNMMSSKPWQL-EARQPWPIH----GHEGQ--------- 541
Query: 563 RLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPW 622
R+ + + D PL +N + NS S+S KF ELN+ENL LCNALE +VP
Sbjct: 542 RMAMASYHD-HHPLDTNPSPESNSVSNSLDGGETRRPKFIELNAENLKILCNALESRVPQ 600
Query: 623 QKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVF 682
+ V DIA+TVL+CRSG + K + K+ + TWL FQG D D K+ +A+ELA+LVF
Sbjct: 601 HSNIVPDIASTVLQCRSGMKKMKLRHKEIIKASSTTWLLFQGRDVDGKKAMAQELAKLVF 660
Query: 683 GSHNNFVSIALSSFSSTRADSTEDS---RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIE 739
GS F SI+ +S +DS+ + +RS D S+ +R E VS NPH+V +I
Sbjct: 661 GSSTEFSSISFDELTSPYSDSSSGELTLKRQRSADSNEHSFAQRLCEIVSKNPHQVIVIN 720
Query: 740 DVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES--FSSRSRACSPPTKQK 797
D+EQ D S+ K+AI +GR+ +G+EV DAI++LS E S + SP KQ+
Sbjct: 721 DIEQLDQDSEISIKKAIANGRMRGCTGEEVDFEDAIIVLSYEEEFDSRSRASSSPRVKQR 780
Query: 798 --SDGCEEEKGAAMEG-TSPS-VSLDLNICIDDDSTEDQS---IDD-IGLLESVDKRIIF 849
++ +EE + +G SP SLDLN C++D+ ED+ ID+ +G+ + VD F
Sbjct: 781 LMNNNDDEESSSTEKGDNSPQRFSLDLNACLEDEE-EDEGFLLIDNGVGMHDIVDGVFFF 839
Query: 850 KIM 852
+M
Sbjct: 840 GLM 842
>gi|62701870|gb|AAX92943.1| transposon protein, putative, mutator sub-class [Oryza sativa
Japonica Group]
gi|77548749|gb|ABA91546.1| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
gi|222615545|gb|EEE51677.1| hypothetical protein OsJ_33029 [Oryza sativa Japonica Group]
Length = 845
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 360/903 (39%), Positives = 504/903 (55%), Gaps = 112/903 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGC +QQ L AEAA VV+QA+TLARRRGHAQVTPLHVA+ ML+A+ GLLR ACLQSH
Sbjct: 1 MRAGGCAVQQALAAEAAGVVRQAVTLARRRGHAQVTPLHVASAMLSAA-GLLRAACLQSH 59
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPT-------------ISNALVAAFK 107
SHPLQCKALELCFNVALNRLP T+ P +SNALVAAFK
Sbjct: 60 SHPLQCKALELCFNVALNRLP--TAGPAAAAAIFHHHPHHPGGGGGHHPALSNALVAAFK 117
Query: 108 RAQAHQRRGSIENQQQP------LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKS 161
RAQAHQRRGS+E Q P ++A K+ELEQLIISILDDPSVSRVMREAGFSS+QVK+
Sbjct: 118 RAQAHQRRGSVEGQPPPQPPPSPVVASKVELEQLIISILDDPSVSRVMREAGFSSSQVKA 177
Query: 162 NVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIEN 221
NVE+AV + + S + S+ RV ++D M V++
Sbjct: 178 NVEKAVVASLDHANAAGGGGGHAGSPNSGHGGRRKESSSSRARV------DDDAMRVLDC 231
Query: 222 LMSKRKR-NFVVVGECLASIEGVVRGVIDKIEKGDVP---EALRDVKCLPLSISSFRHMN 277
+ S KR VV GE A+ E VV+ V+D++ K ++ E L++++ +PLSI+SF
Sbjct: 232 MASGTKRCVVVVGGEGAAAAEAVVKAVMDRVSKAELHHRHERLKNLQFVPLSIASFHGAP 291
Query: 278 RVEVEQRVEEIKNLVRS--CLGRGIVLNLGDLEWAEFRASSSEQVRGY---------YCS 326
R EVE + +++ LVRS G+G+VL L DL +A +++ R YC
Sbjct: 292 REEVEAKASDLRALVRSGCAAGKGVVLVLEDLAYAADAWAAASNTRRRAAAAAGGQSYCP 351
Query: 327 IEHIIMEIGKLVCGIGENA-RFWLMGIATFQSYMRCKS-GHPSLETLWSLHPLTIPAGSL 384
+EH +ME+ LV G G RFW++G ++Q YM+C++ G P LE +W LHP+ +P G L
Sbjct: 352 MEHAVMEVSSLVSGGGGGGERFWVLGFGSYQVYMKCRAAGQPPLEAVWELHPVVVPDGGL 411
Query: 385 SLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSC 444
+LSL +++ SQ+T + A W ++
Sbjct: 412 ALSLTCSEA---SQATHQAAAPTAGWPFVN-----------------------GAGEAAA 445
Query: 445 NSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTF 504
+ SPT +P WL++Y++ AT ++ ++DL WN + N P+++
Sbjct: 446 TTASPT--IPPWLRRYQDPDHATPASCGTGLQIQDL---WNPMRNG--SAPHHTSELTLS 498
Query: 505 SSASPSSSTSGFS--YDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSL 562
S+ SS SG++ Y+ N + + W + E +Q W H HE
Sbjct: 499 FSSPSPSSISGYTSCYNN---NNMMSSKPWQL-EARQPWPIH----GHEGQ--------- 541
Query: 563 RLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPW 622
R+ + + D PL +N + NS S+S KF ELN+ENL LCNALE +VP
Sbjct: 542 RMAMASYHD-HHPLDTNPSPESNSVSNSLDGGETRRPKFIELNAENLKILCNALESRVPQ 600
Query: 623 QKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVF 682
+ V DIA+TVL+CRSG + K + K+ + TWL FQG D D K+ +A+ELA+LVF
Sbjct: 601 HSNIVPDIASTVLQCRSGMKKMKLRHKEIIKASSTTWLLFQGRDVDGKKAMAQELAKLVF 660
Query: 683 GSHNNFVSIALSSFSSTRADSTEDS---RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIE 739
GS F SI+ +S +DS+ + +RS D S+ +R E VS NPH+V +I
Sbjct: 661 GSSTEFSSISFDELTSPYSDSSSGELTLKRQRSADSNEHSFAQRLCEIVSKNPHQVIVIN 720
Query: 740 DVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES--FSSRSRACSPPTKQK 797
D+EQ D S+ K+AI +GR+ +G+EV DAI++LS E S + SP KQ+
Sbjct: 721 DIEQLDQDSEISIKKAIANGRMRGCTGEEVDFEDAIIVLSYEEEFDSRSRASSSPRVKQR 780
Query: 798 --SDGCEEEKGAAMEG-TSPS-VSLDLNICIDDDSTEDQS---IDD-IGLLESVDKRIIF 849
++ +EE + +G SP SLDLN C++D+ ED+ ID+ +G+ + VD F
Sbjct: 781 LMNNNDDEESSSTEKGDNSPQRFSLDLNACLEDEE-EDEGFLLIDNGVGMHDIVDGVFFF 839
Query: 850 KIM 852
+M
Sbjct: 840 GLM 842
>gi|449437858|ref|XP_004136707.1| PREDICTED: uncharacterized protein LOC101217335 [Cucumis sativus]
Length = 757
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/413 (60%), Positives = 304/413 (73%), Gaps = 32/413 (7%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR GGCT+QQ LT EA +VVKQA+ LA+RRGHAQVTPLHVA+TML+ TGLLRTACLQSH
Sbjct: 1 MRTGGCTVQQALTCEALNVVKQAVILAKRRGHAQVTPLHVASTMLSPPTGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPML-------GGHCQFPTISNALVAAFKRAQAHQ 113
SHPLQCKALELCFNVALNRLPAS STP + H P+ISNALVAAFKRAQAHQ
Sbjct: 61 SHPLQCKALELCFNVALNRLPASNSTPPILTPSSHHHHHQSHPSISNALVAAFKRAQAHQ 120
Query: 114 RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICS 173
RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREA FSSTQVK+ VEQA+S+E
Sbjct: 121 RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREARFSSTQVKTKVEQAISIE--H 178
Query: 174 QSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVV 233
+TP S+N SN + T + R ED+ VI L +KR+ VVV
Sbjct: 179 NTTPASNNNDDNSNNNTTLLGGATTTSGRA-------REEDIAAVINELAEMKKRSLVVV 231
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVR 293
GEC+ ++E VV I ++EK +VPE L++VK + LSISSFR +R+EV+++V E+K+L+R
Sbjct: 232 GECVGNVECVVEAAIGRVEKKEVPECLKEVKFINLSISSFRDRSRIEVDEKVMELKSLIR 291
Query: 294 S--CLGRGIVLNLGDLEWA-----EFRASSSEQVRGYYCSIEHIIMEIGKLVCG------ 340
S C+G+G++L +GD++W+ + SS Q RGYYC +EH+IME+GKLV G
Sbjct: 292 SNYCIGKGVILYVGDIKWSIDYRENYYYHSSNQRRGYYCPVEHMIMELGKLVYGNYDQQI 351
Query: 341 ---IGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT 390
G W+MGIATFQ+YMRCK+G+PSLETL ++HPLTIP GS LSLIT
Sbjct: 352 HQPKGGGVNVWIMGIATFQTYMRCKTGNPSLETLLAIHPLTIPTGSFRLSLIT 404
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/279 (66%), Positives = 215/279 (77%), Gaps = 17/279 (6%)
Query: 592 IMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDH 651
++E EYV +FKELNSEN LCNALEKKVPWQK+ V DIA+ VL+CRSG RRKGK H
Sbjct: 480 VLEGEYVSRFKELNSENFKRLCNALEKKVPWQKNVVGDIASAVLQCRSGMGRRKGKM-GH 538
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSH-NNFVSIALSSFSSTR-ADSTEDS-R 708
+ KEETWL FQG D KEK+A+ELAR++FGS +N VSI LSSFSSTR ADSTED+ R
Sbjct: 539 GDFKEETWLLFQGNDLRGKEKVAEELARVIFGSATSNLVSITLSSFSSTRSADSTEDNCR 598
Query: 709 NKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
NKRSRDEQSCSY+ERFAEAVS NPHRVFL+EDVEQADY SQ GFKRAIE GRI S G +
Sbjct: 599 NKRSRDEQSCSYLERFAEAVSINPHRVFLVEDVEQADYSSQMGFKRAIEGGRITNSDGQQ 658
Query: 769 VSLGDAIVILSCESFSSRSRACSPPT----------KQKSDGCEEEKGAAMEGTSPSVSL 818
VSL D+IVILSCESFS+RSRACSPP +Q E+E+ E T+P ++L
Sbjct: 659 VSLADSIVILSCESFSARSRACSPPIKKQQENEQEQEQNKGEEEQEQKREEEETAPCLAL 718
Query: 819 DLNICIDDD---STEDQSIDDIGLLESVDKRIIFKIMEL 854
DLNI IDDD + DQSIDD+GLL+SVD+RIIF+I EL
Sbjct: 719 DLNISIDDDEDRAANDQSIDDVGLLDSVDRRIIFQIQEL 757
>gi|449527911|ref|XP_004170951.1| PREDICTED: chaperone protein ClpB1-like, partial [Cucumis sativus]
Length = 405
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/413 (60%), Positives = 304/413 (73%), Gaps = 32/413 (7%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR GGCT+QQ LT EA +VVKQA+ LA+RRGHAQVTPLHVA+TML+ TGLLRTACLQSH
Sbjct: 1 MRTGGCTVQQALTCEALNVVKQAVILAKRRGHAQVTPLHVASTMLSPPTGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPML-------GGHCQFPTISNALVAAFKRAQAHQ 113
SHPLQCKALELCFNVALNRLPAS STP + H P+ISNALVAAFKRAQAHQ
Sbjct: 61 SHPLQCKALELCFNVALNRLPASNSTPPILTPSSHHHHHQSHPSISNALVAAFKRAQAHQ 120
Query: 114 RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICS 173
RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREA FSSTQVK+ VEQA+S+E
Sbjct: 121 RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREARFSSTQVKTKVEQAISIE--H 178
Query: 174 QSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVV 233
+TP S+N SN + T + R ED+ VI L +KR+ VVV
Sbjct: 179 NTTPASNNNDDNSNNNTTLLGGATTTSGRA-------REEDIAAVINELAEMKKRSLVVV 231
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVR 293
GEC+ ++E VV I ++EK +VPE L++VK + LSISSFR +R+EV+++V E+K+L+R
Sbjct: 232 GECVGNVECVVEAAIGRVEKKEVPECLKEVKFINLSISSFRDRSRIEVDEKVMELKSLIR 291
Query: 294 S--CLGRGIVLNLGDLEWA-----EFRASSSEQVRGYYCSIEHIIMEIGKLVCG------ 340
S C+G+G++L +GD++W+ + SS Q RGYYC +EH+IME+GKLV G
Sbjct: 292 SNYCIGKGVILYVGDIKWSIDYRENYYYHSSNQRRGYYCPVEHMIMELGKLVYGNYDQQI 351
Query: 341 ---IGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT 390
G W+MGIATFQ+YMRCK+G+PSLETL ++HPLTIP GS LSLIT
Sbjct: 352 HQPKGGGVNVWIMGIATFQTYMRCKTGNPSLETLLAIHPLTIPTGSFRLSLIT 404
>gi|297740197|emb|CBI30379.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/326 (71%), Positives = 279/326 (85%), Gaps = 6/326 (1%)
Query: 208 DPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+P+RNEDVM VIENLM+KR++N V+VGECLA+IEGVVRGV+DK++KGDVPEALRDVK +
Sbjct: 106 NPVRNEDVMSVIENLMNKRRKNTVIVGECLATIEGVVRGVMDKVDKGDVPEALRDVKLIS 165
Query: 268 LSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWA-EFRASSSEQVRGYYCS 326
L + SF H +R EVEQ++ E+K+LV+SC+GRG++L L DL+W ++RASSSEQ R YYC
Sbjct: 166 LPLFSFGHHSREEVEQKLGELKSLVKSCVGRGVILYLEDLKWTTDYRASSSEQGRNYYCP 225
Query: 327 IEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSL 386
+EH+IME+GKLVCG GEN RFWLMGIATFQ+Y RC++GHPSLET+WSLHPLTIPA SL+L
Sbjct: 226 VEHMIMELGKLVCGFGENGRFWLMGIATFQTYSRCRTGHPSLETIWSLHPLTIPASSLAL 285
Query: 387 SLITTDSDLQSQSTSKKAESGVS-WLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCN 445
SL+ DSDLQSQ +SKKA SG S WL+ EG E KQLTCCADCSA FE EARS+ +S+CN
Sbjct: 286 SLMP-DSDLQSQFSSKKAGSGTSNWLMLEGGAE-KQLTCCADCSANFENEARSIPTSTCN 343
Query: 446 SDSPTSSLPAWLQQYKNEKKATLSNNDKDS-GVRDLCKKWNSICNSIHKQPYYSERTLTF 504
SDS TS+LP WLQQYK+E K LS ND+D VRDLCKKWNSIC+S HKQP+ SE+TLTF
Sbjct: 344 SDSTTSTLPTWLQQYKDENKK-LSRNDQDCVAVRDLCKKWNSICSSAHKQPHSSEKTLTF 402
Query: 505 SSASPSSSTSGFSYDQQYPNFHKTHR 530
SS SPSSSTSGFSYDQQYPN H+TH+
Sbjct: 403 SSLSPSSSTSGFSYDQQYPNLHQTHQ 428
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/102 (89%), Positives = 96/102 (94%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA VVKQA+TLARRRGHAQVTPLHVANTMLAA+ GLLRTACLQSH
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNAL 102
SHPLQCKALELCFNVALNRLPASTS+PMLG H Q P+ISNAL
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNAL 102
>gi|297735465|emb|CBI17905.3| unnamed protein product [Vitis vinifera]
Length = 974
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 327/930 (35%), Positives = 476/930 (51%), Gaps = 147/930 (15%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG CT+QQ LT EAASV+K +++LARRRGHAQVTPLHVA T+L++ LLR ACL+S
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 ----SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
+HPLQC+ALELCFNVALNRLP +T P+L G P++SNAL+AA KRAQAHQRRG
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLP-TTPGPLLHGQ---PSLSNALIAALKRAQAHQRRG 116
Query: 117 SIE-NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQS 175
IE QQQPLL +K+ELEQLIISILDDPSVSRVMREAGFSST VK+N+E + + +
Sbjct: 117 CIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQCY 176
Query: 176 TPVSSNKSKESNVLVLSQTASATKVS-KPRVSLDPIRN-----EDVMYVIENLMSKRKRN 229
++ + ++++L S + S + ++S +PI + ED+ V+E L+ K++RN
Sbjct: 177 NIINPSTFWQTHILAYSSEQNPLLFSPQKKLSSNPITDSTSVKEDLKLVLEVLLRKKRRN 236
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEE 287
V+VG+ +++ EG+V ++ +IE+G+VPE L+ + S + R M R EVE + +
Sbjct: 237 TVIVGDSVSTTEGLVAELMGRIERGEVPEELKSAHFVKFQFSPVTLRFMKREEVEMNLSD 296
Query: 288 IKNLVRSCLG---RGIVLNLGDLEWAEFRASSSEQVRGY-------YCSIEHIIMEIGKL 337
+K V S G ++ GDL+W A+ S++ G+ Y I+H++ EIG+L
Sbjct: 297 LKRKVDSLASGGGGGAIIYAGDLKWT-VEAAVSDRDGGFPNGEASAYNPIDHLVAEIGRL 355
Query: 338 VCG-IGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQ 396
+ N R WLM A++Q+YMRC+ PSLE W+L +++P+G L LSL S +
Sbjct: 356 LSDYTTSNTRVWLMATASYQTYMRCQMKQPSLEIQWALQAVSVPSGGLGLSLHA--SSVH 413
Query: 397 SQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAW 456
+ +A + F +EE+ +L+CCA+C+A +E E +S LP+W
Sbjct: 414 DSRSQNQAHHVLETKPFAAKEEHDKLSCCAECTANYEKEVGLFKSGQ------QKLLPSW 467
Query: 457 LQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTF----SSASPSSS 512
LQ + E + KD V +L +KWN +C+S+H+ Y + + +S P +
Sbjct: 468 LQAHGVEAR------QKDDLV-ELRRKWNRLCHSLHQGSYSYTSSYPWWPNQNSIFPDLN 520
Query: 513 TSGFSYDQQYPNFHKTHRDWAVVEPKQSWREH-HFLFSHEASDKSTSEPSLR-LYIPEHK 570
+ F+ PN H V ++ H F F + + + EPSL L E K
Sbjct: 521 SISFTNSALKPN----HASSLVPRFRRQQSCHIEFSFGNGMHKQQSVEPSLDCLKKTEGK 576
Query: 571 DLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSEN---LTSLCNALEKKVPWQKDTV 627
D+K L+ + +S K EL E L +C LE+ VPWQ + +
Sbjct: 577 DVKITLALGTSVYSDSG------------KLPELKGEKTIRLRDICKLLEENVPWQSEAI 624
Query: 628 YDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNN 687
IA ++ +S K+ETWL QG D+ K ++A +A VFGS +
Sbjct: 625 SPIAEALIDSKSS--------------KKETWLLLQGNDSIGKRRLAHAIAESVFGSADL 670
Query: 688 FVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYC 747
+ N R D E EA+ + V ++EDV+ A+
Sbjct: 671 VFRM-----------------NMRKLDNGVTPCSEILTEALRAHQKLVVMVEDVDFAEPQ 713
Query: 748 SQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC-ESFSSRSRA--------------CSP 792
K E+G SS E S G AI IL+ +S S + R +
Sbjct: 714 FMKFLADGCETGEFRDSSKREGSFGQAIFILTTGDSSSYQERKGNKSSVIHMKLQINLTI 773
Query: 793 PTKQKSDGCEEEKGAAMEGTSPSVS-------------LDLNICID-DDSTED------- 831
PT + + K + P S LDLNI D DD ++D
Sbjct: 774 PTLGTPNMDHKRKADCLISVEPGNSKILEFTRQLSFNTLDLNIRADEDDESKDKPRELSP 833
Query: 832 -------QSIDDI----GLLESVDKRIIFK 850
++ DI G LES++ R FK
Sbjct: 834 ISSDLTRETATDIQNPHGFLESIENRFTFK 863
>gi|255556741|ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
gi|223541471|gb|EEF43021.1| conserved hypothetical protein [Ricinus communis]
Length = 1008
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 292/825 (35%), Positives = 438/825 (53%), Gaps = 110/825 (13%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS- 59
MR+G CT+QQ LTAEAASV+K +++LARRRGHAQVTPLHVA T+L++ LLR ACL+S
Sbjct: 1 MRSGACTVQQTLTAEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 60 ---HSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
+SHPLQC+ALELCFNVALNRLP +T P+L G P++SNAL+AA KRAQAHQRRG
Sbjct: 61 PHQNSHPLQCRALELCFNVALNRLP-TTPGPLLHGQ---PSLSNALIAALKRAQAHQRRG 116
Query: 117 SIE-NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ--AVSLEIC- 172
IE QQQPLL +K+ELEQLIISILDDPSVSRVMREAGFSST VKSN+E A S+ C
Sbjct: 117 CIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTSVKSNIEDSSASSVFQCY 176
Query: 173 --------SQSTPVSSNK----------------SKESNVLVLS--QTASATKVSKPRVS 206
S S+P +++ S E N L+ S + S + S
Sbjct: 177 TTSGGVFSSPSSPGETHREIINPTSFWQTHFLSYSAEKNPLLFSPQKKLSTNYFTDSSAS 236
Query: 207 LDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
+ ED+ V E + K+K+N V+VG+ ++ EG+V ++ ++E+G+VP L+ ++ +
Sbjct: 237 V----KEDIKLVFEVFLRKKKKNTVIVGDRVSITEGLVGELMGRVERGEVPAELKQIQFV 292
Query: 267 PLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYY 324
+ S R M + +VE + ++K V S G+++ GDL+W ++ + G Y
Sbjct: 293 KFQFAPVSLRFMKKEDVEMNITQLKRKVDSIGDSGVIIYTGDLKWTVEESA----INGEY 348
Query: 325 CSIEHIIMEIGKLVCGIG-ENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGS 383
++H++ E G+L+ NAR WLM A +Q+YMRC+ PSLE W+L +++P+G
Sbjct: 349 SPVDHLVAETGRLLSDYSCSNARVWLMATANYQTYMRCQMRQPSLEIEWALQAVSVPSGG 408
Query: 384 LSLSLITTDSDLQSQSTSKKAESGV---SWLLFEGEEENKQLTCCADCSAKFEAEARSLQ 440
L LSL + S +S+ T + S V L+ ++E +LTCC +C + +E EA+ L+
Sbjct: 409 LGLSLHGS-SIHESRMTFNQNPSQVLETKPLISNSKDEQDKLTCCPECISSYEKEAQVLK 467
Query: 441 SSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSER 500
S +LP WL N + T ++ ++++ +R +KWN +C +H Q ++
Sbjct: 468 SVQ------QKNLPPWL----NPRGTTTNDMNEEAELR---RKWNGLCQGLHHQGRNTQN 514
Query: 501 TL--TFSSASPSSSTS-GFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKST 557
L TF + + T +S ++P+ + +D + S + F S +
Sbjct: 515 NLASTFCNNNNQGLTGKSYSLYPRWPSQNNIFQDSNSISFTDSALKPDFTSSFVPKFRRQ 574
Query: 558 SEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENL---TSLCN 614
+ + +QP N +S N+ + + + F E+ LC
Sbjct: 575 QSCKIDFKFGDVTQKQQP---NLDSLKNTQGKEVKITLALGNSFFSATGESAKGKNDLCR 631
Query: 615 ALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIA 674
L+ VPWQ + ++ IA + + +S RKG TWL QG D K +A
Sbjct: 632 LLQDNVPWQSEIIHSIAEALFESKSN---RKG-----------TWLLIQGNDIVGKRILA 677
Query: 675 KELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHR 734
+A V GS ++ + I N + RD ++ Y E A +
Sbjct: 678 LTIAESVLGSADSLLYI-----------------NMKRRDNEAVPYSEMITRAFRSQERL 720
Query: 735 VFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
V L+ED++ +D K ESG+ G+ +LG AI IL+
Sbjct: 721 VALVEDIDFSDTHLLKFLADGFESGKF----GESGNLGQAIFILT 761
>gi|147803027|emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
Length = 1032
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 336/987 (34%), Positives = 485/987 (49%), Gaps = 203/987 (20%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG CT+QQ LT EAASV+K +++LARRRGHAQVTPLHVA T+L++ LLR ACL+S
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 ----SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
+HPLQC+ALELCFNVALNRLP +T P+L G P++SNAL+AA KRAQAHQRRG
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLP-TTPGPLLHGQ---PSLSNALIAALKRAQAHQRRG 116
Query: 117 SIENQQQ-PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ--AVSLEICS 173
IE QQQ PLL +K+ELEQLIISILDDPSVSRVMREAGFSST VK+N+E A S+ C
Sbjct: 117 CIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQCY 176
Query: 174 QST-----------PVSSNK----------------SKESNVLVLSQTASATKVSKPRVS 206
S+ P +++ S E N L+ S K+S ++
Sbjct: 177 SSSGGVFSSPCSPSPTETHRDIINPSTFWQTHILAYSSEQNPLLFS---PQKKLSSNTIT 233
Query: 207 LDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
ED+ V+E L+ K++RN V+VG+ +++ EG+V ++ +IE+G+VPE L+ +
Sbjct: 234 DSTSVKEDLKLVLEVLLRKKRRNTVIVGDSVSTTEGLVAELMGRIERGEVPEELKSAHFV 293
Query: 267 PLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG---DLEWAEFRASSSEQVR 321
S + R M R EVE + ++K V S G + DL+W A+ S++
Sbjct: 294 KFQFSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWT-VEAAVSDRDG 352
Query: 322 GY-------YCSIEHIIMEIGKLVCG-IGENARFWLMGIATFQSYMRCKSGHPSLETLWS 373
G+ Y I+H++ EIG+L+ N R WLM A++Q+YMRC+ PSLE W+
Sbjct: 353 GFPSGEASAYNPIDHLVAEIGRLLSDYTTSNTRVWLMATASYQTYMRCQMKQPSLEIQWA 412
Query: 374 LHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFE 433
L +++P+G L LSL S + + +A + F +EE+ +L+CCA+C+A +E
Sbjct: 413 LQAVSVPSGGLGLSLHA--SSVHDSRSQNQAHHVLETKPFAAKEEHDKLSCCAECTANYE 470
Query: 434 AEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHK 493
E +S LP+WLQ + E + KD V +L +KWN +C+S+H+
Sbjct: 471 KEVGLFKSGQ------QKLLPSWLQAHGVEAR------QKDDLV-ELRRKWNRLCHSLHQ 517
Query: 494 ---------QPYYSERTLTFSSASPSSSTSGF-SYDQQYPNFHKTHRDWAVVEPKQS--- 540
+S + L S S +SS + + + +P+ + + ++P +
Sbjct: 518 GRSNQNHLSSSMFSNQNLLGKSYSYTSSYPWWPNQNSIFPDLNSISFTNSALKPNHASSL 577
Query: 541 ---WREHH-----FLFSHEASDKSTSEPSLR-LYIPEHKDLKQPLSSNRNSTPNSTSSSD 591
+R F F + + + EPSL L E KD+K L+ + +S
Sbjct: 578 VPRFRRQQSCHIEFSFGNVMHKQQSVEPSLDCLKKTEGKDVKITLALGTSVYSDSG---- 633
Query: 592 IMEMEYVHKFKELNSEN---LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKF 648
K EL E L +C LE+ VPWQ + + IA ++ +S
Sbjct: 634 --------KLPELKGEKTIRLRDICKLLEENVPWQSEAISPIAEALIDSKSS-------- 677
Query: 649 KDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSR 708
K+ETWL QG D+ K ++A +A VFGS + +
Sbjct: 678 ------KKETWLLLQGNDSIGKRRLAHAIAESVFGSADLVFRM----------------- 714
Query: 709 NKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
N R D E EA+ + V ++EDV+ A+ K E+G SS E
Sbjct: 715 NMRKLDNGVTPCSEILTEALRAHQKLVVMVEDVDFAEPQFMKFLADGCETGEFRDSSKRE 774
Query: 769 VSLGDAIVILSC-ESFSSRSRA--------------CSPPT------------------K 795
S G AI IL+ +S S + R + PT +
Sbjct: 775 GSFGQAIFILTTGDSSSYQERKGNKSSVIHMKLQINLTIPTLGTPNMDHKRKAEWDLSNR 834
Query: 796 QKSDGCEEEKGAAMEGTSPSVS-------------LDLNICID-DDSTED---------- 831
KS +EE+G+ + P S LDLNI D DD ++D
Sbjct: 835 TKSPRTDEEEGSCLISVEPGNSKILEFTRQLSFNTLDLNIRADEDDESKDKPRELSPISS 894
Query: 832 ----QSIDDI----GLLESVDKRIIFK 850
++ DI G LES++ R FK
Sbjct: 895 DLTRETATDIQNPHGFLESIENRFTFK 921
>gi|359485128|ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
Length = 1045
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 337/995 (33%), Positives = 492/995 (49%), Gaps = 206/995 (20%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG CT+QQ LT EAASV+K +++LARRRGHAQVTPLHVA T+L++ LLR ACL+S
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 ----SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
+HPLQC+ALELCFNVALNRLP +T P+L G P++SNAL+AA KRAQAHQRRG
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLP-TTPGPLLHGQ---PSLSNALIAALKRAQAHQRRG 116
Query: 117 SIENQQQ-PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ--AVSLEICS 173
IE QQQ PLL +K+ELEQLIISILDDPSVSRVMREAGFSST VK+N+E A S+ C
Sbjct: 117 CIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQCY 176
Query: 174 QST------PVSSNKSK------------ESNVLVLSQTASATKVS-KPRVSLDPIRN-- 212
S+ P S + ++ ++++L S + S + ++S +PI +
Sbjct: 177 SSSGGVFSSPCSPSPTETHRDIINPSTFWQTHILAYSSEQNPLLFSPQKKLSSNPITDST 236
Query: 213 ---EDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLS 269
ED+ V+E L+ K++RN V+VG+ +++ EG+V ++ +IE+G+VPE L+ +
Sbjct: 237 SVKEDLKLVLEVLLRKKRRNTVIVGDSVSTTEGLVAELMGRIERGEVPEELKSAHFVKFQ 296
Query: 270 IS--SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG---DLEWAEFRASSSEQVRGY- 323
S + R M R EVE + ++K V S G + DL+W A+ S++ G+
Sbjct: 297 FSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWT-VEAAVSDRDGGFP 355
Query: 324 ------YCSIEHIIMEIGKLVCG-IGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHP 376
Y I+H++ EIG+L+ N R WLM A++Q+YMRC+ PSLE W+L
Sbjct: 356 NGEASAYNPIDHLVAEIGRLLSDYTTSNTRVWLMATASYQTYMRCQMKQPSLEIQWALQA 415
Query: 377 LTIPAGSLSLSL-----ITTDSD------LQSQSTSKKAESGVSWLLFEGEEENKQLTCC 425
+++P+G L LSL I D + + +A + F +EE+ +L+CC
Sbjct: 416 VSVPSGGLGLSLHASSLINKAEDHCEKVSVHDSRSQNQAHHVLETKPFAAKEEHDKLSCC 475
Query: 426 ADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWN 485
A+C+A +E E +S LP+WLQ + E + KD V +L +KWN
Sbjct: 476 AECTANYEKEVGLFKSGQ------QKLLPSWLQAHGVEAR------QKDDLV-ELRRKWN 522
Query: 486 SICNSIHK---------QPYYSERTLTFSSASPSSSTSGF-SYDQQYPNFHKTHRDWAVV 535
+C+S+H+ +S + L S S +SS + + + +P+ + + +
Sbjct: 523 RLCHSLHQGRSNQNHLSSSMFSNQNLLGKSYSYTSSYPWWPNQNSIFPDLNSISFTNSAL 582
Query: 536 EPKQS------WREHH-----FLFSHEASDKSTSEPSLR-LYIPEHKDLKQPLSSNRNST 583
+P + +R F F + + + EPSL L E KD+K L+ +
Sbjct: 583 KPNHASSLVPRFRRQQSCHIEFSFGNGMHKQQSVEPSLDCLKKTEGKDVKITLALGTSVY 642
Query: 584 PNSTSSSDIMEMEYVHKFKELNSEN---LTSLCNALEKKVPWQKDTVYDIANTVLKCRSG 640
+S K EL E L +C LE+ VPWQ + + IA ++ +S
Sbjct: 643 SDSG------------KLPELKGEKTIRLRDICKLLEENVPWQSEAISPIAEALIDSKSS 690
Query: 641 TMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR 700
K+ETWL QG D+ K ++A +A VFGS + +
Sbjct: 691 --------------KKETWLLLQGNDSIGKRRLAHAIAESVFGSADLVFRM--------- 727
Query: 701 ADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGR 760
N R D E EA+ + V ++EDV+ A+ K E+G
Sbjct: 728 --------NMRKLDNGVTPCSEILTEALRAHQKLVVMVEDVDFAEPQFMKFLADGCETGE 779
Query: 761 IVTSSGDEVSLGDAIVILSC-ESFSSRSRA--------------CSPPT----------- 794
SS E S G AI IL+ +S S + R + PT
Sbjct: 780 FRDSSKREGSFGQAIFILTTGDSSSYQERKGNKSSVIHMKLQINLTIPTLGTPNMDHKRK 839
Query: 795 -------KQKSDGCEEEKGAAMEGTSPSVS-------------LDLNICID-DDSTED-- 831
+ KS +EE+G+ + P S LDLNI D DD ++D
Sbjct: 840 AEWDLSNRTKSPRTDEEEGSCLISVEPGNSKILEFTRQLSFNTLDLNIRADEDDESKDKP 899
Query: 832 ------------QSIDDI----GLLESVDKRIIFK 850
++ DI G LES++ R FK
Sbjct: 900 RELSPISSDLTRETATDIQNPHGFLESIENRFTFK 934
>gi|449446307|ref|XP_004140913.1| PREDICTED: uncharacterized protein LOC101210915 [Cucumis sativus]
Length = 762
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/412 (56%), Positives = 303/412 (73%), Gaps = 30/412 (7%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MRAG CTIQ Q L+ EA + VKQA+ LARRRGHA VTPLHVA+ MLA+S+GLLR ACL
Sbjct: 1 MRAGICTIQLQALSIEAEATVKQAIGLARRRGHAHVTPLHVASAMLASSSGLLRRACLHC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIE 119
HSHPLQCKALELCFNVALNRLP ST +P+ G P +SNALVAAFKRAQAHQRRGSIE
Sbjct: 61 HSHPLQCKALELCFNVALNRLPTSTPSPLFGPQYPNPCLSNALVAAFKRAQAHQRRGSIE 120
Query: 120 N-------QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE-- 170
N QQQP+LA+KIELEQLIISILDDPSVSRVMREAGFSSTQVK+ VE+AVSLE
Sbjct: 121 NQQQQQHQQQQPILALKIELEQLIISILDDPSVSRVMREAGFSSTQVKNRVEKAVSLEVK 180
Query: 171 ICSQSTP-VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMS----- 224
I ++ P +S N S+ + +Q TK+ + + E+V +V+E L +
Sbjct: 181 ITHKTHPNLSINPSQS---IPFTQI---TKIPSTKQQFENNNEEEVTHVLEELSNRMNNK 234
Query: 225 -KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLS-ISSFRH-MNRVEV 281
+R N ++VGE L ++E +VRGV+++ EKG+VP+ L+ V+ L L+ + S R+ +++ E+
Sbjct: 235 MRRVSNTIIVGESLGTVETIVRGVMERFEKGEVPKELKHVEFLSLNPLFSLRNVVSKEEI 294
Query: 282 EQRVEEIKNLVRSCLGRGIVLNLGDLEW-AEFRAS--SSEQVRGYYCSIEHIIMEIGKLV 338
EQ++ E++ +V+SC+G+ ++ LGDL+W +EF ++ E+ R +Y +E +IMEI +LV
Sbjct: 295 EQKILELRCIVKSCMGKRVIFYLGDLKWVSEFWSNYCYGEEERRFYSYVEELIMEIKRLV 354
Query: 339 CGIG-EN-ARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL 388
EN +FW++GIATFQ YM+CK GHPSL++LWSLHPLT+P GSLSLSL
Sbjct: 355 NNNNSENYGKFWVLGIATFQMYMKCKVGHPSLDSLWSLHPLTVPVGSLSLSL 406
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 113/191 (59%), Gaps = 18/191 (9%)
Query: 660 LFFQGVDAD-AKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSC 718
L F G D D AKEK A+E+A+++FGS + + + LS+F E S KR R+E
Sbjct: 588 LSFVGNDHDEAKEKAAREIAKIIFGSQSKMICMGLSNFK--EGTDGEKSMKKRGRNEMGW 645
Query: 719 SYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVIL 778
+Y+ERFAEAV+ NPHRVF IED+EQ DYCS KG K AIE GR+ S G+ SL DAI+I+
Sbjct: 646 NYLERFAEAVNENPHRVFFIEDIEQIDYCSLKGLKEAIEKGRVKLSDGEFCSLKDAIIII 705
Query: 779 SCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDIG 838
+ S + A KQ+ ++++ A VSLDLNI I D+ DQ I
Sbjct: 706 N----SQKQIA----VKQEQPEEDQDQKATF------VSLDLNIAI-QDTNGDQKILRSI 750
Query: 839 LLESVDKRIIF 849
+ E V +I+F
Sbjct: 751 MEECVHGKILF 761
>gi|449494128|ref|XP_004159457.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210915
[Cucumis sativus]
Length = 761
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/408 (55%), Positives = 296/408 (72%), Gaps = 23/408 (5%)
Query: 1 MRAGGCTIQ-QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS 59
MRAG CTIQ Q L+ EA + VKQA+ LARRRGHA VTPLHVA+ M A+S+GLLR ACL
Sbjct: 1 MRAGICTIQLQALSIEAEATVKQAIGLARRRGHAHVTPLHVASAMPASSSGLLRRACLHC 60
Query: 60 HSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIE 119
HSHPLQCKALELCFNVALNRLP ST +P+ G P +SNALVAAFKRAQAHQRRGSIE
Sbjct: 61 HSHPLQCKALELCFNVALNRLPTSTPSPLFGPQYPNPCLSNALVAAFKRAQAHQRRGSIE 120
Query: 120 N-------QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE-- 170
N QQQP+LA+KIELEQLIISILDDPSVSRVMREAGFSSTQVK+ VE+AVSLE
Sbjct: 121 NQQQQQHQQQQPILALKIELEQLIISILDDPSVSRVMREAGFSSTQVKNRVEKAVSLEVK 180
Query: 171 ICSQSTP-VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKR- 228
I ++ P +S N S+ + +Q + + + +V+ + N M+ + R
Sbjct: 181 ITHKTHPNLSINPSQS---IPFTQITKIPSTKQQFENNNEEEVTNVLEELSNRMNNKMRR 237
Query: 229 --NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRH-MNRVEVEQRV 285
N ++VGE L ++E +VRGV+++ EKG+VP+ L+ V+ L L S R+ +++ E+EQ++
Sbjct: 238 VSNTIIVGESLGTVETIVRGVMERFEKGEVPKELKHVEFLSLPSVSLRNVVSKEEIEQKI 297
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEW-AEFRAS--SSEQVRGYYCSIEHIIMEIGKLVCGIG 342
E++ +V+SC+G+ ++ LGDL+W +EF ++ E+ R +Y +E +IMEI +LV
Sbjct: 298 LELRCIVKSCMGKRVIFYLGDLKWVSEFWSNYCYGEEERRFYSYVEELIMEIKRLVNNNN 357
Query: 343 -EN-ARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL 388
EN +FW++GIATFQ YM+CK GHPSL++LWSLHPLT+P GSLSLSL
Sbjct: 358 SENYGKFWVLGIATFQMYMKCKVGHPSLDSLWSLHPLTVPVGSLSLSL 405
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 113/191 (59%), Gaps = 18/191 (9%)
Query: 660 LFFQGVDAD-AKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSC 718
L F G D D AKEK A+E+A+++FGS + + + LS+F E S KR R+E
Sbjct: 587 LSFVGNDHDEAKEKTAREIAKIIFGSQSKMICMGLSNFK--EGTDGEKSMKKRGRNEMGW 644
Query: 719 SYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVIL 778
+Y+ERFAEAV+ NPHRVF IED+EQ DYCS KG K AIE GR+ S G+ SL DAI+I+
Sbjct: 645 NYLERFAEAVNENPHRVFFIEDIEQIDYCSLKGLKEAIEKGRVKLSDGEFCSLKDAIIII 704
Query: 779 SCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDIG 838
+ S + A KQ+ ++++ A VSLDLNI I D+ DQ I
Sbjct: 705 N----SQKQIA----VKQEQPEEDQDQKATF------VSLDLNIAI-QDTNGDQKILRSI 749
Query: 839 LLESVDKRIIF 849
+ E V +I+F
Sbjct: 750 MEECVHGKILF 760
>gi|356564815|ref|XP_003550643.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 1010
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 295/834 (35%), Positives = 424/834 (50%), Gaps = 151/834 (18%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACL--- 57
MR+G CT+QQ LTAEAASV+K ++ LARRRGHAQVTPLHVA T+L+ LR ACL
Sbjct: 1 MRSGVCTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSS 60
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
Q+ HPLQC+ALELCFNVALNRLP +T +P++ H Q P++SNAL+AA KRAQAHQRRG
Sbjct: 61 QASHHPLQCRALELCFNVALNRLP-TTPSPLI--HTQ-PSLSNALIAALKRAQAHQRRGC 116
Query: 118 IE-NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI----C 172
IE QQQPLL +K+ELE LIISILDDPSVSRVMREAGFSST VK+++E + S + C
Sbjct: 117 IEQQQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNHIEDSNSPQYSVFQC 176
Query: 173 SQ------STPVSSNKSKESN------------------------------VLVLSQTAS 196
S+P S + S+ +N LV S +
Sbjct: 177 YNSSGGVFSSPCSPSASENNNHRETATNNNPTNFRHTTRHFLTSYASEFHPSLVFSPPKN 236
Query: 197 ATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
A S + +++DV V++ L+ K+K+N V+VG+ L+ EG+V ++ ++E+ +V
Sbjct: 237 APVCSITGAASSSSKDDDVRLVLDILLRKKKKNTVIVGDSLSLTEGLVGEIMGRLERSEV 296
Query: 257 PEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLG--RGIVLNLGDLEWAEF 312
P+ L+ + + IS S M R EVE ++ E++ V S G + +GDL+W
Sbjct: 297 PDELKSIHFIKFQISHVSLSCMKRDEVEMKLLELERKVNSIASGGGGGIFYIGDLKWTVE 356
Query: 313 RASSSEQVRGY-------YCSIEHIIMEIGKLV--CGIGENARFWLMGIATFQSYMRCKS 363
AS SE+ G Y ++H++ EIGKL CG NA+ WLM A++Q+YMRC+
Sbjct: 357 EASLSEKEEGSPNGEVSGYNPVDHLVSEIGKLFCDCGTSNNAKVWLMATASYQTYMRCQM 416
Query: 364 GHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGV-SWLLFEGEEENKQL 422
P LE W+L + +P+G L LSL S L S+ T +S V F E+ +L
Sbjct: 417 RQPPLEKQWALQAVPVPSGGLGLSL-HAPSVLDSKMTISHNQSQVLETKPFGNMEQEDKL 475
Query: 423 TCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCK 482
CC +C++ +E EA+ ++ LP WLQ + E ++ KD V+ L +
Sbjct: 476 NCCEECASNYEKEAQFIRPDQ------KKRLPFWLQSHITE------DHKKDELVQ-LKR 522
Query: 483 KWNSICNSIH--KQP----------YYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHR 530
KWN +C+ +H KQP Y S +++F+S + STS P F +
Sbjct: 523 KWNRLCHCLHQSKQPQNQWNWNHNSYNSPSSISFASNATHGSTSKL-----VPRFRRQQS 577
Query: 531 DWAVVEPKQSWREHHFLFSHEASDKSTSEPSL-RLYIPEHKDLKQPLSSNRNSTPNSTSS 589
++E F F + +EP L L E K++K L+ N ++
Sbjct: 578 --CIIE---------FNF---GKKREATEPVLDSLESMEGKEVKTTLALG-NGGSGESAV 622
Query: 590 SDIME--MEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGK 647
DI + ++ H +C L++ VPWQ +T IA ++ +S
Sbjct: 623 GDITDTTLQRAH------------ICKLLQENVPWQSETFPSIAEALIDSKSA------- 663
Query: 648 FKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDS 707
E TWL QG D K ++A +A VFGS N + +
Sbjct: 664 ----KESNNITWLLMQGNDTIGKRRLALAIAESVFGSTNLLLQFDM-------------- 705
Query: 708 RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
R+ + E A+ + V LIE+V+ AD +K E+G
Sbjct: 706 ---LKRETSIAPFSEMLEGALKTHHQLVMLIENVDFADAQFKKFLCDGFETGNF 756
>gi|359484916|ref|XP_002266859.2| PREDICTED: chaperone protein ClpB-like [Vitis vinifera]
Length = 1060
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 305/892 (34%), Positives = 447/892 (50%), Gaps = 122/892 (13%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA T+L + +G LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLGSPSGFLRQACIRSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLP A +P L P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQNISPGLE-----PPISNALMAALKRAQAHQRRG 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
E QQQPLLAVK+EL+QLIISILDDPSVSRVMREA FSS VK+ +EQ+++ +
Sbjct: 116 CPEQQQQPLLAVKVELQQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPPTPNVS 175
Query: 177 P----VSSNKSKESNVLVLSQTASATKVSKPRVSLDPI-------------RNEDVMYVI 219
P + + + + T + PR+ R E+V V+
Sbjct: 176 PSPIGLGGFRGPGAPTSTPTPTPTRNLYLNPRLQQQGNAATAAAANQSGHQRAEEVKRVV 235
Query: 220 ENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK---GDVPEALRDVKCLPLSIS-SFRH 275
+ L+ +KRN V+VGE + E V++ ++ +IEK GD P L++V+ + L S +
Sbjct: 236 DILLRTKKRNPVLVGE--SEPEAVMKELLRRIEKRDFGDGP--LKNVEVISLHRELSLNN 291
Query: 276 MNRVEVEQRVEEIKNLVRSCLGRG-IVLNLGDLEW-----AEFRASSSEQVRGYYCS--I 327
+R ++ +++E+ LV + +G G I+L+LGDL+W + S V S
Sbjct: 292 SDRTQIPTKLKELGRLVEARIGGGSIILDLGDLKWLVEQPVNLGVAGSGTVGQQVVSEAG 351
Query: 328 EHIIMEIGKLVCGIGE--NARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLS 385
+ E+GKL+ GE N R WL+G AT ++Y+RC+ HPS+E W L + I A +
Sbjct: 352 RAAVAEMGKLLATFGEGSNGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAARTPV 411
Query: 386 LSLIT-------TDSDLQSQSTSKKAESGVSWL---LFEGEEENKQLTCCADCSAKFEAE 435
L + S ++S + K + ++ L + E + ++++CC C +E E
Sbjct: 412 PGLFSRFGTNGILSSSVESLTPMKNFPTAITALPRRVSENMDPAQKMSCCPQCMENYEQE 471
Query: 436 ARSLQSSSCNSDSPT-------SSLPAWLQQYK---NEKKATLSNNDKDSGV------RD 479
L+ S SSLP WL+ K + K T + KD + +D
Sbjct: 472 LGKLEGQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELIWKQKPQD 531
Query: 480 LCKKWNSICNSIHKQPYYSERTLTFSSASPSS-STSGFSYDQQYPNFHKTHRDWAVVEPK 538
L KKWN C +H P + + L +P++ S +G ++ T +PK
Sbjct: 532 LLKKWNDTC--LHLHPNFHQPNLNSERITPTALSMTGL--------YNATLLGRQAFQPK 581
Query: 539 QSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI------ 592
+ S+ ++P + P ++ L R N T++ I
Sbjct: 582 LQPTRNLGETLQLNSNLVANQPCEQAVTPPGSPVRTDLVLGRTKI-NETTTEKIHKEHVK 640
Query: 593 -----MEMEYVHKFKELNSENLT--------SLCNALEKKVPWQKDTVYDIANTVLKCRS 639
+ E ++KF EL ++ L+ L L +KV WQ+D +A TV +C+
Sbjct: 641 DFFQCISSESLNKFHELQNDKLSPLDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKM 700
Query: 640 GTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSST 699
G +R+ + K + WL F G D K+K+A L+ LV G N + I L S
Sbjct: 701 GNGKRRS-----AGSKGDIWLLFTGPDRIGKKKMAAALSELVCGV--NPIMICLGS---- 749
Query: 700 RADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESG 759
R D E N R + + ++R AEAV N V ++ED+++AD Q KRA+E G
Sbjct: 750 RRDDGELDMNFRGK-----TAVDRIAEAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERG 804
Query: 760 RIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
R+V S G EVSLG+ I IL+ ++ S S EEK A++ G
Sbjct: 805 RLVDSHGREVSLGNVIFILTANWLVDNRKSLS-----NSTLLNEEKLASIAG 851
>gi|356550720|ref|XP_003543732.1| PREDICTED: uncharacterized protein LOC100814376 [Glycine max]
Length = 1008
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 293/832 (35%), Positives = 427/832 (51%), Gaps = 149/832 (17%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACL--- 57
MR+G C +QQ LTAEAASV+K ++ LARRRGHAQ+TPLHVA T+L+ LR ACL
Sbjct: 1 MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQLTPLHVAATLLSLRGSSLRRACLKSQ 60
Query: 58 --QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR 115
Q+ HPLQC+ALELCFNVALNRL +T +P++ H Q P++SNAL+AA KRAQAHQRR
Sbjct: 61 PHQTSHHPLQCRALELCFNVALNRL-QTTPSPLI--HTQ-PSLSNALIAALKRAQAHQRR 116
Query: 116 GSIEN-QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI--C 172
G IE+ QQQPLL +K+ELE LIISILDDPSVSRVMREAGFSST VK+N+E + + C
Sbjct: 117 GCIEHQQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSPHSVFQC 176
Query: 173 SQ------STPVSSNKSKESNVLVLSQ------------TASATKVSKPRVSLDPIRN-- 212
S+P S + S+ +N + T+ A+ P + P +N
Sbjct: 177 YNSSGGVFSSPCSPSASENNNHRETATNPTNFRHPHHYLTSYASSEFHPSLLFSPPKNNS 236
Query: 213 -------------EDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA 259
+DV V++ L+ K+K+N V+VG+ L+ EG+V ++ ++E+ +VP+
Sbjct: 237 PVCSITGAASSSKDDVRLVLDILLRKKKKNTVIVGDSLSLTEGLVAELMGRLERSEVPDE 296
Query: 260 LRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLG---RGIVLNLGDLEWAEFRA 314
L+ + IS S M R EVE ++ E+K V S G + +GDL+W A
Sbjct: 297 LKSTHFIKFQISHDSLSCMKRDEVEMKLLELKRKVESIASGGGGGGIFYIGDLKWTVKEA 356
Query: 315 SSSEQVRGY-------YCSIEHIIMEIGKLV--CGIGENARFWLMGIATFQSYMRCKSGH 365
S SE+ G Y ++H++ EIGKL CG NA+ WLM A++Q+YMRC+
Sbjct: 357 SFSEKEEGSPNGEVSGYNPVDHLVSEIGKLFSDCGTSNNAKVWLMATASYQTYMRCQMRQ 416
Query: 366 PSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWL-LFEGEEENKQLTC 424
P LE W+L + IP+G L LSL S L S+ +S V F E+ +L C
Sbjct: 417 PPLEKQWALQAVPIPSGGLGLSL-HAPSVLHSKMIVSHNQSHVPETNPFGNMEQENKLNC 475
Query: 425 CADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKW 484
C +C++ +E EA+ L+ LP WLQ + E ++ KD V+ L +KW
Sbjct: 476 CEECASNYEKEAQFLRPDQ------KKMLPLWLQSHSTE------DSKKDELVQ-LKRKW 522
Query: 485 NSICNSIH--KQP----------YYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDW 532
N +C+ +H KQP Y S +++F++ + STS P F + +
Sbjct: 523 NRLCHCLHQSKQPQNQWSWNHNSYNSPSSISFANNATHGSTSKL-----VPRFQR--QQL 575
Query: 533 AVVEPKQSWREHHFLFSHEASDKSTSEPSL-RLYIPEHKDLKQPLSSNRNSTPNSTSSSD 591
++E F F ++ + +EP L L + K +K L+ + ST D
Sbjct: 576 CIIE---------FNFGNK---REATEPVLDSLESMDGKKVKTILALGNGGSGEST-VGD 622
Query: 592 IME--MEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFK 649
I + ++ H +C L++ VPWQ +TV IA ++ +S K
Sbjct: 623 ITDTTLQQAH------------ICKLLQENVPWQSETVPSIAEALIDSKSA--------K 662
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
++ + TWL QG D K ++A +A VFGS + + +
Sbjct: 663 QNNNI---TWLLVQGNDTIGKRRLALAIAESVFGSTDVLLHFDM---------------- 703
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
R+ + E A+ + V LIE+V+ AD +K E G+
Sbjct: 704 -LKRETSIAPFSEMLEGALKTHHQLVILIENVDFADAQFKKFLSDGFEKGKF 754
>gi|356532692|ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785754 [Glycine max]
Length = 1051
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 238/579 (41%), Positives = 329/579 (56%), Gaps = 73/579 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACL--- 57
MR+G CT+QQ LTAEAASV+K ++ LARRRGHAQVTPLHVA T+L LR ACL
Sbjct: 1 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLTLRASSLRRACLKSQ 60
Query: 58 ---QSHS-HPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQ 113
Q+HS HPLQC+ALELCFNVALNRLP +T P+L H Q P++SNAL+AA KRAQAHQ
Sbjct: 61 PQTQTHSHHPLQCRALELCFNVALNRLP-TTPGPLL--HTQ-PSLSNALIAALKRAQAHQ 116
Query: 114 RRGSIENQQQ----PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ---- 165
RRG IE QQQ PLL +K+ELEQLIISILDDPSVSRVMREAGFSST VKSN+E
Sbjct: 117 RRGCIEQQQQQQQPPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTVVKSNIEDTSSS 176
Query: 166 AVSLEICSQSTPV-----------SSNKSKESNVLV------LSQTASATKVSKPRVSLD 208
A S+ S V +N ++++ L S T+ + + + S+
Sbjct: 177 APSVFYNSSGGGVFSSPGSPSPSEKNNVFRQNHFLAAYTSNEFSSTSPNSSLLLKKASVF 236
Query: 209 PI--------RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEAL 260
PI ED+ V + L+ K+KRN V+VG+ LA EG+V ++ K+E+G+VP+ L
Sbjct: 237 PIIESPPPSSSKEDIKVVFDVLLRKKKRNTVIVGDSLALTEGLVGELMGKLERGEVPDEL 296
Query: 261 RDVKCLPLSIS---SFRHMNRVEVEQRVEEIKNLVRSCL---GRGIVLNLGDLEWAEFRA 314
+ + ++ S R M R EVE + +K V S + G G + +GDL+W
Sbjct: 297 KSTHFIKFQLASPVSLRFMKRDEVEMSLSALKRKVDSVVVSGGGGAIFYVGDLKWTVELG 356
Query: 315 SSSEQVRG-------YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
+S ++ G YY ++H++ EIGKL C + WL+ A++Q+YMRC+ P
Sbjct: 357 TSEKEEGGDVCGYNYYYNPVDHLVAEIGKLFCDSNNTTKVWLLATASYQTYMRCQMRQPP 416
Query: 368 LETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEG-EEENKQLTCCA 426
LET WSL + +P+G L LSL + + S+ + + LF +EE +L CC
Sbjct: 417 LETQWSLQAVPVPSGGLGLSLHASSVHDSKMTISQNPSNMMETKLFSSKKEEQDKLNCCE 476
Query: 427 DCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNS 486
+C++ +E EA+ + LP+WLQ + E + KD + L +KWN
Sbjct: 477 ECASSYEKEAQLFKPGQ------KKLLPSWLQSHTTEA------HQKDE-LAQLKRKWNR 523
Query: 487 ICNSIH--KQPYYSERTLTFSSASPSSSTSGFSYDQQYP 523
+C+ +H KQP + S+ + Y+ YP
Sbjct: 524 LCHCLHQSKQPQNHWSNTLHGNYHSSNGNKIYHYNSSYP 562
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
+C L++ VPWQ +T+ IA ++ +S ++ TWL QG D+ K
Sbjct: 673 ICKLLQENVPWQSETIPSIAEALVDSKS------------AKQSSTTWLLLQGTDSIGKT 720
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
++A+ +A VFGS + + + + K + E S + A A+ ++
Sbjct: 721 RLARAIAESVFGSVDFLLHLDML---------------KNNNKENSADIV---AGALKSH 762
Query: 732 PHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
V LIE ++ AD +K E+ + S +E S G AI IL+
Sbjct: 763 EKVVVLIESLDFADAQFRKFLADGFETAKFGNLSMNEKSSGQAIFILT 810
>gi|356547789|ref|XP_003542291.1| PREDICTED: uncharacterized protein LOC100785122 [Glycine max]
Length = 1036
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 289/853 (33%), Positives = 426/853 (49%), Gaps = 120/853 (14%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA T+LA+ +G LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
SHPLQC+ALELCF+VAL RLP S +T P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTSQNT----SSSMEPPISNALMAALKRAQAHQRRGY 116
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ ST
Sbjct: 117 PEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN---AVPSTV 173
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRV-------SLDPIRNEDVMYVIENLMSKRKRNF 230
S + S V ++ PR+ S R ++V +++ L+ +KRN
Sbjct: 174 NSGLGFRPSAVAPVNSAPGRNLYLNPRLQQQQQQGSTAQHRGDEVKRILDILLRTKKRNP 233
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPE-ALRDVKCLPLSISSFRHMNRVEVEQRVEEIK 289
++VGE + E ++ VI KIE ++ E A + + L ++ ++ R++E+
Sbjct: 234 ILVGE--SEPEAAIKEVIKKIENKELGEGAFANAHVIHLEKE--LPSDKAQIPARLKELG 289
Query: 290 NLVRSCLGR----GIVLNLGDLEW--------AEFRASSSEQVRGYYCSIEHIIMEIGKL 337
+L+ + +G G+ ++LGDL+W + Q + + E+G+L
Sbjct: 290 DLIETRIGNSGCGGVFVDLGDLKWLVEQPVGFGIGGGLGNMQQLTLAEAGRAAVAEMGRL 349
Query: 338 VCGIGEN--ARFWLMGIATFQSYMRCKSGHPSLETLWSLH--PLTIPA------------ 381
V GE R WL+G AT ++Y+RC+ HP++E W L P+T A
Sbjct: 350 VSKFGEGGAGRLWLLGTATCETYLRCQVYHPTMENDWDLQAVPITTRASLPGIFPRLGTN 409
Query: 382 GSLSLSLITTDSDLQSQSTS-----KKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEA 436
G L SL + S L++ ST+ ++A V + CC C E E
Sbjct: 410 GFLGTSLESL-SPLKTLSTTTIPPLRRASENV--------DPAAVSICCPQCMQSCEQEV 460
Query: 437 RSLQSSSCNSDS------PTSSLPAWLQQYKNEK---KATLSNNDKDSGVR----DLCKK 483
+ + SD+ SLP WLQ K K K +++ V+ ++ KK
Sbjct: 461 AEMLKETEKSDTELKSEAAKPSLPQWLQNAKTNKDNGKVMDQAQNQEVNVKKRTQEIQKK 520
Query: 484 WNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
W+ C S+H P + + ++ P+S + Y N + R + +PK +
Sbjct: 521 WHDSCLSLH--PKFHQLNVSTERLVPTSLSMTGLY-----NMNLLGRQF---QPKIPLNK 570
Query: 544 HHFLFSHEASDKSTSEPSLRLY----IPEHKDLKQPLSSNRNSTPNSTSSSDIMEM---- 595
+ +S+ + PS + IP DL + ++TP T I +
Sbjct: 571 NLGTSLQLSSNPTPIHPSEHVVSPQQIPVTTDLVLGQTKPADATPEETHKEGINDFLSCL 630
Query: 596 --EYVHKFKELNSENL------TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGK 647
E KF EL S+ L L L +KV WQ+D +A TV +C+ G +R+
Sbjct: 631 SSESQDKFDELQSKKLLDADSFKKLLKGLTEKVWWQQDAASAVATTVTQCKLGNGKRRS- 689
Query: 648 FKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDS 707
K +TWL F G D K+K+A L+ LV GS N + + RAD D+
Sbjct: 690 -------KGDTWLLFVGPDRIGKKKMAAALSELVSGSTNPII----IPLAQRRADGDSDA 738
Query: 708 RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGD 767
+ R + + ++R AEA+ NP V ++ED+++A+ + +RA+E GR S G
Sbjct: 739 PHLRGK-----TALDRIAEAIRRNPLSVIVLEDIDEANILLRGSIRRAMEQGRFPDSHGR 793
Query: 768 EVSLGDAIVILSC 780
E+SLG+ + IL+
Sbjct: 794 EISLGNVMFILTA 806
>gi|449464332|ref|XP_004149883.1| PREDICTED: uncharacterized protein LOC101218882 [Cucumis sativus]
Length = 1029
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 309/923 (33%), Positives = 465/923 (50%), Gaps = 140/923 (15%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TI Q LT++AA+++ QA+ A RR H Q TP+HVA T+LA+ T LR AC++SH
Sbjct: 1 MRAGLGTILQTLTSDAATILNQAIAEAARRNHGQTTPVHVAATLLASPTAFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
SHPLQC+ALELCF+VAL RLP + + P ISNAL+AA KRAQAHQRRGS
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQNL----SAASEPPISNALMAALKRAQAHQRRGS 116
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI------ 171
E QQPLLAVK+E EQL+ISILDDPSVSR+MREA FSS VK +E++++
Sbjct: 117 SELPQQPLLAVKVEFEQLVISILDDPSVSRIMREASFSSPAVKGIIERSLNSSASVVNSS 176
Query: 172 -----CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKR 226
S S+P S N+S N S ++ +P R E+V +++ L
Sbjct: 177 PIGLRSSHSSP-SPNRSLYLNPRF--HQGSVNQLGRP-------REEEVKRIVDILRRPT 226
Query: 227 KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA-LRDVKCLPLSISSFRHMNRVEVEQRV 285
KRN +VVG+ + + ++ +I K ++ E L + + + L F +R ++ ++
Sbjct: 227 KRNPIVVGD--SETDAMLEEFFRRINKKELSEGSLENAEIIRLE-KEFAS-DREQIPTKL 282
Query: 286 EEIKNLVRSCLGR----GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI 341
+E+++LV S L + I+L+LG+LEW + +SS G + +IGKL+
Sbjct: 283 DELEDLVASQLAKSSSGSIILDLGNLEWLFDQPASSVSEAGRAA-----VQKIGKLLTRF 337
Query: 342 GENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI----PAGSLSLSLITTD---SD 394
N R WL+G AT ++++RC+ HPS+E+ W LH + + P L T + S
Sbjct: 338 --NGRLWLIGTATCETFLRCQIYHPSIESDWDLHVVPVVAKAPRSGLYPRFGTKEILGSP 395
Query: 395 LQSQSTSKKAES-GVSWLLFEGEEEN--KQLTCCADCSAKFEAEARSL-------QSSSC 444
++S S K + +S L E E N ++TCC+ C K+E E L SS
Sbjct: 396 IESLSPLKFFPTPPISQLRNESESLNYGSRITCCSQCMQKYEQELHKLINEESEKSSSGV 455
Query: 445 NSDSPTSSLPAWLQQYKNEK---KATLSNNDKDSGV------RDLCKKWNSICNSIHKQP 495
+DS +S LP WLQ+ K+ ++ S +KD+ + ++L KKWN+ C IH
Sbjct: 456 KTDSNSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTCLQIHPNF 515
Query: 496 YYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDK 555
+ S+ + + ST G Y+Q N K +E +S L + ++
Sbjct: 516 HQSKIFSSTGNMLTGISTMGL-YNQ---NLLKCQPCQPRLELNKSLGRTLQLNMNPQPNQ 571
Query: 556 STSEPSLRL-----------YIPEH--KDLK-QPLSSNRNSTPNSTSSSDIMEMEYVHKF 601
+ S+R IPE KD + L N NS+ + S DI + +
Sbjct: 572 PSDHNSIRTDLILGQEKFSGNIPEQTRKDCTIEFLGQNHNSSKSEMKSLDIQSAKLLGI- 630
Query: 602 KELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLF 661
+ ++ + L KV WQ+D +ANT+ + + G +R+G + K + WL
Sbjct: 631 --TDVDSYKKILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQG-----AGSKGDIWLL 683
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDE--QSCS 719
F G D K K+A ++ LV GS V+I L S RN R D + +
Sbjct: 684 FAGPDKVGKRKMASAISELVSGSI--MVTICLGS-----------QRNGRGLDNNFRGRT 730
Query: 720 YIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+++ AEAV NP V ++E++++AD + KRAIESGR++ S G E+SLG+ I IL+
Sbjct: 731 PLDQIAEAVRKNPFSVIVLENIDEADVLFRGSLKRAIESGRLIDSYGREISLGNIIFILT 790
Query: 780 C--------------------------ESFSSRSRACSPPTKQKSDG-CEEEK-GAAMEG 811
ES+ R +K++ + C EE+ +G
Sbjct: 791 TVWLPDDLKWFSDHNSFGEKELATLAGESWQLRLSLSEKQSKRRGNWLCNEERFTKTRKG 850
Query: 812 TSPSVSLDLNICID-DDSTEDQS 833
T+P + DLN + +D T D S
Sbjct: 851 TNPGLFFDLNEAANAEDDTPDGS 873
>gi|449529860|ref|XP_004171916.1| PREDICTED: uncharacterized protein LOC101223687 [Cucumis sativus]
Length = 1029
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 310/923 (33%), Positives = 464/923 (50%), Gaps = 140/923 (15%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TI Q LT++AA+++ QA+ A RR H Q TP+HVA T+LA+ T LR AC++SH
Sbjct: 1 MRAGLGTILQTLTSDAATILNQAIAEAARRNHGQTTPVHVAATLLASPTAFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
SHPLQC+ALELCF+VAL RLP + + P ISNAL+AA KRAQAHQRRGS
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQNL----SAASEPPISNALMAALKRAQAHQRRGS 116
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI------ 171
E QQPLLAVK+E EQL+ISILDDPSVSR+MREA FSS VK +E++++
Sbjct: 117 SELPQQPLLAVKVEFEQLVISILDDPSVSRIMREASFSSPAVKGIIERSLNSSASVVNSS 176
Query: 172 -----CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKR 226
S S+P S N+S N S ++ KP R E+V +++ L
Sbjct: 177 PIGLRSSHSSP-SPNRSLYLNPRF--HQGSVNQLGKP-------REEEVKRIVDILRRPT 226
Query: 227 KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA-LRDVKCLPLSISSFRHMNRVEVEQRV 285
KRN +VVG+ + + ++ +I K ++ E L + + + L F +R ++ ++
Sbjct: 227 KRNPIVVGD--SETDAMLEEFFRRINKKELSEGSLENAEIIRLE-KEFAS-DREQIPTKL 282
Query: 286 EEIKNLVRSCLGR----GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI 341
+E+++LV S L + I+L+LG+LEW + +SS G + +IGKL+
Sbjct: 283 DELEDLVASQLAKSSSGSIILDLGNLEWLFDQPASSVSEAGRAA-----VQKIGKLLTRF 337
Query: 342 GENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI----PAGSLSLSLITTD---SD 394
N R WL+G AT ++++RC+ HPS+E+ W LH + + P L T + S
Sbjct: 338 --NGRLWLIGTATCETFLRCQIYHPSIESDWDLHVVPVVAKAPRSGLYPRFGTKEILGSP 395
Query: 395 LQSQSTSKKAES-GVSWLLFEGEEEN--KQLTCCADCSAKFEAEARSL-------QSSSC 444
++S S K + +S L E E N +LTCC+ C K+E E L S
Sbjct: 396 IESLSPLKFFPTPPISQLRNESESLNYGSRLTCCSQCMQKYEQELHKLINEESEKSSPGV 455
Query: 445 NSDSPTSSLPAWLQQYKNEK---KATLSNNDKDSGV------RDLCKKWNSICNSIHKQP 495
+DS +S LP WLQ+ K+ ++ S +KD+ + ++L KKWN+ C IH
Sbjct: 456 KTDSNSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTCLQIHPNF 515
Query: 496 YYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDK 555
+ S+ + + ST G Y+Q N K +E +S L + ++
Sbjct: 516 HQSKIFSSTGNMLTGISTMGL-YNQ---NLLKCQPCQPRLELNKSLGRTLQLNMNPQPNQ 571
Query: 556 STSEPSLRL-----------YIPEH--KDLK-QPLSSNRNSTPNSTSSSDIMEMEYVHKF 601
+ S+R IPE KD + L N NS+ + S DI + +
Sbjct: 572 PSDHNSIRTDLILGQEKFSGNIPEQTRKDCTIEFLGQNHNSSKSEMKSLDIQSAKLLGI- 630
Query: 602 KELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLF 661
+ ++ + L KV WQ+D +ANT+ + + G +R+G + K + WL
Sbjct: 631 --TDVDSYKKILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQG-----AGSKGDIWLL 683
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDE--QSCS 719
F G D K K+A ++ LV GS V+I L S RN R D + +
Sbjct: 684 FAGPDKVGKRKMASAISELVSGSI--MVTICLGS-----------QRNGRGLDNNFRGRT 730
Query: 720 YIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+++ AEAV NP V ++E++++AD + KRAIESGR++ S G E+SLG+ I IL+
Sbjct: 731 PLDQIAEAVRKNPFSVIVLENIDEADVLFRGSLKRAIESGRLIDSYGREISLGNIIFILT 790
Query: 780 C--------------------------ESFSSRSRACSPPTKQKSDG-CEEEK-GAAMEG 811
ES+ R +K++ + C EE+ +G
Sbjct: 791 TVWLPDDLKWFSDHNSFGEKELATLAGESWQLRLSLSEKQSKRRGNWLCNEERFTKTRKG 850
Query: 812 TSPSVSLDLNICID-DDSTEDQS 833
T+P + DLN + +D T D S
Sbjct: 851 TNPGLLFDLNEAANAEDDTPDGS 873
>gi|357449635|ref|XP_003595094.1| hypothetical protein MTR_2g038200 [Medicago truncatula]
gi|124359320|gb|ABD28470.2| ATP binding , related [Medicago truncatula]
gi|355484142|gb|AES65345.1| hypothetical protein MTR_2g038200 [Medicago truncatula]
Length = 1020
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 294/854 (34%), Positives = 429/854 (50%), Gaps = 158/854 (18%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACL--- 57
MR+G T+Q+ LTAEAAS++K ++ LARRRGHAQ+TPLHVA T+L+ + LR ACL
Sbjct: 1 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQ 60
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
Q ++HPLQC+ALELCFNVALNRLP +T++P+L P++SNAL+AA KRAQAHQRRG
Sbjct: 61 QQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQ-HVPSLSNALIAALKRAQAHQRRGC 119
Query: 118 IENQQQ----PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL---- 169
IE QQ PLL+VK+EL+QLI+SILDDPSVSRVMREAGFSS VK+N+E + +L
Sbjct: 120 IEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSSTLINSS 179
Query: 170 -EICSQSTPVSSNKSKES----NVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMS 224
S +P+S N S +VL SQ V P + ED+ V + L+
Sbjct: 180 SVFHSSPSPLSHNHFLSSYGYGSVLFSSQKKEQV-VYHPFLKSSESNKEDINLVFDVLLR 238
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRD---VKCLPLSISSFRHMNRVEV 281
K+K+N V+VG+ ++ EG+V ++ + E+G+VP+ ++ VK LS S ++M + EV
Sbjct: 239 KKKKNTVIVGDTVSLTEGLVSEIMKRFERGEVPDEMKTTHFVKFHGLSSVSLKYMKKEEV 298
Query: 282 EQRVEEIKNLVRS-----CLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGK 336
E V I+ L R LG G + +GDL+W S + +++++ EIGK
Sbjct: 299 EMNV--IRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKEV---VDYVVEEIGK 353
Query: 337 LVCGIG-ENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITT---- 391
L G +N + WL+ A++QSYMRC+ P+ E W L + +P+G L LSL ++
Sbjct: 354 LFGEEGNKNGKIWLVATASYQSYMRCQMRVPTFENQWCLQAVPVPSGGLGLSLHSSRRHC 413
Query: 392 ----------DSDLQ-SQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQ 440
DS + SQ+ S ES F +EE+++L CC +C + +E EA+ +
Sbjct: 414 EKHCWLVSVHDSKMSISQNPSPMLESK----FFSNKEEHEKLNCCEECVSNYEKEAQLFK 469
Query: 441 SSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIH--KQPYYS 498
N LP+WLQ + E + KD + L KKWN +C +H KQP
Sbjct: 470 PDQKN------LLPSWLQSHSTEAR------QKDE-LTQLNKKWNRLCQCLHQNKQPQ-- 514
Query: 499 ERTLTFSSASPSSSTSGFSYDQQYPNFHK----------THRDWAVVEPKQSWREH---- 544
S + SS+ + Y+ YP + + +A K ++ +
Sbjct: 515 ----NHWSNNHSSNAKIYPYNSSYPYWPNQGSSILPDTSSSISFADSATKPAYSSNLIPR 570
Query: 545 ----------HFLFSHEASDKSTSEPSLRL----YIPEHKDLKQPLSSNRNSTPNSTSSS 590
F F+ E + K+ +L L + K++K L+ NST S S
Sbjct: 571 FRRGQQSCTIEFNFNDEKAQKNQVTATLELDSLKGMEGTKEVKTTLALG-NST---FSVS 626
Query: 591 DIMEMEYVHKFKELNSENLT----SLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKG 646
D M ENLT + L++ +PW +TV IA ++ +S
Sbjct: 627 DQKRM-----------ENLTLQRDHIYKVLQENIPWHCETVSSIAEALVDSKSS------ 669
Query: 647 KFKDHSEVKE-ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE 705
KE TWLF QG D+ K+++A +A VFGS F + +
Sbjct: 670 --------KECATWLFLQGNDSVGKKRLALAIAESVFGSVEMFSHVDM------------ 709
Query: 706 DSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSS 765
R+ + E+ + NN V L+E+ + D +K E + T
Sbjct: 710 -----MKRENSETPFSEKVVGPLKNNEKFVVLVENADFGDTLIRKMLADEFEIAKFGT-- 762
Query: 766 GDEVSLGDAIVILS 779
LG I ILS
Sbjct: 763 -----LGQKIFILS 771
>gi|356562493|ref|XP_003549505.1| PREDICTED: uncharacterized protein LOC100809965 [Glycine max]
Length = 1034
Score = 371 bits (952), Expect = e-99, Method: Compositional matrix adjust.
Identities = 288/852 (33%), Positives = 422/852 (49%), Gaps = 121/852 (14%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA T+LA+ +G LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
SHPLQC+ALELCF+VAL RLP S +T G P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTSQNT----GSSMEPPISNALMAALKRAQAHQRRGY 116
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ + P
Sbjct: 117 PEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN------AVP 170
Query: 178 VSSNKS---KESNVLVLSQTASATKVSKPRV----SLDPIRNEDVMYVIENLMSKRKRNF 230
+ N + S V ++ PR+ S R ++V +++ L +KRN
Sbjct: 171 ATVNSGLGFRPSAVAPVNSAPGRNLYLNPRLQQQGSAAQHRGDEVKRILDILHRTKKRNP 230
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPE---ALRDVKCLPLSISSFRHMNRVEVEQRVEE 287
++VGE + E ++ VI KIE ++ E A V L + S ++ ++ R++E
Sbjct: 231 ILVGE--SEPEAAIKEVIKKIENKELGEGGFANAHVIHLEKELPS----DKAQIPARLQE 284
Query: 288 IKNLVRSCLGR----GIVLNLGDLEW--------AEFRASSSEQVRGYYCSIEHIIMEIG 335
+ +L+ S +G G+ ++LGDL+W + Q + + EIG
Sbjct: 285 LGDLIESRIGNSGCGGVFVDLGDLKWLVEQPVGFGVGGGLGNMQQLTLAEAGRAAVAEIG 344
Query: 336 KLVCGIGEN--ARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI----PAGSLSLSLI 389
+LV GE R WL+G AT ++Y+RC+ HP++E W L + I P + L
Sbjct: 345 RLVSKFGEGGAGRLWLLGTATCETYLRCQVYHPTMENDWDLQAVPITSRAPLPGIFPRLG 404
Query: 390 TT---DSDLQSQSTSKKAESGVSWLLFEGEEE---NKQLTCCADCSAKFEAEARSLQSSS 443
T + L+S K + L E + CC C E E + +
Sbjct: 405 TNGILGTSLESLLPLKTLSTTTIPSLRRASENIDPSAVSICCPQCMQSCEQEVAEMLEET 464
Query: 444 CNSDS------PTSSLPAWLQQYK-NEKKATLSNNDKDSGV------RDLCKKWNSICNS 490
SD+ SLP WLQ K N + + ++ V +++ KKW+ C S
Sbjct: 465 KKSDTELKSEAAKPSLPQWLQNAKTNNDNGKVMDQAQNQEVNVKKRTKEIQKKWHDSCLS 524
Query: 491 IHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSH 550
+H P + + ++ + P+ + Y N + R + +PK R + S
Sbjct: 525 LH--PKFHQLNVSTETLVPTPLSMTGLY-----NMNLLGRQF---QPK-ILRNKNLGTSL 573
Query: 551 EASDKSTSEPSLRLYIPEHK----------DLKQPLSSNRNSTPNSTSSSDIMEM----- 595
+ S T ++ PEH DL + ++ P T I +
Sbjct: 574 QLSSNPTP-----IHPPEHAVSPKQMPVTTDLVLGQTKPADAVPEETHKEGINDFLSCLS 628
Query: 596 -EYVHKFKELNSENLTS------LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKF 648
E KF EL S+ L L L +KV WQ+D +A+TV +C+ G +R+
Sbjct: 629 SESQDKFDELQSKKLIDADSFKKLLKGLTEKVWWQQDAASAVASTVTQCKLGNGKRRS-- 686
Query: 649 KDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSR 708
K +TWL F G D K+K+A L+ L GS N + I L+ DS D+
Sbjct: 687 ------KGDTWLLFVGPDRIGKKKMAAALSELASGS--NPIIIPLAQRRGDAGDS--DAP 736
Query: 709 NKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ R + + ++R AEA+ NP V ++ED+++A+ + +RA+E GR S G E
Sbjct: 737 HLRGK-----TALDRIAEAIRRNPLSVIVLEDIDEANILLRGSIRRAMEQGRFPDSHGRE 791
Query: 769 VSLGDAIVILSC 780
+SLG+ + IL+
Sbjct: 792 ISLGNVMFILTA 803
>gi|15242850|ref|NP_200579.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|9759268|dbj|BAB09589.1| 101 kDa heat shock protein; HSP101-like protein [Arabidopsis
thaliana]
gi|332009558|gb|AED96941.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 990
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 286/841 (34%), Positives = 424/841 (50%), Gaps = 138/841 (16%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAA+V+ Q++ A RR H Q TPLHVA T+LA+ G LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAATVLNQSIAEAARRNHGQTTPLHVAATLLASPAGFLRRACIRSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
SHPLQC+ALELCF+VAL RLP +T+TP P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTATTTP-----GNDPPISNALMAALKRAQAHQRRGC 115
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ SL TP
Sbjct: 116 PEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQ--SLNNSVTPTP 173
Query: 178 VSSNKSKESNVLV---------------LSQTASATK--VSKPRVSLDPIRNEDVMYVIE 220
+ S S N L Q AS+ + VSK N+DV V++
Sbjct: 174 IPSVSSVGLNFRPGGGGPMTRNSYLNPRLQQNASSVQSGVSK---------NDDVERVMD 224
Query: 221 NLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPE-ALRDVKCLPL-SISSFRHMNR 278
L +K+N V+VG+ + V+R ++ KIE G+V A+++ K + L ISS + +
Sbjct: 225 ILGRAKKKNPVLVGD--SEPGRVIREILKKIEVGEVGNLAVKNSKVVSLEEISSDKAL-- 280
Query: 279 VEVEQRVEEIKNLVRSCL-------GRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHI- 330
R++E+ L+++ L G G++L+LGDL+W + SS++ I
Sbjct: 281 -----RIKELDGLLQTRLKNSDPIGGGGVILDLGDLKWLVEQPSSTQPPATVAVEIGRTA 335
Query: 331 IMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT 390
++E+ +L+ R W +G AT ++Y+RC+ HPS+ET W L +++ A + + +
Sbjct: 336 VVELRRLLEKF--EGRLWFIGTATCETYLRCQVYHPSVETDWDLQAVSVAAKAPASGVFP 393
Query: 391 -TDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFE---AEARSLQSSSCNS 446
++L+S + K N+ L CC C +E AE S+ S S
Sbjct: 394 RLANNLESFTPLKSFVPA-----------NRTLKCCPQCLQSYERELAEIDSVSSPEVKS 442
Query: 447 D-SPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFS 505
+ + LP WL KA + + + ++ KKWN C +H + +
Sbjct: 443 EVAQPKQLPQWLL------KAKPVDRLPQAKIEEVQKKWNDACVRLHPSFHNKNERIVPI 496
Query: 506 SASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREH-HF-----LFSHEASDKSTSE 559
+ +TS +S PN ++P + RE H L + +A KS
Sbjct: 497 PVPITLTTSPYS-----PNMLLRQPLQPKLQPNRELRERVHLKPMSPLVAEQAKKKS--- 548
Query: 560 PSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYV-----------HKFKELNSEN 608
P ++ L R +S + D+ +++ + L EN
Sbjct: 549 -------PPGSPVQTDLVLGRAE--DSEKAGDVQVRDFLGCISSESVQNNNNISVLQKEN 599
Query: 609 LTS---------LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETW 659
L + L + +KV WQ D +A TV +C+ G +R+G K + W
Sbjct: 600 LGNSLDIDLFKKLLKGMTEKVWWQNDAAAAVAATVSQCKLGNGKRRGVLS-----KGDVW 654
Query: 660 LFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCS 719
L F G D K K+ L+ LV+G+ N + I L S R D+ + + + R + +
Sbjct: 655 LLFSGPDRVGKRKMVSALSSLVYGT--NPIMIQLGS----RQDAGDGNSSFRGK-----T 703
Query: 720 YIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+++ AE V +P V L+ED+++AD + K+A++ GRI S G E+SLG+ I +++
Sbjct: 704 ALDKIAETVKRSPFSVILLEDIDEADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMT 763
Query: 780 C 780
Sbjct: 764 A 764
>gi|224097580|ref|XP_002310995.1| predicted protein [Populus trichocarpa]
gi|222850815|gb|EEE88362.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/478 (47%), Positives = 302/478 (63%), Gaps = 38/478 (7%)
Query: 393 SDLQS-QSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPT- 450
SD QS QS SK + +G SW L E +N TC D S KF E++SL + N +S T
Sbjct: 269 SDSQSHQSRSKVSMNGSSWPLLECGVDNHS-TCWTDNSVKFNRESQSLAGRTQNKESTTG 327
Query: 451 ------SSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTF 504
SSLP WLQQ K E + + NDK+ L K + + S+HKQ YY E+T+ F
Sbjct: 328 ITISTGSSLPLWLQQCKEETERN-TTNDKEY----LSNKGSLLFGSVHKQSYYPEKTIKF 382
Query: 505 SSASPSSSTSGFSYDQQYPNFHKTHRDWAVV-EPKQSWREHHFLFS------HEASDKST 557
AS S + S ++ + +TH W V+ E KQ +++ S +E S ++
Sbjct: 383 --ASSPPSPNSVSSHERNTDSQQTHLSWPVIFEHKQLEKQNQIWISECSNEGYENSLRNG 440
Query: 558 SEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALE 617
+P L LS+ +S +++SS + +ME V FKE N NL +L + LE
Sbjct: 441 PKPDL-------------LSNPNSSPNSASSSEAMDDMEGVQSFKEFNDYNLKNLRSGLE 487
Query: 618 KKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKEL 677
KKVPWQKD + +IA T+L+CRSG +RKGK +H E K ETWLFF GVD + KEKIA+EL
Sbjct: 488 KKVPWQKDIIPEIATTILECRSGMRKRKGKL-NHIENKAETWLFFLGVDFEGKEKIAREL 546
Query: 678 ARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFL 737
ARLVFGS +NFVSI LS+FSS+RADSTE+S+NKR+RDE CSY+ER A++ N HRVF
Sbjct: 547 ARLVFGSQSNFVSIGLSNFSSSRADSTEESKNKRARDELGCSYLERLGLALNENSHRVFF 606
Query: 738 IEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQK 797
+EDV+ D CSQKG K+AIE+G + G+ V L DAI++ SCESFSS SRACSPP +QK
Sbjct: 607 MEDVDGVDNCSQKGIKQAIENGSVTLPDGENVPLKDAIIVFSCESFSSVSRACSPPRRQK 666
Query: 798 -SDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFKIMEL 854
SD ++E ME SP +SLDLNI + D+ ++ S+ + G+LESVD+++IFKI EL
Sbjct: 667 TSDHGDKEDEGGMEDKSPVLSLDLNISFEGDNGDEYSLAENGILESVDRQVIFKIQEL 724
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/273 (68%), Positives = 222/273 (81%), Gaps = 15/273 (5%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG C++QQ LT EA S+VKQA++LARRRGHAQVTPLHVA+TMLA+STGLLR ACLQ+H
Sbjct: 1 MRAGICSVQQTLTPEAVSLVKQAVSLARRRGHAQVTPLHVASTMLASSTGLLRRACLQAH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
SHPLQCKALELCFNVALNRLPASTS+ +LG H +P++SNALVAAFKRAQAHQRRGSIEN
Sbjct: 61 SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRGSIEN 120
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
QQQP+LA+KIE+EQLIISILDDPSVSRVMREAGFSSTQVK+ VEQAVSLEIC QS+ S
Sbjct: 121 QQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQAVSLEICPQSSVTVS 180
Query: 181 NKSKESNVLVLSQTASATKVSKP----------RVSLDPIRNEDVMYVIENLMSKRKRNF 230
++SKE + Q SA+ V +P LD +RN+DVM V+ N + ++KRN
Sbjct: 181 SQSKE---ITKPQVLSAS-VPQPLPLSQFGIIHGKPLDQVRNDDVMSVL-NALVRKKRNT 235
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
V+ GECLA+ E VVRGV+DK+E+G+ LR V
Sbjct: 236 VITGECLATAESVVRGVMDKVERGEASGDLRSV 268
>gi|449465230|ref|XP_004150331.1| PREDICTED: uncharacterized protein LOC101218254 [Cucumis sativus]
Length = 1055
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 282/856 (32%), Positives = 427/856 (49%), Gaps = 111/856 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA T+L++ TG LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLSSPTGFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLP A ++P G P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQNASP--GAE---PPISNALMAALKRAQAHQRRG 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ + S+
Sbjct: 116 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPAPASSS 175
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
P+ + S V ++ + P+ R E+V V + L+ +KRN V+VG
Sbjct: 176 PIGGLGFRPSPVGPPRNLYLNPRLQQQGSVAPPVQQRGEEVRKVFDILLRSKKRNPVLVG 235
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEA-LRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVR 293
E + E VV+ ++ +IE ++ + L +V+ + +R+++ R++E+ +LV
Sbjct: 236 E--SEPEAVVKELLRRIENRELGDGTLGNVQVIHFD-KEICSSDRLQIGGRLKELGDLVE 292
Query: 294 SCLGR-----GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHI--------IMEIGKLVC- 339
S + + GI+L++GDL+W + ++ G + + +ME+GKL+
Sbjct: 293 SRMEKLNGSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQVVSEGGRAAVMEMGKLLAK 352
Query: 340 -GIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI----PAGSLSLSLITT--- 391
G G +R WL+G AT ++Y+RC+ H S+E W L + I P L L TT
Sbjct: 353 YGNGGGSRLWLIGTATCETYLRCQVYHASMENDWDLQAVPIAARAPLPGLFPRLGTTGIL 412
Query: 392 DSDLQSQSTSKKAES----GVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSD 447
+S ++S S+ K + + L+ E + +++ +CC+ C +E E ++ +
Sbjct: 413 NSPVESLSSIKGFPTISTIPMRPLMHENLDSSRKSSCCSQCMQNYERELEKFVANELDKP 472
Query: 448 S--------PTSSLPAWLQQYKNE-----KKATLSNNDKD----SGVRDLCKKWNSICNS 490
S S+LP WLQ K + K T N DK+ ++L KKW C
Sbjct: 473 SSVTKPEGAKASALPPWLQNAKAQDEDAKKHETTDNLDKELMRKQKAQELQKKWQDTCLR 532
Query: 491 IHKQPY--------------------YSERTLTFSSASPS-SSTSGFSYDQQYPN----- 524
+H + YS L + P GF Q
Sbjct: 533 LHPNFHNLNKFGLERTAPVSLPLTGLYSPNLLGHQPSQPKLQLNKGFGETLQLKTNPLLA 592
Query: 525 FHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTP 584
+ + +++ P R L S+ E + KDL +SS +
Sbjct: 593 SKPSEKVASILRPGSPVRTELALGRKNDSEILAEE----THKERVKDLLGCISSGPENKV 648
Query: 585 NSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR 644
SS +E + +K L + +KV WQ++ +A +V + + G +R
Sbjct: 649 CELRSSKFIETSDIDSYKR--------LLKGILEKVWWQQEAASALATSVTQFKLGNGKR 700
Query: 645 KGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADST 704
+G K + WL F G D K+K+A LA LV GS N ++I L S + +S
Sbjct: 701 RGTVP-----KGDMWLLFLGPDRVGKKKMATALAELVSGS--NPITICLGSKRKSDGESE 753
Query: 705 EDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
R + + ++R +EA+ N V +++D +++D + +RA+E GR S
Sbjct: 754 ISIRGR--------TVLDRISEAIRRNRFSVIVLDDFDESDLLVRGSIRRAMERGRFTDS 805
Query: 765 SGDEVSLGDAIVILSC 780
G E+SLG+ I IL+
Sbjct: 806 HGREISLGNIIFILTA 821
>gi|449506714|ref|XP_004162827.1| PREDICTED: uncharacterized LOC101218254 [Cucumis sativus]
Length = 1055
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 282/856 (32%), Positives = 427/856 (49%), Gaps = 111/856 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA T+L++ TG LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLSSPTGFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLP A ++P G P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQNASP--GAE---PPISNALMAALKRAQAHQRRG 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ + S+
Sbjct: 116 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPAPASSS 175
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
P+ + S V ++ + P+ R E+V V + L+ +KRN V+VG
Sbjct: 176 PIGGLGFRPSPVGPPRNLYLNPRLQQQGSVAPPVQQRGEEVRKVFDILLRSKKRNPVLVG 235
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEA-LRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVR 293
E + E VV+ ++ +IE ++ + L +V+ + +R+++ R++E+ +LV
Sbjct: 236 E--SEPEAVVKELLRRIENRELGDGTLGNVQVIHFD-KEICSSDRLQIGGRLKELGDLVE 292
Query: 294 SCLGR-----GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHI--------IMEIGKLVC- 339
S + + GI+L++GDL+W + ++ G + + +ME+GKL+
Sbjct: 293 SRMEKLNGSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQVVSEGGRAAVMEMGKLLAK 352
Query: 340 -GIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI----PAGSLSLSLITT--- 391
G G +R WL+G AT ++Y+RC+ H S+E W L + I P L L TT
Sbjct: 353 YGNGGGSRLWLIGTATCETYLRCQVYHASMENDWDLQAVPIAARAPLPGLFPRLGTTGIL 412
Query: 392 DSDLQSQSTSKKAES----GVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSD 447
+S ++S S+ K + + L+ E + +++ +CC+ C +E E ++ +
Sbjct: 413 NSPVESLSSIKGFPTISTIPMRPLMHENLDSSRKSSCCSQCMQNYERELEKFVANELDKP 472
Query: 448 S--------PTSSLPAWLQQYKNE-----KKATLSNNDKD----SGVRDLCKKWNSICNS 490
S S+LP WLQ K + K T N DK+ ++L KKW C
Sbjct: 473 SSVTKPEGAKASALPPWLQNAKAQDEDAKKHETTDNLDKELMRKQKAQELQKKWQDTCLR 532
Query: 491 IHKQPY--------------------YSERTLTFSSASPS-SSTSGFSYDQQYPN----- 524
+H + YS L + P GF Q
Sbjct: 533 LHPNFHNLNKFGLERTAPVSLPLTGLYSPNLLGHQPSQPKLQLNKGFGETLQLKTNPLLA 592
Query: 525 FHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTP 584
+ + +++ P R L S+ E + KDL +SS +
Sbjct: 593 SKPSEKVASILRPGSPVRTELALGRKNDSEILAEE----THKERVKDLLGCISSGPENKV 648
Query: 585 NSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR 644
SS +E + +K L + +KV WQ++ +A +V + + G +R
Sbjct: 649 CELRSSKFIETSDIDSYKR--------LLKGILEKVWWQQEAASALATSVTQFKLGNGKR 700
Query: 645 KGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADST 704
+G K + WL F G D K+K+A LA LV GS N ++I L S + +S
Sbjct: 701 RGTVP-----KGDMWLLFLGPDRVGKKKMATALAELVSGS--NPITICLGSKRKSDGESE 753
Query: 705 EDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
R + + ++R +EA+ N V +++D +++D + +RA+E GR S
Sbjct: 754 ISIRGR--------TVLDRISEAIRRNRFSVIVLDDFDESDLLVRGSIRRAMERGRFTDS 805
Query: 765 SGDEVSLGDAIVILSC 780
G E+SLG+ I IL+
Sbjct: 806 HGREISLGNIIFILTA 821
>gi|357479855|ref|XP_003610213.1| Chaperone protein clpB [Medicago truncatula]
gi|355511268|gb|AES92410.1| Chaperone protein clpB [Medicago truncatula]
Length = 1025
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 286/849 (33%), Positives = 422/849 (49%), Gaps = 123/849 (14%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA T+LA+ +G LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLP----ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQ 113
SHPLQC+ALELCF+VAL RLP AS+++ M P ISNAL+AA KRAQAHQ
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTSQNASSTSAM------EPPISNALMAALKRAQAHQ 114
Query: 114 RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICS 173
RRG E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ +
Sbjct: 115 RRGYPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLN-SVAP 173
Query: 174 QSTPVSSNKSKESNVLVLSQTASATK--VSKPRVSLD--------PIRNEDVMYVIENLM 223
V+SN +++ A+ T+ PR+ + ++V V+E LM
Sbjct: 174 SPVTVNSNPMMGFRPGMVTPGAAPTRNLYMNPRLQQQGGAAALSGAHKGDEVKRVVEILM 233
Query: 224 SKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQ 283
+KRN V+VGE + E +R V+ KIE ++ E + + + +R ++
Sbjct: 234 RTKKRNPVLVGE--SEPEAAIREVLKKIENKELGEGVFS-NAHAIYLEKELPSDRGQIPV 290
Query: 284 RVEEIKNLVRSCLGR-----GIVLNLGDLEW-----AEFRASSSEQVRGYYCSIEHIIME 333
R++E+ +L+ S LG G+ +NLGDL+W F + +Q + + E
Sbjct: 291 RIKELGDLIESRLGNSGSCGGVFINLGDLKWLVEQPVGFGLGNMQQP-ALAEAGRAAVAE 349
Query: 334 IGKLVCGIGEN--ARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI----PAGSLSLS 387
+G+LV GE + WL+G AT ++Y+RC+ HPS+E W L + I P +
Sbjct: 350 MGRLVAKFGEGGVGKLWLLGTATCETYLRCQVYHPSMENDWDLQAVPITTRSPLPGMFPR 409
Query: 388 LITT---DSDLQSQSTSKKAESGVSWLLFEGEEE-----NKQLTCCADCSAKFEAEARSL 439
L T + L+S S K L E TCC C E E +
Sbjct: 410 LGTNGILGTTLESLSPLKTLTPTPITPLTRASENVDPAAAAAPTCCPQCMRSCEQEIADM 469
Query: 440 QSSSCNSDS---PTSS---LPAWLQQYK-NEKKATLSNNDKDSG--------VRDLCKKW 484
+ SDS P ++ LP WLQ + N A + + + +G +++ KKW
Sbjct: 470 LKETEKSDSELKPDATRPPLPQWLQNARTNNDNAKVMDQAQSNGQEGNVKKRTQEIQKKW 529
Query: 485 NSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDW-AVVEPKQSWRE 543
+ C ++H P + ++ ++ P+ FS Y N + R + V+P ++
Sbjct: 530 HDSCLNLH--PKFHQQNVSTERIVPTP----FSMTNLY-NVNLLGRQFQPKVQPNKNLGC 582
Query: 544 HHFLFS---------HEASD-KSTSEPSLRLYIPEHKDLKQPLSSNR---NSTPNSTSSS 590
L S H AS KST L L + D P S+R N +S SS
Sbjct: 583 SLQLSSIPIPIQQSEHTASPRKSTVTTELVLGQTKPSD-TIPEESHRERINDFLSSLSSE 641
Query: 591 DIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD 650
+ + +H K ++++ L L +KV WQ+D IA V +C+ G
Sbjct: 642 SQDKFDELHSKKLFDTDSFKRLLKTLTEKVWWQQDAASAIATAVTQCKLGP--------- 692
Query: 651 HSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNK 710
D K+++A L+ LV GS+ +S+A R D ++
Sbjct: 693 ---------------DRIGKKRMAAALSELVSGSNPIVISLA-----QRRGDGDSNAHQF 732
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
R + + ++R E + NPH V ++ED+++A+ + KRA+E GR S G E+S
Sbjct: 733 RGK-----TVLDRIVETIRRNPHSVIMLEDIDEANTLLRGNIKRAMEQGRFPDSHGREIS 787
Query: 771 LGDAIVILS 779
LG+ + IL+
Sbjct: 788 LGNVMFILT 796
>gi|193870826|gb|ACF23000.1| heat shock-like protein [Arabidopsis thaliana]
Length = 1017
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 287/852 (33%), Positives = 428/852 (50%), Gaps = 126/852 (14%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS-TGLLRTACLQS 59
MR G T Q LT EAASV+KQ++TLARRRGH+QVTPLHVA+T+L +S + L R ACL+S
Sbjct: 1 MRTGAYTAHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSRSNLFRRACLKS 60
Query: 60 H---------SHP-LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA 109
+ +HP L C+ALELCFNV+LNRLP + P+ P++SNALVAA KRA
Sbjct: 61 NPFTALGRQMAHPSLHCRALELCFNVSLNRLP-TNPNPLFQTQ---PSLSNALVAALKRA 116
Query: 110 QAHQRRGSIENQQQ----PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ 165
QAHQRRG +E QQ P LAVK+ELEQL++SILDDPSVSRVMREAG SS VKSN+E
Sbjct: 117 QAHQRRGCVEQQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSVKSNIED 176
Query: 166 AVSL------------------------EICSQSTPVSSNKSKESNVLVLSQTA------ 195
S+ E +S N SK + + + +
Sbjct: 177 DSSVVSPVFYGSSSSVGVFSSPCSPSSSENNQGGGTLSPNPSKIWHAHLTNHHSFEQNPF 236
Query: 196 ---SATKVSKPRVSLDPIRNEDVMYVIENLMSKR---KRNFVVVGECLASIEGVVRGVID 249
K P + P+R ED VIE L+ K+ KRN V+VG+ ++ EGVV ++
Sbjct: 237 FHFPKGKTFTPDQAF-PVR-EDANPVIEVLLGKKNNKKRNTVIVGDSVSLTEGVVAKLMG 294
Query: 250 KIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCL---GRGIVLNL 304
+IE+G+VP+ L+ + S M + ++E +V E+K + S G+G+++ L
Sbjct: 295 RIERGEVPDDLKQTHFIKFQFSQVGLNFMKKEDIEGQVRELKRKIDSFTSWGGKGVIVCL 354
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGE-NARFWLMGIATFQSYMRCKS 363
GDL+WA + + Y + +H++ EIG+LV A+ WL+G A++Q+YMRC+
Sbjct: 355 GDLDWAVW-GGGNSASSSNYSAADHLVEEIGRLVYDYSNTGAKVWLLGTASYQTYMRCQM 413
Query: 364 GHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTS------KKAESGVSWLLFEGEE 417
P L+ W+L ++IP+G LSL+L + S++ SQ KK + G E+
Sbjct: 414 KQPPLDVHWALQAVSIPSGGLSLTLHASSSEMASQVMEMKPFRVKKEKKGA-----REEK 468
Query: 418 ENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGV 477
E +L C +C+ +E EA++ S+ LP WLQ + + ++ D+ SG+
Sbjct: 469 EEDKLNFCGECAFNYEKEAKAFISAQ------HKILPPWLQPHGDNN--NINQKDELSGL 520
Query: 478 RDLCKKWNSICNSI-HKQPYYSERTLTFSSASPSSST-SGFSYDQQYPNFHKTHRDWAVV 535
R KKWN C ++ HK+P ++T A SSS G D + A
Sbjct: 521 R---KKWNRFCQALHHKKP-----SMTAWRAEQSSSVLPGSLMDSSLKQNSRASSSVAKF 572
Query: 536 EPKQSWR-EHHFLFSHEASDKSTSEPSLRLYIPEHKD-LKQPLSSNRNSTPNSTSSSDIM 593
+ S E F + + K T E SL + + + +K ++ +P + S +
Sbjct: 573 RRQNSCTIEFSFGSNRQEGLKKTDELSLDGFKSNNDEGVKTKITLALGHSPFPSDSENSE 632
Query: 594 EMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE 653
E E K ++ L L + +PWQKD + I + + + R+
Sbjct: 633 EEEPEKAIK------MSKLLEKLHENIPWQKDVLPSIVEAMEESVKRSKRK--------- 677
Query: 654 VKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR 713
+ W+ G D AK ++A L +FGSH N + I L +S +++ E+ +N +
Sbjct: 678 ---DAWMLVSGNDVTAKRRLAITLTTSLFGSHENMLKINLR--TSKASEACEELKNALKK 732
Query: 714 DEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
E+ IER A+A N L++ E D +G K I ++T DE
Sbjct: 733 KEEVVILIERVDLADAQFMN----ILVDRFEAGDLDGFQGKKSQIIF--LLTREDDECVE 786
Query: 772 GDAIVI---LSC 780
+ VI L+C
Sbjct: 787 NEHFVIPMVLNC 798
>gi|341605679|gb|AEK84225.1| heat shock protein-related protein [Cucurbita maxima]
Length = 782
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 286/812 (35%), Positives = 412/812 (50%), Gaps = 137/812 (16%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG---LLRTACL 57
MR+G C QQ LT EAASV+K +++LA RRGH+ VTPLHVA+T+L+ ++ LLR ACL
Sbjct: 1 MRSGTCAAQQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSNNSKPPTLLRRACL 60
Query: 58 QSHS-HPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
+SH HPLQ +ALELCFNVALNRLP +S P+L P++SNAL+AA KRAQAHQRRG
Sbjct: 61 KSHPPHPLQSRALELCFNVALNRLP--SSPPLLHSP---PSLSNALIAALKRAQAHQRRG 115
Query: 117 SIENQQQ-----------PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ 165
S + PLL VK+EL+ LIISILDDPSVSRVMREAGFSST VK+N+E+
Sbjct: 116 SSSSSSSLDHHHQQQQQHPLLTVKVELQHLIISILDDPSVSRVMREAGFSSTAVKTNIEE 175
Query: 166 AVSLE------ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVM-YV 218
S +P+SS+ +QT S T S P D V
Sbjct: 176 YNDNNNNNNTIFISPPSPISSH-------FFSAQTNSYTPFFFSSSSPPPPPTTDATKLV 228
Query: 219 IENLMSKR----KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK---CLPLSIS 271
E + K + N VVVG+ + EGVV V+ K++ G+VPEA++ VK LPL
Sbjct: 229 FEAFLGKNNNNLRTNVVVVGDSVGLTEGVVFEVMRKVKMGEVPEAMKGVKFVEFLPLMKG 288
Query: 272 SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHII 331
S ++ V+ G+++ +GDL+W +S E IE ++
Sbjct: 289 S-----------SSLKLGEYVKDNGDGGVLVYVGDLKWIVEGGNSDE--------IERLV 329
Query: 332 MEIGKLVCGI-------GENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSL 384
EI +L+ G G A+ W+MG+A++Q YMRC+ P+LET WSLH + +P+ L
Sbjct: 330 GEIERLLKGDFLNANNNGSKAKIWVMGMASYQIYMRCQMRQPALETQWSLHAVPVPSSGL 389
Query: 385 SLSLITTD-SDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSS 443
L+L T+ D + S+ E+ F +EE+++LTCCA+C++ FE E + L+S
Sbjct: 390 GLTLHTSSVYDSRPSFFSQTMETKQ----FIAKEEHEKLTCCAECTSNFENEVQHLKSFQ 445
Query: 444 CNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLT 503
+ +P+WLQQY + ++ KD V +L KKWN C+S+ S ++L
Sbjct: 446 ------SKQVPSWLQQYNVNQ-----SHSKDEFV-ELRKKWNRFCSSLSLHRDXSAQSLM 493
Query: 504 FSSASPSSS---------TSGFSY-DQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEAS 553
S S SS ++ S+ D Q P ++ +QS F F + +
Sbjct: 494 GKSFSYCSSYPWWPKIDESNSISFTDNQTPKPLQSSNFVPPFRRQQSCTTIEFDFGNATT 553
Query: 554 DKST---SEPSLR-LYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENL 609
+S S PSL L K++K L+ +S++ S MEME K +
Sbjct: 554 KQSQDRESSPSLNSLKHMVGKEVKITLALGNPLFYDSSAES--MEMESERKTER------ 605
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
+ L++ VPW +++ IA TV+ + R + W+ +G D
Sbjct: 606 GEILKVLQENVPWLSESLPSIAETVISAKKNEKRIQ-------------WILMEGNDFIG 652
Query: 670 KEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVS 729
K K+A +A VFGS F+++ N +S +E S E +A+
Sbjct: 653 KRKMALAIAESVFGSIEFFLNL-----------------NSKS-EEMGISRSEMVEKALK 694
Query: 730 NNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
+ V L+EDVE AD K + ESG+
Sbjct: 695 STRKLVILVEDVEMADSQFMKFLEDGFESGKF 726
>gi|15233760|ref|NP_194721.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
gi|4914416|emb|CAB43667.1| putative protein [Arabidopsis thaliana]
gi|7269891|emb|CAB79750.1| putative protein [Arabidopsis thaliana]
gi|332660293|gb|AEE85693.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
Length = 1017
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 286/847 (33%), Positives = 426/847 (50%), Gaps = 116/847 (13%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS-TGLLRTACLQS 59
MR G T+ Q LT EAASV+KQ++TLARRRGH+QVTPLHVA+T+L +S + L R ACL+S
Sbjct: 1 MRTGAYTVHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSRSNLFRRACLKS 60
Query: 60 H---------SHP-LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA 109
+ +HP L C+ALELCFNV+LNRLP + P+ P++SNALVAA KRA
Sbjct: 61 NPFTALGRQMAHPSLHCRALELCFNVSLNRLP-TNPNPLFQTQ---PSLSNALVAALKRA 116
Query: 110 QAHQRRGSIENQQQ----PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ 165
QAHQRRG +E QQ P LAVK+ELEQL++SILDDPSVSRVMREAG SS VKSN+E
Sbjct: 117 QAHQRRGCVEQQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSVKSNIED 176
Query: 166 AVSL------------------------EICSQSTPVSSNKSKESNVLVLSQTA------ 195
S+ E +S N SK + + + +
Sbjct: 177 DSSVVSPVFYGSSSSVGVFSSPCSPSSSENNQGGGTLSPNPSKIWHAHLTNHHSFEQNPF 236
Query: 196 ---SATKVSKPRVSLDPIRNEDVMYVIENLMSKR---KRNFVVVGECLASIEGVVRGVID 249
K P + P+R ED VIE L+ K+ KRN V+VG+ ++ EGVV ++
Sbjct: 237 FHFPKGKTFTPDQAF-PVR-EDANPVIEVLLGKKNNKKRNTVIVGDSVSLTEGVVAKLMG 294
Query: 250 KIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCL---GRGIVLNL 304
+IE+G+VP+ L+ + S M + ++E +V E+K + S G+G+++ L
Sbjct: 295 RIERGEVPDDLKQTHFIKFQFSQVGLNFMKKEDIEGQVRELKRKIDSFTSWGGKGVIVCL 354
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGE-NARFWLMGIATFQSYMRCKS 363
GDL+WA + + Y + +H++ EIG+LV A+ WL+G A++Q+YMRC+
Sbjct: 355 GDLDWAVW-GGGNSASSSNYSAADHLVEEIGRLVYDYSNTGAKVWLLGTASYQTYMRCQM 413
Query: 364 GHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKA-ESGVSWLLFEGEEENKQL 422
P L+ W+L ++IP+G LSL+L + S++ SQ K EEE +L
Sbjct: 414 KQPPLDVHWALQAVSIPSGGLSLTLHASSSEMASQVMEMKPFRVKEEEEGAREEEEEDKL 473
Query: 423 TCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCK 482
C +C+ +E EA++ S+ LP WLQ + + ++ D+ SG+R K
Sbjct: 474 NFCGECAFNYEKEAKAFISAQ------HKILPPWLQPHGDNN--NINQKDELSGLR---K 522
Query: 483 KWNSICNSI-HKQPYYSERTLTFSSASPSSST-SGFSYDQQYPNFHKTHRDWAVVEPKQS 540
KWN C ++ HK+P ++T A SSS G D + A + S
Sbjct: 523 KWNRFCQALHHKKP-----SMTAWRAEQSSSVLPGSLMDSSLKQNSRASSSVAKFRRQNS 577
Query: 541 WR-EHHFLFSHEASDKSTSEPSLRLYIPEHKD-LKQPLSSNRNSTPNSTSSSDIMEMEYV 598
E F + + K T E SL + + + +K ++ +P + S + E E
Sbjct: 578 CTIEFSFGSNRQEGLKKTDELSLDGFKSNNDEGVKTKITLALGHSPFPSDSENSEEEEPE 637
Query: 599 HKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEET 658
K ++ L L + +PWQKD + I + + + R+ +
Sbjct: 638 KAIK------MSKLLEKLHENIPWQKDVLPSIVEAMEESVKRSKRK------------DA 679
Query: 659 WLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSC 718
W+ G D AK ++A L +FGSH N + I L +S +++ E+ +N + E+
Sbjct: 680 WMLVSGNDVTAKRRLAITLTTSLFGSHENMLKINLR--TSKASEACEELKNALKKKEEVV 737
Query: 719 SYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
IER A+A N L++ E D +G K I ++T DE + V
Sbjct: 738 ILIERVDLADAQFMN----ILVDRFEAGDLDGFQGKKSQIIF--LLTREDDECVENEHFV 791
Query: 777 I---LSC 780
I L+C
Sbjct: 792 IPMVLNC 798
>gi|449457275|ref|XP_004146374.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101213124 [Cucumis sativus]
Length = 1009
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 271/825 (32%), Positives = 421/825 (51%), Gaps = 141/825 (17%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA-STGLLRTACLQS 59
MR+GGC Q T EAASV+KQ+++LARRRGHAQ+TPLHVA T+ ++ S+ LLR ACL+S
Sbjct: 1 MRSGGCAANQTFTPEAASVLKQSLSLARRRGHAQLTPLHVAVTLFSSRSSNLLRQACLKS 60
Query: 60 H----SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR 115
SHPL C+ALELCFNVALNRLP +T P+ G P++SNAL+AA KRAQA+QRR
Sbjct: 61 QPHQTSHPLHCRALELCFNVALNRLP-TTPGPLFHGQ---PSLSNALIAALKRAQANQRR 116
Query: 116 GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAV--SLEIC- 172
G QP+LA+K+ELEQLIISILDDPSVSRVMREAGFSST VKSN+E + S+ C
Sbjct: 117 GC----XQPVLAIKVELEQLIISILDDPSVSRVMREAGFSSTLVKSNLEDSSVSSVFHCY 172
Query: 173 --------SQSTPVSSNK-SKESNVLVLS-----QTASATKVS---------KPRVSLDP 209
S S+P ++ S + + L+ + QT T+ S + RV
Sbjct: 173 GSSGGIFSSPSSPSRTDHHSDQRDNLIFNPGDFWQTQFLTRSSEQNPLPFSPQKRVPNTN 232
Query: 210 IRNE-------DVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRD 262
+ E D+ V E ++ ++++N V++G+ + IEG++ ++ ++ +G+VP L+
Sbjct: 233 VIAESASSLKLDIKLVFEAMLGRKRKNTVIIGDSITMIEGLISELMGRVARGEVPNELKS 292
Query: 263 VKCLP--LSISSFRHMNRVEVEQRVEEIKNLVRSCLGRG--IVLNLGDLEWA-------- 310
K + LS S M R ++E +V E++ + S RG ++ GDL+W
Sbjct: 293 TKFIEFLLSPDSLSSMKREDIEMKVAELRRNIDSITSRGWGAIIYTGDLKWMVETDVRER 352
Query: 311 EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN-ARFWLMGIATFQSYMRCKSGHPSLE 369
E + SS + Y I+H+I EI +L+ + + WL+G A++Q+YMRC+ HP+LE
Sbjct: 353 EETSFSSSKEASSYSQIDHMIEEISRLISFHSISCTKLWLVGTASYQTYMRCQMRHPTLE 412
Query: 370 TLWSLHPLTIPA-GSLSLSLITTDSDLQSQSTSKKAESGVSW---LLFEGEEENKQLTCC 425
T W L + +P+ GSL LSL + S S++T+ W G+E ++L+CC
Sbjct: 413 TRWDLQAVPVPSDGSLGLSLHSF-SLHGSRTTALGHNPSQVWETKPFGIGKEGQEKLSCC 471
Query: 426 ADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQY-------KNEKKATLSNNDKDSGVR 478
DCS+ + E L+SS LP+WLQ + K+++K+T+ +N+ SG
Sbjct: 472 -DCSSNHDKEVHPLKSSQ------QKELPSWLQPFSTQLSHLKSQEKSTMQSNESSSG-S 523
Query: 479 DLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPK 538
+ W++ P+ ++ T+ S + + + K R + +
Sbjct: 524 NFLNTWSN--------PFSTKNTMFQDSNTICFTEPSLKMSRSSNQMLKFRRQQSCIT-- 573
Query: 539 QSWREHHFLFSHEASDKSTSEPSLRLYIPEHK--DLKQPLSSNRNSTPNSTSSSDIMEME 596
E +F + D + S +L+ ++K D+ L + P + ++
Sbjct: 574 ----EFNF---DKYQDATPSLDNLKNMEEDNKEVDISLSLGDSLFKDPKDLTKKSEATIQ 626
Query: 597 YVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKE 656
H LC +L + VPWQ DT+ IA ++ FK +E E
Sbjct: 627 RDH------------LCKSLAENVPWQSDTIPSIAKALM-----------SFKSKNE--E 661
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
W+ +G D K ++A+ +A +FGS I + R ++ E+ +K
Sbjct: 662 LFWILIEGNDKIGKRRLARAIAESIFGSVEQLCKI------NARGNNEENPPSK------ 709
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
+E A+ V L+ED++Q D K +SG+
Sbjct: 710 ---IVE---NAMKTQEKLVVLVEDIDQGDPQFMKFLADGFQSGKF 748
>gi|449503003|ref|XP_004161803.1| PREDICTED: uncharacterized protein LOC101225921 [Cucumis sativus]
Length = 1020
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 272/832 (32%), Positives = 423/832 (50%), Gaps = 144/832 (17%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA-STGLLRTACLQS 59
MR+GGC Q T EAASV+KQ+++LARRRGHAQ+TPLHVA T+ ++ S+ LLR ACL+S
Sbjct: 1 MRSGGCAANQTFTPEAASVLKQSLSLARRRGHAQLTPLHVAVTLFSSRSSNLLRQACLKS 60
Query: 60 H----SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR 115
SHPL C+ALELCFNVALNRLP +T P+ G P++SNAL+AA KRAQA+QRR
Sbjct: 61 QPHQTSHPLHCRALELCFNVALNRLP-TTPGPLFHGQ---PSLSNALIAALKRAQANQRR 116
Query: 116 GSIENQQQ-------PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS 168
G +E QQQ P+LA+K+ELEQLIISILDDPSVSRVMREAGFSST VKSN+E +
Sbjct: 117 GCLEQQQQQQQQQHQPVLAIKVELEQLIISILDDPSVSRVMREAGFSSTLVKSNLEDSSV 176
Query: 169 LEI-----------CSQSTPVSSNK-SKESNVLVLS-----QTASATKVS---------K 202
+ S S+P ++ S + + L+ + QT T+ S +
Sbjct: 177 SSVFHCYGSSGGIFSSPSSPSRTDHHSDQRDNLIFNPGDFWQTQFLTRSSEQNPLPFSPQ 236
Query: 203 PRVSLDPIRNE-------DVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
RV + E D+ V E ++ ++++N V++G+ + IEG++ ++ ++ +G+
Sbjct: 237 KRVPNTNVIAESASSLKLDIKLVFEAMLGRKRKNTVIIGDSITMIEGLISELMGRVARGE 296
Query: 256 VPEALRDVKCLP--LSISSFRHMNRVEVEQRVEEIKNLVRSCLGRG--IVLNLGDLEWA- 310
VP L+ K + LS S M R ++E +V E++ + S RG ++ GDL+W
Sbjct: 297 VPNELKSTKFIEFLLSPDSLSSMKREDIEMKVAELRRNIDSITSRGWGAIIYTGDLKWMV 356
Query: 311 -------EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN-ARFWLMGIATFQSYMRCK 362
E + SS + Y I+H+I EI +L+ + + WL+G A++Q+YMRC+
Sbjct: 357 ETDVREREETSFSSSKEASSYSQIDHMIEEISRLISFHSISCTKLWLVGTASYQTYMRCQ 416
Query: 363 SGHPSLETLWSLHPLTIPA-GSLSLSLITTDSDLQSQSTSKKAESGVSW---LLFEGEEE 418
HP+LET W L + +P+ GSL LSL + S S++T+ W G+E
Sbjct: 417 MRHPTLETRWDLQAVPVPSDGSLGLSLHSF-SLHGSRTTALGHNPSQVWETKPFGIGKEG 475
Query: 419 NKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQY-------KNEKKATLSNN 471
++L+CC DCS+ + E L+SS LP+WLQ + K+++K+T+ +N
Sbjct: 476 QEKLSCC-DCSSNHDKEVHPLKSSQ------QKELPSWLQPFSTQLSHLKSQEKSTMQSN 528
Query: 472 DKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRD 531
+ SG + W++ P+ ++ T+ S + + + K R
Sbjct: 529 ESSSG-SNFLNTWSN--------PFSTKNTMFQDSNTICFTEPSLKMSRSSNQMLKFRRQ 579
Query: 532 WAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHK--DLKQPLSSNRNSTPNSTSS 589
+ + E +F + D + S +L+ ++K D+ L + P +
Sbjct: 580 QSCIT------EFNF---DKYQDATPSLDNLKNMEEDNKEVDISLSLGDSLFKDPKDLTK 630
Query: 590 SDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFK 649
++ H LC +L + VPWQ DT+ IA ++ FK
Sbjct: 631 KSEATIQRDH------------LCKSLAENVPWQSDTIPSIAKALM-----------SFK 667
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
+E E W+ +G D K ++A+ +A +FGS I + R ++ E+ +
Sbjct: 668 SKNE--ELFWILIEGNDKIGKRRLARAIAESIFGSVEQLCKI------NARGNNEENPPS 719
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
K +E A+ V L+ED++Q D K +SG+
Sbjct: 720 K---------IVE---NAMKTQEKLVVLVEDIDQGDPQFMKFLADGFQSGKF 759
>gi|449530130|ref|XP_004172049.1| PREDICTED: chaperone protein ClpB 2-like [Cucumis sativus]
Length = 304
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 186/279 (66%), Positives = 215/279 (77%), Gaps = 17/279 (6%)
Query: 592 IMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDH 651
++E EYV +FKELNSEN LCNALEKKVPWQK+ V DIA+ VL+CRSG RRKGK H
Sbjct: 27 VLEGEYVSRFKELNSENFKRLCNALEKKVPWQKNVVGDIASAVLQCRSGMGRRKGKMG-H 85
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSH-NNFVSIALSSFSSTR-ADSTEDS-R 708
+ KEETWL FQG D KEK+A+ELAR++FGS +N VSI LSSFSSTR ADSTED+ R
Sbjct: 86 GDFKEETWLLFQGNDLRGKEKVAEELARVIFGSATSNLVSITLSSFSSTRSADSTEDNCR 145
Query: 709 NKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
NKRSRDEQSCSY+ERFAEAVS NPHRVFL+EDVEQADY SQ GFKRAIE GRI S G +
Sbjct: 146 NKRSRDEQSCSYLERFAEAVSINPHRVFLVEDVEQADYSSQMGFKRAIEGGRITNSDGQQ 205
Query: 769 VSLGDAIVILSCESFSSRSRACSPPT----------KQKSDGCEEEKGAAMEGTSPSVSL 818
VSL D+IVILSCESFS+RSRACSPP +Q E+E+ E T+P ++L
Sbjct: 206 VSLADSIVILSCESFSARSRACSPPIKKQQENEQEQEQNKGEEEQEQKREEEETAPCLAL 265
Query: 819 DLNICIDDD---STEDQSIDDIGLLESVDKRIIFKIMEL 854
DLNI IDDD + DQSIDD+GLL+SVD+RIIF+I EL
Sbjct: 266 DLNISIDDDEDRAANDQSIDDVGLLDSVDRRIIFQIQEL 304
>gi|79538220|ref|NP_568849.2| Clp amino terminal domain-containing protein [Arabidopsis thaliana]
gi|8843815|dbj|BAA97363.1| unnamed protein product [Arabidopsis thaliana]
gi|332009468|gb|AED96851.1| Clp amino terminal domain-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 232/595 (38%), Positives = 329/595 (55%), Gaps = 124/595 (20%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR GG TIQQ LT EAASV+K ++TLARRRGHAQVTPLHVA T+L++ T LLR AC++SH
Sbjct: 1 MRTGGYTIQQTLTTEAASVLKHSLTLARRRGHAQVTPLHVAATLLSSRTSLLRRACIKSH 60
Query: 61 ----------------------SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTI 98
+HPLQC+ALELCFNVALNRLP + PM G P++
Sbjct: 61 PGFSTNYQFAPSRLQHHHHHNQNHPLQCRALELCFNVALNRLP-TVPGPMFHGQ---PSL 116
Query: 99 SNALVAAFKRAQAHQRRGSIE----------NQQQPLLAVKIELEQLIISILDDPSVSRV 148
+NALVAA KRAQAHQRRG IE QQ LLAVK+ELEQL+ISILDDPSVSRV
Sbjct: 117 ANALVAALKRAQAHQRRGCIEQQQQTQTHPQTQQTQLLAVKVELEQLVISILDDPSVSRV 176
Query: 149 MREAGFSSTQVKSNVEQ-----------AVSLEICSQSTPVSS----------------- 180
MREAGF+ST VKS VE AV + S ++P
Sbjct: 177 MREAGFNSTAVKSCVEDCSVSSVFYGGSAVGV-FSSPNSPDQQQQHHNSINRLHHYQNPK 235
Query: 181 -----------------NKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLM 223
N+S + N L+LS +AS + +R D+ V++ LM
Sbjct: 236 DFNFINPNFPLWQTHFLNQSPDQNPLLLSSSASHHHQQQ------RLREIDLKLVVDVLM 289
Query: 224 SK--RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA--LRDVKCLPLSISSF--RHMN 277
K +K+N V+VG+ ++ EG V ++ K+E+G++ + L+ + S + M
Sbjct: 290 RKKTKKKNPVIVGDSISFTEGFVSELMAKLERGEIDQTGELKQTHFVKFHFSPMASKFMR 349
Query: 278 RVEVEQRVEEIKNLVRSCL--GRGIVLNLGDLEWA--EFRASSS---EQVRGYYCSIEHI 330
R +VE ++E++ V S G+ ++ GDL+W E ++S ++ Y ++H+
Sbjct: 350 REDVELNIKELRKKVLSLTTSGKNAIIFTGDLKWTVKEITNNNSGGINEISSSYSPLDHL 409
Query: 331 IMEIGKLV--CGIG------ENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIP-A 381
+ EIGKL+ C + + W+MG A+FQ+YMRC+ PSLETLW+LHP+++P +
Sbjct: 410 VEEIGKLITECNDDGDDDDCKTRKVWVMGTASFQTYMRCQMRQPSLETLWALHPVSVPSS 469
Query: 382 GSLSLSL-ITTDSDLQSQSTSKKAESGVSWLLFEGEEE-NKQLTCCADCSAKFEAEARSL 439
+L LSL T+ + ++ ST +S + E EE + L+CC +C F+ EA+SL
Sbjct: 470 ANLGLSLHATSGHEARNMSTVNATKSLSGYDKAEEEETISHVLSCCPECVTSFDREAKSL 529
Query: 440 QSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQ 494
++ N D LP+WLQ + + S++ KD + L +KWN C ++H Q
Sbjct: 530 KA---NQD---KLLPSWLQSHDAD-----SSSQKDE-LMGLKRKWNRFCETLHNQ 572
>gi|449463567|ref|XP_004149505.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222907 [Cucumis sativus]
Length = 774
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 277/823 (33%), Positives = 418/823 (50%), Gaps = 132/823 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA---STGLLRTACLQSHS-HPL 64
QQ LT EAASV+K +++LA RRGH+ VTPLHVA+T+L++ + L R ACL+SH HPL
Sbjct: 11 QQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSSKPSTLSLFRRACLKSHPPHPL 70
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS-----IE 119
Q +ALELCFNVALNRLP S S P+L P++SNAL+AA KRAQAHQRRGS +
Sbjct: 71 QSRALELCFNVALNRLPTS-SPPLLHS----PSLSNALIAALKRAQAHQRRGSSLDHQHQ 125
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
QQ PLL +K+EL+ L+ISILDDPSVSRVMREAGFSST VK+N+E+ S I + +
Sbjct: 126 QQQHPLLTIKVELQHLVISILDDPSVSRVMREAGFSSTAVKNNIEEYSSNIITTSTATTQ 185
Query: 180 SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKR-NFVVVGECLA 238
+ + ++ + SK +V E + RKR N V+VG+
Sbjct: 186 TTTTPLFFFPGSGSSSGSENASK--------------FVFEVFLGMRKRKNVVLVGD--- 228
Query: 239 SIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVE--VEQRVEEIKNLVRSCL 296
S EGVV V+ K + G+VPE ++ VK + + + + V + +++EE + +
Sbjct: 229 SSEGVVLEVMRKFKMGEVPEEMKGVKFVEFVPYNNNNNSNVSEFLRRKLEENYDHTENNE 288
Query: 297 GRGIVLNLGDLEWAEFRASSSE-QVRGYYCSIEHIIMEIGKLVCGIGENAR--------- 346
G G+V+ +GDL+W R S S V G IE +++E G N R
Sbjct: 289 G-GVVVYVGDLKWIVERGSCSNFGVDGLVGEIERLLLE------GFHYNDRNNLNIKKKI 341
Query: 347 -FWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITT---DSDLQSQSTSK 402
W+ G+A++Q YMRC+ PSLET W LH L +P+ L+L+L ++ DS L S S
Sbjct: 342 KIWVXGVASYQIYMRCQMRLPSLETQWDLHALPLPSSGLALALHSSSVYDSRLSFFSQSM 401
Query: 403 KAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKN 462
+ + + G+EE++ LTCC +C++ F+ E L+S + LP+WLQ
Sbjct: 402 ETKPFII-----GKEEHQNLTCCEECTSNFQNELLHLKSFH------SKQLPSWLQSPPK 450
Query: 463 EKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSE---RTLTFSSASPSSSTSGFSYD 519
E+ + +L +KWN +CN++H+ ++ ++SS+ P S S+
Sbjct: 451 EE------------LVELKRKWNKLCNTLHRDNSVQSLIGKSFSYSSSYPWWPKSNISFT 498
Query: 520 QQYPNFHKTHRDWAV------VEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLK 573
+ H+T + +QS F F + A K L L ++ D K
Sbjct: 499 DHH--HHQTSKPLQTSNFVPRFRRQQSCTTIEFDFGN-AKTKQEQSGELSLNSLKNMDGK 555
Query: 574 Q-PLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIAN 632
+ ++ ++ S SS++ MEME E SE + LE+ VPW+ + + IA
Sbjct: 556 EVKITLALGNSLFSDSSAESMEME-----SERKSER-GEILKVLEENVPWRSELIPCIAE 609
Query: 633 TVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIA 692
V+ +M++ K W+ +G D K K+ +A L+FGS + + +
Sbjct: 610 AVI-----SMKKDDKLIQ--------WVLMEGNDFIGKRKMGIVIAELLFGSVDFLLDL- 655
Query: 693 LSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGF 752
N +S +E S E +A+ N V L+EDVE AD K
Sbjct: 656 ----------------NAKS-EEMGISKCEMLEKALKLNKELVVLVEDVEMADSQLMKLL 698
Query: 753 KRAIESGRIVTSSGDEVSLGDAIVILSCESFSS--RSRACSPP 793
+ A +G+ E ++ I IL+ ++ S ++R PP
Sbjct: 699 ENAFHNGKF--EDMKEETVQKVIFILTKDNSSDKMKNRDLWPP 739
>gi|224140034|ref|XP_002323392.1| predicted protein [Populus trichocarpa]
gi|222868022|gb|EEF05153.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 171/178 (96%), Gaps = 1/178 (0%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAASV+KQA+TLARRRGHAQVTPLHVANTML+ASTGLLRTACLQSH
Sbjct: 1 MRAGGCTVQQALTAEAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLLRTACLQSH 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHC-QFPTISNALVAAFKRAQAHQRRGSIE 119
SHPLQCKALELCFNVALNRLP STS+PM+G QFP+ISNALVAAFKRAQAHQRRGSIE
Sbjct: 61 SHPLQCKALELCFNVALNRLPTSTSSPMIGTPSQQFPSISNALVAAFKRAQAHQRRGSIE 120
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
NQQQPLLAVKIELEQL+ISILDDPSVSRVMREAGFSSTQVKSNVE+AVSLEICSQS P
Sbjct: 121 NQQQPLLAVKIELEQLMISILDDPSVSRVMREAGFSSTQVKSNVEEAVSLEICSQSVP 178
>gi|115458330|ref|NP_001052765.1| Os04g0416500 [Oryza sativa Japonica Group]
gi|113564336|dbj|BAF14679.1| Os04g0416500, partial [Oryza sativa Japonica Group]
Length = 608
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 243/646 (37%), Positives = 355/646 (54%), Gaps = 86/646 (13%)
Query: 247 VIDKIEKGDVPE--ALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+D++ +G+ + ALR + + L +SSFR M R E E+R+ E++ LV+S G ++L +
Sbjct: 2 AVDRVRRGEAKQHDALRGAQVVSLRVSSFRDMPREEAERRLAELRCLVKS-RGARVLLVV 60
Query: 305 GDLEWAEF---------RASSSEQVRGYYCSIEHIIMEIGKLV-CGIGENARFWLMGIAT 354
DL+WA R S GYYCS+EH++ E+ L C G WL+G T
Sbjct: 61 EDLKWAADFWAAAHAGARRVGSGGGGGYYCSVEHVVTEVRALASCDGG----IWLVGFGT 116
Query: 355 FQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITT--DSDLQSQSTSKKA-------- 404
+Q+YM+C++GHPSLE++W L L +PAGSL+LSL DS L + + S KA
Sbjct: 117 YQTYMKCRAGHPSLESMWGLQTLAVPAGSLALSLTCAFDDSALGAVNQSMKASPHTTDGN 176
Query: 405 ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEK 464
S G C DCSA ++S S +SSLP+WLQ ++++
Sbjct: 177 RPAPSCGPLLGGSHLLSRCCGGDCSAATTTHEHDTKASLPRSFVSSSSLPSWLQHCRDQQ 236
Query: 465 KATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSER-TLTFSS-ASPSSSTSGF-SYDQQ 521
+ + DL K W SIC +P S+R TL FS+ SP+SS S +
Sbjct: 237 L------QESTHFADLGKTWGSICG----KP--SQRMTLHFSAPVSPASSISSYEHGHGH 284
Query: 522 YPNFHKTHRDW--AVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSN 579
H+ H W A ++ K W+ P+ +D + +
Sbjct: 285 QQQQHQPHHSWLLADLDAKHPWK------------------------PKREDDDDEKAKS 320
Query: 580 RNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRS 639
+ +++ S +E+E +FKELN+ENL LC ALEK+VPWQK+ V ++A+ VL+CRS
Sbjct: 321 HDDCSGASNGS--VEVECRSRFKELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRS 378
Query: 640 GTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSST 699
G +R+ + + +E KEETWLFF G D KE++A+ELA LVFGS +F+S+ L + SS+
Sbjct: 379 GIAKRRDRSRS-TEAKEETWLFFLGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSS 437
Query: 700 RADS--TEDS-RNKRSRDEQSCS----YIERFAEAVSNNPHRVFLIEDVEQADYCSQKGF 752
+ S TED R+KR R + S Y+ER +AVS NPHRV LIEDVEQ D+ Q G
Sbjct: 438 PSASGSTEDHHRSKRPRTTTTSSASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGV 497
Query: 753 KRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAA---- 808
K AI+ G + + +GDEV +GDAI+ILSCESF +RSRA SP +K +EE +
Sbjct: 498 KEAIDRGVLRSQAGDEVGVGDAIIILSCESFEARSRAGSPLMNKKMKVEKEEANTSDHDH 557
Query: 809 ---MEGTSPSVSLDLNICIDDDSTEDQ-SIDDIGLLESVDKRIIFK 850
+E +PS DLN+ ++ D D+ S D+ LL +VD+ ++F+
Sbjct: 558 KLEIESGAPSSCFDLNLDMESDQAADELSSGDVCLLTAVDRVLLFR 603
>gi|15234709|ref|NP_194764.1| heat shock-related protein [Arabidopsis thaliana]
gi|7269935|emb|CAB81028.1| putative protein [Arabidopsis thaliana]
gi|332660355|gb|AEE85755.1| heat shock-related protein [Arabidopsis thaliana]
Length = 924
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 279/821 (33%), Positives = 394/821 (47%), Gaps = 139/821 (16%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRA TIQQ LT EAA+V+ Q++ A RR H TPLHVA T+L++S+G LR AC++SH
Sbjct: 1 MRADLITIQQTLTPEAATVLNQSIAEATRRNHGHTTPLHVAATLLSSSSGYLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF--------PTISNALVAAFKRA 109
SHPLQC+ALELCF+VAL RLP +++T P +SNAL AA KRA
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTTSTTTTTTSSSSSSSPSQTQEPLLSNALTAALKRA 120
Query: 110 QAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
QAHQRRG E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VKS +EQ++
Sbjct: 121 QAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKSAIEQSLIG 180
Query: 170 EICSQSTPVSSNKSKESNVLVLSQTASATKVSK-----PRVSLDPI---------RNEDV 215
S S S + + + V++ PR+ + R ++
Sbjct: 181 NSVSNSRQTGSPGIINPSAIGFGYRSVPAPVNRNLYLNPRLQQPGVGMQSGMMIQRTDEA 240
Query: 216 MYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPE-ALRDVKCLPLSISSFR 274
VIE ++ RKRN V+VG+ I +V+ +++KIE G+ + ALR+ + + L
Sbjct: 241 KRVIEIMIRTRKRNPVLVGDSEPHI--LVKEILEKIENGEFSDGALRNFQVIRLEKELVS 298
Query: 275 HMNRVEVEQRVEEIKNLVRSCL-GRGIVLNLGDLEW-AEFRASSSEQVRGYYCSIEHIIM 332
+ R+ EI LV + + G G+VL+LGDL+W E A++ V +
Sbjct: 299 QL-----ATRLGEISGLVETRIGGGGVVLDLGDLKWLVEHPAANGGAV-----------V 342
Query: 333 EIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTD 392
E+ KL+ R +G AT ++Y+RC+ +PS+E W L + I A S SL
Sbjct: 343 EMRKLLERY--KGRLCFIGTATCETYLRCQVYYPSMENDWDLQAIPIAAKS---SLPAIF 397
Query: 393 SDLQSQSTSKKAESGVSWLLFEGEEENK-------QLTCCADCSAKFEAEARSLQSSSCN 445
L S + + + + E + +++CC+ C +E + ++
Sbjct: 398 PRLGSNNNNNAMLLSNNIISIESISPTRSFQIPMSKMSCCSRCLQSYENDVAKVEKDLTG 457
Query: 446 SDSPTSSLPAWLQQYK----NEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERT 501
+ S LP WLQ K +KK T KD + +L KKWN +C +H SER
Sbjct: 458 DNR--SVLPQWLQNAKANDDGDKKLT-----KDQQIVELQKKWNDLCLRLHPNQSVSERI 510
Query: 502 LTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPS 561
+PS+ + K + + P S +D P+
Sbjct: 511 ------APSTLS-----------MMKINTRSDITPPG----------SPVGTDLVLGRPN 543
Query: 562 LRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVP 621
L PE K E + + + L L K V
Sbjct: 544 RGLSSPEKK---------------------TREARFGKLGDSFDIDLFKKLLKGLAKSVW 582
Query: 622 WQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLV 681
WQ D +A + +C+ G + KG + WL F G D K K+A L+ LV
Sbjct: 583 WQHDAASSVAAAITECKHGNGKSKG----------DIWLMFTGPDRAGKSKMASALSDLV 632
Query: 682 FGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDV 741
GS I +S SS+R D + R K + ++RFAEAV NP V ++ED+
Sbjct: 633 SGSQ----PITISLGSSSRMDDGLNIRGK--------TALDRFAEAVRRNPFAVIVLEDI 680
Query: 742 EQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
++AD + K AIE GRI S G EVSLG+ I+IL+ S
Sbjct: 681 DEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTANS 721
>gi|414882124|tpg|DAA59255.1| TPA: hypothetical protein ZEAMMB73_924088 [Zea mays]
Length = 786
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 193/415 (46%), Positives = 260/415 (62%), Gaps = 43/415 (10%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR+GGC +QQ L +AA+V++QA++LARRRGHAQVTPLHVA+ +L + GLLR ACL+S
Sbjct: 1 MRSGGCAVQQKLAGDAAAVMRQAVSLARRRGHAQVTPLHVASAVLLDAGGLLRAACLRSR 60
Query: 61 --SHPLQCKALELCFNVALNRL---------PASTSTPMLGGHCQFPTISNALVAAFKRA 109
SHPLQCKALELCFNVALNRL PA + GH + P +SNAL AAFKRA
Sbjct: 61 ATSHPLQCKALELCFNVALNRLATAGGPAPPPAMFEFHIHSGH-REPALSNALAAAFKRA 119
Query: 110 QAHQRRG---SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQA 166
Q +QRRG + + Q Q +A K+EL+QL+ISILDDPSVSRVMREAGFSS +VK+NVE+A
Sbjct: 120 QGNQRRGGGSAADGQHQQNVAAKVELDQLVISILDDPSVSRVMREAGFSSAEVKANVEKA 179
Query: 167 VSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIR-NEDVMYVIENLMSK 225
+S SS +S + + ++ TK +PR D ++ D V++ + S
Sbjct: 180 IS----------SSEQSSNTASSSSASPSTITK--EPRAKADAVQVVGDAARVLDCMASG 227
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDV---PEALRDVKCLPLSISSFRHMNRVEVE 282
R VVGE A+ EGVV+ V+DK+ KG++ + L++ + +P S +SF+ R EVE
Sbjct: 228 TNRCVAVVGESAAAAEGVVKAVMDKVSKGELRRQHQRLKNAQFVPFSAASFQRTPREEVE 287
Query: 283 QRVEEIKNLVRSC--LGRGIVLNLGDLEW------AEFRASSSEQVRG--YYCSIEHIIM 332
R ++ LVR C G+G+VL L DL + A S RG +YC +EH +M
Sbjct: 288 ARAGDLCALVRECCAAGKGVVLVLEDLGYAAEAWTAALWTRSDRSARGLRHYCPVEHAVM 347
Query: 333 EIGKLVCGIGENAR--FWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLS 385
E+ LV G G + FW++G A + Y C+SG PSLET+ L P+ +P GSL
Sbjct: 348 ELSSLVRGGGGRDKDMFWVLGFAAYAPYTSCRSGQPSLETVLGLRPVVVPDGSLG 402
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 143/273 (52%), Gaps = 37/273 (13%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETW 659
KF EL++ENL LC ALE +VP +D IA+ VL+ RSG R + TW
Sbjct: 528 KFTELSAENLKILCRALETRVPRHRDIAPGIASAVLQRRSGVTRT-------ARPTPATW 580
Query: 660 LFFQGVDADAKEKIAKELARLVFGSHNNFVSI--ALSSFSSTRADSTEDSRN--KRSR-- 713
L F+G D D K +A+ELARLVFGSH++F SI A S + + S+ ++ KR R
Sbjct: 581 LLFRGRDNDGKMSMARELARLVFGSHDDFTSIAAAASKLAPDHSGSSSPGKHSLKRQRSP 640
Query: 714 -DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
D + +++ F EA+ NPHRV LI+ VE Q G ++E+G + G VSL
Sbjct: 641 PDNEHGGFMQTFYEAIRENPHRVVLIDGVEHHSKL-QAGIMGSMENGTVRGCDGGVVSLE 699
Query: 773 DAIVILSCESFSSRSR---ACSP-PTKQ--------KSDGCEEEKGAAMEGTSPSVSLDL 820
D+IV+ CE+F SRS + SP P KQ K +G + +KG P SLDL
Sbjct: 700 DSIVVC-CEAFESRSLPRVSSSPRPVKQMITSDVDSKVEGDDADKGVV-----PHFSLDL 753
Query: 821 NIC-IDDDSTEDQS---IDDIGLLESVDKRIIF 849
N C IDD E+ S D + + VD F
Sbjct: 754 NTCAIDDGEGEEASSSWYDAMEIQNDVDGVFFF 786
>gi|326501854|dbj|BAK06419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1010
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 296/949 (31%), Positives = 431/949 (45%), Gaps = 176/949 (18%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAST----------- 49
MRAG TI Q LTAEAA+V+K A+ LARRRGH QVTPLHVA +L+++
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLAVGLARRRGHGQVTPLHVAFALLSSACSQPLACAATGP 60
Query: 50 --GLLRTACLQSHS------HPLQCKALELCFNVALNRLPASTSTPMLGGHCQF------ 95
GLLR ACL+SHS HPLQC+ALELCFNVALNRLP S
Sbjct: 61 AYGLLRRACLRSHSAVPPAQHPLQCRALELCFNVALNRLPTSGPHSPPPSSAPPFASSLI 120
Query: 96 ---PTISNALVAAFKRAQAHQRRGSIENQQ-------------------QPLLAVKIELE 133
P +SNALVAA KRAQA+QRRG +E QQ QP+LAVK+EL+
Sbjct: 121 QPNPMLSNALVAALKRAQANQRRGCVELQQPPPSPGPVQHQGAQQQQLQQPVLAVKVELD 180
Query: 134 QLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQ 193
QLIISILDDPSVSRVMREAGFSS VKSN+E+ +L + S S+ L S
Sbjct: 181 QLIISILDDPSVSRVMREAGFSSATVKSNLEEESALMMSSSSSSPPPPVIPPHFFLDHSS 240
Query: 194 TAS-------ATKVSKPRVSLDPIRNEDVMYVIENLMSKRKR--NFVVVGECLASIEGVV 244
A ++ P V++ P EDV V+E ++ KR R N VVVG+ ++ E V
Sbjct: 241 IDGCGFGMWPAQFLTSPPVAV-PCCKEDVRAVLEVMVRKRGRRTNPVVVGDSVSMAEAVA 299
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
++ +E+G+VPE L L L +S R M+R +V+ + +++ V + G+V+
Sbjct: 300 GELLRCLERGEVPEELAGAHLLKLQLSYVHVRLMSRADVDAKAAQLRRSVDAVQRGGLVV 359
Query: 303 NLGDLEWA---EFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYM 359
+GDL WA + + ++ Y +EH++ E+G+L+ + R WL+ A++Q+YM
Sbjct: 360 YVGDLRWALDEDPAGAGADHTASSYSPVEHMVAELGRLLDDLRARCRVWLVATASYQTYM 419
Query: 360 RC--KSGHPSLETLWSLHPLTIPAGS---LSLSLITTDSD-------LQSQSTSKKAESG 407
RC + G PSLE+ W+L + +P S L+L+ + + S Q K +
Sbjct: 420 RCQHRRGQPSLESAWALQAVAVPTVSGTGLALNNLHSSSSPSMPKAKASGQQLGKSPMAM 479
Query: 408 VSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKAT 467
+ + G E+ ++ C++C+ +E EA S+ ++ SLP WL N+ A
Sbjct: 480 AAEPMALGSEQEDKMLLCSECNRSYEREA-SVVKQEAGTEGLRCSLPGWL-VLDNKPPAD 537
Query: 468 LSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHK 527
+ + +L KW+ +C +H R+ SPS G S
Sbjct: 538 HQMPHQGKHLIELKMKWSRLCTKLHLW-----RSQQHDPCSPSCFVPGLS---------- 582
Query: 528 THRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNST 587
P SW L S +ST PS+ ++ ++ SS+R S P+
Sbjct: 583 --------APPNSWWPSPCLLP---SGQST--PSIAGFLGLEGLMEHSRSSSRWSPPSPL 629
Query: 588 SSSDIMEMEYVHKFKELNSENLTSLCNA------------------LEKKVPWQ-KDTVY 628
+ME E + L L L + L K +P Q TV
Sbjct: 630 PCPGLMEPERLDVKTTLALGTLLPLSDTATSEGPAHDGLAHELERRLRKTIPCQTAGTVA 689
Query: 629 DIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNF 688
+I V RS RKG LFF+G D A+ + A +A GS +
Sbjct: 690 EIVEAVASSRS--YGRKG-----------VCLFFKGSDHAAQHRAAVVIAETCCGSADQI 736
Query: 689 VSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCS 748
++ AD K S E CS + A +S + V +I DVE A
Sbjct: 737 IA----------ADP-----KKYSCAEDFCSDVVSRACTLSCS-RLVLVIPDVEHAPRHL 780
Query: 749 QKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSR-------------------- 788
G I G E+ L +I+I + F++R+
Sbjct: 781 VDYLVAESRCGCIKDHLGRELKLSGSIIIFTTSEFANRATDVISLRLWTSSSPADVKRKA 840
Query: 789 ACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDI 837
PPT++ C+ + + + + L++N C +D+ +D DI
Sbjct: 841 EIEPPTRE----CKRARHGSGSDSGHGIDLNINPCAGNDTDDDAVPSDI 885
>gi|242084828|ref|XP_002442839.1| hypothetical protein SORBIDRAFT_08g003680 [Sorghum bicolor]
gi|241943532|gb|EES16677.1| hypothetical protein SORBIDRAFT_08g003680 [Sorghum bicolor]
Length = 814
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 258/431 (59%), Gaps = 50/431 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS--TGLLRTACLQ 58
MR+GGC +QQ L +AA+V++QA++LARRRGHAQVTPLHVA+ +L+ S LLR ACL+
Sbjct: 1 MRSGGCAVQQELAGDAAAVMRQAVSLARRRGHAQVTPLHVASAVLSVSDAGALLRAACLR 60
Query: 59 SH--SHPLQCKALELCFNVALNRLPASTSTPML---------------GGHCQFPTISNA 101
S SHPLQCKALELCFNVALNRL + P GGH + P +SNA
Sbjct: 61 SRASSHPLQCKALELCFNVALNRLATTAGMPGPPAPPPAMFQFHHAPAGGH-RAPALSNA 119
Query: 102 LVAAFKRAQAHQRRGSIENQQQPLLA-----VKIELEQLIISILDDPSVSRVMREAGFSS 156
L AAFKRAQA+QRRG +ELEQL+ISILDDPSVSRVMR+AGF+S
Sbjct: 120 LAAAFKRAQANQRRGGGGGGFGVRRGGRPAPAPVELEQLVISILDDPSVSRVMRDAGFAS 179
Query: 157 TQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVM 216
+V +NVE+AVS S +T SS S + + + TK + R D I D +
Sbjct: 180 AEVNANVEKAVSSSEQSSNTATSSTASPNT-----TTNNNPTKDKESRAKADDIVG-DAV 233
Query: 217 YVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV----PEALRDVKCLPLSISS 272
V++ + S R VV+GE A+ E VV+ V+DK+ KG++ E L++ + +P S +S
Sbjct: 234 RVLDCMASGTNRCVVVLGETAAAAERVVKAVMDKVSKGELRRRQHERLKNAQLVPFSAAS 293
Query: 273 FRHMNRVEVEQRVEEIKNLVRSC--LGRGIVLNLGDL-------EWAEFRASSSEQVRGY 323
F+ M R EVE R ++ LVR C GRG+VL L DL A ++ SS + G
Sbjct: 294 FQRMPREEVEARAGDLCALVRECCAAGRGVVLVLEDLAYAAEAWTAASWKRSSGHRAHGL 353
Query: 324 --YCSIEHIIMEIGKLVCGIGENAR----FWLMGIATFQSYMRCKSGHPSLETLWSLHPL 377
YC ++H +ME+ LV G G R FWL+G SY C+SG PSLET+ LHP+
Sbjct: 354 IDYCPVQHAVMELSSLVRGAGGRGRDKGMFWLLGFGASASYTSCRSGQPSLETVLGLHPV 413
Query: 378 TIPAGSLSLSL 388
+P G L+LSL
Sbjct: 414 VVPDGGLALSL 424
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 130/271 (47%), Gaps = 28/271 (10%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETW 659
KF EL +ENL L +ALE +VP +D IA+ VL+ RSG R + TW
Sbjct: 551 KFTELTAENLKVLSSALETRVPRHRDIAPGIASAVLQRRSGVTRT-------TRPTPATW 603
Query: 660 LFFQGVDADAKEKIAKELARLVFGSHNNFV---SIALS------SFSSTRADSTEDSRNK 710
L FQG D D K +A+ELARLVFGS+ F + A S S SS+ D R +
Sbjct: 604 LLFQGRDNDGKMAMARELARLVFGSYAEFTCCFAAAASKLAPDHSGSSSPGDRRSLKRQR 663
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
S D + ++ F EA+ NPHRV L++ + D + G A+ SG + G VS
Sbjct: 664 SSPDNEHGGCMQMFYEAIRENPHRVVLVDGGVEHDSELEVGIMDAMASGTVRGCDGGVVS 723
Query: 771 LGDAIVILSCESF----SSRSRACSPPTKQK------SDGCEEEKGAAMEGTSPSVSLDL 820
L D+IV+ CE F SS + P KQ+ D E+ GA P SLDL
Sbjct: 724 LEDSIVVYCCEVFVESVSSPRVSSPRPVKQRIITSGDVDSKVEDDGAEKGVVVPRFSLDL 783
Query: 821 NICIDDDSTED--QSIDDIGLLESVDKRIIF 849
N C D E+ S + + +L VD F
Sbjct: 784 NACAIDGEGEEGSSSYNAMEILNVVDGVFFF 814
>gi|222628845|gb|EEE60977.1| hypothetical protein OsJ_14761 [Oryza sativa Japonica Group]
Length = 636
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 306/558 (54%), Gaps = 72/558 (12%)
Query: 323 YYCSIEHIIMEIGKLV-CGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPA 381
YYCS+EH++ E+ L C G WL+G T+Q+YM+C++GHPSLE++W L L +PA
Sbjct: 116 YYCSVEHVVTEVRALASCDGG----IWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPA 171
Query: 382 GSLSLSLITT--DSDLQSQSTSKKA--------ESGVSWLLFEGEEENKQLTCCADCSAK 431
GSL+LSL DS L + + S KA S G C DCSA
Sbjct: 172 GSLALSLTCAFDDSALGAVNQSMKASPHTTDGNRPAPSCGPLLGGSHLLSRCCGGDCSAA 231
Query: 432 FEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSI 491
++S S +SSLP+WLQ ++++ + + DL K W SIC
Sbjct: 232 TTTHEHDTKASLPRSFVSSSSLPSWLQHCRDQQL------QESTHFADLGKTWGSICGKP 285
Query: 492 HKQPYYSERTLTFSS-ASPSSSTSGF-SYDQQYPNFHKTHRDW--AVVEPKQSWREHHFL 547
++ TL FS+ SP+SS S + H+ H W A ++ K W+
Sbjct: 286 SQR-----MTLHFSAPVSPASSISSYEHGHGHQQQQHQPHHSWLLADLDAKHPWK----- 335
Query: 548 FSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSE 607
P+ +D + + + +++ S +E+E +FKELN+E
Sbjct: 336 -------------------PKREDDDDEKAKSHDDCSGASNGS--VEVECRSRFKELNAE 374
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
NL LC ALEK+VPWQK+ V ++A+ VL+CRSG +R+ + + +E KEETWLFF G D
Sbjct: 375 NLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRS-TEAKEETWLFFLGGDG 433
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDS-RNKRSRDEQSCS----Y 720
KE++A+ELA LVFGS +F+S+ L + SS+ + S TED R+KR R + S Y
Sbjct: 434 HGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTTSSASEAY 493
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ER +AVS NPHRV LIEDVEQ D+ Q G K AI+ G + + +GDEV +GDAI+ILSC
Sbjct: 494 LERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEVGVGDAIIILSC 553
Query: 781 ESFSSRSRACSPPTKQKSDGCEEEKGAA-------MEGTSPSVSLDLNICIDDDSTEDQ- 832
ESF +RSRA SP +K +EE + +E +PS DLN+ ++ D D+
Sbjct: 554 ESFEARSRAGSPLMNKKMKVEKEEANTSDHDHKLEIESGAPSSCFDLNLDMESDQAADEL 613
Query: 833 SIDDIGLLESVDKRIIFK 850
S D+ LL +VD+ ++F+
Sbjct: 614 SSGDVCLLTAVDRVLLFR 631
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 82/92 (89%), Gaps = 3/92 (3%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAGGCT+QQ LTAEAA+VVKQA+TLARRRG+AQVTPLHVA+ MLA GLLR ACL+SH
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 SHPLQCKALELCFNVALNRLPAS---TSTPML 89
SHPLQCKALELCFNVALNRLPAS S+P+L
Sbjct: 61 SHPLQCKALELCFNVALNRLPASAAVASSPLL 92
>gi|224144311|ref|XP_002325256.1| predicted protein [Populus trichocarpa]
gi|222866690|gb|EEF03821.1| predicted protein [Populus trichocarpa]
Length = 899
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 254/856 (29%), Positives = 402/856 (46%), Gaps = 167/856 (19%)
Query: 92 HCQFPTISNALVAAFKRAQAHQRRGSIENQQQ-PLLAVKIELEQLIISILDDPSVSRVMR 150
H Q P++SNAL+AA KRAQAHQRRG IE QQQ PLL +K+ELEQLI+SILDDPSVSRVMR
Sbjct: 3 HGQ-PSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIVSILDDPSVSRVMR 61
Query: 151 EAGFSSTQVKSNVEQ--AVSLEIC---------SQSTPVSSNKSKE---------SNVLV 190
EAGFSST VK+N+E A S+ C S +P ++ +E S+ L
Sbjct: 62 EAGFSSTAVKNNIEDSSASSVFQCYSTSGGVFSSPCSPSATETQREVINPTTFWQSHFLT 121
Query: 191 LSQT------ASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
S ++ KVS + ED+ V+E L+ K +N V+VG+C++ EG++
Sbjct: 122 YSSEQNPALFSAQKKVSSNYFTDSGSVKEDIKLVLEVLLRKNGKNVVIVGDCVSVTEGLI 181
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
++ ++E+G+VP L+ + + + S + M + +VE + E+K V S G ++
Sbjct: 182 GELMGRLERGEVPMQLKQTQFIKFQFAPISLKFMKKQDVEMNLSELKRKVDSLGESGAII 241
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGE-NARFWLMGIATFQSYMRC 361
GDL+W + +V Y ++H++ EIG+L+ N + WLM A++Q+YM+C
Sbjct: 242 YTGDLKWTVEETFVNGEV-SVYSPVDHLVREIGRLLSEYSSSNRKVWLMATASYQTYMKC 300
Query: 362 KSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQ 421
+ PSLET W+L +++P+G L LSL + S + S E+ + +G+EE +
Sbjct: 301 QMRQPSLETQWALQAVSVPSGGLGLSLHPSRIKF-SHNPSLVLETKP--FINDGKEEEDR 357
Query: 422 LTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLC 481
TCC +C++ +E E SL+S LP WLQ +N+ + +L
Sbjct: 358 FTCCPECNSNYEKEVHSLKSGQ------QKHLPPWLQPQG-------TNSIQKDEFVELR 404
Query: 482 KKWNSICNSIHKQ--------PYYSERTL---TFSSAS------------PSSSTSGFSY 518
+KWN +C+S+H Q YS ++L FS AS P S++ F
Sbjct: 405 RKWNRLCHSLHHQGRQSNLNSTLYSNQSLLGKNFSFASSYPWWPSQNSFFPDSNSISFGD 464
Query: 519 DQQYPNFHKTHRDWAVVEPKQSWREH-HFLFSHEASDKSTSEPSL-RLYIPEHKDLKQPL 576
PN+ + V + ++ H F F + EP+L L E K++K L
Sbjct: 465 SALKPNYSSS----CVPKFRRQQSCHVEFNFVNGTQKNEPGEPNLDSLKNTEGKEVKITL 520
Query: 577 SSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLK 636
+ ++ SDI ++E LC L++ VPWQ +T+ I + +++
Sbjct: 521 ALG------NSLFSDIGKLEKGRS---------GHLCKLLKENVPWQSETIPSIVDALVE 565
Query: 637 CRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF 696
+S +++TWL QG D K ++A +A V GS + + +
Sbjct: 566 SKSN--------------EKDTWLLIQGNDTLGKRRLALAIAESVLGSADLLLHL----- 606
Query: 697 SSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAI 756
N R RD + SY E A A+ N V +EDV+ A+ K
Sbjct: 607 ------------NMRKRDNEVTSYSEMLARALRNQEKLVVFVEDVDLAETRFLKFLADGF 654
Query: 757 ESGRIVTSS----------------GDEV-----SLGDAIVILSCESFSSRSRACSPPTK 795
ESG+ SS GD + + D+++ ++ + S +S++ K
Sbjct: 655 ESGKFGESSNRREGNASQVIFILTRGDSIIYEDRKMDDSVIQMTLK-ISGKSKSPRVDEK 713
Query: 796 QKSDGCEEEKGAAMEGTSPSVS---LDLNICIDDDS----------------TEDQSIDD 836
+ + +E G + S S LDLN+ D+D T + S D
Sbjct: 714 ENASWFPDENGNKKKDFSRQSSFNTLDLNLKADEDDESEGKPGEFSPISSDLTRETSSDQ 773
Query: 837 I---GLLESVDKRIIF 849
+ GLL+ + R +F
Sbjct: 774 LSPKGLLDMIKNRFVF 789
>gi|21741941|emb|CAD40432.1| OSJNBa0035B13.5 [Oryza sativa Japonica Group]
gi|215769315|dbj|BAH01544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1064
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 271/904 (29%), Positives = 410/904 (45%), Gaps = 173/904 (19%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS------------ 48
MRAG TI Q LTAEAA+V+K A+ +ARRRGHAQVTPLHVA +L+ +
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 49 TGLLRTACLQSH--------SHPLQCKALELCFNVALNRLP---------------ASTS 85
GLL+ ACL+SH +HPLQC+ALELCFNVALNRLP + +
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 86 TPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIE--------------------NQQQP 124
P Q PT+SNALVAA KRAQA+QRRG +E QQQP
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQQQP 180
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST-------- 176
LLA+K+EL+QLIISILDDPSVSRVMREAGFSS+ VKSN+E +L + + S+
Sbjct: 181 LLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLEGESALMMSTSSSPPPPAIPP 240
Query: 177 -----PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK--RKRN 229
P A +S P +++ P EDV V+E ++ K R+ N
Sbjct: 241 HFFLDPSIGVGGNGGGGGGGFMLWPAPFLSSPGMAV-PSCKEDVRAVLEVMVRKQGRRTN 299
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEE 287
VVVG+ ++ E V ++ ++E GDVP+ L L L +S R M+R +V+ + E
Sbjct: 300 PVVVGDSVSMAEAVAGELLRRLEGGDVPDELAGAHLLKLQLSYVHVRLMSRADVDAKAAE 359
Query: 288 IKNLVRSCLGRGIVLNLGDLEWA--------EFRASSSEQVRGYYCSIEHIIMEIGKLVC 339
++ V + G+V+ +GDL WA + Y +EH++ E+G+L+
Sbjct: 360 LRRSVDAVKRGGLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEHMVAELGRLLG 419
Query: 340 GIGENA----RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGS---LSL----SL 388
+ +A R WL+ A++Q+YMRC+ PSLE+ W+L + +P G+ L+L ++
Sbjct: 420 DLRASAPPRGRVWLVATASYQTYMRCRRRRPSLESAWALQAVVVPTGAGTGLALNNLHAV 479
Query: 389 ITTDSD-------------------LQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCS 429
TT S+ L S + AE E ++K L C +CS
Sbjct: 480 ATTTSNGEPVQQAMVATNHQQQQQQLASPFVAMAAEPAA-----RNELDDKLLVLCTECS 534
Query: 430 AKFEAEARSLQSSSC-NSDSPTSS--LPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNS 486
+E EA ++++ + + + P ++ LP WL + K++ + +L +KW+
Sbjct: 535 HNYEREASAVKAEAAADEEGPRAAGNLPGWL----------VPEPPKENYLIELKRKWSR 584
Query: 487 ICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDW---AVVEPKQSWRE 543
+C R L S F Y N + W + + P +
Sbjct: 585 LC-----------RKLHLCGGGDPCSGQSFGAGA-YGNGPSSLLPWWSASCLLPNGGGKP 632
Query: 544 HHFLF-SHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFK 602
F EA S P +P L++P + +T + S + +
Sbjct: 633 SIAGFLGMEALRWS---PPAAAALPSLSSLREPECQD-VTTALALGSLPLSDSASSSGGG 688
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLK-CRSGTMRRKGKFKDHSEVKEETWLF 661
+ L L K VPWQ+ V +IA+ V RSG + WL
Sbjct: 689 GGDGAAARELERRLRKNVPWQRAAVAEIADAVAAGARSGNGTKGAG----------VWLL 738
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYI 721
+G D A ++A +A GS + V + S + ++ + D +S
Sbjct: 739 LKGSDHAAVRRVAAVIAETHCGSADRVVVV-----------SADPNKFGCADDFRSDVVA 787
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS-SGDEVSLGDAIVILSC 780
A + V +++DVE+A + A SG + G E+ L ++V+++
Sbjct: 788 RASMAAAAGGNKLVLVVDDVERAPQHVVECLVAASRSGALKDKFGGQELDLSGSVVVMTT 847
Query: 781 ESFS 784
+
Sbjct: 848 SKLA 851
>gi|222628569|gb|EEE60701.1| hypothetical protein OsJ_14192 [Oryza sativa Japonica Group]
Length = 1050
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 213/606 (35%), Positives = 309/606 (50%), Gaps = 130/606 (21%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS------------ 48
MRAG TI Q LTAEAA+V+K A+ +ARRRGHAQVTPLHVA +L+ +
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 49 TGLLRTACLQSH--------SHPLQCKALELCFNVALNRLP---------------ASTS 85
GLL+ ACL+SH +HPLQC+ALELCFNVALNRLP + +
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 86 TPMLGGHCQ-FPTISNALVAAFKRAQAHQRRGSIE--------------------NQQQP 124
P Q PT+SNALVAA KRAQA+QRRG +E QQQP
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQQQP 180
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST-------- 176
LLA+K+EL+QLIISILDDPSVSRVMREAGFSS+ VKSN+E +L + + S+
Sbjct: 181 LLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLEGESALMMSTSSSPPPPAIPP 240
Query: 177 -----PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK--RKRN 229
P A +S P +++ P EDV V+E ++ K R+ N
Sbjct: 241 HFFLDPSIGVGGNGGGGGGGFMLWPAPFLSSPGMAV-PSCKEDVRAVLEVMVRKQGRRTN 299
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEE 287
VVVG+ ++ E V ++ ++E GDVP+ L L L +S R M+R +V+ + E
Sbjct: 300 PVVVGDSVSMAEAVAGELLRRLEGGDVPDELAGAHLLKLQLSYVHVRLMSRADVDAKAAE 359
Query: 288 IKNLVRSCLGRGIVLNLGDLEWA--------EFRASSSEQVRGYYCSIEHIIMEIGKLVC 339
++ V + G+V+ +GDL WA + Y +EH++ E+G+L+
Sbjct: 360 LRRSVDAVKRGGLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEHMVAELGRLLG 419
Query: 340 GIGENA----RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGS---LSL----SL 388
+ +A R WL+ A++Q+YMRC+ PSLE+ W+L + +P G+ L+L ++
Sbjct: 420 DLRASAPPRGRVWLVATASYQTYMRCRRRRPSLESAWALQAVVVPTGAGTGLALNNLHAV 479
Query: 389 ITTDSD-------------------LQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCS 429
TT S+ L S + AE E ++K L C +CS
Sbjct: 480 ATTTSNGEPVQQAMVATNHQQQQQQLASPFVAMAAEPAA-----RNELDDKLLVLCTECS 534
Query: 430 AKFEAE-ARSLQSSSCNSDSPTSS--LPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNS 486
+E E + ++ + + P ++ LP WL + K++ + +L +KW+
Sbjct: 535 HNYEREASAVKAEAAADEEGPRAAGNLPGWL----------VPEPPKENYLIELKRKWSR 584
Query: 487 ICNSIH 492
+C +H
Sbjct: 585 LCRKLH 590
>gi|413922132|gb|AFW62064.1| hypothetical protein ZEAMMB73_199434 [Zea mays]
Length = 1028
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 257/879 (29%), Positives = 399/879 (45%), Gaps = 111/879 (12%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR------- 53
MRA TIQQ LT EAA+ + +A+ A RR H Q TPLHVA +LAA GLLR
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 54 -------TACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAF 106
A +HPLQC+ALELCF+VAL+RLPA+ + H P +SNALVAA
Sbjct: 61 ATGAGPGAAGGAGGAHPLQCRALELCFSVALDRLPAAAAA-SAAAHASGPPVSNALVAAL 119
Query: 107 KRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQA 166
KRAQA QRRG E QQPLLAVK+ELEQL++SILDDPSVSRVMREA FSS VK+ +EQ+
Sbjct: 120 KRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKTTIEQS 179
Query: 167 ---------VSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV---SLDPIRNED 214
VS + +TPV+ + S + PR+ + +D
Sbjct: 180 LPSPSAAAVVSTPTVAATTPVAPSPSP------FPRVGPTNAYINPRLAAAAGVGGGRDD 233
Query: 215 VMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFR 274
V V++ ++ +RN V+VG+ A + V+R + +I D AL K LPL +
Sbjct: 234 VRKVLDVMLKPARRNPVLVGD--AGPDAVLREAVRRIPTSDS-HALAGAKVLPLEADLAK 290
Query: 275 HM-NRVEVEQRVEEIKNLVRSCLGR--GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHII 331
++ + R+ ++ +V+ L +VL+LGDL+W +++ G + ++
Sbjct: 291 LAGDKAAMAARIGDLGAMVQRILADHGAVVLDLGDLKWLVDGPAAAASEGG-----KAVV 345
Query: 332 MEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI------------ 379
E+ +L+ G + W +G A +Y+RCK HP++E W L + I
Sbjct: 346 SEMARLLGPFGSR-KVWAVGTAACATYLRCKVYHPTMEADWDLQAVPIARSAPLAGAALR 404
Query: 380 PA--GSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEE--NKQLTCCADCS------ 429
P G L S+ L+ + A + W G + + C C
Sbjct: 405 PGGIGILGNSVGMLSPALRPMPVTPTA---LRWPPGAGSDHPLKAKPAMCLLCKGSYDRE 461
Query: 430 -AKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSIC 488
AK AE + +SS + P LP W+Q +++ + ++ +L KKW+ C
Sbjct: 462 LAKLLAEQKEKPASSPEAAKP--GLPHWMQPSRDQPQTKEQELKQNEAAEELEKKWHETC 519
Query: 489 NSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLF 548
H S RT+ + + + P ++ +W+E
Sbjct: 520 ARTH-----SNRTVAPALS--LPLAALAPRPPVEPKLQPASGGVPTLKMNTNWKEPEGTP 572
Query: 549 SHEASDKSTSEPSLRLYIPEHKDLK-QPLSSN----RNSTPNSTSSSDIMEMEYVHKFKE 603
+ E P DL PL + ++ N T M+ + +
Sbjct: 573 TSELRKSPPGSPV-------KTDLALGPLDPDATMEKDQKENYTEGLTAMQKAKIAGISD 625
Query: 604 LNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
+ E+ L AL +KV WQ D IA V++CR+ + +R+ + + + WL F
Sbjct: 626 I--ESFKRLLKALTEKVSWQSDAASAIAAAVIQCRTASGKRR-----NIGTRGDIWLLFV 678
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIER 723
G D K K+A L+ + + ++ S +D + + + ++R
Sbjct: 679 GPDQAGKRKMANALSEQMVNAEPVVINFGGDSRWG------KDGNGRPNPGFWGKTSLDR 732
Query: 724 FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESF 783
EAV NP V ++E ++Q D + RA+++GR+ S G EVSLG+ I +L+ +
Sbjct: 733 VTEAVRQNPCSVIVLEGIDQVDAVVRGKINRAMDTGRLPDSRGREVSLGNVIFVLTTDWL 792
Query: 784 SSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNI 822
R + K D +++G +E L+L+I
Sbjct: 793 PEELR------RPKFDTPLQDEGKMLEAAHSDWQLELSI 825
>gi|297602401|ref|NP_001052404.2| Os04g0298700 [Oryza sativa Japonica Group]
gi|255675299|dbj|BAF14318.2| Os04g0298700 [Oryza sativa Japonica Group]
Length = 517
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 255/468 (54%), Gaps = 86/468 (18%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS------------ 48
MRAG TI Q LTAEAA+V+K A+ +ARRRGHAQVTPLHVA +L+ +
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 49 TGLLRTACLQSHS--------HPLQCKALELCFNVALNRLP---------------ASTS 85
GLL+ ACL+SH HPLQC+ALELCFNVALNRLP + +
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 86 TPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIE--------------------NQQQP 124
P Q PT+SNALVAA KRAQA+QRRG +E QQQP
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQQQP 180
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST-------- 176
LLA+K+EL+QLIISILDDPSVSRVMREAGFSS+ VKSN+E +L + + S+
Sbjct: 181 LLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLEGESALMMSTSSSPPPPAIPP 240
Query: 177 -----PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK--RKRN 229
P A +S P +++ P EDV V+E ++ K R+ N
Sbjct: 241 HFFLDPSIGVGGNGGGGGGGFMLWPAPFLSSPGMAV-PSCKEDVRAVLEVMVRKQGRRTN 299
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEE 287
VVVG+ ++ E V ++ ++E GDVP+ L L L +S R M+R +V+ + E
Sbjct: 300 PVVVGDSVSMAEAVAGELLRRLEGGDVPDELAGAHLLKLQLSYVHVRLMSRADVDAKAAE 359
Query: 288 IKNLVRSCLGRGIVLNLGDLEWA--------EFRASSSEQVRGYYCSIEHIIMEIGKLVC 339
++ V + G+V+ +GDL WA + Y +EH++ E+G+L+
Sbjct: 360 LRRSVDAVKRGGLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEHMVAELGRLLG 419
Query: 340 GIGENA----RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGS 383
+ +A R WL+ A++Q+YMRC+ PSLE+ W+L + +P G+
Sbjct: 420 DLRASAPPRGRVWLVATASYQTYMRCRRRRPSLESAWALQAVVVPTGA 467
>gi|357152976|ref|XP_003576297.1| PREDICTED: uncharacterized protein LOC100837720 [Brachypodium
distachyon]
Length = 841
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/392 (45%), Positives = 229/392 (58%), Gaps = 53/392 (13%)
Query: 25 TLARRRGHAQVTPLHVANTMLAAST-------GLLRTACLQS--HSHPLQCKALELCFNV 75
+LARRRGHAQVTPLHVA ML++S GLLR ACL+S HSHPLQCKALELCFNV
Sbjct: 27 SLARRRGHAQVTPLHVATAMLSSSPAPAAPGPGLLRAACLRSSSHSHPLQCKALELCFNV 86
Query: 76 ALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQ-PLLA----- 127
ALNRLP S GH PT +SNALVAAFKRAQAH RRGS E+ P+LA
Sbjct: 87 ALNRLPTS-----FHGHGGSPTAALSNALVAAFKRAQAHHRRGSGESSSPAPVLAGHGGG 141
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
K+ELEQL++SILDDPSVSRVMREAGFSS VK+NV +LE S K +
Sbjct: 142 TKVELEQLVVSILDDPSVSRVMREAGFSSALVKANV---AALE-------RESPKPSPPS 191
Query: 188 VLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVV---------GECLA 238
+AT K + ED M V+E + S + R V V A
Sbjct: 192 DHPHPSHYTATSTKKLNNGVGGGGIEDAMKVLECMASGQHRCIVAVSGSGGGHGDDGGSA 251
Query: 239 SIEGVVRGVIDKIEKGDVPEA-----LRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVR 293
E V+ V+D + K ++P+ L V+ +PLS+SSFR R EV+ R E++ L R
Sbjct: 252 RAERAVKAVMDMVSKAELPQGQNYKQLACVQFVPLSVSSFRAAARGEVDARTGELRGLAR 311
Query: 294 SC--LGRGIVLNLGDLEW-AEFRASSSEQVRG--YYCSIEHIIMEIGKLVCGIGENARFW 348
G+G+V+ + DL + A+F A + ++ R YYC +EH +ME+ LV G RFW
Sbjct: 312 EAQRAGKGLVVVVQDLAFAADFWAEAGKRPRAEDYYCPLEHAVMEVSGLVRHGG--GRFW 369
Query: 349 LMGIATFQSYMRCKSGHPSLETLWSLHPLTIP 380
++G A+ + RC++G PSL +W +HP+ P
Sbjct: 370 MLGFASEAVFSRCRAGRPSLADVWGIHPVVFP 401
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 137/286 (47%), Gaps = 43/286 (15%)
Query: 600 KFKELNSENLTSLCNALEKKV--PWQKDTVYDIANTVLKCRSG--TMRRKGKFKDHSEVK 655
+F EL +E+L +LC ALE + P +D IA+ VL+ RSG T RR+
Sbjct: 559 RFTELTAESLKTLCGALEGPLAPPRSRDLAPAIASVVLRRRSGVTTQRRR-------TAA 611
Query: 656 EETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSS------FSST-----RADST 704
TWL F+G D D K+ +A ELARLVFGS+ +F + +S+ F S+ +T
Sbjct: 612 AATWLVFRGDDGDGKKAMAMELARLVFGSYADFACLTISADHSVVGFPSSGEFVPATKTT 671
Query: 705 EDSRNKRSRDE---QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
R RS D+ C+ + EA+ NP RV +++ EQ D K AI +GR+
Sbjct: 672 FKRRRSRSPDDNVRHGCAQSIKLYEALRENPRRVIMVDGAEQLDI-DNGCVKEAIANGRM 730
Query: 762 VTSS---------GDEVSLGDAIVILSCESFSSR---SRACSPPTKQKSDGCEEEKGAAM 809
SS GD V L DAIV+LS + R R ++ G E G A
Sbjct: 731 RCSSSVGNVNGNGGDSVGLEDAIVVLSFDDSRPRVKSQRVLIDDEEEGGSGVGMEDGLAK 790
Query: 810 EGTSPSVSLDLNICIDDDSTEDQS----IDDIGLLESVDKRIIFKI 851
+ + P SLDLN C+ D E+ DD+ + + VD F++
Sbjct: 791 K-SPPRFSLDLNACVAGDEEEETGNLVEDDDVEIGDVVDGVFYFQL 835
>gi|413918032|gb|AFW57964.1| hypothetical protein ZEAMMB73_132211 [Zea mays]
Length = 1030
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 265/828 (32%), Positives = 375/828 (45%), Gaps = 195/828 (23%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------- 45
MRAG TI Q LTAEAA+V+K A+ LARRRGHAQVTPLHVA +L
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALALARRRGHAQVTPLHVAFALLTGPAACAQPLAAFSS 60
Query: 46 ----AASTGLLRTACLQSHS------------HPLQCKALELCFNVALNRLPAS------ 83
A GLL+ ACL+SH HPLQC+ALELCFNVALNRLPAS
Sbjct: 61 PASPAVPYGLLKRACLRSHPAPGPAACHGAPQHPLQCRALELCFNVALNRLPASGPQSAP 120
Query: 84 -TSTPMLGGHCQ-FPTISNALVAAFKRAQAHQRRGSIE------------NQQQPLLAVK 129
+++P Q PT+SNALVAA KRAQA+QRRG +E QQQ LLA+K
Sbjct: 121 SSTSPFTSPLIQPSPTLSNALVAALKRAQANQRRGCVELQQPPPPANAPPAQQQALLAIK 180
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL---EICSQSTPVSSNKSKES 186
+ELEQL+ISIL+DPSVSRVMREAGFSS VKSN+E+ +L S
Sbjct: 181 VELEQLVISILEDPSVSRVMREAGFSSATVKSNLEEESALMPPRSSSSPPLPLPPPPIPP 240
Query: 187 NVLVLSQTASATKVSKPRVSLDPIR-----------NEDVMYVIENLMSKRKR--NFVVV 233
+ + S+ K R L P N+DV V+E ++ K++R N VVV
Sbjct: 241 HFFIDPSIPSSGKAGD-RFGLWPAHFLSAAPGPGACNDDVRAVLEVMVRKQERRSNPVVV 299
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNL 291
G+ ++ E V ++ ++E+GDVPE L L L +S R M+R +V R E++
Sbjct: 300 GDSVSMAEAVADELLRRLERGDVPEELAGAHLLKLQLSYVHIRLMSRGDVNARASELRRS 359
Query: 292 VRSC---LGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLV------CGIG 342
V + G G+V+ +GDL WA + Y +EH++ E+G+L+ CG
Sbjct: 360 VDAVQLQRGGGLVVYVGDLRWALDEEAHDNHAVSSYSPVEHMVAELGRLLDDLRASCG-- 417
Query: 343 ENARFWLMGIATFQSYMRCKS-GHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTS 401
R WL+ A++Q+YMR + LE+ W+L + +P GS + + + S S+
Sbjct: 418 ---RAWLVATASYQTYMRWQQRRRRPLESAWTLQAVVVPTGSGTGLSLNSLGSSSSCSSL 474
Query: 402 KKAESGVSWLL-------------------FEGEEENK---QLTCCADCSAKFEAEARSL 439
+ A +GV + F G +E + QL C +C+ +E EA +L
Sbjct: 475 QSASAGVPPPMLTSQPLGQNPFPEVGAATAFAGRDEQEDEMQLALCTECTKNYEREA-TL 533
Query: 440 QSSSCNSDSPTSSLPAWL-------QQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIH 492
+ +++ P +SLP WL Q +EK T+ L +KW+ +C +H
Sbjct: 534 VKAEADAEGPRASLPGWLVLDRPPADQTPHEKYLTV-----------LKRKWSRLCRKLH 582
Query: 493 --------KQPYYSERTLTFSSASPSSSTSGFSYD--------QQYPNFHKTHRDWAVVE 536
+ P++S +S S D ++ P WA
Sbjct: 583 LCSDPGSPQCPWWSGSCSQPASKGKPSEPRFLGLDGLMGQHTSRRSPPSPSRSPRWAPSP 642
Query: 537 PK----QSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI 592
P Q L SH SD +TS D + P S + S+
Sbjct: 643 PMGSGCQGVGTTLALASHLLSDSATS------------DSRAPGSGD--------GSAAA 682
Query: 593 MEMEYVHKFKELNSENLTSLCNALEKKVPWQ-KDTVYDIANTVLKCRSGTMRRKGKFKDH 651
E+E L + +PWQ + V +IAN V+ R +
Sbjct: 683 RELE-----------------QRLRRNIPWQPRAIVAEIANAVVASR-----------ES 714
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSST 699
+ WL+ +G D A + +A GS + + S FSS
Sbjct: 715 DDGATGVWLYVKGSDHVATRRAVTVIAETRCGSADRVICADPSKFSSA 762
>gi|414587732|tpg|DAA38303.1| TPA: hypothetical protein ZEAMMB73_613010 [Zea mays]
Length = 1040
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 367/819 (44%), Gaps = 175/819 (21%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------- 45
MRAG TI Q L AEAA+V+K A+ LARRRGHAQVTPLHVA +L
Sbjct: 1 MRAGAYTIHQSLNAEAAAVLKLALALARRRGHAQVTPLHVAFALLTGPAAAAACMQPLAA 60
Query: 46 -------AASTGLLRTACLQSHS------------HPLQCKALELCFNVALNRLPAS--- 83
AA GLL+ ACL+SH HPLQC+ALELCFNVALNRLPAS
Sbjct: 61 FYSPASLAAPYGLLKRACLRSHPAPGAASSHGAPQHPLQCRALELCFNVALNRLPASGPH 120
Query: 84 -----TSTPMLGGHCQ-FPTISNALVAAFKRAQAHQRRGSIE----------NQQQPLLA 127
+ P Q PT+SNALVAA KRAQA+QRRG +E Q QPLLA
Sbjct: 121 SPPSSMTAPFTSPLIQPSPTLSNALVAALKRAQANQRRGCVELPQPPPPANAPQPQPLLA 180
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+K+ELEQL+ISILDDPSVSRVMREAGFSS VK+N+E+ +L S+
Sbjct: 181 IKVELEQLVISILDDPSVSRVMREAGFSSATVKNNLEEESALMPPPSSSSPPPPPPPIPP 240
Query: 188 VLVLSQTASATKVSKPRVSLDPIR----------NEDVMYVIENLMSK--RKRNFVVVGE 235
+ + S+ S R L P + + DV V+E ++ K R+ N VVVG+
Sbjct: 241 HFFIDSSISSGGKSGDRFGLWPAQFLAAPGPGACSADVRAVLEVMVRKEGRRSNPVVVGD 300
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVR 293
++ E V ++ +E+GDVPEAL L L +S R M+R +V R E++ V
Sbjct: 301 SVSMAEAVAGELLRCLERGDVPEALAGAHLLKLQLSYVHVRLMSRADVNARASELRRSVD 360
Query: 294 SC---LGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI-GENARFWL 349
+ G G+V+ +GDL WA ++ Y +EH++ E+G+L+ + R WL
Sbjct: 361 AVQLQRGGGLVVCVGDLRWALDEEANDNHAVSSYSPVEHMVAELGRLLDDLRASRVRAWL 420
Query: 350 MGIATFQSYMRCKS-GHPSLETLWSLHPLTIPAGS---LSLSLI---------------- 389
+ A++Q+YMR + LE+ W+L + +P GS LSL+++
Sbjct: 421 VATASYQTYMRWQQRRRRPLESAWALQAVVVPTGSGSGLSLNILHSTSSSTSLPSASAGV 480
Query: 390 ---TTDSDLQSQSTSKKAESGVSWLLFEG--EEENKQLTCCADCSAKFEAEARSLQSSSC 444
T S Q+ A S F G E++ QL C +C+ +E+EA SL +
Sbjct: 481 PPATAASQQLGQNPFAMAGSATE---FAGRDEQDEMQLVLCTECTRNYESEA-SLVKAED 536
Query: 445 NSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIH--------KQPY 496
+ + P +SL WL + + K + +L +KW+ +C +H P+
Sbjct: 537 DVEGPRASLAGWLVL---DGPSAAQTPHKQKYLIELKRKWSRLCGKLHLCSDPCSPPCPW 593
Query: 497 YSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRD-------------WAVVEPK----Q 539
+S L S S S D K+ W + P Q
Sbjct: 594 WSGSGLLPVSQSKPSVAGFLGLDGLIEQQRKSRTGRWFPPSPSRGPPRWCLSPPTREACQ 653
Query: 540 SWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVH 599
L SH SD +TS+ +R S S++ + E
Sbjct: 654 GVGTTLALGSHLLSDSATSQ-------------------SRASGGGDGSAAVVRE----- 689
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVY-DIANTVLKCRSGTMRRKGKFKDHSEVKEET 658
L L + +PWQ V +IA V+ S R G +
Sbjct: 690 ------------LGQRLRRNIPWQPGAVVAEIAKAVVA--SSRRERDGTLG--------S 727
Query: 659 WLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFS 697
WL+ +G D A + +A GS V S +S
Sbjct: 728 WLYVKGRDHSATRRAVTVIAETCCGSAGRVVRTDPSKYS 766
>gi|414869079|tpg|DAA47636.1| TPA: hypothetical protein ZEAMMB73_303998 [Zea mays]
Length = 1033
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 366/819 (44%), Gaps = 182/819 (22%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------- 45
MRAG TI Q L AEAA+V+K A+ LARRRGHAQVTPLHVA +L
Sbjct: 1 MRAGAYTIHQSLNAEAAAVLKLALALARRRGHAQVTPLHVAFALLTGPAAAAACMQPLAA 60
Query: 46 -------AASTGLLRTACLQSHS------------HPLQCKALELCFNVALNRLPAS--- 83
AA GLL+ ACL+SH HPLQC+ALELCFNVALNRLPAS
Sbjct: 61 FYSPASLAAPYGLLKRACLRSHPAPGAASSHGAPQHPLQCRALELCFNVALNRLPASGPH 120
Query: 84 -----TSTPMLGGHCQ-FPTISNALVAAFKRAQAHQRRGSIE----------NQQQPLLA 127
+ P Q PT+SNALVAA KRAQA+QRRG +E Q QPLLA
Sbjct: 121 SPPSSMTAPFTSPLIQPSPTLSNALVAALKRAQANQRRGCVELPQPPPPANAPQPQPLLA 180
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+K+ELEQL+ISILDDPSVSRVMREAGFSS VK+N+E+ +L S+
Sbjct: 181 IKVELEQLVISILDDPSVSRVMREAGFSSATVKNNLEEESALMPPPSSSSPPPPPPPIPP 240
Query: 188 VLVLSQTASATKVSKPRVSLDPIR----------NEDVMYVIENLMSK--RKRNFVVVGE 235
+ + S+ S R L P + + DV V+E ++ K R+ N VVVG+
Sbjct: 241 HFFIDSSISSGGKSGDRFGLWPAQFLAAPGPGACSADVRAVLEVMVRKEGRRSNPVVVGD 300
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVR 293
++ E V ++ +E+GDVPEAL L L +S R M+R +V R E++ V
Sbjct: 301 SVSMAEAVAGELLRCLERGDVPEALAGAHLLKLQLSYVHVRLMSRADVNARASELRRSVD 360
Query: 294 SC---LGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI-GENARFWL 349
+ G G+V+ +GDL WA ++ Y +EH++ E+G+L+ + R WL
Sbjct: 361 AVQLQRGGGLVVCVGDLRWALDEEANDNHAVSSYSPVEHMVAELGRLLDDLRASRVRAWL 420
Query: 350 MGIATFQSYMRCKS-GHPSLETLWSLHPLTIPAGS---LSLSLI---------------- 389
+ A++Q+YMR + LE+ W+L + +P GS LSL+++
Sbjct: 421 VATASYQTYMRWQQRRRRPLESAWALQAVVVPTGSGSGLSLNILHSTSSSTSLPSASAGV 480
Query: 390 ---TTDSDLQSQSTSKKAESGVSWLLFEG--EEENKQLTCCADCSAKFEAEARSLQSSSC 444
T S Q+ A S F G E++ QL C +C+ +E+EA SL +
Sbjct: 481 PPATAASQQLGQNPFAMAGSATE---FAGRDEQDEMQLVLCTECTRNYESEA-SLVKAED 536
Query: 445 NSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIH--------KQPY 496
+ + P +SL WL +K + +L +KW+ +C +H P+
Sbjct: 537 DVEGPRASLAGWLVLDGPSQKYLI----------ELKRKWSRLCGKLHLCSDPCSPPCPW 586
Query: 497 YSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRD-------------WAVVEPK----Q 539
+S L S S S D K+ W + P Q
Sbjct: 587 WSGSGLLPVSQSKPSVAGFLGLDGLIEQQRKSRTGRWFPPSPSRGPPRWCLSPPTREACQ 646
Query: 540 SWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVH 599
L SH SD +TS+ +R S S++ + E
Sbjct: 647 GVGTTLALGSHLLSDSATSQ-------------------SRASGGGDGSAAVVRE----- 682
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVY-DIANTVLKCRSGTMRRKGKFKDHSEVKEET 658
L L + +PWQ V +IA V+ S R G +
Sbjct: 683 ------------LGQRLRRNIPWQPGAVVAEIAKAVVA--SSRRERDGTLG--------S 720
Query: 659 WLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFS 697
WL+ +G D A + +A GS V S +S
Sbjct: 721 WLYVKGRDHSATRRAVTVIAETCCGSAGRVVRTDPSKYS 759
>gi|357142263|ref|XP_003572512.1| PREDICTED: uncharacterized protein LOC100838396 [Brachypodium
distachyon]
Length = 720
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 300/574 (52%), Gaps = 87/574 (15%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA------------- 47
MRAGG T+ Q LTAEAA+VVK ++ LARRRGHAQVTPLHVA T+L
Sbjct: 1 MRAGGYTVHQSLTAEAAAVVKMSLALARRRGHAQVTPLHVAFTLLTGSSSPSSAHHHQQP 60
Query: 48 ------STGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHC-------Q 94
+ GLLR AC++SHS LQC+ALELCFNVALNRLP + + Q
Sbjct: 61 ALSSSYAHGLLRRACVKSHS--LQCRALELCFNVALNRLPTTDAGCSPPSSSLSASIIHQ 118
Query: 95 F--PTISNALVAAFKRAQAHQRRGSIENQQQ-----------PLLAVKIELEQLIISILD 141
F PT+SNALVAA KRAQA+QRRG IE Q Q PL+A+K+EL+QL++SILD
Sbjct: 119 FNNPTLSNALVAALKRAQANQRRGCIELQSQLPPPPPTEQQQPLVAIKVELDQLVVSILD 178
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLEIC-----SQSTPVSSNKSKESNVLVLSQTAS 196
DPSVSRVMREAGFSS VKSN+E+ + + QS V+ + N + +
Sbjct: 179 DPSVSRVMREAGFSSAAVKSNIEEESASMLAHHHHHHQSASVALIRPHFFNEPHILDFPT 238
Query: 197 ATKVSKPRVSLDP-------IRNEDVMYVIENLMSK----RKRNFVVVGECLASIEGVVR 245
P + P + EDV ++E +M K R+ N VVVG+ + E V
Sbjct: 239 NGGFGTPFSNQAPDGVVGSSCKEEDVRAILEAMMRKQGGRRRANPVVVGDTASVAEASVG 298
Query: 246 GVIDKIEKGDV-PEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
++ ++++GDV P+ LR + L L R M R +++ V +++ G+++ +
Sbjct: 299 QLMRRLDRGDVLPDELRGARVLRLHHQP-RFMTRADLDASVADLRRRSADATA-GVIIYV 356
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
GD+ WA A +E + ++ +M R WL+ A++++YMRC+ G
Sbjct: 357 GDIRWAVDDAGLAEHMAAELARLQGELM--------AARRGRAWLVAAASYKTYMRCR-G 407
Query: 365 HPSLETLWSLHPLTIPAGS---LSLSLITTDSDLQSQSTSKKAESG-----VSWLLFEGE 416
P LE W L P+ +PAG+ L+L + S K+ + W GE
Sbjct: 408 SP-LEAAWELQPVVVPAGAGNGLALGPRAAPPIPAAPSGMKQGQINRVPEVPVWDHASGE 466
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSG 476
E++ CA+C+ +E EA ++++ + + + P W + +E +A+ DKD
Sbjct: 467 EDDVP-ALCAECANSYEKEASAVRAKAQDITLALTYFPGWPR--ADEPQAS----DKDE- 518
Query: 477 VRDLCKKWN-SICNSIHKQPYYSERTLTFSSASP 509
+ +L KW+ S C +H + + T +S SP
Sbjct: 519 LLELKMKWSRSCCQMLHLRGHQRPSITTNASPSP 552
>gi|40253563|dbj|BAD05509.1| 101 kDa heat shock protein; HSP101-like protein [Oryza sativa
Japonica Group]
Length = 1041
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 266/861 (30%), Positives = 381/861 (44%), Gaps = 137/861 (15%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR------- 53
MRA TIQQ LT EAA+ + +AM A RR H Q TPLHVA +LAA GLLR
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAMDEAGRRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 54 -----------TACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNA 101
A + +HPL C+ALELCF+VAL+RLPA+ + P +SNA
Sbjct: 61 SAAGVGGGGGAAAGAGAGAHPLHCRALELCFSVALDRLPAAAAAAAAAHGAGASPPVSNA 120
Query: 102 LVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKS 161
LVAA KRAQA QRRG E QQPLLAVK+ELEQL++SILDDPSVSRVMREA FSS VKS
Sbjct: 121 LVAALKRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKS 180
Query: 162 NVEQAVSL----EICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY 217
+EQ++S + ST + + L + +A PR++
Sbjct: 181 IIEQSLSAPSPCPSAAASTTTAGPGPLSPSPSPLPRAGAANAYLNPRLAAAAAVASGGGG 240
Query: 218 --------VIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLS 269
VI+ ++ +RN V+VG+ A + V++ I +I P AL K LPL
Sbjct: 241 GGGDDARKVIDVMLKPTRRNPVLVGD--AGPDAVLKEAIRRIPTAGFP-ALAGAKVLPLE 297
Query: 270 ISSFRHM-NRVEVEQRVEEIKNLVRSCLGR--GIVLNLGDLEWAEFRASSSEQVRGYYCS 326
+ ++ + R+ ++ +V LG G+VL+LGDL+W +++ G
Sbjct: 298 AELAKLAGDKAAMAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDGPAAAASEGGKAA- 356
Query: 327 IEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI------- 379
+ E+G+L+ G A W + A +Y+RCK HP +E W LH + I
Sbjct: 357 ----VAEMGRLLRRFG-RAGVWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPIARGGAPI 411
Query: 380 ----------PAGS--LSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENK--QLTCC 425
P GS L+ S+ L+ + A + W G +++ + C
Sbjct: 412 AAAAAGSALRPGGSGILNSSMGMLSPALRPMPVTPTA---LRW-PPPGSDQSPAAKPAMC 467
Query: 426 ADCSAKFEAEARSLQSSSCNSDSPTS-------SLPAWLQQYKNEKKATLSNNDKDSGVR 478
C +E E L++ +D P S LP WLQ ++ KA
Sbjct: 468 LLCKGSYERELAKLEAE--QTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELKLKRSKD 525
Query: 479 DLCKKWNSICNSIHK----QPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAV 534
+L +KW C IH P S TF+ P G + P K + W
Sbjct: 526 ELERKWRETCARIHSACPMAPALSVPLATFTPRPPVEPKLGVARGAAVPTL-KMNPSW-- 582
Query: 535 VEPKQSWREHHFLFSHEASDKSTSEPSLRLYI-PEHKDLKQPLSSNRNSTPNSTSSSDIM 593
+K + P+L L P +K L R P + + +
Sbjct: 583 -------------------EKPSVAPTLELRKSPPASPVKTDLVLCRLD-PGTNPAVENE 622
Query: 594 EMEYVHKFKELNS---------ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR 644
+ E L E+ L L +KV WQ D IA V++CRSG+ +R
Sbjct: 623 QKESCEGLTALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKR 682
Query: 645 KGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADST 704
+ + + + WL F G D K K+ L+ L+ + V+
Sbjct: 683 R-----NVGTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFG------------ 725
Query: 705 EDSRNKR-SRDEQSCSY-----IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIES 758
DSR R D + + ++R EAV NP V ++E ++Q D KRA+E+
Sbjct: 726 GDSRLGRVGNDGPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMET 785
Query: 759 GRIVTSSGDEVSLGDAIVILS 779
GR+ S G EVSLG+ I +L+
Sbjct: 786 GRLPDSRGREVSLGNVIFVLT 806
>gi|224090507|ref|XP_002309005.1| predicted protein [Populus trichocarpa]
gi|222854981|gb|EEE92528.1| predicted protein [Populus trichocarpa]
Length = 896
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 227/745 (30%), Positives = 355/745 (47%), Gaps = 132/745 (17%)
Query: 92 HCQFPTISNALVAAFKRAQAHQRRGSIENQQQ---PLLAVKIELEQLIISILDDPSVSRV 148
H Q P++SNAL+AA KRAQAHQRRG IE QQQ PLL +K+ELEQLI+SILDDPSVSRV
Sbjct: 3 HGQ-PSLSNALIAALKRAQAHQRRGCIEQQQQQQQPLLTIKVELEQLILSILDDPSVSRV 61
Query: 149 MREAGFSSTQVKSNVEQ--AVSLEIC---------SQSTPVSSNKSKES-NVLVLSQTAS 196
MREAGFSST VK+N+E A S+ C S +P ++ KE N QT
Sbjct: 62 MREAGFSSTSVKNNIEDSSASSVFQCYSTSGGVFSSPCSPSATETQKEVINPTTFWQTHF 121
Query: 197 ATKVS-KPRVSLDPIR-------------NEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
S K V L P + ED+ V+E L+ ++N V+VG+C+ EG
Sbjct: 122 LNYTSEKNPVLLSPQKKVSSNYFTDSGSVKEDIKLVLEVLL---RKNVVIVGDCVPVTEG 178
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVEEIKNLVRSCLGRGI 300
++ ++ ++E+G+VP L+ + + + S R M + +V+ + E+K V S G
Sbjct: 179 LIAELMGRLERGEVPMELKQTRIIEFQFAPVSLRFMKKEDVKMNLSELKRKVDSLGESGA 238
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI-GENARFWLMGIATFQSYM 359
++ GDL+WA + +V G Y ++H++ EIG+L+ N + WLM A++Q+YM
Sbjct: 239 IIYTGDLKWAVEETVGNGEVSG-YSPVDHLVTEIGRLLSEYSSSNTKVWLMATASYQTYM 297
Query: 360 RCKSGHPSLETLWSLHPLTIPAGSLSLSL-ITTDSDLQSQSTSKKAESGVSWLLFEGEEE 418
+C+ PS+E W+L +++P+G L LSL ++ S+ S K + G+EE
Sbjct: 298 KCQMRRPSIEIQWALQAVSVPSGGLGLSLHASSISNNPSHVLETKP------FINNGKEE 351
Query: 419 NKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVR 478
+ TCC +C++ +E E + L+S L WLQ ++N KD V
Sbjct: 352 QDKFTCCQECTSNYEKEVQLLKSGQ------QKHLLPWLQ------PQGTNSNQKDELV- 398
Query: 479 DLCKKWNSICNSIHKQPYYSE-------------RTLTFSSAS----------PSSSTSG 515
+L +KWN +C+S+H Q S + +F+S+ P S++
Sbjct: 399 ELRRKWNRLCHSLHHQGRQSNLNSTLFNNQSMLGKNYSFASSYPWWPSQNSFFPDSNSIS 458
Query: 516 FSYDQQYPNFHKTHRDWAVVEPKQSWREH-HFLFSHEASDKSTSEPSL-RLYIPEHKDLK 573
F+ PN+ ++ V + ++ H F F + EP+L L E K++K
Sbjct: 459 FADSALKPNYSSSN----VPKFRRQQSCHIEFNFVNGFQKNEPEEPNLDSLKNSEGKEVK 514
Query: 574 QPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANT 633
L+ ++ SDI ++E LC L++ VPWQ + + I +
Sbjct: 515 ITLAL------GNSLFSDIGKLEKGRS---------DHLCKLLKENVPWQSEIIPSIVDA 559
Query: 634 VLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIAL 693
+++ RS +++TWL QG D K ++A ++ V GS + + +
Sbjct: 560 MVESRS--------------TEKDTWLLIQGNDTLGKRRLALAISESVLGSADLLLHL-- 603
Query: 694 SSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFK 753
N R RD + SY E A + N +EDV+ AD K
Sbjct: 604 ---------------NMRKRDNEVTSYSEMLARTLRNQEKLAVFVEDVDLADIQFLKFLA 648
Query: 754 RAIESGRIVTSSGDEVSLGDAIVIL 778
E+ R SS G ++ +
Sbjct: 649 DGFETERFGESSNKREGNGSQVIFI 673
>gi|242061494|ref|XP_002452036.1| hypothetical protein SORBIDRAFT_04g017380 [Sorghum bicolor]
gi|241931867|gb|EES05012.1| hypothetical protein SORBIDRAFT_04g017380 [Sorghum bicolor]
Length = 789
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 208/601 (34%), Positives = 301/601 (50%), Gaps = 122/601 (20%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS------------ 48
MRAG T+ Q LTAEAA+V+K ++ LARRRGHAQVTPLHVA T+L S
Sbjct: 1 MRAGAYTVHQSLTAEAAAVLKLSLGLARRRGHAQVTPLHVAYTLLGVSEPSSSPRLFTTT 60
Query: 49 ----TGLLRTACL----QSHSHPLQCKALELCFNVALNRLP---------ASTSTPMLGG 91
GLL AC QS +HP QC+ALELCFNVALNRLP +S ST
Sbjct: 61 TPAYGGLLMRACARSRSQSQTHPAQCRALELCFNVALNRLPTGNAAGFGGSSPSTSFAAS 120
Query: 92 HCQ--FPTISNALVAAFKRAQAHQRRGSIE-------------------NQQQP-LLAVK 129
Q PT+SNALVAA KRAQA+QRRG +E +QQQP +L +K
Sbjct: 121 LLQQPSPTLSNALVAALKRAQANQRRGCVELQSQPSPPAPGPQPQSTSPSQQQPTMLTIK 180
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ---AVSLEICSQST---------- 176
+EL+QLIISILDDPSVSRVMREAGFSS VK+N+E+ A+ L + S
Sbjct: 181 VELDQLIISILDDPSVSRVMREAGFSSAAVKTNLEEESAAMLLGLGSHHASSTPSSCSPA 240
Query: 177 -----------------PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVI 219
P + S L S S S P EDV ++
Sbjct: 241 PPPPAAVVVVPPHFFLEPYGGFPAHASGSGALWAAPSLESKSP---SPCPCNAEDVRAIL 297
Query: 220 ENLMSKR----KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SF 273
E ++++R + N VVVG+ + E V ++ ++E+GDVP+ LR + L L +S
Sbjct: 298 EVMLTRRQGRSRANPVVVGDSASVAEASVAELMRRMERGDVPDELRGARVLRLHLSHVHV 357
Query: 274 RHMNRVEVEQRVEEIKNLVRSCLGR-----GIVLNLGDLEWAEFRASSSEQVRGYYCSIE 328
R M R +V+ V +++ V + G G+V+ +GD+ WA S+ + RG +
Sbjct: 358 RLMTRADVDAWVADLRRSVGAATGTDNTGAGLVIYVGDMRWAV--DSNDDDARG-FSPAA 414
Query: 329 HIIMEIGKLVCGI-------GENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPA 381
H+ E+ +L+ + G R WL+ A++ ++MRC+ SLE W L P+++PA
Sbjct: 415 HLAAELARLLGELRLRAASHGHGGRAWLVAAASYGTFMRCQRS--SLEVTWDLQPVSVPA 472
Query: 382 GSLSLSL-------ITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEA 434
G+ L T S + A+ + L + E+ T CA+C+ +E
Sbjct: 473 GAGGGLLDLELGPRAATASSPADGKAAHPAQLPLLDLAPKQEDGVPMPTLCAECAKYYEN 532
Query: 435 EARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICN-SIHK 493
EA +++ + ++ + P W Q +E K + ++ + +L +KW+ +C +H
Sbjct: 533 EATVVRAKAAGTNLALTFFPGWPQ--ADEPKTSHKDD-----LMELKRKWSRLCQLRVHS 585
Query: 494 Q 494
Q
Sbjct: 586 Q 586
>gi|255584936|ref|XP_002533182.1| ATP binding protein, putative [Ricinus communis]
gi|223527016|gb|EEF29205.1| ATP binding protein, putative [Ricinus communis]
Length = 983
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 232/799 (29%), Positives = 365/799 (45%), Gaps = 167/799 (20%)
Query: 103 VAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN 162
+AA KRAQAHQRRG E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+
Sbjct: 1 MAALKRAQAHQRRGCPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKAT 60
Query: 163 VEQAVSLEI--------------------------------CSQSTPVSSNKSKESNVLV 190
+EQ++S+ PV + + N+ V
Sbjct: 61 IEQSLSMNSSSNSSSGAGGGGGGGCGVSNSSSFGFGFRTPGAVMQVPVPGHATANRNLYV 120
Query: 191 ---LSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L Q + A + RNE+V V++ L+ +KRN V+VGE + E VV+ +
Sbjct: 121 NPRLQQGSVAQSGQQ--------RNEEVKRVVDILLKNKKRNPVLVGE--SEPEMVVKEL 170
Query: 248 IDKIEKGDVPEAL-RDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGR----GIVL 302
+ +IE ++ E L ++V + L +++ ++ ++ E+ + + + +G G++L
Sbjct: 171 LKRIENKEIGEGLLKNVHVIHLEKD---FLDKAQISSKIVELGDSIETRIGDLDCGGVIL 227
Query: 303 NLGDLEW-----AEFRASSSEQVRGYYCSI--EHIIMEIGKLVCGIGE--NARFWLMGIA 353
+LGDL+W F A++ Q + S + + E+GKL+ GE N R WL+G A
Sbjct: 228 DLGDLKWLVEQAVSFPATAGVQQQQQIVSDAGKVAVSEMGKLLTRFGERSNGRVWLIGTA 287
Query: 354 TFQSYMRCKSGHPSLETLWSLHPLTI--------------PAGSLSLSLITTDSDLQSQS 399
T ++Y+RC+ HPS+E W L + I P G LS S ++S S
Sbjct: 288 TCETYLRCQVYHPSMENDWDLQAVPIAPRAPLPGMFPRLGPNGILS-------SSVESLS 340
Query: 400 TSKKAESGVSWLL---FEGEEENKQLTCCADCSAKFEAEARSL-------QSSSCNSDSP 449
K + LL E + ++ +CC C +E E + SS S++
Sbjct: 341 PLKGFPTVTPALLRRPTENFDPARRTSCCPQCMQSYEQELAKITPKESERSSSELKSEAT 400
Query: 450 TSSLPAWLQQYKNEKKATLSNND---KDSGVR------DLCKKWNSICNSIHKQPYYSER 500
+ LP WL+ K++ T S + KD + +L KKW+ C +H Y+
Sbjct: 401 QTLLPQWLKNAKSQDIDTKSFDQTATKDQELMSKQKSVELQKKWHDTCLRLHPG-YHQPN 459
Query: 501 TLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEP 560
++ P+ S + Y+ PN H +PK + + + + K P
Sbjct: 460 VVSERITQPALSMTNL-YN---PNLHARQ----PFQPKLGL-NRNLGGTPQLNSKICGTP 510
Query: 561 SLRLYI------------------------PEHKDLKQPLSSNRNSTPN----------- 585
L + P DL + ++ +TP
Sbjct: 511 QLNPQLNSTIDRSPQSPSQSHGQAVTPPGSPVRTDLVLGQAKSKENTPEIGHGERTKDFL 570
Query: 586 ----STSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT 641
S + E++ + L++++ L L +KV WQ+D +A TV +C+ G
Sbjct: 571 GRVASEPQPKLTELQAIKLLNALDADSFKRLLRGLLEKVWWQRDAASAVATTVTRCKLGN 630
Query: 642 MRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRA 701
+++G + K + WL F G D K+K+A L+ LV+GS+ VS+ S R
Sbjct: 631 GKQRG-----NSSKGDIWLLFTGPDRVGKKKMALALSDLVYGSNPIMVSLG-----SCRD 680
Query: 702 DSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRI 761
D D N R + + ++R EAV NP V ++ED+++AD + KRA+E GR+
Sbjct: 681 DRESDV-NFRGK-----TAVDRIVEAVRRNPFSVIMLEDIDEADMIVRGSIKRAMERGRL 734
Query: 762 VTSSGDEVSLGDAIVILSC 780
S G E+SLG+ I IL+
Sbjct: 735 SDSHGREISLGNVIFILTA 753
>gi|224091889|ref|XP_002309387.1| predicted protein [Populus trichocarpa]
gi|222855363|gb|EEE92910.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 175/410 (42%), Positives = 239/410 (58%), Gaps = 41/410 (10%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MRAG TIQQ LT EAASV+ ++ A RR H Q TPLHVA +L + +G LR AC++SH
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAAILLGSPSGFLRQACIKSH 60
Query: 61 ---SHPLQCKALELCFNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
SHPLQC+ALELCF+VAL RLP A +P L P ISNAL+AA KRAQAHQRRG
Sbjct: 61 PNSSHPLQCRALELCFSVALERLPTAQNLSPGLD-----PPISNALMAALKRAQAHQRRG 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQS- 175
E QQQPLLAVK+ELEQLIISILDDPSVSRVMREA FSS VK+ +EQ+++ S S
Sbjct: 116 CPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNASTNSNSA 175
Query: 176 --TPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI------RNEDVMYVIENLMSKRK 227
+ + V V + + PR+ + RNE+V VI+ L+ +K
Sbjct: 176 ANSGIGMGFRAPGAVAVPAPVTNRNLYVNPRLQQGSVGQSGAQRNEEVKKVIDILLKSKK 235
Query: 228 RNFVVVGECLASIEGVVRGVIDKIEK---GDVPEALRDVKCLPLSISSFRHMNRVEVEQR 284
RN V+VGE + + VV+ V+ +IE GD P L++V + L F +++ ++ +
Sbjct: 236 RNPVLVGE--SEPQMVVQEVLKRIENKEVGDWP--LKNVHVIHLE-KGF--LDKAQIAAK 288
Query: 285 VEEIKNL----VRSCLGRGIVLNLGDLEW-----AEFRASSSEQVRGYYCSI-EHIIMEI 334
+ E+ L +R+ G++L+LGDL+W S Q + + + E+
Sbjct: 289 IVELGGLIETRIRNLDCGGVILDLGDLKWLVEQQVSLTGSGGVQQQQIVSDVGRSAVAEM 348
Query: 335 GKLV---CGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPA 381
KL+ + WL+G AT ++Y+RC+ HPS+E W L + I A
Sbjct: 349 RKLLGRFGEGSGGGKVWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAA 398
>gi|413916916|gb|AFW56848.1| hypothetical protein ZEAMMB73_979207 [Zea mays]
Length = 1023
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 247/868 (28%), Positives = 397/868 (45%), Gaps = 89/868 (10%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR------- 53
MRA TIQQ LT EAA+ + +A+ A RR H Q TPLHVA +LAA GLLR
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 54 -------TACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAA 105
A +HPLQC+ALELCF+VAL+RLPA+ S P +SNALVAA
Sbjct: 61 AAGAGPGAAGSAGGAHPLQCRALELCFSVALDRLPAAASAAAAAASHASGPPVSNALVAA 120
Query: 106 FKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ 165
KRAQA QRRG E QQPLLAVK+ELEQL++SILDDPSVSRVMREA FSS+ VK+ +EQ
Sbjct: 121 LKRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSSAVKTTIEQ 180
Query: 166 AVSLEICSQSTP----VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY-VIE 220
+++ S V++ + + LS+ SA PR++ D V++
Sbjct: 181 SLASPSPPPSAVSTPTVAATTTLAPSPSPLSRLGSANAYMNPRLAAAAGGGGDDARKVLD 240
Query: 221 NLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHM--NR 278
++ +RN V+VG+ A + V++ + +I P +L K LPL S + ++
Sbjct: 241 VMLKPARRNPVLVGD--AGPDAVLKEAVRRIPMAGSP-SLAGAKVLPLE-SDLAKLAGDK 296
Query: 279 VEVEQRVEEIKNLVRSCL--GRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGK 336
+ R+ ++ +++ L +VL+LGDL+W +++ G + ++ E+ +
Sbjct: 297 AALAARIGDLGPVIQRLLVDHGAVVLDLGDLKWLVDGPAAAASEGG-----KAVVSEMAR 351
Query: 337 LVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIP--------------AG 382
L+ G + + W +G A +Y+RCK HP++E W L ++I G
Sbjct: 352 LLRQFG-SGKVWAVGTAACATYLRCKVYHPTMEAEWDLQAVSIARSAPLAGAALRPGSTG 410
Query: 383 SLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEEN--KQLTCCADCSAKFEAEARSL- 439
L S+ L+ + A + W G + + C C ++ E L
Sbjct: 411 ILGNSVGMLSHTLRPMPVTPTA---LRWPPGAGSDNPLMAKPVMCLLCKGSYDRELAKLA 467
Query: 440 ----QSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIH-KQ 494
++ + +++ LP W+Q ++ + + +L KKW C H +
Sbjct: 468 AEQKENPASRAEAAKPGLPHWMQPSSDQPQTKEQELKRKEAAEELEKKWRETCARTHGNR 527
Query: 495 PYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASD 554
+L ++ P P + ++ +W + + E
Sbjct: 528 AGAPALSLGLAALVPRPPVE--------PKIQHSRGGVPTLQMNTNWEKPEGTPTSELRK 579
Query: 555 KSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCN 614
P D + +++ N T M+ + ++ E+ L
Sbjct: 580 SPLGSPVKTDLALGPMDPGATVENDQKE--NYTEGLTSMQKAKIAGISDI--ESFKRLLK 635
Query: 615 ALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIA 674
L +KV WQ D IA V++CR+G+ +R+ + + + WL F G D K K+
Sbjct: 636 VLTQKVSWQSDAASAIAAVVIQCRTGSGKRR-----NIGTRGDIWLLFVGPDQAGKRKMV 690
Query: 675 KELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHR 734
L+ L+ + V+ S S + + + ++R EAV NP
Sbjct: 691 NALSELMVNAQPVVVNFGGDSRLSKDGNGLNPGFWGK-------TSLDRVTEAVRQNPCS 743
Query: 735 VFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPT 794
V ++E ++Q D + KRA+E+GR+V S G EVSLG+ I +L+ R
Sbjct: 744 VIILEGIDQVDAVVRGKIKRAMETGRLVDSRGREVSLGNVIFVLTTNWLPEELR------ 797
Query: 795 KQKSDGCEEEKGAAMEGTSPSVSLDLNI 822
+ K + +++G +E S + L+L+I
Sbjct: 798 RPKFETLLQDEGRMLEVASSNWQLELSI 825
>gi|449534098|ref|XP_004174005.1| PREDICTED: chaperone protein ClpB1-like, partial [Cucumis sativus]
Length = 387
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 242/397 (60%), Gaps = 40/397 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA---STGLLRTACLQSHS-HPL 64
QQ LT EAASV+K +++LA RRGH+ VTPLHVA+T+L++ + L R ACL+SH HPL
Sbjct: 11 QQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSSKPSTLSLFRRACLKSHPPHPL 70
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS-----IE 119
Q +ALELCFNVALNRLP S S P+L P++SNAL+AA KRAQAHQRRGS +
Sbjct: 71 QSRALELCFNVALNRLPTS-SPPLLHS----PSLSNALIAALKRAQAHQRRGSSLDHQHQ 125
Query: 120 NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVS 179
QQ PLL +K+EL+ L+ISILDDPSVSRVMREAGFSST VK+N+E+ S I + +
Sbjct: 126 QQQHPLLTIKVELQHLVISILDDPSVSRVMREAGFSSTAVKNNIEEYSSNIITTSTATTQ 185
Query: 180 SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKR-NFVVVGECLA 238
+ + ++ + SK +V E + RKR N V+VG+
Sbjct: 186 TTTTPLFFFPGSGSSSGSENASK--------------FVFEVFLGMRKRKNVVLVGD--- 228
Query: 239 SIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVE--VEQRVEEIKNLVRSCL 296
S EGVV V+ K + G+VPE ++ VK + + + + V + +++EE + +
Sbjct: 229 SSEGVVLEVMRKFKMGEVPEEMKGVKFVEFVPYNNNNNSSVSEFLRRKLEENYDHTENNE 288
Query: 297 GRGIVLNLGDLEWAEFRASSSE-QVRGYYCSIEHIIMEI----GKLVCGIGENARFWLMG 351
G G+V+ +GDL+W R S S V G IE +++E G I + + W+MG
Sbjct: 289 G-GVVVYVGDLKWIVERGSCSNFGVDGLVGEIERLLLEGFHYNGHNNINIKKKIKIWVMG 347
Query: 352 IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL 388
+A++Q YMRC+ PSLET W LH L +P+ L+L+L
Sbjct: 348 VASYQIYMRCQMRLPSLETQWDLHALPLPSSGLALAL 384
>gi|326520325|dbj|BAK07421.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 431
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 266/491 (54%), Gaps = 72/491 (14%)
Query: 372 WSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLT--CCADCS 429
W+L P + SL +L + +++ S W L G QLT CC DCS
Sbjct: 2 WNLIPFVL---SLCSALGAVNQSMKASSDMDGNGPVPRWPLLGG----AQLTSRCCGDCS 54
Query: 430 AKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICN 489
+L S +S S++P+WLQ ++++ + V DL + W+SIC+
Sbjct: 55 GVRIDTKAALPPSFVSS----STIPSWLQHCRDQEP---------THVMDLSRNWSSICS 101
Query: 490 SIHKQPYYSERTLTFSS-ASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLF 548
++ TL FS+ SP+SS S + + QQ P+QSW
Sbjct: 102 KPSQR-----MTLHFSAPVSPASSISSYEHGQQ---------------PRQSWLLADLDG 141
Query: 549 SHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSEN 608
H K ++ + S+ +S +S+ +E+E +FKELN+EN
Sbjct: 142 KHPWKPKCEADEKV-------------------SSHDSGASNGSVEVECRSRFKELNAEN 182
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDAD 668
L LC ALEK+VPWQK+ V +IA+TVL+CRSG +R+ K + ++ KEETW+FF G DAD
Sbjct: 183 LKLLCAALEKEVPWQKEIVPEIASTVLQCRSGIAKRRDKSRS-TDAKEETWMFFLGGDAD 241
Query: 669 AKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSC---SYIERFA 725
KE++A ELA LVFGS NFVSI L + S++ + STE+ R+KR R + +Y+ER
Sbjct: 242 GKERVASELANLVFGSRKNFVSIKLGASSTSASCSTEEHRSKRPRTSTASEGEAYLERLY 301
Query: 726 EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSS 785
+AVS NPHRV L+++ EQAD Q G K AI+SG I + +GDEV + DAIVIL CESF S
Sbjct: 302 DAVSENPHRVILMDNFEQADQYCQVGIKEAIDSGVIRSQTGDEVGVSDAIVILCCESFDS 361
Query: 786 RSRACSPPTKQKSDGCEEEKGA---AMEGTSPSVSLDLNICIDDDSTEDQSIDDIGLLES 842
+SRACS PTKQ +E E + S DLN+ I+++ +++ + LL +
Sbjct: 362 KSRACSSPTKQMRPEIKEAHTVDDDHKEAETSSSCFDLNLNIENEHADERG---VCLLTA 418
Query: 843 VDKRIIFKIME 853
VD+ + F+ E
Sbjct: 419 VDRTLFFRRQE 429
>gi|115475559|ref|NP_001061376.1| Os08g0250900 [Oryza sativa Japonica Group]
gi|113623345|dbj|BAF23290.1| Os08g0250900, partial [Oryza sativa Japonica Group]
Length = 972
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 233/782 (29%), Positives = 342/782 (43%), Gaps = 119/782 (15%)
Query: 62 HPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIEN 120
HPL C+ALELCF+VAL+RLPA+ + P +SNALVAA KRAQA QRRG E
Sbjct: 11 HPLHCRALELCFSVALDRLPAAAAAAAAAHGAGASPPVSNALVAALKRAQAQQRRGCPEA 70
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL----EICSQST 176
QQPLLAVK+ELEQL++SILDDPSVSRVMREA FSS VKS +EQ++S + ST
Sbjct: 71 AQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKSIIEQSLSAPSPCPSAAAST 130
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY--------VIENLMSKRKR 228
+ + L + +A PR++ VI+ ++ +R
Sbjct: 131 TTAGPGPLSPSPSPLPRAGAANAYLNPRLAAAAAVASGGGGGGGDDARKVIDVMLKPTRR 190
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHM-NRVEVEQRVEE 287
N V+VG+ A + V++ I +I P AL K LPL + ++ + R+ +
Sbjct: 191 NPVLVGD--AGPDAVLKEAIRRIPTAGFP-ALAGAKVLPLEAELAKLAGDKAAMAARIGD 247
Query: 288 IKNLVRSCLGR--GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENA 345
+ +V LG G+VL+LGDL+W +++ G + E+G+L+ G A
Sbjct: 248 LGAVVERLLGEHGGVVLDLGDLKWLVDGPAAAASEGGKAA-----VAEMGRLLRRFG-RA 301
Query: 346 RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI-----------------PAGS--LSL 386
W + A +Y+RCK HP +E W LH + I P GS L+
Sbjct: 302 GVWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPIARGGAPIAAAAAGSALRPGGSGILNS 361
Query: 387 SLITTDSDLQSQSTSKKAESGVSWLLFEGEEENK--QLTCCADCSAKFEAEARSLQSSSC 444
S+ L+ + A + W G +++ + C C +E E L++
Sbjct: 362 SMGMLSPALRPMPVTPTA---LRW-PPPGSDQSPAAKPAMCLLCKGSYERELAKLEAE-- 415
Query: 445 NSDSPTS-------SLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHK---- 493
+D P S LP WLQ ++ KA +L +KW C IH
Sbjct: 416 QTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELKLKRSKDELERKWRETCARIHSACPM 475
Query: 494 QPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEAS 553
P S TF+ P G + P K + W
Sbjct: 476 APALSVPLATFTPRPPVEPKLGVARGAAVPTL-KMNPSW--------------------- 513
Query: 554 DKSTSEPSLRLYI-PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNS------ 606
+K + P+L L P +K L R P + + + + E L
Sbjct: 514 EKPSVAPTLELRKSPPASPVKTDLVLCRLD-PGTNPAVENEQKESCEGLTALQKAKIAGI 572
Query: 607 ---ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
E+ L L +KV WQ D IA V++CRSG+ +R+ + + + WL F
Sbjct: 573 SDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRR-----NVGTRGDMWLLFV 627
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR-SRDEQSCSY-- 720
G D K K+ L+ L+ + V+ DSR R D + +
Sbjct: 628 GPDQAGKRKMVNALSELMANTRPVVVNFG------------GDSRLGRVGNDGPNMGFWG 675
Query: 721 ---IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++R EAV NP V ++E ++Q D KRA+E+GR+ S G EVSLG+ I +
Sbjct: 676 KTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFV 735
Query: 778 LS 779
L+
Sbjct: 736 LT 737
>gi|47496876|dbj|BAD19840.1| heat shock protein-related-like [Oryza sativa Japonica Group]
Length = 778
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 201/596 (33%), Positives = 301/596 (50%), Gaps = 113/596 (18%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------- 45
MRAGG T+ Q L+A+AA+V+K A+ LARRRGHAQ+TPLHVA T+L
Sbjct: 1 MRAGGYTVHQALSADAAAVLKLALALARRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDP 60
Query: 46 -----------AASTGLLRTACLQSH-------------SHPLQCKALELCFNVALNRLP 81
+ GLLR AC+++H SHPL+C+ALELCFNVALNRLP
Sbjct: 61 PPFACSGGEPSCCAHGLLRRACVRAHPAVAACAPAAAAASHPLRCRALELCFNVALNRLP 120
Query: 82 ASTSTPMLGGHCQF--------PTISNALVAAFKRAQAHQRRGSIE------------NQ 121
A+ + G C PT+SNALVAA KRAQA+QRRG IE Q
Sbjct: 121 ATNAMADCGRACSPASSLVPPDPTLSNALVAALKRAQANQRRGCIELQSLQPPQHALQPQ 180
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL-------EICSQ 174
QQPLLA+K+EL+QLIISILDDPSVSRVMREAGFSS VKS +E+ ++ +C
Sbjct: 181 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSAAVKSTLEEGGAMLPSLGGHHVCYS 240
Query: 175 STPVSSNKSKESNVLVLSQTASATKVSKPRVSL------DPIRNEDVMYVIENLMSKR-- 226
S+ S E ++ + + AS P L + EDV ++E ++ K+
Sbjct: 241 SS------SPEPHIDLDAHAASGGGAPWPAQFLHRPDTGSSCKEEDVRAILEVMVRKQWA 294
Query: 227 KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQR 284
+ N VVVG+ ++ E V ++ ++E GDVP LR L L +S R M R +V+ +
Sbjct: 295 RPNPVVVGDSVSVAEASVAELMRRLETGDVPGELRGAHVLRLHLSRVHLRLMTRADVDAQ 354
Query: 285 VEEIKNLVRSCL----GRGIVLNLGDLEWA--EFRASSSEQVRGYYCSIEHIIMEIGKLV 338
V E++ S + G+V+ +GD+ WA + + Y +H++ E+ +L+
Sbjct: 355 VAELRRTANSIVVDAKAAGLVIYVGDVRWAVDDDDHHHHHALAEYSAPEDHMVAELARLM 414
Query: 339 CGI--GENARFWLMGIATFQSYMRCKSGH-----PSLETLWSLHPLTIP-------AGSL 384
+ R WL+ A++Q+Y+RC+ PSLE WSL + +P L
Sbjct: 415 SELRAASRGRAWLVAAASYQTYVRCQQRRRRRRAPSLEATWSLQAVVVPAGAGADAGTGL 474
Query: 385 SLSLITTDSDLQSQSTSKKAESGVSWL----LFEGEEENKQLTCCADCSAKFEAEARSLQ 440
SL + S+ + + + L G ++ CA+C+ +E EA ++
Sbjct: 475 SLGRRAPPAPPPSRVAEDDQIAKLGEIPTLDLALGGDDGGVPALCAECADGYEKEASQVR 534
Query: 441 SSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPY 496
+ + + + P W + NE + + + + +L +KW +C +H + +
Sbjct: 535 AKADGTTLALTYFPGW--PHANEPQTS-----HKAELMELRRKWGILCQRVHSRSH 583
>gi|218190701|gb|EEC73128.1| hypothetical protein OsI_07140 [Oryza sativa Indica Group]
Length = 777
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 202/596 (33%), Positives = 299/596 (50%), Gaps = 114/596 (19%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------- 45
MRAGG T+ Q L+A+AA+V+K A+ LARRRGHAQ+TPLHVA T+L
Sbjct: 1 MRAGGYTVHQALSADAAAVLKLALALARRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDP 60
Query: 46 -----------AASTGLLRTACLQSH-------------SHPLQCKALELCFNVALNRLP 81
+ GLLR AC+++H SHPL+C+ALELCFNVALNRLP
Sbjct: 61 PPFACSGGEPSCCAHGLLRRACVRAHPAVAACAPAAAAASHPLRCRALELCFNVALNRLP 120
Query: 82 ASTSTPMLGGHCQF--------PTISNALVAAFKRAQAHQRRGSIE------------NQ 121
A+ + G C PT+SNALVAA KRAQA+QRRG IE Q
Sbjct: 121 ATNAMADCGRACSPASSLVPPDPTLSNALVAALKRAQANQRRGCIELQSLQPPQHALQPQ 180
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL-------EICSQ 174
QQPLLA+K+EL+QLIISILDDPSVSRVMREAGFSS VKS +E+ ++ +C
Sbjct: 181 QQPLLAIKVELDQLIISILDDPSVSRVMREAGFSSAAVKSTLEEGGAMLPSLGGHHVCYS 240
Query: 175 STPVSSNKSKESNVLVLSQTASATKVSKPRVSL------DPIRNEDVMYVIENLMSKR-- 226
S+ S E ++ + + AS P L + EDV ++E ++ K+
Sbjct: 241 SS------SPEPHIDLDAHAASGGGAPWPAQFLHRPDTGSSCKEEDVRAILEVMVRKQWA 294
Query: 227 KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQR 284
+ N VVVG+ ++ E V ++ ++E GDVP LR L L +S R M R +V+ +
Sbjct: 295 RPNPVVVGDSVSVAEASVAELMRRLETGDVPGELRGAHVLRLHLSRVHLRLMTRADVDAQ 354
Query: 285 VEEIKNLVRSCL----GRGIVLNLGDLEWA--EFRASSSEQVRGYYCSIEHIIMEIGKLV 338
V E++ S + G+V+ +GD+ WA + + Y +H++ E+ +L+
Sbjct: 355 VAELRRTANSIVVDAKAAGLVIYVGDVRWAVDDDDHHHHHALAEYSAPEDHMVAELARLM 414
Query: 339 CGI--GENARFWLMGIATFQSYMRCKSGH-----PSLETLWSLHPLTIP-------AGSL 384
+ R WL+ A++Q+Y+RC+ PSLE WSL + +P L
Sbjct: 415 SELRAASRGRAWLVAAASYQTYVRCQQRRRRRRAPSLEATWSLQAVVVPAGAGADAGTGL 474
Query: 385 SLS----LITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQ 440
SL + +K E L G++ CA+C+ +E EA ++
Sbjct: 475 SLGRRAPPAPPPRVAEDDQIAKLGEIPTLDLALGGDDGGVP-ALCAECADGYEKEASQVR 533
Query: 441 SSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPY 496
+ + + + P W + NE + + + + +L +KW +C +H + +
Sbjct: 534 AKADGTTLALTYFPGW--PHANEPQTS-----HKAELMELRRKWGILCQRVHSRSH 582
>gi|242078685|ref|XP_002444111.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
gi|241940461|gb|EES13606.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
Length = 1051
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 266/928 (28%), Positives = 396/928 (42%), Gaps = 181/928 (19%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR------- 53
MRA TIQQ LT EAA+ + +A+ A RR H Q TPLHVA +LAA GLLR
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 54 -------TACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAF 106
+HPL C+ALELCF+VAL+RLPA+ S + H P +SNALVAA
Sbjct: 61 AAGAGPGAGGGAGGAHPLPCRALELCFSVALDRLPAAASAAVA--HAAGPPVSNALVAAL 118
Query: 107 KRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQA 166
KRAQA QRRG E QQPLLAVK+ELEQL++SILDDPSVSRVMREA FSS VK+ +EQ+
Sbjct: 119 KRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVKTTIEQS 178
Query: 167 VSLEICSQSTP--------VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY- 217
+ S S P V++ + L + +A PR++ D Y
Sbjct: 179 ----LASPSPPPAAVSTATVAATTPLAPSPSPLPRVGTANAYINPRLAAAAGGGGDNAYI 234
Query: 218 ----------------------------------VIENLMSKRKRNFVVVGECLASIEGV 243
V++ ++ +RN V+VG+ A + V
Sbjct: 235 NPRLAAVAGGAGDNAYINPRLAAAVGGGGDDARKVLDVMLKPARRNPVLVGD--AGPDAV 292
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHM-NRVEVEQRVEEIKNLVRSCLGR--GI 300
++ V+ +I P AL K LPL + ++ + R+ ++ V+ L +
Sbjct: 293 LKEVVRRIPMAGSP-ALAGAKVLPLEGDLAKLACDKAAMAARIGDLGASVQRLLADHGAV 351
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR 360
VL+LGDL+W + + ++ E+ +L+ G + + W +G A +Y+R
Sbjct: 352 VLDLGDLKWL-----VDGPAAAASEAGKAVVSEMARLLRRFG-SGKVWAVGTAACATYLR 405
Query: 361 CKSGHPSLETLWSLHPLTIP--------------AGSLSLSLITTDSDLQSQSTSKKAES 406
CK HP++E W L + I G L S+ L+ + A
Sbjct: 406 CKVYHPTMEAEWDLQAVPIARSAPLAGAGLRSGGTGILGNSVGMLSPTLRPMPLTPTA-- 463
Query: 407 GVSWLLFEGEEEN--KQLTCCADCSAKFEAEARSLQSSSCNSDSPTS-------SLPAWL 457
+ W G + + T C C ++ E L + + PTS LP W+
Sbjct: 464 -LRWPPGAGSDHPLMAKPTMCMLCKGSYDRELAKLAAE--QKEKPTSCPEAVKPGLPHWM 520
Query: 458 QQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFS 517
Q ++ + + +L KKW C H + +P+ S +
Sbjct: 521 QPSSDQTQTKEQELKRKEAAEELEKKWRETCACTHGN----------RAGAPAVSLPLAA 570
Query: 518 YDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLS 577
+ P VEPK P+L++ K P S
Sbjct: 571 LASRPP-----------VEPKLQLARGGV-------------PTLKMNTSWDKPEGTPTS 606
Query: 578 SNRNSTPNSTSSSDIM-----EMEYVHKFKELN-SENLTS-----------------LCN 614
R S P S +D+ V K ++ N +E LT+ L
Sbjct: 607 ELRKSPPGSPVKTDLALGPLDPGATVEKDQKENYTEGLTAMQKAKIAGISDIESFKRLLK 666
Query: 615 ALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIA 674
L +KV WQ D IA V++CR+G+ +R+ + + + WL F G D K K+A
Sbjct: 667 VLTEKVSWQSDAASAIAAVVIQCRTGSGKRR-----NIGTRGDIWLLFVGPDQAGKRKMA 721
Query: 675 KELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHR 734
L+ L+ + V I S D K S ++R EAV NP
Sbjct: 722 NALSELMVNAQP--VVINFGGDSRLGKDGNAGFWGKTS--------LDRVTEAVRQNPCS 771
Query: 735 VFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPT 794
V ++E ++Q D + KRA+E+GR+ S G EVSLG+ + +L+ R
Sbjct: 772 VIVLEGIDQVDVVVRGKIKRAMETGRLPDSRGREVSLGNVVFVLTTNWLPEELR------ 825
Query: 795 KQKSDGCEEEKGAAMEGTSPSVSLDLNI 822
+ K + +++G E S + L+L+I
Sbjct: 826 RPKFETLLQDEGRMFEVASSNWQLELSI 853
>gi|413937154|gb|AFW71705.1| hypothetical protein ZEAMMB73_287089 [Zea mays]
Length = 647
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 296/576 (51%), Gaps = 96/576 (16%)
Query: 329 HIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL 388
H + E+ L C G+ WL+G ++QSYMRC++G PSLETLW L L +PAGSL+ SL
Sbjct: 107 HAVAEVRALACRGGDG--VWLVGYGSYQSYMRCRAGQPSLETLWGLQTLAVPAGSLAFSL 164
Query: 389 -----ITTDSDLQSQSTSKK--------------AESGVSWLLFEGEEENKQLT--CCAD 427
T + QS S K A +S L G ++ C AD
Sbjct: 165 NFVGDSATAMTINHQSISCKMAKCDDDRSGNGSAAPRCLSLLDAGGSGRLTAVSSFCAAD 224
Query: 428 CSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSI 487
CSA + C++ + SS+P WLQ ++ ++ + CKK +S
Sbjct: 225 CSA-----------TKCDA-TVKSSIPPWLQHCRDHQEPSR------------CKK-SST 259
Query: 488 CNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFL 547
C P + RT S S S+S SY+Q Y H++++ W +V EH
Sbjct: 260 CGG---SPSHHHRTALNFSTVVSPSSSVSSYEQHYHLRHQSYQPWLLVADGAREAEH--- 313
Query: 548 FSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSE 607
+K+ +++L++ + +D K PLS+ + + +S++S+ +E +FKEL++E
Sbjct: 314 ----PCNKARCSAAVQLHVVDDEDGK-PLSAIKVKSHDSSASNGSVECRS--RFKELSAE 366
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE-------VKEETWL 660
NL LC+ALEK+VPWQ + V +IA+TVL+CRSG RR+ S KE+TW+
Sbjct: 367 NLKVLCSALEKEVPWQAEIVPEIASTVLQCRSGMARRREAAVSSSRPSSTQACAKEDTWM 426
Query: 661 FFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR----ADSTEDSRNKRSR--- 713
F G DA+ K ++A+ELARLVFGS +FVSI S +++ +D + + + KR R
Sbjct: 427 LFHGGDAEGKARVARELARLVFGSRKSFVSIGGSRTTASSPACWSDGSSEQQRKRPRLTE 486
Query: 714 -DEQSCSYIERFAEAVSNNPHRVFLIEDVEQAD-YCSQKGFKRAIESGRIVTSSG-DEVS 770
C + E EAV +NPHRV L++DVEQ + Q+ AI+SG + + +G D+ +
Sbjct: 487 ASNHGCRH-ESLYEAVRDNPHRVILVQDVEQGGCWRCQRDILEAIQSGLVRSRAGDDDAA 545
Query: 771 LGDAIVILSCESFSSRSRACSPPTKQKS-------------DGCEEEKGA---AMEGTSP 814
LGDAIV+LSC+S + S SP T +K+ G K A A S
Sbjct: 546 LGDAIVVLSCQSLDAWSTTTSPLTTKKAKAESKEEPEEEESAGDHRRKEAITAAAASPSS 605
Query: 815 SVSLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFK 850
S+ DLN+ +++ TE D LL++VD+ F+
Sbjct: 606 SLCFDLNMDVENHDTES-CFTDASLLKAVDRTFFFR 640
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/109 (75%), Positives = 91/109 (83%), Gaps = 6/109 (5%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA--ASTGLLRTACLQ 58
MRAGGCT+QQ L+ EAA VVKQA++LARRRG+AQVTPLHVA+ ML A TGLLR ACLQ
Sbjct: 1 MRAGGCTVQQALSPEAAVVVKQAVSLARRRGNAQVTPLHVASAMLQQQAPTGLLRAACLQ 60
Query: 59 SHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF---PTISNALVA 104
SHSHPLQCKALELCFNVALNRLPAS S P+LGGH P++SNAL A
Sbjct: 61 SHSHPLQCKALELCFNVALNRLPASAS-PLLGGHGHVYYPPSLSNALHA 108
>gi|125548248|gb|EAY94070.1| hypothetical protein OsI_15846 [Oryza sativa Indica Group]
Length = 476
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 271/509 (53%), Gaps = 67/509 (13%)
Query: 371 LWSLHPLTIPAGSLSLSLITT--DSDLQSQSTSKKA--------ESGVSWLLFEGEEENK 420
+W L L +PAGSL+LSL DS L + + S KA S G
Sbjct: 1 MWGLQTLAVPAGSLALSLTCAFDDSALGAVNQSMKASPHTTDGNRPAPSCGPLLGGSHLL 60
Query: 421 QLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDL 480
C DCSA ++S S +SSLP+WLQ ++++ + + DL
Sbjct: 61 SRCCGGDCSAATTTHEHDTKASLPRSFVSSSSLPSWLQHCRDQQL------QESTHFADL 114
Query: 481 CKKWNSICNSIHKQPYYSERTLTFSS-ASPSSSTSGF-SYDQQYPNFHKTHRDW--AVVE 536
K W SIC ++ TL FS+ SP+SS S + H+ H W A ++
Sbjct: 115 GKTWGSICGKPSQR-----MTLHFSAPVSPASSISSYEHGHGHQQQQHQPHHSWLLADLD 169
Query: 537 PKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEME 596
K W+ P+ +D + + + +++ S +E+E
Sbjct: 170 AKHPWK------------------------PKREDDDDEKAKSHDDCSGASNGS--VEVE 203
Query: 597 YVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKE 656
+FKELN+ENL LC ALEK+VPWQK+ V ++A+ VL+CRSG +R+ + + +E KE
Sbjct: 204 CRSRFKELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRS-TEAKE 262
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDS-RNKRSR 713
ETWLFF G D KE++A+ELA LVFGS +F+S+ L + SS+ + S TED R+KR R
Sbjct: 263 ETWLFFLGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPR 322
Query: 714 DEQSCS----YIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ S Y+ER +AVS NPHRV LIEDVEQ D+ Q G K AI+ G + + +GDEV
Sbjct: 323 TTTTSSASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRSQAGDEV 382
Query: 770 SLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAA-------MEGTSPSVSLDLNI 822
+GDAI+ILSCESF +RSRA SP +K +EE + +E +PS DLN+
Sbjct: 383 GVGDAIIILSCESFEARSRAGSPLMNKKMKVEKEEANTSDHDHKLEIESGAPSSCFDLNL 442
Query: 823 CIDDDSTEDQ-SIDDIGLLESVDKRIIFK 850
++ D D+ S D+ LL +VD+ ++F+
Sbjct: 443 DMESDQAADELSSGDVCLLTAVDRVLLFR 471
>gi|18402202|ref|NP_565689.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
gi|3420054|gb|AAC31855.1| expressed protein [Arabidopsis thaliana]
gi|330253235|gb|AEC08329.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
Length = 1002
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 254/955 (26%), Positives = 420/955 (43%), Gaps = 169/955 (17%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ--SHSHP- 63
T +Q LT E A + A+++ARRR HAQ T LH + +L + +LR C+ +H+ P
Sbjct: 7 TARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRAAHNTPY 66
Query: 64 ---LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS--- 117
LQ +ALELC V+L+RLP+S STP + P +SN+L+AA KR+QA QRR
Sbjct: 67 SSRLQFRALELCVGVSLDRLPSSKSTPTTTVE-EDPPVSNSLMAAIKRSQATQRRHPETY 125
Query: 118 ------IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
N + +K+EL+ I+SILDDP VSRV EAGF ST +K +V + +
Sbjct: 126 HLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDV---LHPPV 182
Query: 172 CSQSTPVSSNKSKESNVLV--LSQTASA-TKVSKPRVSLDPIRNEDVMYVIENLMSKRKR 228
SQ + +++S+ + + L ++ S + P LD E+ + E L K K+
Sbjct: 183 TSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFGDLD----ENCRRIGEVLARKDKK 238
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFR----HMNRVEVEQR 284
N ++VG C +E ++ D I +G LPL IS ++ V V+
Sbjct: 239 NPLLVGVC--GVEA-LKTFTDSINRG-------KFGFLPLEISGLSVVSIKISEVLVDGS 288
Query: 285 VEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN 344
+IK L G+VLNLG+L+ S + IE ++++ L+ E
Sbjct: 289 RIDIKFDDLGRLKSGMVLNLGELKVLASDVFSVD-------VIEKFVLKLADLLKLHRE- 340
Query: 345 ARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI--------PAGSLSLSLITTDSDL 395
+ W +G +++ ++Y++ P+++ W+LH L I P SL S +
Sbjct: 341 -KLWFIGSVSSNETYLKLIERFPTIDKDWNLHLLPITSSSQGLYPKSSLMGSFVPFGGFF 399
Query: 396 QSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSL-QSSSCNSDSPTSSLP 454
S S + S N+ L C C+ K+E E + +S S D + LP
Sbjct: 400 SSTSDFRIPSSS---------SMNQTLPRCHLCNEKYEQEVTAFAKSGSMIDDQCSEKLP 450
Query: 455 AWLQQYKNE-KKATLSNNDKD-----SGVRDLCKKWNSICNSIHKQPYYSERTLTFSSAS 508
+WL+ ++E +K L D S + L KKW+ IC IH+ P + + L+F
Sbjct: 451 SWLRNVEHEHEKGNLGKVKDDPNVLASRIPALQKKWDDICQRIHQTPAFPK--LSFQPVR 508
Query: 509 PSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI-- 566
P S Q + +S++ L +P L + I
Sbjct: 509 PQFPLQLGSSSQTKMSLGSPTEKIVCTRTSESFQGMVAL-----PQNPPHQPGLSVKISK 563
Query: 567 PEH-KDL-----KQPLS------------SNRNSTPNSTSSSDIMEMEYVHKFKELNS-- 606
P+H +DL PLS +++N P++ S + + E + + + L++
Sbjct: 564 PKHTEDLSSSTTNSPLSFVTTDLGLGTIYASKNQEPSTPVSVERRDFEVIKEKQLLSASR 623
Query: 607 --ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQG 664
++ SL L +KV +Q + V I+ V R + RR +H WL G
Sbjct: 624 YCKDFKSLRELLSRKVGFQNEAVNAISEIVCGYRDESRRR----NNHVATTSNVWLALLG 679
Query: 665 VDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERF 724
D K+K+A LA + G +NF+ + S +DS + R R + YI
Sbjct: 680 PDKAGKKKVALALAEVFCGGQDNFICVDFKS---------QDSLDDRFRGKTVVDYI--- 727
Query: 725 AEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFS 784
A V+ V IE+VE+A++ Q A+ +G++ S G E+S+ + IV+ + S S
Sbjct: 728 AGEVARRADSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGREISMKNVIVVATI-SGS 786
Query: 785 SRSRAC----------------------------------SPPTKQKSDGCEEEKGAAME 810
++ C + P K++ + E E
Sbjct: 787 DKASDCHVLEEPVKYSEERVLNAKNWTLQIKLADTSNVNKNGPNKRRQEEAETEVTELRA 846
Query: 811 GTSPSVSLDLNICIDD-DSTEDQS----------IDDIGLLESVDKRIIFKIMEL 854
S LDLN+ +D+ ++ ED++ ++D +E VD ++ FK+++
Sbjct: 847 LKSQRSFLDLNLPVDEIEANEDEAYTMSENTEAWLED--FVEQVDGKVTFKLIDF 899
>gi|14532596|gb|AAK64026.1| unknown protein [Arabidopsis thaliana]
Length = 1002
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 254/955 (26%), Positives = 420/955 (43%), Gaps = 169/955 (17%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ--SHSHP- 63
T +Q LT E A + A+++ARRR HAQ T LH + +L + +LR C+ +H+ P
Sbjct: 7 TARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRAAHNTPY 66
Query: 64 ---LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS--- 117
LQ +ALELC V+L+RLP+S STP + P +SN+L+AA KR+QA QRR
Sbjct: 67 SSRLQFRALELCVGVSLDRLPSSKSTPTTTVE-EDPPVSNSLMAAIKRSQATQRRHPETY 125
Query: 118 ------IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
N + +K+EL+ I+SILDDP VSRV EAGF ST +K +V + +
Sbjct: 126 HLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDV---LHPPV 182
Query: 172 CSQSTPVSSNKSKESNVLV--LSQTASA-TKVSKPRVSLDPIRNEDVMYVIENLMSKRKR 228
SQ + +++S+ + + L ++ S + P LD E+ + E L K K+
Sbjct: 183 TSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFGDLD----ENCRRIGEVLARKDKK 238
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFR----HMNRVEVEQR 284
N ++VG C +E ++ D I +G LPL IS ++ V V+
Sbjct: 239 NPLLVGVC--GVEA-LKTFTDSINRG-------KFGFLPLEISGLSVVSIKISEVLVDGS 288
Query: 285 VEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN 344
+IK L G+VLNLG+L+ S + IE ++++ L+ E
Sbjct: 289 RIDIKFDDLGRLKSGMVLNLGELKVLASDVFSVD-------VIEKFVLKLADLLKLHRE- 340
Query: 345 ARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI--------PAGSLSLSLITTDSDL 395
+ W +G +++ ++Y++ P+++ W+LH L I P SL S +
Sbjct: 341 -KLWFIGSVSSNETYLKLIERFPTIDKDWNLHLLPITSSSQGLYPKSSLMGSFVPFGGFF 399
Query: 396 QSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSL-QSSSCNSDSPTSSLP 454
S S + S N+ L C C+ K+E E + +S S D + LP
Sbjct: 400 SSTSDFRIPSSS---------SMNQTLPRCHLCNEKYEQEVTAFAKSGSMIDDQCSEKLP 450
Query: 455 AWLQQYKNE-KKATLSNNDKD-----SGVRDLCKKWNSICNSIHKQPYYSERTLTFSSAS 508
+WL+ ++E +K L D S + L KKW+ IC IH+ P + + L+F
Sbjct: 451 SWLRNVEHEHEKGNLGKVKDDPNVLASRIPALQKKWDDICQRIHQTPAFPK--LSFQPVR 508
Query: 509 PSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI-- 566
P S Q + +S++ L +P L + I
Sbjct: 509 PQFPLQLGSSSQTKMSLGSPTEKIVCTRTSESFQGMVAL-----PQNPPHQPGLSVKISK 563
Query: 567 PEH-KDL-----KQPLS------------SNRNSTPNSTSSSDIMEMEYVHKFKELNS-- 606
P+H +DL PLS +++N P++ S + + E + + + L++
Sbjct: 564 PKHTEDLSSSTTNSPLSFVTTDLGLGTIYASKNQEPSTPVSVERRDFEVIKEKQLLSASR 623
Query: 607 --ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQG 664
++ SL L +KV +Q + V I+ V R + RR +H WL G
Sbjct: 624 YCKDFKSLRELLSRKVGFQNEAVNAISEIVCGYRDESRRR----NNHVATTSNVWLALLG 679
Query: 665 VDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERF 724
D K+K+A LA + G +NF+ + S +DS + R R + YI
Sbjct: 680 PDKAGKKKVALALAEVFCGGQDNFICVDFKS---------QDSLDDRFRGKTVVDYI--- 727
Query: 725 AEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFS 784
A V+ V IE+VE+A++ Q A+ +G++ S G E+S+ + IV+ + S S
Sbjct: 728 AGEVARRAGSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGREISMKNVIVVATI-SGS 786
Query: 785 SRSRAC----------------------------------SPPTKQKSDGCEEEKGAAME 810
++ C + P K++ + E E
Sbjct: 787 DKASDCHVLEEPVKYSEERVLNAKNWTLQIKLADTSNVNKNGPNKRRQEEAETEVTELRA 846
Query: 811 GTSPSVSLDLNICIDD-DSTEDQS----------IDDIGLLESVDKRIIFKIMEL 854
S LDLN+ +D+ ++ ED++ ++D +E VD ++ FK+++
Sbjct: 847 LKSQRSFLDLNLPVDEIEANEDEAYTMSENTEAWLED--FVEQVDGKVTFKLIDF 899
>gi|293335257|ref|NP_001170618.1| uncharacterized protein LOC100384662 [Zea mays]
gi|238006394|gb|ACR34232.1| unknown [Zea mays]
Length = 440
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 244/450 (54%), Gaps = 66/450 (14%)
Query: 424 CCADCSA-KFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCK 482
C DCSA + E +L + S +SSLP+WLQ ++ ++ D DL K
Sbjct: 30 CGGDCSAARIETTKAALPRTPFVS---SSSLPSWLQHCRDHQEPATHLTD------DLGK 80
Query: 483 KWNSICNSIHKQPYYSERTLTFSS-ASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSW 541
W+SIC+S + TL FS+ SP+SS S + H +P+ SW
Sbjct: 81 TWSSICSSSRPSQRTT--TLHFSAPVSPASSISSYE-----------HGGGQSQQPRHSW 127
Query: 542 REHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKF 601
+H + E S+R + +S +S+ +E+E +F
Sbjct: 128 LLAGLDAAHHPW-RPKREASIRSH-------------------DSGASNGSVEVECRARF 167
Query: 602 KELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLF 661
KELN+ENL LC ALEK+VPWQK+ V ++A+ VL+CRSG +R+ K + ++ KEETW+
Sbjct: 168 KELNAENLKLLCGALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDKSRS-ADAKEETWML 226
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF------SSTRADSTEDSRN-KRSR- 713
F G DAD KE++A+ELARLVFG ++F+SI + S+E R+ KR R
Sbjct: 227 FLGGDADGKERVARELARLVFGLRSSFLSIRPGGVVSASSPPPASSGSSEGHRSSKRPRM 286
Query: 714 --DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
+E + Y+ER EAVS NPHRV +EDVE+AD Q K AIESG + +G EV +
Sbjct: 287 PEEEPAAYYLERLHEAVSENPHRVIFMEDVERADRDCQLRIKEAIESGVVRNHAGQEVGV 346
Query: 772 GDAIVILSCESF--SSRSRACSPPTKQ---KSDGCEEEKGAAMEGTSPSVS------LDL 820
GDAIVILSCESF S SRACSPP+K+ + + +EE+ E VS +DL
Sbjct: 347 GDAIVILSCESFGDSRSSRACSPPSKKVKVEMEEAKEERAGDHEHNQDGVSKPSPSCIDL 406
Query: 821 NICIDDDSTEDQSIDDIGLLESVDKRIIFK 850
N+ ++ D ++ S+ D LL +VD+ + F+
Sbjct: 407 NVDMESDQADEPSLGDQCLLTAVDRALFFR 436
>gi|297611270|ref|NP_001065796.2| Os11g0156800 [Oryza sativa Japonica Group]
gi|255679806|dbj|BAF27641.2| Os11g0156800, partial [Oryza sativa Japonica Group]
Length = 467
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 264/516 (51%), Gaps = 68/516 (13%)
Query: 353 ATFQSYMRCKS-GHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWL 411
++Q YM+C++ G P LE +W LHP+ +P G L+LSL +++ SQ+T + A W
Sbjct: 1 GSYQVYMKCRAAGQPPLEAVWELHPVVVPDGGLALSLTCSEA---SQATHQAAAPTAGWP 57
Query: 412 LFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNN 471
++ + SPT +P WL++Y++ AT ++
Sbjct: 58 F-----------------------VNGAGEAAATTASPT--IPPWLRRYQDPDHATPASC 92
Query: 472 DKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFS--YDQQYPNFHKTH 529
++DL WN + N P+++ S+ SS SG++ Y+ N +
Sbjct: 93 GTGLQIQDL---WNPMRNG--SAPHHTSELTLSFSSPSPSSISGYTSCYNN---NNMMSS 144
Query: 530 RDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSS 589
+ W + E +Q W H HE R+ + + D PL +N + NS S+
Sbjct: 145 KPWQL-EARQPWPIH----GHEGQ---------RMAMASYHD-HHPLDTNPSPESNSVSN 189
Query: 590 SDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFK 649
S KF ELN+ENL LCNALE +VP + V DIA+TVL+CRSG + K + K
Sbjct: 190 SLDGGETRRPKFIELNAENLKILCNALESRVPQHSNIVPDIASTVLQCRSGMKKMKLRHK 249
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDS-- 707
+ + TWL FQG D D K+ +A+ELA+LVFGS F SI+ +S +DS+
Sbjct: 250 EIIKASSTTWLLFQGRDVDGKKAMAQELAKLVFGSSTEFSSISFDELTSPYSDSSSGELT 309
Query: 708 -RNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSG 766
+ +RS D S+ +R E VS NPH+V +I D+EQ D S+ K+AI +GR+ +G
Sbjct: 310 LKRQRSADSNEHSFAQRLCEIVSKNPHQVIVINDIEQLDQDSEISIKKAIANGRMRGCTG 369
Query: 767 DEVSLGDAIVILSCES--FSSRSRACSPPTKQK--SDGCEEEKGAAMEG-TSPS-VSLDL 820
+EV DAI++LS E S + SP KQ+ ++ +EE + +G SP SLDL
Sbjct: 370 EEVDFEDAIIVLSYEEEFDSRSRASSSPRVKQRLMNNNDDEESSSTEKGDNSPQRFSLDL 429
Query: 821 NICIDDDSTEDQS---IDD-IGLLESVDKRIIFKIM 852
N C++D+ ED+ ID+ +G+ + VD F +M
Sbjct: 430 NACLEDEE-EDEGFLLIDNGVGMHDIVDGVFFFGLM 464
>gi|16604653|gb|AAL24119.1| unknown protein [Arabidopsis thaliana]
gi|28393849|gb|AAO42332.1| unknown protein [Arabidopsis thaliana]
Length = 920
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 256/482 (53%), Gaps = 99/482 (20%)
Query: 92 HCQFPTISNALVAAFKRAQAHQRRGSIENQQQP----------LLAVKIELEQLIISILD 141
H Q P+++NALVAA KRAQAHQRRG IE QQQ LLAVK+ELEQL+ISILD
Sbjct: 3 HGQ-PSLANALVAALKRAQAHQRRGCIEQQQQTQTHPQTQQTQLLAVKVELEQLVISILD 61
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQ-----------AVSLEICSQSTPVSS---------- 180
DPSVSRVMREAGF+ST VKS VE AV + S ++P
Sbjct: 62 DPSVSRVMREAGFNSTAVKSCVEDCSVSSVFYGGSAVGV-FSSPNSPDQQQQHHNSINRL 120
Query: 181 ------------------------NKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVM 216
N+S + N L+LS +AS + +R D+
Sbjct: 121 HHYQNPKDFNFINPNFPLWQTHFLNQSPDQNPLLLSSSASHHHQQQR------LREIDLK 174
Query: 217 YVIENLMSKR--KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA--LRDVKCLPLSISS 272
V++ LM K+ K+N V+VG+ ++ EG V ++ K+E+G++ + L+ + S
Sbjct: 175 LVVDVLMRKKTKKKNPVIVGDSISFTEGFVSELMAKLERGEIDQTGELKQTHFVKFHFSP 234
Query: 273 F--RHMNRVEVEQRVEEIKNLVRSCL--GRGIVLNLGDLEWA--EFRASSS---EQVRGY 323
+ M R +VE ++E++ V S G+ ++ GDL+W E ++S ++
Sbjct: 235 MASKFMRREDVELNIKELRKKVLSLTTSGKNAIIFTGDLKWTVKEITNNNSGGINEISSS 294
Query: 324 YCSIEHIIMEIGKLV--CGIG------ENARFWLMGIATFQSYMRCKSGHPSLETLWSLH 375
Y ++H++ EIGKL+ C + + W+MG A+FQ+YMRC+ PSLETLW+LH
Sbjct: 295 YSPLDHLVEEIGKLITECNDDGDDDDCKTRKVWVMGTASFQTYMRCQMRQPSLETLWALH 354
Query: 376 PLTIP-AGSLSLSL-ITTDSDLQSQSTSKKAESGVSWLLFEGEEE-NKQLTCCADCSAKF 432
P+++P + +L LSL T+ + ++ ST +S + E EE + L+CC +C F
Sbjct: 355 PVSVPSSANLGLSLHATSGHEARNMSTVNATKSLSGYDKAEEEETISHVLSCCPECVTSF 414
Query: 433 EAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIH 492
+ EA+SL++ N D LP+WLQ + + S++ KD + L +KWN C ++H
Sbjct: 415 DREAKSLKA---NQD---KLLPSWLQSHDAD-----SSSQKDE-LMGLKRKWNRFCETLH 462
Query: 493 KQ 494
Q
Sbjct: 463 NQ 464
>gi|357479513|ref|XP_003610042.1| Heat shock protein-related-like protein [Medicago truncatula]
gi|355511097|gb|AES92239.1| Heat shock protein-related-like protein [Medicago truncatula]
Length = 820
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 138/178 (77%), Gaps = 14/178 (7%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR+GGC +QQ LTAEAASV+K ++ LARRRGH QVTPLHVA T+L + ACL+SH
Sbjct: 1 MRSGGCALQQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSH 60
Query: 61 -------SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQ 113
HPLQ +ALELCFNVALNRLP +T +P++ H Q P++SNAL+AA KRAQAHQ
Sbjct: 61 QPHHQTSQHPLQSRALELCFNVALNRLP-TTPSPLI--HSQ-PSLSNALIAALKRAQAHQ 116
Query: 114 RRGSIE---NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS 168
RRGSIE QQ +L VK+ELEQLIISILDDPSVSRVMREAGFSST VK+N+E + S
Sbjct: 117 RRGSIEQQQQHQQTVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVKNNLEDSFS 174
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 154/364 (42%), Gaps = 69/364 (18%)
Query: 421 QLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDL 480
+L CC +C++ +E EA+ L+ + +LP WLQ + E++ +KD+ + +L
Sbjct: 288 KLNCCEECASNYEKEAQFLRPAG-----QKKTLPFWLQSHGTEEQ------NKDA-LTEL 335
Query: 481 CKKWNSICNSIHK----QPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVE 536
+KWN +C+ +H+ Q +++ SS +SS+ P F +
Sbjct: 336 KRKWNRLCHCLHQNKQHQNHWNRSNNNHSSNLNNSSSIISHTSNLTPRFRR--------- 386
Query: 537 PKQSWREHHFLFSHEASDKSTSEPSL-RLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEM 595
+QS F F+ + + T++P + E K++K L+ + + + +
Sbjct: 387 -QQSCSTIEFNFNDK---RETTKPVFDSIASMEGKEVKISLALGNDDSSEKVGNITDTAL 442
Query: 596 EYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVK 655
+ H +C L++ VPWQ +T+ I+ + +S T + F+
Sbjct: 443 QQAH------------VCKLLQENVPWQSETIPSISKALFDTKS-TKLNEISFR------ 483
Query: 656 EETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDE 715
WLF QG D +K ++A +A VFGS + + + + ++
Sbjct: 484 ---WLFLQGNDFISKRRLALGIAESVFGSADLVLQLDM-----------------LKKET 523
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ E A+ + V LIE+V+ AD K E G+ T S E +LG I
Sbjct: 524 LIAPFSEMLLGALRKHQQLVVLIENVDSADTQFMKFLSDGYEKGKFETLSNKEGNLGQVI 583
Query: 776 VILS 779
IL+
Sbjct: 584 FILT 587
>gi|224059278|ref|XP_002299803.1| predicted protein [Populus trichocarpa]
gi|222847061|gb|EEE84608.1| predicted protein [Populus trichocarpa]
Length = 1025
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 226/837 (27%), Positives = 375/837 (44%), Gaps = 112/837 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPL---- 64
+Q LT EAA + +A+ +ARRR H Q T LH + +LA LR AC ++ ++
Sbjct: 9 RQCLTDEAARALDEAVAVARRRNHCQTTSLHAVSALLALPASTLRDACSRATTNAFSSRR 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR-------GS 117
Q +AL+L V+L+RLP+S + + P ISN+L+AA KR+QA+QRR
Sbjct: 69 QFRALDLSVGVSLDRLPSSRTLD------EDPPISNSLMAAIKRSQANQRRHPDNFHLHQ 122
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
I QQ +K+E++ I+SILDDP VSRV EAGF S +K + + S+ +P
Sbjct: 123 IHCNQQAASVLKVEMKHFILSILDDPIVSRVFGEAGFRSYDIKIAIVHP-PVSQSSKYSP 181
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRN----------EDVMYVIENLMSK-- 225
V N+ ++ T +P P + + + E L+ +
Sbjct: 182 VGCAPIFLCNL----PGSNITGPGRPPGFSFPFSSGLDDDDVGDDDVCRRIGEALVRRDG 237
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEK----GDVPEALRDVKCLPLSISSFRHMNRVEV 281
+ RN ++VG + ++G +D + K G +P + V + + ++ +
Sbjct: 238 KGRNLLLVGVYASK---ALKGFVDSVNKENKGGVLPSEINGVSVISIEDEIIHFVSELGG 294
Query: 282 EQ-----RVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGK 336
++ + EE+ + G GIV+N GD+ + E V G ++ +++ ++
Sbjct: 295 DKEKMGLKFEELGQELEQYSGPGIVVNFGDM-----KVLVGENVCGD--AVSYLVSKLTS 347
Query: 337 LVCGIGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTI-----PAG------SL 384
L+ G + WL+G A ++ +Y++ S+E W L L I P G SL
Sbjct: 348 LLEGF--RGKIWLVGTADSYDTYLKSVGRFSSVEKDWDLRVLPIASYKSPVGDFSSKSSL 405
Query: 385 SLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARS---LQS 441
S + + S KK + + N+ + CC C+AK+E + + + S
Sbjct: 406 LGSFVPFGGFFSTPSDFKKPTNSI----------NQSIICCHLCNAKYEKDVAAILKMGS 455
Query: 442 SSCNSDSPTSSLPAWLQ--QYKNEKKATLSNNDKDSG----VRDLCKKWNSICNSIHK-Q 494
++ +D + LP+ LQ + K D D+ + L KWN IC +H Q
Sbjct: 456 TTSVADQSSEKLPSLLQMAELDTGKAVDAVKVDDDTALNAKILGLRNKWNDICQRLHHAQ 515
Query: 495 PYY----SERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSH 550
P++ S+ T S A S + + N H + + V KQ +E +
Sbjct: 516 PFFKFDVSQATSQVSIAEGFQSKHCVDSETEDVN-HGSKQLEEVPRLKQKEKESPWFTPC 574
Query: 551 EASDKSTSEPSLR------LYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKEL 604
S+ S PS R + H L L + N T D ME++ F
Sbjct: 575 PLSN--VSLPSDRTSSSSVTSVTTHLGLGT-LYATSAQEHNITKLRD--PMEHLQHFSGS 629
Query: 605 NS-ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
S E+ S+ A+ +KV WQ Y I V +C++G R G S K +
Sbjct: 630 GSAEDFKSVMRAISEKVGWQDRATYAIGEAVSRCKAGHGRHHG-----SNSKGDISFILL 684
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS-TRADSTEDSRNKRSRDE--QSCSY 720
G D K+KIA LA ++FGS +F+S+ L S + ++S DS+ + DE +S ++
Sbjct: 685 GPDRIGKKKIASALAEVMFGSTQSFISLDLGSHDKVSSSNSIFDSQELQYDDELGRSMTF 744
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++R A +S PH + +E++++AD Q A+ +GR S G EVS + I +
Sbjct: 745 VDRIASKLSKKPHSLIFLENIDKADPLVQHSLSYALRTGRFPDSRGREVSTNNTIFV 801
>gi|297849012|ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
gi|297338229|gb|EFH68646.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 230/858 (26%), Positives = 375/858 (43%), Gaps = 184/858 (21%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ------SH 60
T ++ LT EAA + A+ +ARRR HAQ T LH + +LA + +LR C+ +
Sbjct: 7 TARECLTEEAARALDDAVAVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRAARSTPY 66
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
S LQ +ALELC V+L+RLP+S S + P +SN+L+AA KR+QA+QRR
Sbjct: 67 SSRLQFRALELCVGVSLDRLPSSKSP----ATEEDPPVSNSLMAAIKRSQANQRRHPETY 122
Query: 121 QQQPLLA------------VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS 168
Q + A +K+EL+ I+SILDDP V+RV EAGF S+ +K +V
Sbjct: 123 HLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSDIKLDVLHP-- 180
Query: 169 LEICSQSTPVSSNKSKESN----VLVLSQTASATKVSKPRVSLDPIR----------NED 214
PV+ S+ S L L ++ DP R +E+
Sbjct: 181 --------PVTQFSSRFSRGRCPPLFLCNLPNS----------DPNREFPFCGSSGFDEN 222
Query: 215 VMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPL------ 268
+ E L K K+N ++VG C ++ D I G + D+ L L
Sbjct: 223 SRRIGEVLGRKDKKNPLLVGNCANE---ALKTFTDSINTGKLGFLPMDISGLSLISIEKE 279
Query: 269 --SISSFRHMNRVEVEQRVEEIKNLVRSCLGR-GIVLNLGDLEWAEFRASSSEQVRGYYC 325
I + N E+ +V+++ +V + GI+LNLG+L+ A++
Sbjct: 280 ISEILADGSKNEEEIRVKVDDLGRIVEQNGSKSGIMLNLGELKVLTSEANA--------- 330
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSL 384
++E+++ ++ L+ ++ + W +G +++ ++Y + P++E W LH L
Sbjct: 331 ALENLVSKLSDLL--KHQSKKLWFIGCVSSNETYTKLIDRFPTIEKDWDLHVLP------ 382
Query: 385 SLSLITTDSDLQSQSTSKKAESGVSWLLFEG-------------EEENKQLTCCADCSAK 431
IT + SQ K+ S++ F G N+ L+ C C+ K
Sbjct: 383 ----ITASTKPSSQGVYPKSSLMGSFVPFGGFFSSTSDFRVPLSSTVNQTLSRCHLCNEK 438
Query: 432 FEAE-ARSLQSSSCNS--DSPTSSLPAWLQ--QYKNEKKATLSN------NDKDSGVRDL 480
+ E A L++SS S D + LP WL+ + K +K T S+ N S L
Sbjct: 439 YLQEVAAVLKASSSLSLADQCSEKLPPWLRAVETKEDKGTTGSSKALDDANTSASQTAAL 498
Query: 481 CKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQS 540
KKW++IC SIH P + L F S S Q+P V+ ++S
Sbjct: 499 QKKWDNICQSIHHTPAIPK--LGFQSVS-----------SQFP-----------VQTEKS 534
Query: 541 WR-EHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI-MEMEYV 598
R FL + + + S+P +DL +++ S+P S ++D + + Y
Sbjct: 535 VRTPTSFLETSKLLNPPISKPK------PMEDLTTSVTNRTVSSPLSCVTTDFGLGVIYA 588
Query: 599 HKFKE------------LNS-------ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRS 639
K +E LNS ++ SL L +KV WQ + V I+ + C++
Sbjct: 589 SKNQESKTAREKPLLVTLNSSLEHTYQKDFKSLRELLSRKVAWQTEAVNAISQIICGCKT 648
Query: 640 GTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSST 699
+ RR WL G D K+K+A L+ + FG N + + F +
Sbjct: 649 DSTRRNQ--------ASGIWLALLGPDKVGKKKVAMALSEVFFGGQVNCICV---DFGAE 697
Query: 700 RADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESG 759
+ R K + ++ +S PH V L+E+VE+AD+ Q A+ +G
Sbjct: 698 HCFLDDKFRGK--------TVVDYITAELSRKPHSVVLLENVEKADFPDQMRLSEAVSTG 749
Query: 760 RIVTSSGDEVSLGDAIVI 777
+I S G +S+ + IV+
Sbjct: 750 KIRDSHGRVISMKNVIVV 767
>gi|297745889|emb|CBI15945.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 218/818 (26%), Positives = 350/818 (42%), Gaps = 131/818 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LT EAA + A+ +ARRR HAQ T LH + +LA + LR AC + ++S L
Sbjct: 9 RQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARARSSAYSPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS----IEN 120
Q +ALEL V+L+RLP+S + + P +SN+L+AA KR+QA QRR ++
Sbjct: 69 QFRALELSVGVSLDRLPSSKA-------LEEPPVSNSLMAAIKRSQASQRRHPENFHLQQ 121
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
Q Q +++EL+ I+SILDDP VSRV EAGF S +K + Q +PVS
Sbjct: 122 QNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIQP-------PLSPVSR 174
Query: 181 NKSKESNVLVLSQTASATKVSK------PRVSLDPIRNEDVMYVIENLMSKRKRNFVVVG 234
+ L + + VS +E+ + E L K +N +++G
Sbjct: 175 FPRTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLTRKTGKNPLLIG 234
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRS 294
C + +ALR C R + ++ +++E+ ++
Sbjct: 235 VCSS-------------------DALR---CFADCFVG-RGGSEDKLGLKLKELGHMAEQ 271
Query: 295 CLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMG-IA 353
G GI +N G+L +A + G S + KL + + WLMG
Sbjct: 272 YSGPGIAVNFGEL-----KALVGDDAPGEAAS-----FVVSKLTSLLKAHPNLWLMGSSG 321
Query: 354 TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLF 413
++++Y++ + PS+E W LH L I + S+ + S L S++ F
Sbjct: 322 SYETYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSRSSLMG-----------SFVPF 370
Query: 414 EG------------EEENKQLTCCADCSAKFEAEARSL---QSSSCNSDSPTSSLPAWLQ 458
G N+ +T C C+ K E E ++ S+ +D + +LP+WL
Sbjct: 371 AGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSGTLPSWLL 430
Query: 459 QYK-NEKKATLSNNDKDSG------VRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSS 511
+ + K + KD G V + KKW IC +H P Y + P
Sbjct: 431 MAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLHHAPPYPKSIFQPVPQIPLP 490
Query: 512 STSGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFS-------HEASDKSTSEPSLRL 564
S + + NF ++ +V + KQ FS A D+++S S
Sbjct: 491 VVS----ESESVNF-QSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAPDRTSS--SCIT 543
Query: 565 YIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQK 624
+ L +SN T M Y ++++ + SL AL KV WQ
Sbjct: 544 SVTTDLGLGTLYASNSQETKRLNLQGHKERMNYFS--GQMDARDFKSLWRALASKVGWQD 601
Query: 625 DTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGS 684
+ + I+ TV CR+G RR G S +K + WL F G D K++IA LA ++F S
Sbjct: 602 EAICAISQTVSSCRTGNARRHG-----SNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRS 656
Query: 685 HNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQA 744
+ VS+ L ++ + R + YI A + P V +E++++A
Sbjct: 657 SKSLVSVDLG------------YQHGKFRGKTITDYI---AGELRKKPQLVVFLENIDKA 701
Query: 745 DYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
D Q +AI +G+ S G E+S+ I + + S
Sbjct: 702 DLLVQTSLSQAIRTGKFPDSHGREISINHMIFVTTATS 739
>gi|297822717|ref|XP_002879241.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
gi|297325080|gb|EFH55500.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
Length = 1007
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 229/846 (27%), Positives = 360/846 (42%), Gaps = 142/846 (16%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ--SHSHP- 63
T +Q LT E A + A+++ARRR HAQ T LH + +L + +LR C+ +H+ P
Sbjct: 7 TARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRAAHNTPY 66
Query: 64 ---LQCKALELCFNVALNRLPASTSTPMLGGHC----QFPTISNALVAAFKRAQAHQRRG 116
LQ +ALELC V+L+RLP+S S P + P +SN+L+AA KR+QA QRR
Sbjct: 67 SSCLQFRALELCVGVSLDRLPSSKSPPPPTTTTTTVEEDPPVSNSLMAAIKRSQATQRRH 126
Query: 117 ----------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQA 166
N Q +K+EL+ I+SILDDP VSRV EAGF ST +K +V
Sbjct: 127 PETYHLHQIHGNNNNTQTTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDVLHP 186
Query: 167 VSLEICSQSTPVSSNKSKESNV------LVLSQTASA----TKVSKPRVSLDPIRNEDVM 216
PV+S S + L L + + P LD E+
Sbjct: 187 ----------PVTSQFSSRFSSRSRIPPLFLCNLPESDPGRVRFGFPLGDLD----ENCR 232
Query: 217 YVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFR-- 274
+ E L K K+N ++VG C ++ D I +G LPL IS
Sbjct: 233 RIGEVLGRKDKKNPLLVGVCGGE---ALKTFTDSINRG-------KFGFLPLEISGLSVV 282
Query: 275 --HMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIM 332
++ V V+ +IK L G+VLNLG+L+ S +E ++
Sbjct: 283 SIEISEVLVDGSRIDIKFDDLGRLKSGMVLNLGELKVLTSDVFS-------VSVVEKFVL 335
Query: 333 EIGKLVCGIGENARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI--------PAGS 383
++ L+ E + W +G +++ ++Y++ P ++ W+LH L I P S
Sbjct: 336 KLSDLLKLHSE--KLWFIGSVSSNETYLKLIEKFPMIDKDWNLHLLPITSSSQGVYPKSS 393
Query: 384 LSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSL-QSS 442
L S + S S + S N+ L C C+ K+E E + +S
Sbjct: 394 LMGSFVPFGGFFSSTSDFRVPFSN---------SMNQSLPRCHLCNEKYEQEVTAFAKSG 444
Query: 443 SCNSDSPTSSLPAWLQQYKNEK-KATLSNNDKD-----SGVRDLCKKWNSICNSIHK--- 493
S D + LP+WL+ ++E+ K +L D S + L KKW+ IC IH+
Sbjct: 445 SSLDDQCSEKLPSWLRNVEHEQDKGSLGKVKDDPNVLVSRIPALQKKWDDICQRIHQTPA 504
Query: 494 ------QPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVV-------EPKQS 540
QP + L S+S S + G S +Q + + +P S
Sbjct: 505 FPKLSFQPVRPQFPLQLVSSSQSKMSLGSSTEQSVRSIRTSESFQGTAQVQNPPHQPGLS 564
Query: 541 WREHHFLFSHEASDKSTSEP------SLRL---YIPEHKDLKQPLSSNRNSTPNSTSSSD 591
+ + + + ++T+ P L L Y +++D P+S R
Sbjct: 565 LKISKPTHTEDLTSRTTNSPLSCVTTDLGLGTIYASKNQDSNTPVSLERKDFEVIKEKQS 624
Query: 592 IMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDH 651
++ Y FK SL L +KV +Q + V I+ V R + RR ++
Sbjct: 625 LVAPRYCKDFK--------SLRELLSRKVGFQNEAVNAISEIVCGYRDESRRR-----NN 671
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR 711
WL G D K+K+A LA + +NF+ + S +D+ + R
Sbjct: 672 IATTSNVWLALLGPDKAGKKKVASALADVFCSGQDNFICVDFKS---------QDNLDDR 722
Query: 712 SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
R + YI A V+ V IE+VE+A++ Q A+ +G++ S G E+S+
Sbjct: 723 FRGKTVVDYI---ASEVATRADSVVFIENVEKAEFPDQIRLSDAMRTGKLRDSHGREISM 779
Query: 772 GDAIVI 777
+ IV+
Sbjct: 780 KNVIVV 785
>gi|145323770|ref|NP_001077474.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|8954026|gb|AAF82200.1|AC067971_8 Strong similarity to an unknown protein F23F1.11 gi|7486038 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. ESTs
gb|T75672, gb|N65732 and gb|AA404793 come from this gene
[Arabidopsis thaliana]
gi|332189971|gb|AEE28092.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 222/850 (26%), Positives = 373/850 (43%), Gaps = 164/850 (19%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ------SH 60
T ++ LT EAA + A+ +ARRR HAQ T LH + +LA + +LR C+ +
Sbjct: 7 TARECLTEEAARALDDAVVVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRAARSVPY 66
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
S LQ +ALELC V+L+RLP+S S + P +SN+L+AA KR+QA+QRR
Sbjct: 67 SSRLQFRALELCVGVSLDRLPSSKSP----ATEEDPPVSNSLMAAIKRSQANQRRHPESY 122
Query: 121 QQQPLLA------------VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS 168
Q + A +K+EL+ I+SILDDP V+RV EAGF S+++K +V
Sbjct: 123 HLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSEIKLDVLHP-- 180
Query: 169 LEICSQSTPVSSNKSKESN----VLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMS 224
PV+ S+ S L L ++ + S +E+ + E L
Sbjct: 181 --------PVTQLSSRFSRGRCPPLFLCNLPNSDPNREFPFSGSSGFDENSRRIGEVLGR 232
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPL--------SISSFRHM 276
K K+N +++G C ++ D I G + D+ L L I +
Sbjct: 233 KDKKNPLLIGNCANE---ALKTFTDSINSGKLGFLQMDISGLSLISIEKEISEILADGSK 289
Query: 277 NRVEVEQRVEEIKNLV-RSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIG 335
N E+ +V+++ V +S GIVLNLG+L+ A++ ++E ++ ++
Sbjct: 290 NEEEIRMKVDDLGRTVEQSGSKSGIVLNLGELKVLTSEANA---------ALEILVSKLS 340
Query: 336 KLVCGIGENARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSD 394
L+ E+ + +G +++ ++Y + P++E W LH L IT +
Sbjct: 341 DLLK--HESKQLSFIGCVSSNETYTKLIDRFPTIEKDWDLHVLP----------ITASTK 388
Query: 395 LQSQSTSKKAESGVSWLLFEG-------------EEENKQLTCCADCSAKFEAEARSL-- 439
+Q K+ S++ F G N+ L+ C C+ K+ E ++
Sbjct: 389 PSTQGVYPKSSLMGSFVPFGGFFSSTSNFRVPLSSTVNQTLSRCHLCNEKYLQEVAAVLK 448
Query: 440 -QSSSCNSDSPTSSLPAWLQ--QYKNEKKATLSN------NDKDSGVRDLCKKWNSICNS 490
SS +D + L WL+ + K +K T S+ N S L KKW++IC S
Sbjct: 449 AGSSLSLADKCSEKLAPWLRAIETKEDKGITGSSKALDDANTSASQTAALQKKWDNICQS 508
Query: 491 IHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWR-EHHFLFS 549
IH P + + L F S SP Q+P V+ ++S R +L +
Sbjct: 509 IHHTPAFPK--LGFQSVSP-----------QFP-----------VQTEKSVRTPTSYLET 544
Query: 550 HEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI-MEMEYVHKFKE----- 603
+ + S+P +DL +++ S P S ++D + + Y K +E
Sbjct: 545 PKLLNPPISKPK------PMEDLTASVTNRTVSLPLSCVTTDFGLGVIYASKNQESKTTR 598
Query: 604 -------LNS-------ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFK 649
LNS ++ SL L +KV WQ + V I+ + C++ + RR
Sbjct: 599 EKPMLVTLNSSLEHTYQKDFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQ--- 655
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
WL G D K+K+A L+ + FG N++ + F + + R
Sbjct: 656 -----ASGIWLALLGPDKVGKKKVAMTLSEVFFGGKVNYICV---DFGAEHCSLDDKFRG 707
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
K + ++ +S PH V L+E+VE+A++ Q A+ +G+I G +
Sbjct: 708 K--------TVVDYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVI 759
Query: 770 SLGDAIVILS 779
S+ + IV+++
Sbjct: 760 SMKNVIVVVT 769
>gi|297721297|ref|NP_001173011.1| Os02g0537800 [Oryza sativa Japonica Group]
gi|255670974|dbj|BAH91740.1| Os02g0537800 [Oryza sativa Japonica Group]
Length = 686
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 268/576 (46%), Gaps = 118/576 (20%)
Query: 329 HIIMEIGKLVCGIGENAR-FWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLS 387
H + E+ L CG G WL+G T+Q+ +RC++GHPSLETLW LH L +PAGSL+LS
Sbjct: 114 HAVAEVRALACGGGGGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGLHTLAVPAGSLALS 173
Query: 388 LITTDS-----------------DLQSQSTSKKAESGVSWL-LFEGEE-----ENKQLT- 423
L D+ + QS + + S L L + + QL
Sbjct: 174 LTCADADAAADDDDSGAMAAAAVNHQSAKGANGSTSPSPCLSLLDAAAAGGACSSGQLAV 233
Query: 424 ---------CCADCSAKFEAE-ARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
C DC+A +A +S+ ++ + T+++P WL ++++ A
Sbjct: 234 MAAAVSGAYCGGDCAAATKALLPQSVVFMPPSATTTTTTIPPWLHHCRDQEPAAHM---- 289
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWA 533
KKW S H L SS + S +S SY +QY H+ ++ W
Sbjct: 290 --------KKWMSA----HGGSPSRRTALNISSTAVSPCSSVSSY-EQYTRLHQPYQPWL 336
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRN---STPNSTSSS 590
V A D +E + YI + + + + +S++S+
Sbjct: 337 V-----------------ADDDDEAEETKHPYIAGDGGAGRLVPAAAKVVIKSDDSSASN 379
Query: 591 DIMEMEYVH-KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG----TMRRK 645
+E+E+ +FKE+++ENL LC ALEK+VPWQK V +IA+TVL+CRSG M R+
Sbjct: 380 GSVEVEWRRPRFKEVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARR 439
Query: 646 GKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIA------------L 693
S KE TW+ F G DAD K ++A+ELA LVFGS +FVSI
Sbjct: 440 SSSC--SSSKEHTWMLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSS 497
Query: 694 SSFSSTRADSTEDSRNKR-----------SRDEQSCSYIERFAEAVSNNPHRVFLIEDVE 742
SS + + + + R+KR RD+ ++E +AV +NP RV L+E V+
Sbjct: 498 SSPARSSGSTEQPHRSKRPWAETTTTTTSGRDQD---HLEALYDAVRDNPRRVILMERVD 554
Query: 743 QADYCSQKGFKRAIE--SGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKS-- 798
+AD G + AIE R G+E LGDAIV+LSCES + S +P K K+
Sbjct: 555 RADARCHDGIRDAIERGVVRSRGGGGEEAFLGDAIVVLSCESLNPSST--TPAKKAKTEY 612
Query: 799 -------DGCEEEKGAAMEGTSPSVSLDLNICIDDD 827
DG + A+ + DLN+ +DDD
Sbjct: 613 SVEKLDQDGDDHHGKEAVAAAASPSCFDLNMSMDDD 648
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 94/115 (81%), Gaps = 11/115 (9%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-----AASTGLLRTA 55
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ ML A + GLLR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CLQSHSHPLQCKALELCFNVALNRLPAST-STPMLG-GHC----QFPTISNALVA 104
CL+SHSHPLQCKALELCFNVALNRLPAS ++P+LG GH P++SNAL A
Sbjct: 61 CLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNALHA 115
>gi|226533379|ref|NP_001141435.1| uncharacterized protein LOC100273545 [Zea mays]
gi|194704568|gb|ACF86368.1| unknown [Zea mays]
Length = 474
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 242/460 (52%), Gaps = 73/460 (15%)
Query: 424 CCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKK 483
C ADCSA + C++ + SS+P WLQ ++ ++ + CKK
Sbjct: 48 CAADCSA-----------TKCDA-TVKSSIPPWLQHCRDHQEPSR------------CKK 83
Query: 484 WNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
+S C P + RT S S S+S SY+Q Y H++++ W +V E
Sbjct: 84 -SSTCGG---SPSHHHRTALNFSTVVSPSSSVSSYEQHYHLRHQSYQPWLLVADGAREAE 139
Query: 544 HHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKE 603
H +K+ +++L++ + +D K PLS+ + + +S++S+ +E +FKE
Sbjct: 140 H-------PCNKARCSAAVQLHVVDDEDGK-PLSAIKVKSHDSSASNGSVECRS--RFKE 189
Query: 604 LNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE-------VKE 656
L++ENL LC+ALEK+VPWQ + V +IA+TVL+CRSG RR+ S KE
Sbjct: 190 LSAENLKVLCSALEKEVPWQAEIVPEIASTVLQCRSGMARRREAAVSSSRPSSTQACAKE 249
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR----ADSTEDSRNKRS 712
+TW+ F G DA+ K ++A+ELARLVFGS +FVSI S +++ +D + + + KR
Sbjct: 250 DTWMLFHGGDAEGKARVARELARLVFGSRKSFVSIGGSRTTASSPACWSDGSSEQQRKRP 309
Query: 713 R----DEQSCSYIERFAEAVSNNPHRVFLIEDVEQAD-YCSQKGFKRAIESGRIVTSSG- 766
R C + E EAV +NPHRV L++DVEQ + Q+ AI+SG + + +G
Sbjct: 310 RLTEASNHGCRH-ESLYEAVRDNPHRVILVQDVEQGGCWRCQRDILEAIQSGLVRSRAGD 368
Query: 767 DEVSLGDAIVILSCESFSSRSRACSPPTKQKS-------------DGCEEEKGA---AME 810
D+ +LGDAIV+LSC+S + S SP T +K+ G K A A
Sbjct: 369 DDAALGDAIVVLSCQSLDAWSTTTSPLTTKKAKAESKEEPEEEESAGDHRRKEAITAAAA 428
Query: 811 GTSPSVSLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFK 850
S S+ DLN+ +++ TE D LL++VD+ F+
Sbjct: 429 SPSSSLCFDLNMDVENHDTE-SCFTDASLLKAVDRTFFFR 467
>gi|255585368|ref|XP_002533380.1| conserved hypothetical protein [Ricinus communis]
gi|223526773|gb|EEF28998.1| conserved hypothetical protein [Ricinus communis]
Length = 1112
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 260/527 (49%), Gaps = 62/527 (11%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSH 62
T +Q LT EAA + +A+++ARRRGH+Q T LH + +L+ + +LR AC++ +++
Sbjct: 7 TARQCLTPEAAHALDEAVSVARRRGHSQTTSLHAVSALLSIPSSILRDACVRARNSAYTP 66
Query: 63 PLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS----I 118
LQ KALELC +V+L+R+PAS + Q P +SN+L+AA KR+QA+QRR +
Sbjct: 67 RLQFKALELCLSVSLDRVPASQLSE------QDPPVSNSLMAAIKRSQANQRRQPENFHL 120
Query: 119 ENQQQ----PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV----EQAVSLE 170
QQQ + +K+EL+ LI+SILDDP VSRV E+GF S+++K + Q + L
Sbjct: 121 YQQQQCSTTSVSCIKVELQNLILSILDDPVVSRVFGESGFRSSEIKLAIVRPLPQVLRLS 180
Query: 171 ICSQSTPVS-SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRN 229
+ P+ N S S+ S P S +E+ + E L+ + RN
Sbjct: 181 QRFRGPPMFLCNLSDHSD-----PGPGRRGFSFPFFSGFTDGDENCRRIGEVLVRNKGRN 235
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK--CLPLSISSF--RHMNRVEVEQRV 285
++VG C +++K + +P L ++ C+ + F + ++ V+ R
Sbjct: 236 PLLVGVCAYDTLASFNQLVEKRKDYVLPVELSGLRVICIESDVMKFASENFDKGCVDLRF 295
Query: 286 EEIKNLVRSCLGRGIVLNLGDLE-WAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGEN 344
EE+ V LG G+V+NLGDL+ + S G + +I+ ++ +++ G
Sbjct: 296 EEVGRFVEQNLGPGLVVNLGDLKAFISSENDYSNSSNGLNDLMSYIVEKLTRMLQLYGR- 354
Query: 345 ARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKK 403
+ WL+G A+++ Y++ S PS+E W L L I + S+ +S S
Sbjct: 355 -KVWLIGTTASYEGYLKFVSRFPSVEKDWDLQLLPITSFRTSMP--------ESCPRSSL 405
Query: 404 AESGVSWLLF--EGEEENKQLTC-------CADCSAKFEAEARSLQSSSC---NSDSPTS 451
ES + + F E N L+ C C+ K E E ++ C +D S
Sbjct: 406 MESFIPFGGFFSTPSELNGSLSSSYQCISRCHLCNEKCEQEVLAVSKGGCVASVADQYQS 465
Query: 452 SLPAWLQQYKNEKKATLSNNDKDSG------VRDLCKKWNSICNSIH 492
+LP+WLQ + L +D G V L KKW+SIC +H
Sbjct: 466 NLPSWLQMAELGTNKGLDVKTRDDGDVLSAKVAGLQKKWDSICWRLH 512
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 557 TSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTS-----SSDIMEMEYVHKFKELNSENLTS 611
T +P + Y+ +DL S N + S S SS ++ +F + +
Sbjct: 648 TKKPENKHYVELSRDLSGSFSPNNDVINGSISDHLAHSSSFSSLDIGRQF---DPTSFKM 704
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L AL +KV Q + V+ I+ T+ R+ R +G S +K + W F G D +K
Sbjct: 705 LVRALTEKVSCQDEAVHLISQTIAHYRTRNERHQG-----SSLKRDIWFNFLGPDRCSKR 759
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTED--SRNKRSRDEQSCSYIERFAEAVS 729
KIA LA ++FGS N +S LS +E+ + + R + Y+ A +
Sbjct: 760 KIAAALAEIIFGSSENLISADLSPQDGIVNMHSEEVHAYDVMFRGKTIIDYV---AGELG 816
Query: 730 NNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
P V +E+V++AD +Q RAI +G+ S G EV + +AI +
Sbjct: 817 KKPLAVVFLENVDKADVQAQNSLSRAIRTGKFSDSHGREVGINNAIFV 864
>gi|413936868|gb|AFW71419.1| hypothetical protein ZEAMMB73_805690 [Zea mays]
Length = 831
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 135/229 (58%), Gaps = 64/229 (27%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAST----------- 49
MRAG T+ Q LTAEAA+ ++ ++ LARRRGHAQVTPLHVA T+L S
Sbjct: 1 MRAGAYTVHQSLTAEAAAALQLSLGLARRRGHAQVTPLHVAYTLLGGSEPPPSSSSPRLF 60
Query: 50 ----------GLLRTACLQS--HSHPLQ-CKALELCFNVALNRLPAST-------STP-- 87
GLL AC +S +HP Q C+ALELCFNVALNRLP T S+P
Sbjct: 61 TTIAASAPAYGLLVRACARSRRQTHPAQQCRALELCFNVALNRLPTGTANAGGLGSSPSP 120
Query: 88 -------MLGGHCQFPTISNALVAAFKRAQAHQRRGSIE--------------------- 119
+L PT+SNALVAA KRAQA+QRRG +E
Sbjct: 121 ATSFAASLLQQQPASPTLSNALVAALKRAQANQRRGCVELQSQPSPPPPPPGQQPHSTTS 180
Query: 120 ---NQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQ 165
QQQP+L +K+EL+QLI+SILDDPSVSRVMREAGFSS VK+++E+
Sbjct: 181 PSHQQQQPVLTIKVELDQLIVSILDDPSVSRVMREAGFSSAAVKASLEE 229
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 213 EDVMYVIENLMSKRKR----NFVVVGECLASIEGVVRGVIDKIEKG-DVPEALRDVKCLP 267
EDV ++E + +R R N VVV + + E V ++ ++E+G DVP+ LR + L
Sbjct: 327 EDVRAIVEVMTRRRGRLRRANPVVVADSAPAAEACVAELVRRVERGGDVPDELRGARVLR 386
Query: 268 LSISS--FRHMNRVEVEQRVEEIKNLV----RSCLGRGIVLNLGDLEWA-EFRASSSEQV 320
L +S R M R + + ++ V + G G+V+ +GD+ WA + +
Sbjct: 387 LHLSRARVRLMTRADADAWAAGLRRSVAGSNSTGAGGGLVIYVGDMRWAVDDGTDDDDHA 446
Query: 321 RGY----------YCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLET 370
RG + + + +R WL+ A++ ++MRC+ SL+
Sbjct: 447 RGLQGPSSSGSYSPAAHLAAELARLLADLRLRAASRAWLLAAASYATFMRCQRS--SLDV 504
Query: 371 LWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEG----EEENKQLTCCA 426
W L P+++PAG+ + + ++ + A+ + E+ T CA
Sbjct: 505 TWGLQPVSVPAGAGGGGGLGLELGPRAATARPAAQRPAQLPPLDRAPREEDGVPTPTLCA 564
Query: 427 DCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCK---K 483
+C+ +E EA +++ + +D + P W + +E + + KD DL K K
Sbjct: 565 ECAEHYEREASDVRAKAAGTDLALTFFPGW--PHADEPQ----TSHKD----DLMKLKWK 614
Query: 484 WNSICN 489
W+ +C
Sbjct: 615 WSRLCQ 620
>gi|168010434|ref|XP_001757909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690786|gb|EDQ77151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1030
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 141/231 (61%), Gaps = 26/231 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR+G +Q L+ A V++QA++ AR RGHAQV PLHVA +LA +LR AC +H
Sbjct: 1 MRSGAAAVQNTLSLPAQQVLRQAISAARERGHAQVQPLHVAFVLLAHGDPVLRQACADTH 60
Query: 61 SHPL----QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
S L QC ALELCFNVAL+RL +S+ G +SNALVAA KRAQA Q+RG
Sbjct: 61 SQTLHGLHQCHALELCFNVALDRLQQCSSS---GSTVNLLGLSNALVAALKRAQAQQKRG 117
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
+ QQ PL+ +K+ELE +IISIL+DPSVSRVM EAGF S QVK+N+E A+SL SQ
Sbjct: 118 CPDQQQAPLV-MKVELEMVIISILEDPSVSRVMEEAGFFSQQVKTNIENAMSLSALSQ-- 174
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRK 227
+SNV LSQ SA S P N+ ++ + L R+
Sbjct: 175 --------QSNVNHLSQRLSA--------SAGPFGNQPLVILERPLFPTRE 209
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 595 MEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEV 654
++YVHK L +KV WQ + I+ ++ ++G +G
Sbjct: 600 LKYVHK--------------GLMEKVVWQGKAISTISTFIVNAQTGRGELRG-----GAA 640
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS-TRADSTEDSRNKRSR 713
K TWL G D K IA LA LV G + +S R D R R
Sbjct: 641 KAGTWLLLLGPDQVGKRLIAGALAELVVGVAAKPIYFGDLGYSRWGRKVEEIDGMQYRGR 700
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
+ ++ A+A+ P V L+ED++QA + RA+ +G+ S+G VS+G+
Sbjct: 701 -----TAVDSIADALRAKPLSVLLLEDIDQAVSVIRTKLMRAMVTGKFSDSNGGHVSVGN 755
Query: 774 AIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSL------------DLN 821
+I+I+ +SR A S K K + E + A+M G S+ L D++
Sbjct: 756 SIIIM-----TSRLGANSNLGKGKENIFSEGRLASMHGARMSLLLQPPREKEIVLQGDMD 810
Query: 822 ICIDDDSTEDQSIDD 836
I + D+ ++++
Sbjct: 811 ISVVRDTIRTSALEN 825
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 28/116 (24%)
Query: 415 GEEENKQLTCCADCSAKFEAEARSL------------QSSSCNSDSPTSSLPAWLQQYKN 462
G E +L CC++C+ F E + + SS + SSLP+WLQ+ K+
Sbjct: 248 GSTEVPKLICCSECTDHFNMEYNQIRVQESAKASTVRKQSSTEDEVVVSSLPSWLQKGKD 307
Query: 463 EK--KATLSNNDKD---------SGVRDLCKKWNSICNSIHKQPYYSERTLTFSSA 507
K + +L+++D D +++L +KW +C++ H SER +T S+
Sbjct: 308 MKTEQISLTSSDFDVQERHHSLSQRIQELRRKWQFVCSNSH-----SERCITMDSS 358
>gi|218190920|gb|EEC73347.1| hypothetical protein OsI_07555 [Oryza sativa Indica Group]
Length = 683
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 266/575 (46%), Gaps = 119/575 (20%)
Query: 329 HIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSL 388
H + E+ L CG G +G T+Q+ +RC++GHPSLETLW LH L +PAGSL+LSL
Sbjct: 114 HAVAEVRALACGGGGGVWL--VGHGTYQTNIRCRTGHPSLETLWGLHTLAVPAGSLALSL 171
Query: 389 ITTDS-----------------DLQSQSTSKKAESGVSWL-LFEGEE-----ENKQL--- 422
D+ + QS + + S L L + + QL
Sbjct: 172 TCADADAAADDDDSGAMAAAAVNHQSAKGANGSTSPSPCLSLLDAAAAGGACSSGQLAVM 231
Query: 423 ------TCC-ADCSAKFEA-EARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKD 474
CC DC+A +A +S+ ++ + T+++P W ++++ A
Sbjct: 232 AAAVSGACCGGDCAAATKALLPQSVVFMPPSATTTTTTIPPWPHHCRDQEPAAHM----- 286
Query: 475 SGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAV 534
KKW S H L SS + S +S SY +QY H+ ++ W V
Sbjct: 287 -------KKW----MSAHSGSPSRRTALNISSTAVSPCSSVSSY-EQYTRLHQPYQPWLV 334
Query: 535 VEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRN---STPNSTSSSD 591
A D +E + YI + + + + +S++S+
Sbjct: 335 -----------------ADDDDEAEETKHPYIAGDGGAGRLVPAAAKVVIKSDDSSASNS 377
Query: 592 IMEMEYVH-KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG----TMRRKG 646
+E+E+ +FKE+++ENL LC ALEK+VPWQK V +IA+TVL+CRSG M R+
Sbjct: 378 SVEVEWRRPRFKEVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARRS 437
Query: 647 KFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIA------------LS 694
S KE TW+ F G DAD K ++A+ELA LVFGS +FVSI S
Sbjct: 438 SSC--SSSKEHTWMLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSSS 495
Query: 695 SFSSTRADSTEDSRNKR-----------SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQ 743
S + + + + R+KR RD+ ++E +AV +NP RV L+E V++
Sbjct: 496 SPARSSGFTEQPHRSKRPWAETTTTTTSGRDQD---HLEALYDAVRDNPRRVILMERVDR 552
Query: 744 ADYCSQKGFKRAIE--SGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKS--- 798
AD G + AIE R G+E LGDAIV+LSCES + S +P K K+
Sbjct: 553 ADARCHDGIRDAIERGVVRSRGGGGEEAFLGDAIVVLSCESLNPSST--TPAKKAKTEYS 610
Query: 799 ------DGCEEEKGAAMEGTSPSVSLDLNICIDDD 827
DG + A+ + DLN+ +DDD
Sbjct: 611 VEKLDQDGDDHHGKEAVAAAASPSCFDLNMSMDDD 645
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 94/115 (81%), Gaps = 11/115 (9%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-----AASTGLLRTA 55
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ ML A + GLLR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CLQSHSHPLQCKALELCFNVALNRLPAST-STPMLG-GHC----QFPTISNALVA 104
CL+SHSHPLQCKALELCFNVALNRLPAS ++P+LG GH P++SNAL A
Sbjct: 61 CLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNALHA 115
>gi|413939265|gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]
Length = 953
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 239/501 (47%), Gaps = 86/501 (17%)
Query: 32 HAQVTPLHVANTMLAASTGLLRTACLQ--SHSHPLQCKALELCFNVALNRLPASTSTPML 89
HA TPLH A +L+ LLR AC+ + HPL+C+AL+LCF+VAL+RLP ST
Sbjct: 41 HAHTTPLHAAAALLSGPAPLLRDACVAGLASPHPLRCRALDLCFSVALDRLPTSTELQHH 100
Query: 90 GGHC-----QFPTISNALVAAFKRAQAHQRR---GSIENQQQPLLAVKIELEQLIISILD 141
G P +SNAL AA KRA AH RR G +E ++ + L+++ILD
Sbjct: 101 EGGAFHHASAAPPLSNALAAALKRAYAHHRRIGSGGVETDDH-----RVGVPHLVLAILD 155
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVS 201
DPSV+RVMREA FSST VK+ + +++S + S + V+ + AS
Sbjct: 156 DPSVARVMREASFSSTAVKAAMLRSLSDPAAPDAAAYVSAR-------VMHRQASH---- 204
Query: 202 KPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
R E+V V+E L +KRN V+VG+ + ++ VV+ V+ I++ + A
Sbjct: 205 ---------REEEVAKVVEVLKRAKKRNPVLVGDTV-DVDAVVQEVVTLIQRQRLGNA-- 252
Query: 262 DVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSC-LGRGIVLNLGDLEW------AEFRA 314
V P M+R + +V+E+ VRS G+V+NLG+L+W A R
Sbjct: 253 RVISFPKEFGDLVDMDRARLTAKVKELGEAVRSASASAGVVVNLGNLQWLVEERCAAPRG 312
Query: 315 SSSEQVRGYYC--SIEHIIMEIGKL--VCGIGENARFWLMGIATFQSYMRCKSGHPSLET 370
++ R + + E+ ++ + G GE+ R W++G AT +Y++C+ HP+LE+
Sbjct: 313 EQQQEKRRDVVLDTARAAVAEMARVLNLSGEGEH-RVWVIGTATCATYLKCQVYHPALES 371
Query: 371 LWSLHPLTI---------------PAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEG 415
W L + I P+ ++ ++++ ++ S + + + S
Sbjct: 372 EWDLQAVPITPRPPPPPPPPLGLSPSAGVNRGILSSSVEVLSTAMTSPMQRAPS------ 425
Query: 416 EEENKQLTCCADCSAKFE---AEARSLQSSSCNSDSPTSSLPAWLQ-QYKNEKKATLSNN 471
C+ C+ +E AE S + + C ++ P S WLQ + +
Sbjct: 426 --------LCSACAEGYERERAEMASSERAPCPAEQPMSQ---WLQIGTPSSGRPADRAQ 474
Query: 472 DKDSGVRDLCKKWNSICNSIH 492
+K +L ++W C +H
Sbjct: 475 EKAREADELRRRWRDRCAQLH 495
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L L + V WQ + +A+T+ K RS + + + W+ F G D K
Sbjct: 558 LVRRLTEAVRWQPEAAAAVASTIAKARSSE-----SRRRRTTAGVDAWIVFAGPDVAGKR 612
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
+A+ L++ VFG+ + + +S R + + ++R AEA+ N
Sbjct: 613 SMAEALSKSVFGTGAVTLRLGWPQAGDDGGESVVSCRGQ--------TALDRMAEAIRAN 664
Query: 732 PHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVIL 778
P RV +++ V+ AD RA+ESGR+ S G +V+LG+ I ++
Sbjct: 665 PFRVVVLDGVDHADSVVHASILRAVESGRLSDSHGRDVALGNNIFVV 711
>gi|242066778|ref|XP_002454678.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
gi|241934509|gb|EES07654.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
Length = 955
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 231/490 (47%), Gaps = 62/490 (12%)
Query: 32 HAQVTPLHVANTMLAASTGLLRTACLQ--SHSHPLQCKALELCFNVALNRLPASTSTPML 89
HA TPLH A +L+ LLR AC + HPL+C+AL+LCF+VAL+RLP TST +
Sbjct: 40 HAHTTPLHAAAALLSGPAPLLRDACAAGLASPHPLRCRALDLCFSVALDRLP--TSTELQ 97
Query: 90 GGH------CQFPTISNALVAAFKRAQAHQRR---GSIENQQQPLLAVKIELEQLIISIL 140
H P +SNAL AA KRA AH RR G +E ++ + L+++IL
Sbjct: 98 HHHDGAFHAAAAPPLSNALAAALKRAYAHHRRIGSGGVEADDH-----RVGVPHLVLAIL 152
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKV 200
DDPSV+RVMREA FSST VK+ + + S S P + + + V+ + AS
Sbjct: 153 DDPSVARVMREASFSSTAVKAAM-------LRSLSDPAAPDAGAFVSARVMHRQASHG-- 203
Query: 201 SKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEAL 260
R E+V V+E L +KRN V+VG+ + ++ VV+ VI I++ + A
Sbjct: 204 ----------REEEVAKVVEVLKRGKKRNPVLVGDTV-DVDAVVQEVITLIQRQRLGNA- 251
Query: 261 RDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGR-GIVLNLGDLEW------AEFR 313
V P M+R ++ +++E+ VRS G+V+NLG+L+W A +
Sbjct: 252 -RVISFPKEFGDPVDMDRAQLTAKIKELGETVRSASSSAGVVVNLGNLQWLVEEKCASHQ 310
Query: 314 ASSSEQVRGYYC-SIEHIIMEIGKL--VCGIGENARFWLMGIATFQSYMRCKSGHPSLET 370
E+ R + + E+ ++ + G GE+ R W++G AT +YM+C+ HP LE+
Sbjct: 311 GEQQEKRRDVVLDTARAAVDEMARVLNLSGEGEH-RVWVIGTATCATYMKCQVYHPGLES 369
Query: 371 LWSLH--PLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADC 428
W L P+T + + + + V + + C+ C
Sbjct: 370 EWDLQAVPITPRPPPPPPPPLGLSPSVGANRGILSSSVEVLSTAMTSSPMQRAPSLCSAC 429
Query: 429 SAKFE---AEARSLQSSSCNSDSPTSSLPAWLQ---QYKNEKKATLSNNDKDSGVRDLCK 482
+E AE S + + C ++ P S WLQ +K V +L +
Sbjct: 430 IEGYERERAEMASSERAPCPAEQPMS---LWLQIGTPSSGRPAPADRAQEKAREVDELRR 486
Query: 483 KWNSICNSIH 492
+W C +H
Sbjct: 487 RWRDRCAQLH 496
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L L + V WQ + +A T+ K RSG RR+GK + W+ F G D K
Sbjct: 557 LVRRLTEAVRWQPEAAAAVACTIAKARSGVARRRGK------ADVDAWVVFAGPDVAGKR 610
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
+A+ L++ VFG+ V ++ +S R + + ++R AEA+ N
Sbjct: 611 SMAEALSKSVFGTGAVTVRLSWPQAGDDGGESVVSCRGQ--------TALDRMAEAIRAN 662
Query: 732 PHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVIL 778
P RV +++ V+ AD + RAIESGR+ S G +V+LG I ++
Sbjct: 663 PFRVVVLDGVDHADSVVRGSILRAIESGRLSDSHGRDVALGTNIFVV 709
>gi|115449139|ref|NP_001048349.1| Os02g0788600 [Oryza sativa Japonica Group]
gi|47497764|dbj|BAD19864.1| 101 kDa heat shock protein-like [Oryza sativa Japonica Group]
gi|113537880|dbj|BAF10263.1| Os02g0788600 [Oryza sativa Japonica Group]
Length = 965
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 191/365 (52%), Gaps = 48/365 (13%)
Query: 32 HAQVTPLHVANTMLAASTGLLRTACLQ--SHSHPLQCKALELCFNVALNRLPASTSTPML 89
HA TPLH A +L+ LLR AC+ + HPL+C+AL+LCF VAL+RLP ST
Sbjct: 43 HAHTTPLHAAAALLSGPAPLLRDACVAGLASPHPLRCRALDLCFAVALDRLPTSTEHQH- 101
Query: 90 GGHCQFPTISNALVAAFKRAQAHQRR---GSIENQQQPLLAVKIELEQLIISILDDPSVS 146
H P +SNAL AA KRA AH RR G +E ++ + L+++ILDDPSV+
Sbjct: 102 --HHAAPPLSNALAAALKRAYAHHRRIGSGVVEADDH-----RVGVPHLVLAILDDPSVA 154
Query: 147 RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS 206
RVMREA FSST VK+ + + S S P + + N VL + S
Sbjct: 155 RVMREASFSSTAVKAAM-------LRSLSDPAAPDSGVYVNARVLHRQVSH--------- 198
Query: 207 LDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
R E+V V+E L +KRN V+VG+ + ++ VV+ V+ I++ + A V
Sbjct: 199 ----REEEVNKVVEVLKRGKKRNPVLVGDTV-DVDAVVQEVVTMIQRQRLGNAR--VISF 251
Query: 267 PLSISSFRHMNRVEVEQRVEEIKNLVRSCL------GRGIVLNLGDLEW--AEFRASSSE 318
++R E+ +++E+ +RS L G+V+NLG+L+W E + E
Sbjct: 252 QREFGDLVDLDRAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQWLVEERCVAPGE 311
Query: 319 QVRGYYCSIE---HIIMEIGKLVCGIGENA-RFWLMGIATFQSYMRCKSGHPSLETLWSL 374
Q + ++ + E+ +++ GE R W++G AT +Y++C+ HPSLE+ W L
Sbjct: 312 QEKRRDVVLDTARAAVAEMARILRQSGEREHRVWVIGTATCATYLKCQVYHPSLESEWDL 371
Query: 375 HPLTI 379
+ I
Sbjct: 372 QAVPI 376
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 51/257 (19%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L L + V WQ + +A + K RSG +R+G + +TW+ F G D K
Sbjct: 574 LVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGM----GPTRADTWVLFSGHDVAGKT 629
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
K+A+ L+ VFG+ N V++ L+ + E + R R C A+A+ N
Sbjct: 630 KMAEALSMSVFGT--NAVALRLA------GNGGEPIASCRGRTALDC-----VADAIRAN 676
Query: 732 PHRVFLIE--DVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI-VILSCESFSSRSR 788
P RV +++ D D Q RA+ESGR+V S G +V+LG+AI V++S + +R
Sbjct: 677 PLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVVMSLDD----TR 732
Query: 789 AC--------SP---------------PTKQKSDGCEEEKGAAMEGTSPSVSLDLNICID 825
C SP P Q DG + + + SP + LDLN+ +
Sbjct: 733 RCQEDHQFTDSPWNLELRVRNNARKRRPEPQPLDGAGDRRLKPRK-DSPPLHLDLNLSMC 791
Query: 826 DDSTEDQSIDDIGLLES 842
+D T+D DD G ES
Sbjct: 792 EDHTDD---DDSGGEES 805
>gi|218191719|gb|EEC74146.1| hypothetical protein OsI_09225 [Oryza sativa Indica Group]
Length = 643
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 191/365 (52%), Gaps = 48/365 (13%)
Query: 32 HAQVTPLHVANTMLAASTGLLRTACLQ--SHSHPLQCKALELCFNVALNRLPASTSTPML 89
HA TPLH A +L+ LLR AC+ + HPL+C+AL+LCF VAL+RLP ST
Sbjct: 44 HAHTTPLHAAAALLSGPAPLLRDACVAGLASPHPLRCRALDLCFAVALDRLPTSTEHQH- 102
Query: 90 GGHCQFPTISNALVAAFKRAQAHQRR---GSIENQQQPLLAVKIELEQLIISILDDPSVS 146
H P +SNAL AA KRA AH RR G +E ++ + L+++ILDDPSV+
Sbjct: 103 --HHAAPPLSNALAAALKRAYAHHRRIGSGVVEADDH-----RVGVPHLVLAILDDPSVA 155
Query: 147 RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS 206
RVMREA FSST VK+ + + S S P + + N VL + S
Sbjct: 156 RVMREASFSSTAVKAAM-------LRSLSDPAAPDSGVYVNARVLHRQVSH--------- 199
Query: 207 LDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
R E+V V+E L +KRN V+VG+ + ++ VV+ V+ I++ + A V
Sbjct: 200 ----REEEVNKVVEVLKRGKKRNPVLVGDTV-DVDAVVQEVVTMIQRQRLGNA--RVISF 252
Query: 267 PLSISSFRHMNRVEVEQRVEEIKNLVRSCL------GRGIVLNLGDLEW--AEFRASSSE 318
++R E+ +++E+ +RS L G+V+NLG+L+W E + E
Sbjct: 253 QREFGDLVDLDRAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQWLVEERCVAPGE 312
Query: 319 QVRGYYCSIE---HIIMEIGKLVCGIGENA-RFWLMGIATFQSYMRCKSGHPSLETLWSL 374
Q + ++ + E+ +++ GE R W++G AT +Y++C+ HPSLE+ W L
Sbjct: 313 QEKRRDVVLDTARAAVAEMARILRQSGEREHRVWVIGTATCATYLKCQVYHPSLESEWDL 372
Query: 375 HPLTI 379
+ I
Sbjct: 373 QAVPI 377
>gi|295829853|gb|ADG38595.1| AT3G52490-like protein [Neslia paniculata]
Length = 158
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 23/178 (12%)
Query: 166 AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
AVSLEICS++T SS+K KE +L P+RNEDVM VI +L+ K
Sbjct: 1 AVSLEICSKTT--SSSKPKEGKLLT------------------PVRNEDVMNVINSLVDK 40
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
++RNFV+VGECLA+++GVVR V++K++K DVPEAL+DVK + LS SSF +R +VE ++
Sbjct: 41 KRRNFVIVGECLATVDGVVRSVMEKVDKKDVPEALKDVKFITLSFSSFGQPSRADVEHKL 100
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEW---AEFRASSSEQVRGYYCSIEHIIMEIGKLVCG 340
EE++ LVRSC+G+G++LNLGDL W + R SS YC +EH+IMEIGKL G
Sbjct: 101 EELETLVRSCVGKGVILNLGDLNWFVESRTRGSSVYNNNNNYCVVEHMIMEIGKLARG 158
>gi|297736601|emb|CBI25472.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 245/550 (44%), Gaps = 111/550 (20%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LT EAA + +A+ +ARRRGHAQ T LH + ML+ + LLR AC + ++S L
Sbjct: 9 RQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARARNSAYSARL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN---- 120
Q KALELC +V+L+R+P++ P +SN+L+AA KR+QA+QRR EN
Sbjct: 69 QFKALELCLSVSLDRVPSTQLA-------DDPPVSNSLMAAIKRSQANQRR-QPENFQLY 120
Query: 121 ------QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEIC 172
+ +K+EL+ LI+SILDDP VSRV EAGF S +K + + + L
Sbjct: 121 QQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLPQLLRYS 180
Query: 173 SQSTP-------VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
P + S+ S+ S S + +E+ + E L
Sbjct: 181 RSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTG--------------DENCKRIGEVLGRG 226
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
+ RN ++VG C ++ + +EKG LP+ IS F
Sbjct: 227 KGRNPLLVGVCAYD---ALQSFTEMVEKG-------RYNILPVEISGF------------ 264
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENA 345
EE+ LV+ CLG G+V+N GDL+ R +S V Y S ++EI
Sbjct: 265 EEVGVLVQHCLGAGLVVNFGDLKVFIDRDDASVGVVSYVVSQLTRLLEI--------HGG 316
Query: 346 RFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI-----PAG------SLSLSLITTDS 393
+ LMG ++++++Y++ + +PS+E W L L I P G SL S +
Sbjct: 317 KVRLMGAVSSYETYLKFLNRYPSIEKDWDLQLLPITSLRPPMGEPYARSSLMESFVPLGG 376
Query: 394 DLQSQSTSKKAESGVSWLLFEGEEENKQLTC-CADCSAKFEAEARSLQSSSCN---SDSP 449
S K SG + Q T C C+ K E E +L +D
Sbjct: 377 FFSSPCELKGQLSG-----------SYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQY 425
Query: 450 TSSLPAWLQQYKNEKKATLS-NNDKDSG-------VRDLCKKWNSICNSI-HKQPYYSER 500
+LPAWLQ + K KD G + L KKW++IC + H QP+
Sbjct: 426 QPNLPAWLQMAELGKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKAD 485
Query: 501 TLTFSSASPS 510
S PS
Sbjct: 486 FYRVGSQVPS 495
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 557 TSEPSLRLYIPEHKDLKQ--------PLSSNRNSTP------NSTSSSDIMEMEYVHKFK 602
T++ L L+ P K LK+ PL + P N + S+ +
Sbjct: 601 TTDLGLGLFYPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWG 660
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
+ + + +L AL +++ WQ + + I+ T+ CR G +R G + K + W F
Sbjct: 661 QSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHG-----ASPKGDIWFNF 715
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSS 695
G D +K+KIA LA +++G +F+ + LSS
Sbjct: 716 VGPDRFSKKKIAVALAEILYGRRESFICVDLSS 748
>gi|225448447|ref|XP_002272110.1| PREDICTED: uncharacterized protein LOC100260392 [Vitis vinifera]
Length = 1105
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 250/557 (44%), Gaps = 99/557 (17%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LT EAA + +A+ +ARRRGHAQ T LH + ML+ + LLR AC + ++S L
Sbjct: 9 RQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARARNSAYSARL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN---- 120
Q KALELC +V+L+R+P++ P +SN+L+AA KR+QA+QRR EN
Sbjct: 69 QFKALELCLSVSLDRVPSTQLA-------DDPPVSNSLMAAIKRSQANQRR-QPENFQLY 120
Query: 121 ------QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEIC 172
+ +K+EL+ LI+SILDDP VSRV EAGF S +K + + + L
Sbjct: 121 QQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLPQLLRYS 180
Query: 173 SQSTP-------VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
P + S+ S+ S S + +E+ + E L
Sbjct: 181 RSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTG--------------DENCKRIGEVLGRG 226
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGD---VPEALRDVKCLPLSISSFRHMN----R 278
+ RN ++VG C ++ + +EKG +P + + + + R N +
Sbjct: 227 KGRNPLLVGVCAYD---ALQSFTEMVEKGRYNILPVEISGLSIICIEKDVLRFFNENCDQ 283
Query: 279 VEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLV 338
+ R EE+ LV+ CLG G+V+N GDL+ R +S V Y S ++EI
Sbjct: 284 GLINSRFEEVGVLVQHCLGAGLVVNFGDLKVFIDRDDASVGVVSYVVSQLTRLLEI---- 339
Query: 339 CGIGENARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI-----PAG------SLSL 386
+ LMG ++++++Y++ + +PS+E W L L I P G SL
Sbjct: 340 ----HGGKVRLMGAVSSYETYLKFLNRYPSIEKDWDLQLLPITSLRPPMGEPYARSSLME 395
Query: 387 SLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTC-CADCSAKFEAEARSLQSSSCN 445
S + S K SG + Q T C C+ K E E +L
Sbjct: 396 SFVPLGGFFSSPCELKGQLSG-----------SYQFTSRCHQCNEKCEQEVAALSKGGFT 444
Query: 446 ---SDSPTSSLPAWLQQYKNEKKATLS-NNDKDSG-------VRDLCKKWNSICNSI-HK 493
+D +LPAWLQ + K KD G + L KKW++IC + H
Sbjct: 445 ASVADQYQPNLPAWLQMAELGKSTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHT 504
Query: 494 QPYYSERTLTFSSASPS 510
QP+ S PS
Sbjct: 505 QPFPKADFYRVGSQVPS 521
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 32/277 (11%)
Query: 557 TSEPSLRLYIPEHKDLKQ--------PLSSNRNSTP------NSTSSSDIMEMEYVHKFK 602
T++ L L+ P K LK+ PL + P N + S+ +
Sbjct: 627 TTDLGLGLFYPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWG 686
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
+ + + +L AL +++ WQ + + I+ T+ CR G +R G + K + W F
Sbjct: 687 QSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHG-----ASPKGDIWFNF 741
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSS------FSSTRADSTEDSRNKRSRDEQ 716
G D +K+KIA LA +++G +F+ + LSS S+ + N + R +
Sbjct: 742 VGPDRFSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKN 801
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
YI A +S P V +E+V+QAD ++ AI +G+ S G EVS+ +A
Sbjct: 802 VVDYI---AGELSKKPLSVVFLENVDQADLLARNSLFHAINTGKFCDSHGREVSINNATF 858
Query: 777 ILSCESFSSRSRACSP---PTKQKSDGCEEEKGAAME 810
+ + F + S P K + KG M+
Sbjct: 859 VTTAR-FRQGDKVLSSGKEPAKYSEERISRAKGLPMQ 894
>gi|357143344|ref|XP_003572888.1| PREDICTED: chaperone protein ClpB-like [Brachypodium distachyon]
Length = 962
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 207/393 (52%), Gaps = 51/393 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ--SHSHPLQCKALE 70
T +AA+V+ +A A RR HA TPLH A +L+ LLR AC + HPL+C+AL+
Sbjct: 26 TPDAAAVLSRAAGDASRRRHAHTTPLHAAAALLSGPAPLLRDACAAGLASPHPLRCRALD 85
Query: 71 LCFNVALNRLPASTSTP-----MLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
LCF VAL+RLP TS+P GG P +SNAL AA KRA AH RR I +
Sbjct: 86 LCFAVALDRLP--TSSPSDSGCFHGGAPLPPPLSNALSAALKRAYAHHRR--IGGEAAAG 141
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
++ + L+++ILDDPSV+RVMREA FSST VK+ + +++S S + ++ ++
Sbjct: 142 DDHRVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPDHSSAFSSTTTSTRL 201
Query: 186 SNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ ++S++ R+E+V V++ L KRN V+VG+ A ++ VV+
Sbjct: 202 HHRQWQDSSSSSSN-----------RDEEVAKVVQVLKRSNKRNPVLVGDT-ADVDAVVQ 249
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRS---CLGRGIVL 302
V+ I++ + A V LP + ++R ++ ++ E+ +RS L + IV+
Sbjct: 250 EVVTMIQRQRLGNAR--VISLPQELGD---LDRSDLVGKIRELGEAIRSSEAALSQSIVV 304
Query: 303 NLGDLEW-------------------AEFRASSSEQVRGYYCSIEHIIME-IGKLVCGIG 342
NLG+LEW A+ R + R + ++ + G+G
Sbjct: 305 NLGNLEWLVEERRHVGFGDAVDQEEAAKRREVVLDTARAAVAEMARVLEQCGSGSGEGVG 364
Query: 343 ENARFWLMGIATFQSYMRCKSGHPSLETLWSLH 375
E R W++G AT +Y++C+ HP+LE+ W +
Sbjct: 365 ERRRVWMIGTATCATYVKCQVHHPALESQWDIQ 397
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ T L L + V WQ + +A+T+ ++ +TW+ F G D
Sbjct: 569 DETTKLARRLAEAVTWQPEAAAAVASTI------------AKARRAKGAADTWVLFAGPD 616
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTED---SRNKRSRDEQSCSYIER 723
A+ K ++A+ L+ VFG+ V +A S + A+ E S +RD R
Sbjct: 617 AEGKRRMAEALSVSVFGAAAVTVRLASSCSAGVDANGGESIVSSWTAPARD--------R 668
Query: 724 FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESF 783
AEA NP RV +++ ++ AD + RA ESGR+ S G LG + + S+
Sbjct: 669 VAEAARANPFRVVVLDGLDHADDLVRAAVARAAESGRLADSRG----LGGGAIFVVMSSW 724
Query: 784 SS 785
SS
Sbjct: 725 SS 726
>gi|295829849|gb|ADG38593.1| AT3G52490-like protein [Capsella grandiflora]
Length = 160
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 25/180 (13%)
Query: 166 AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
AVSLEICS++T SS+K KE +L P+RNEDVM VI +L+ K
Sbjct: 1 AVSLEICSKTT--SSSKPKEGKLLT------------------PVRNEDVMNVINSLVDK 40
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
++RNFV+VGECLA+++GVV+ V++K++K +VPEAL+DVK + LS SSF +R +VE ++
Sbjct: 41 KRRNFVIVGECLATVDGVVKTVMEKVDKKEVPEALKDVKFITLSFSSFGQPSRADVEHKL 100
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEW-AEFRASSSEQVRG----YYCSIEHIIMEIGKLVCG 340
EE++ LVRSC+G+G++LNLGDL W E R S V YC +EH+IMEIGKL G
Sbjct: 101 EELETLVRSCVGKGVILNLGDLNWFVESRTRGSYSVYNNNXSNYCVVEHMIMEIGKLARG 160
>gi|449499195|ref|XP_004160747.1| PREDICTED: uncharacterized LOC101216395 [Cucumis sativus]
Length = 1109
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 251/537 (46%), Gaps = 85/537 (15%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS-----HSHP 63
+Q L +AA + +A+ +A RRGHAQ T LH + +L+ + LR AC ++ +S
Sbjct: 9 RQCLAPDAAHALDEAVAVAHRRGHAQTTSLHAISALLSLPSSALRDACARARKTTAYSPR 68
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN--- 120
LQ KALELC +V+L+R+P++ + P +SN+L+AA KR+QA+QRR EN
Sbjct: 69 LQFKALELCLSVSLDRVPSTQIS-------DDPPVSNSLMAAIKRSQANQRRQP-ENFHL 120
Query: 121 -----QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV----EQAVSLEI 171
Q + VK+EL+ ++SILDDP VSRV EAGF S+++K + Q +
Sbjct: 121 YHQLSHQSSIACVKVELQHFLLSILDDPVVSRVFGEAGFRSSEIKLAIIRPFPQLLRYTS 180
Query: 172 CSQSTPV-------SSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMS 224
S+ P+ S+ ++ + LS D N++ + E L
Sbjct: 181 RSRGPPLFLCNLMDCSDPNRRGFLFPLSGFR------------DGDNNDNNRRIGEVLGR 228
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGD---VPEALRDVKCLPLSISSFRHMNR--- 278
R RN ++VG S ++G + IEK + +PE L V+ + L R+++
Sbjct: 229 NRGRNPLLVG---VSAYVALKGFTNAIEKRNDNFLPEELAGVRTICLENDFSRYLSENSE 285
Query: 279 -VEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKL 337
+ + E+ +V G+++N GDL+ F +S R H++ ++ KL
Sbjct: 286 MGSLNMKFVEVVQMVEQSPKPGLIVNFGDLK--AFVGENSTDDRA-----SHVVGQLKKL 338
Query: 338 VCGIGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTI--------PAGSLSLSL 388
V G+ + WL+G A ++++Y+ + PS+E W LH L I P SL S
Sbjct: 339 VDVHGD--KVWLIGAASSYETYLSFVTKFPSIEKDWDLHLLPITSLRPESYPRSSLMGSF 396
Query: 389 ITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDS 448
+ + S + VS+ + ++ L C C + A ++ + + S+
Sbjct: 397 VPLGGFFSTPSDA-TIPLNVSY-----QHPSRCLQCDKSCEEEVIAASKGVFTPPL-SEQ 449
Query: 449 PTSSLPAWLQQYKNEKKATLSNNDKDSG------VRDLCKKWNSICNSIHKQPYYSE 499
SSLP+W+Q + +D G + KKW++IC +H P E
Sbjct: 450 YQSSLPSWMQMTELSNFDAFDAKTRDDGLVLSAKIAGFQKKWDNICQRLHHGPPLKE 506
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
++N+ ++ SL L+++V WQ V I+ T+ +R G S ++ + W F
Sbjct: 687 QVNAMDVKSLFRLLKERVFWQDQAVSIISQTI-----SQRQRHG-----SNLRGDIWFNF 736
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G D K+++ +A +++G+ + F+ + LSS +T R+ S + + + ++
Sbjct: 737 VGPDKFGKKRVGIAVAEIMYGNKDQFICVDLSSQDGMVNPNTPRVRS-YSAEFRGKTVLD 795
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
A + P + ++E+V++A+ Q +AI++G++ G EVS+ +AI + + S
Sbjct: 796 FVAAELRKQPLSIVMLENVDKAELLDQNRLSQAIQTGKLSDLQGREVSIKNAIFMTTTTS 855
Query: 783 FSSRSRACSP 792
+ + P
Sbjct: 856 LITEHQITFP 865
>gi|297736015|emb|CBI24053.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 233/526 (44%), Gaps = 80/526 (15%)
Query: 334 IGKLVCGIGE--NARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT- 390
+GKL+ GE N R WL+G AT ++Y+RC+ HPS+E W L + I A + L +
Sbjct: 1 MGKLLATFGEGSNGRLWLIGTATCETYLRCQVYHPSMENDWDLQAVPIAARTPVPGLFSR 60
Query: 391 ------TDSDLQSQSTSKKAESGVSWL---LFEGEEENKQLTCCADCSAKFEAEARSLQS 441
S ++S + K + ++ L + E + ++++CC C +E E L+
Sbjct: 61 FGTNGILSSSVESLTPMKNFPTAITALPRRVSENMDPAQKMSCCPQCMENYEQELGKLEG 120
Query: 442 SSCNSDSPT-------SSLPAWLQQYK---NEKKATLSNNDKDSGV------RDLCKKWN 485
S SSLP WL+ K + K T + KD + +DL KKWN
Sbjct: 121 QEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELIWKQKPQDLLKKWN 180
Query: 486 SICNSIHKQPYYSERTLTFSSASPSS-STSGFSYDQQYPNFHKTHRDWAVVEPKQSWREH 544
C +H P + + L +P++ S +G ++ T +PK +
Sbjct: 181 DTC--LHLHPNFHQPNLNSERITPTALSMTGL--------YNATLLGRQAFQPKLQPTRN 230
Query: 545 HFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI-----------M 593
S+ ++P + P ++ L R N T++ I +
Sbjct: 231 LGETLQLNSNLVANQPCEQAVTPPGSPVRTDLVLGRTKI-NETTTEKIHKEHVKDFFQCI 289
Query: 594 EMEYVHKFKELNSENLT--------SLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK 645
E ++KF EL ++ L+ L L +KV WQ+D +A TV +C+ G +R+
Sbjct: 290 SSESLNKFHELQNDKLSPLDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRR 349
Query: 646 GKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE 705
+ K + WL F G D K+K+A L+ LV G N + I L S R D E
Sbjct: 350 S-----AGSKGDIWLLFTGPDRIGKKKMAAALSELVCGV--NPIMICLGS----RRDDGE 398
Query: 706 DSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSS 765
N R + + ++R AEAV N V ++ED+++AD Q KRA+E GR+V S
Sbjct: 399 LDMNFRGK-----TAVDRIAEAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSH 453
Query: 766 GDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
G EVSLG+ I IL+ ++ S T EEK A++ G
Sbjct: 454 GREVSLGNVIFILTANWLVDNRKSLSNSTL-----LNEEKLASIAG 494
>gi|225434576|ref|XP_002279036.1| PREDICTED: uncharacterized protein LOC100241532 [Vitis vinifera]
Length = 1106
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 244/533 (45%), Gaps = 82/533 (15%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LT EAA + A+ +ARRR HAQ T LH + +LA + LR AC + ++S L
Sbjct: 9 RQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARARSSAYSPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS----IEN 120
Q +ALEL V+L+RLP+S + + P +SN+L+AA KR+QA QRR ++
Sbjct: 69 QFRALELSVGVSLDRLPSSKA-------LEEPPVSNSLMAAIKRSQASQRRHPENFHLQQ 121
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
Q Q +++EL+ I+SILDDP VSRV EAGF S +K + Q +PVS
Sbjct: 122 QNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIQP-------PLSPVSR 174
Query: 181 NKSKESNVLVLSQTASATKVSK------PRVSLDPIRNEDVMYVIENLMSKRKRNFVVVG 234
+ L + + VS +E+ + E L K +N +++G
Sbjct: 175 FPRTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLTRKTGKNPLLIG 234
Query: 235 ECLASIEGVVRGVIDKIE--KGDV-PEALRDVK--CLPLSISSF--RHMNRVEVEQRVEE 287
C + +R D +E KGDV P + + C+ IS F R + ++ +++E
Sbjct: 235 VCSSD---ALRCFADCVERRKGDVLPAEIAGLNLICIEKEISEFVGRGGSEDKLGLKLKE 291
Query: 288 IKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARF 347
+ ++ G GI +N G+L +A + G S + KL + +
Sbjct: 292 LGHMAEQYSGPGIAVNFGEL-----KALVGDDAPGEAAS-----FVVSKLTSLLKAHPNL 341
Query: 348 WLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAES 406
WLMG ++++Y++ + PS+E W LH L I + S+ + S L
Sbjct: 342 WLMGSSGSYETYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSRSSLMG--------- 392
Query: 407 GVSWLLFEG------------EEENKQLTCCADCSAKFEAEARSL---QSSSCNSDSPTS 451
S++ F G N+ +T C C+ K E E ++ S+ +D +
Sbjct: 393 --SFVPFAGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSG 450
Query: 452 SLPAWLQQYK-NEKKATLSNNDKDSG------VRDLCKKWNSICNSIHKQPYY 497
+LP+WL + + K + KD G V + KKW IC +H P Y
Sbjct: 451 TLPSWLLMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLHHAPPY 503
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 14/186 (7%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
++++ + SL AL KV WQ + + I+ TV CR+G RR G S +K + WL F
Sbjct: 685 QMDARDFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHG-----SNLKGDIWLSF 739
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALS-SFSSTRADSTEDSRNKRS-----RDEQ 716
G D K++IA LA ++F S + VS+ L S +++S D S R +
Sbjct: 740 LGPDKVGKKRIAAALAEIMFRSSKSLVSVDLGYQHGSNQSNSIFDQHELNSCGIEFRGKT 799
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
YI A + P V +E++++AD Q +AI +G+ S G E+S+ I
Sbjct: 800 ITDYI---AGELRKKPQLVVFLENIDKADLLVQTSLSQAIRTGKFPDSHGREISINHMIF 856
Query: 777 ILSCES 782
+ + S
Sbjct: 857 VTTATS 862
>gi|147866119|emb|CAN78825.1| hypothetical protein VITISV_006557 [Vitis vinifera]
Length = 1088
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 244/533 (45%), Gaps = 82/533 (15%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LT EAA + A+ +ARRR HAQ T LH + +LA + LR AC + ++S L
Sbjct: 9 RQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARARSSAYSPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS----IEN 120
Q +ALEL V+L+RLP+S + + P +SN+L+AA KR+QA QRR ++
Sbjct: 69 QFRALELSVGVSLDRLPSSKA-------LEEPPVSNSLMAAIKRSQASQRRHPENFHLQQ 121
Query: 121 QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
Q Q +++EL+ I+SILDDP VSRV EAGF S +K + I +PVS
Sbjct: 122 QNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAM-------IXPPLSPVSR 174
Query: 181 NKSKESNVLVLSQTASATKVSK------PRVSLDPIRNEDVMYVIENLMSKRKRNFVVVG 234
+ L + + VS +E+ + E L K +N +++G
Sbjct: 175 FPRTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLTRKTGKNPLLIG 234
Query: 235 ECLASIEGVVRGVIDKIE--KGDV-PEALRDVK--CLPLSISSF--RHMNRVEVEQRVEE 287
C + +R D +E KGDV P + + C+ IS F R + ++ +++E
Sbjct: 235 VCSSD---ALRCFADCVERRKGDVLPAEIAGLNLICIEKEISEFVGRGGSEDKLGLKLKE 291
Query: 288 IKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARF 347
+ ++ G GI +N G+L +A + G S + KL + +
Sbjct: 292 LGHMAEQYSGPGIAVNFGEL-----KALVGDDAPGEAAS-----XVVSKLTSLLKAHPNL 341
Query: 348 WLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAES 406
WLMG ++++Y++ + PS+E W LH L I + S+ + S L
Sbjct: 342 WLMGSSGSYETYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSRSSLMG--------- 392
Query: 407 GVSWLLFEG------------EEENKQLTCCADCSAKFEAEARSL---QSSSCNSDSPTS 451
S++ F G N+ +T C C+ K E E ++ S+ +D +
Sbjct: 393 --SFVPFAGFFSTPTDFKNPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSG 450
Query: 452 SLPAWLQQYK-NEKKATLSNNDKDSG------VRDLCKKWNSICNSIHKQPYY 497
+LP+WL + + K + KD G V + KKW IC +H P Y
Sbjct: 451 TLPSWLLMAEPDTNKGADAVKAKDDGRALNDKVLGVQKKWYDICQRLHHAPPY 503
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS-SFSSTRADSTEDSRNK 710
S +K + WL F G D K++IA LA ++F S + VS+ L S +++S D
Sbjct: 711 SNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRSSXSLVSVDLGYQHGSNQSNSIFDQHEL 770
Query: 711 RS-----RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSS 765
S R + YI A + P V +E++++AD Q +AI +G+ S
Sbjct: 771 NSCGIEFRGKTITDYI---AGELRKKPQXVVFLENIDKADLLXQTSLSQAIRTGKFPDSH 827
Query: 766 GDEVSLGDAIVILSCES 782
G E+S+ I + + S
Sbjct: 828 GREISINHMIFVTTATS 844
>gi|356569527|ref|XP_003552951.1| PREDICTED: uncharacterized protein LOC100776148 [Glycine max]
Length = 1097
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 172/579 (29%), Positives = 275/579 (47%), Gaps = 99/579 (17%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSH 62
T +Q LT EAA + A+++ARRR HAQ T LH + +L+ + LR AC + S+S
Sbjct: 7 TARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPSASLRDACSRCRSCSYSP 66
Query: 63 PLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR------- 115
LQ +ALEL V+L+RLP + S+ GG + P +SN+L+AA KR+QA+QRR
Sbjct: 67 RLQLRALELSVGVSLDRLPTTKSSGGGGGGEEGPPVSNSLMAAIKRSQANQRRHPDSFHL 126
Query: 116 -GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL--EIC 172
++ QQQ +K+EL+ I+SILDDP VSRV EAGF S +K + Q I
Sbjct: 127 MQMMQQQQQTTSLLKVELKHFILSILDDPIVSRVFAEAGFRSYDIKLALLQPPPPPSRIF 186
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVV 232
S+ TP V + + T +P LD E+ ++E + K KRN ++
Sbjct: 187 SRLTP---------PVFLCNLEPVQTGSFQPGSRLD----ENCRRIVEVVARKTKRNPLL 233
Query: 233 VG-ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPL--SISSF-RHMNRVEVEQRVEEI 288
+G S+ V V+ + G +P L + + + I F R R E+ E +
Sbjct: 234 MGVYAKTSLRSFVE-VVKNGKGGVLPCELNGLSVVSVEKEIGEFLREGGR--GEKIFEHV 290
Query: 289 KNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFW 348
LV C G G+V+ G++E F ++E+ + ++ ++ +L+ GI + W
Sbjct: 291 SRLVEQC-GAGVVVCFGEIEV--FVGGNNEE-----GDVGFVVSQLTRLL-GI-HGGKVW 340
Query: 349 LMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESG 407
L+G+A T ++Y + P+++ W LH LT+ + + S+ + S L
Sbjct: 341 LLGVAGTSEAYSKFLRLFPTVDKDWDLHLLTMTSATPSMEGLYPKSSLMG---------- 390
Query: 408 VSWLLFEG-----EEENKQLTC--------CADCSAKFEAEARSL---QSSSCNSDSPTS 451
S++ F G E L+C C C+ K E E + ++ S ++
Sbjct: 391 -SFVPFGGFFSTPSEFKSPLSCTNASSLSRCDSCNEKCEQEVADILKVGPATSASGYSST 449
Query: 452 SLPAWLQQY-----------KNEKKATLSNNDKDSG----VRDLCKKWNSICNSIHKQPY 496
SLP WLQ+ KNE + N++++ + L +KW+ IC +H+
Sbjct: 450 SLP-WLQKVNVDSDRRLDVAKNELHHPVQTNEENTSLNKKIFGLQRKWSDICQRLHQNRS 508
Query: 497 YSERTLT---FSSAS-------PSSSTSGFSYDQ-QYPN 524
E +T F + S P SS+ G + + QYPN
Sbjct: 509 LPEFDITKARFQATSHEGFQFGPGSSSKGPLHSEIQYPN 547
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
+ S + L +KV WQ + +Y I TV +CRS GK S V+ + WL F G D
Sbjct: 689 DFKSFYHLLTEKVGWQDEAIYAINRTVSRCRSCA----GKRSSGSHVRADIWLAFLGPDR 744
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFS-STRADSTEDSRNKRSRDE-QSCSYIERFA 725
K K+A LA ++FG+ + +++ LSS S +S + +N D + ++ A
Sbjct: 745 LGKRKVASALAEILFGNKQSLITVDLSSQDRSYPTNSIFEFQNTYCHDVLMRKTVLDYVA 804
Query: 726 EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESF 783
+S PH V +E+V+QAD+ Q +AI++G+ S G E+S+ +A+ I++ F
Sbjct: 805 GELSKKPHSVVFLENVDQADFLVQNSLFQAIKTGKFPYSHGREISINNAMFIVTSSVF 862
>gi|356498951|ref|XP_003518309.1| PREDICTED: uncharacterized protein LOC100804458 [Glycine max]
Length = 1097
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 245/557 (43%), Gaps = 88/557 (15%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ---------- 58
+Q LT EAA + A+ +ARRR HAQ T LH + +LA + LR AC +
Sbjct: 9 RQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRARSGAARFSA 68
Query: 59 SHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--- 115
++S LQ +ALEL V+L+RLP+S ST GG + P +SN+L+AA KR+QA+QRR
Sbjct: 69 TYSPRLQFRALELSVGVSLDRLPSSKSTA--GGSDEEPPVSNSLMAAIKRSQANQRRHPE 126
Query: 116 -----GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
+ +K+EL+ ++SILDDP VSRV EAGF S +K + Q
Sbjct: 127 SFHMFQQSQQGTTTTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLALLQPPLPP 186
Query: 171 I---CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIR-NEDVMYVIENLMSKR 226
+ ++S PV +LDP R +E++ ++E L K
Sbjct: 187 VQHRFNRSPPVF------------------------LCNLDPARPDENIRRILEVLARKN 222
Query: 227 KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRD---VKCLPLSISSFRHMNRVEVEQ 283
KRN +++G + +RG ++ + G L V CL I F E+
Sbjct: 223 KRNPLLMG---VYAKNALRGFVEMVRNGRGGSVLGSELRVVCLEREIGEFVKKGGSGEEK 279
Query: 284 ---RVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCG 340
R++E++ S G G+V++ G++E + VR + + ++ G+ V
Sbjct: 280 FGVRLKELEQCESS--GSGVVVSFGEIEVFLGDDVDVDAVRFVFSGLTRLLEIRGEKVS- 336
Query: 341 IGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQS 399
L+G+A T +Y + P++E W LH LT+ + + S+ + + S L
Sbjct: 337 --------LLGVAETSHAYSKLLGLFPNVENDWDLHLLTVTSATPSMEGLYSKSSLMGSF 388
Query: 400 TSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQ 459
+ N T C C+ K E E L S S+ WLQ+
Sbjct: 389 VPFGGFFSTPEIRSPVSCTNAPFTRCDTCNKKCEQEVADLL--KVGPSSSNSTSSPWLQK 446
Query: 460 Y------------KNEKKATLSNNDKDSGVRD----LCKKWNSICNSIHKQPYYSERTLT 503
KNE + N++++ + D KKWN IC +H + ++
Sbjct: 447 VVNVETHRGSDAAKNELHHLVQTNEENTSLNDKILGFQKKWNDICQRLHHTSSLPQFDIS 506
Query: 504 FS-SASPSSSTSGFSYD 519
+ S SP+ S F D
Sbjct: 507 QTRSQSPTLEVSRFGPD 523
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
+ SL L +KV WQ + I+ T+ C+SG +R+G S + + WL F G D
Sbjct: 684 DFKSLNRLLNEKVGWQDQAIRAISQTLSLCKSGAGKRRG-----SHGRADIWLAFLGPDR 738
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRA-DSTEDSRNKRSRDE-QSCSYIERFA 725
K KIA LA +FG+ + +S+ L +S + + R D + + ++ A
Sbjct: 739 LGKRKIASALAETIFGNPESLISVDLGFQDGFYPLNSVFEYQKSRCYDVLRRKTILDYIA 798
Query: 726 EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+S PH V +E+V++AD Q +A+ +G+ S G +S+ + I +++
Sbjct: 799 GELSKKPHSVVFLENVDKADVLVQNSLLQALRTGKFSYSHGRAISINNTIFVVT 852
>gi|295829841|gb|ADG38589.1| AT3G52490-like protein [Capsella grandiflora]
gi|295829843|gb|ADG38590.1| AT3G52490-like protein [Capsella grandiflora]
gi|295829845|gb|ADG38591.1| AT3G52490-like protein [Capsella grandiflora]
gi|295829851|gb|ADG38594.1| AT3G52490-like protein [Capsella grandiflora]
gi|345291325|gb|AEN82154.1| AT3G52490-like protein, partial [Capsella rubella]
gi|345291327|gb|AEN82155.1| AT3G52490-like protein, partial [Capsella rubella]
gi|345291329|gb|AEN82156.1| AT3G52490-like protein, partial [Capsella rubella]
gi|345291331|gb|AEN82157.1| AT3G52490-like protein, partial [Capsella rubella]
gi|345291333|gb|AEN82158.1| AT3G52490-like protein, partial [Capsella rubella]
gi|345291335|gb|AEN82159.1| AT3G52490-like protein, partial [Capsella rubella]
gi|345291337|gb|AEN82160.1| AT3G52490-like protein, partial [Capsella rubella]
Length = 160
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 121/180 (67%), Gaps = 25/180 (13%)
Query: 166 AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
AVSLEICS++T SS+K KE +L P+RNEDVM VI +L+ K
Sbjct: 1 AVSLEICSKTT--SSSKPKEGKLLT------------------PVRNEDVMNVINSLVDK 40
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
++RNFV+VGECLA+++GVV+ V++K++K +VPEAL+DVK + LS SSF +R +VE ++
Sbjct: 41 KRRNFVIVGECLATVDGVVKTVMEKVDKKEVPEALKDVKFITLSFSSFGQPSRADVEHKL 100
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEW-AEFRASS----SEQVRGYYCSIEHIIMEIGKLVCG 340
EE++ LVRSC+G+G++LNLGDL W E R YC +EH+IMEIGKL G
Sbjct: 101 EELETLVRSCVGKGVILNLGDLNWFVESRTRGSYSVYNNNNSNYCVVEHMIMEIGKLARG 160
>gi|357490799|ref|XP_003615687.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
gi|355517022|gb|AES98645.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
Length = 1092
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 250/536 (46%), Gaps = 98/536 (18%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTAC--------LQSH 60
+Q LT EAA + A+ +ARRR HAQ T LH + +L+ + LR A S
Sbjct: 9 RQFLTDEAARALDDAVAVARRRSHAQTTSLHTISALLSLPSSSLRDAICRARTAVRFPSF 68
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS--- 117
SH L +ALEL V+L+RLP+S +P+ + P +SN+L+AA KR+QA+QRR
Sbjct: 69 SHRLHLRALELSVGVSLDRLPSSKPSPV-----EEPPVSNSLMAAIKRSQANQRRSPESF 123
Query: 118 ---IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQ 174
N P L +K+EL+ ++SILDDP V+RV EAGF S VK + Q
Sbjct: 124 HFYNHNGTTPSL-LKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALLQP-------- 174
Query: 175 STPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIR---NEDVMYVIENL-MSKRKRNF 230
PV S S+ + S + R L P +E+ + E + M +K N
Sbjct: 175 --PVQS-----SSRFLSSPPVFLCNLEPGRTGLTPFPLGVDENSRRIAEVIAMKGKKMNP 227
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALR------DVKCLPLSISSFRHMNRVEVEQ- 283
+++G + R ++ ++KG V C+ I F E +
Sbjct: 228 LLMG---VYAKDAFRNFVELLQKGLGGGLFPPGMSGLSVVCVEKEIVEFVKDGGSEEKMG 284
Query: 284 -RVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIG 342
R +E+ V CLG G+V+ G++E + V G I+ ++ E+G+L+ G
Sbjct: 285 LRFKEVGCEVEKCLGAGVVVGFGEIE-----VLVGDDVDG--GCIKFVVSELGRLLEVYG 337
Query: 343 ENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQ--- 398
E + WLMG+A T ++Y + P +E W LH +T+ + + S+ + + S L
Sbjct: 338 E--KVWLMGVAETSEAYSKFLRLFPGVEKDWDLHLVTVTSATPSMEGLYSKSSLMGSFVP 395
Query: 399 -----STSKKAESGVSWLLFEGEEENKQLTCCADCSAKFE---AEARSLQSSSCNSDSPT 450
ST +++S +S N T C C+ K+E A+A + ++ S+ T
Sbjct: 396 FGGFFSTPPESKSPIS-------SANASFTRCDKCNEKYEQEVADAFKVDPATLASNY-T 447
Query: 451 SSLPAWLQQY-------------KNEKKATLSNNDKDSGVRDLCKKWNSICNSIHK 493
+SLP W ++ NE+ +L NDK G + KKWN IC +H+
Sbjct: 448 TSLP-WFKKVVDVDTHGGLDVAKVNEENTSL--NDKILGFQ---KKWNDICQRLHQ 497
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD-HSEVKEETWLF 661
+ +S + SL L +KV WQ + DI T+ +SG +GK +D H + + W
Sbjct: 672 KFDSVDFKSLNKLLFEKVGWQNQAICDINRTLSLHKSG----EGKSRDLHG--RADIWFA 725
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSY- 720
F G D K+KIA LA +FG+ + +S+ L N ++S Y
Sbjct: 726 FLGPDRIGKKKIASALAETIFGNTESIISLDLGFQDGLYPP------NSIFECQKSLCYD 779
Query: 721 -------IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
++ A +S NPH V +E+V++AD+ Q +AI G+ S G E+S+ +
Sbjct: 780 LFIRKTVVDYIAGELSKNPHSVVFLENVDKADFLVQSSLLQAIRRGKFPDSRGREISINN 839
Query: 774 AIVILS 779
AI +LS
Sbjct: 840 AIFLLS 845
>gi|295829847|gb|ADG38592.1| AT3G52490-like protein [Capsella grandiflora]
Length = 160
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 121/180 (67%), Gaps = 25/180 (13%)
Query: 166 AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
AVSLEICS++T SS+K KE +L P+ NEDVM VI +L+ K
Sbjct: 1 AVSLEICSKTT--SSSKPKEGKLLT------------------PVXNEDVMNVINSLVDK 40
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
++RNFV+VGECLA+++GVV+ V++K++K +VPEAL+DVK + LS SSF +R +VE ++
Sbjct: 41 KRRNFVIVGECLATVDGVVKTVMEKVDKKEVPEALKDVKFITLSFSSFGQPSRADVEHKL 100
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEW-AEFRA----SSSEQVRGYYCSIEHIIMEIGKLVCG 340
EE++ LVRSC+G+G++LNLGDL W E R S YC +EH+IMEIGKL G
Sbjct: 101 EELETLVRSCVGKGVILNLGDLNWFVESRTRGSYSVYNNNNSNYCVVEHMIMEIGKLARG 160
>gi|449472677|ref|XP_004153665.1| PREDICTED: uncharacterized protein LOC101204506 [Cucumis sativus]
Length = 1094
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 247/544 (45%), Gaps = 55/544 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHS----HPL 64
+Q LT EAA + A+++ARRR HAQ T LH + +L+ + LR AC ++ S L
Sbjct: 9 RQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRARSCAYLPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG-------S 117
Q +AL+L V+L+RLP+S T P +SN+L+AA KR+QA+QRR
Sbjct: 69 QFRALDLSVGVSLDRLPSSKPTDE-------PPVSNSLMAAIKRSQANQRRHPESFHLHQ 121
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV------EQAVSLEI 171
I NQQQ +K+EL+ I+SILDDP VSRV EAGF S +K + A
Sbjct: 122 IHNQQQTPSILKVELKYFILSILDDPIVSRVFGEAGFRSCDIKLAIMHPPLTHHASRFPR 181
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFV 231
++ P+ +S+ L S + D + + + E L+ K RN +
Sbjct: 182 SARCPPIFLCNLTDSD---LGHRNFPFPFSGGYGNGDD--DANTRRIGEILVRKTGRNPL 236
Query: 232 VVGECLASIEGVVRGVIDKIEKGDVPEALRDVK--CLPLSISSFRHMN--RVEVEQRVEE 287
++G A + + + +P + ++ C+ IS F N + + + EE
Sbjct: 237 LIGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEE 296
Query: 288 IKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARF 347
I +++ C G GIV+N G+L+ E E+V + + ++ KL N +
Sbjct: 297 IFGMIQQCSGPGIVVNYGELKEDE------EEVHNGMSFVVSQLTDLLKLY-----NGKV 345
Query: 348 WLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAES 406
WL+G + T++ + + + ++E W LH L I + + S + S
Sbjct: 346 WLIGAVGTYKMHEKFLAKFSAIEKDWDLHLLPITSKPMVDVFGAKSSFMGSFVPFGGFFP 405
Query: 407 GVSWLLFEGEEENKQLTCCADCSAKFEAEARSL---QSSSCNSDSPTSSL---PAWLQQY 460
S + N+ T C C+ KFE E ++ SS+ SSL P +
Sbjct: 406 SQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLHMSPTEIDAK 465
Query: 461 KNEKKATLSNNDKDS---GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFS 517
E + +D+ + V L KKWN IC +H++ + + ++ + S + F+
Sbjct: 466 CKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTMHGVSFESPRFA 524
Query: 518 YDQQ 521
D +
Sbjct: 525 LDHE 528
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 604 LNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
L+ SL NAL +KV WQ I T+L+CR+G +R+ S + + WL F
Sbjct: 682 LDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRS-----SNSRGDIWLTFL 736
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFS-STRADSTEDSRNKRSRDE--QSCSY 720
G D K KI+ LA L+FGS N +S+ S R +S D + DE + +
Sbjct: 737 GPDMMGKRKISFALAELMFGSRENLISVDFGSQDRDRRHNSLFDCQGLNGYDERFRGQTV 796
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++ A + P V L+E+V++AD ++ +AI +G+ + S G + ++ + I +
Sbjct: 797 VDYVAGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFL 853
>gi|147783009|emb|CAN72301.1| hypothetical protein VITISV_024923 [Vitis vinifera]
Length = 1166
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 198/402 (49%), Gaps = 64/402 (15%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LT EAA + +A+ +ARRRGHAQ T LH + ML+ + LLR AC + ++S L
Sbjct: 9 RQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARARNSAYSARL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN---- 120
Q KALELC +V+L+R+P++ P +SN+L+AA KR+QA+QRR EN
Sbjct: 69 QFKALELCLSVSLDRVPSTQLA-------DDPPVSNSLMAAIKRSQANQRRQP-ENFQLY 120
Query: 121 ------QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEIC 172
+ +K+EL+ LI+SILDDP VSRV EAGF S +K + + + L
Sbjct: 121 QQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLPQLLRYS 180
Query: 173 SQSTP-------VSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
P + S+ S+ S S + +E+ + E L
Sbjct: 181 RSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTG--------------DENCKRIGEVLGRG 226
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGD---VPEALRDVKCLPLSISSFRHMN----R 278
+ RN ++VG C ++ + +EKG +P + + + + R N +
Sbjct: 227 KGRNPLLVGVCAYD---ALQSFTEMVEKGRYNILPVEISGLSIICIEKDVLRFFNENCDQ 283
Query: 279 VEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLV 338
+ R EE+ LV+ CLG G+V+N GDL+ R +S V Y S ++EI
Sbjct: 284 GLINSRFEEVGVLVQHCLGAGLVVNFGDLKVFIDRDDASVGVVSYVVSQLTRLLEI---- 339
Query: 339 CGIGENARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI 379
+ LMG ++++++Y++ + +PS+E W L L I
Sbjct: 340 ----HGGKVRLMGAVSSYETYLKFLNRYPSIEKDWDLQLLPI 377
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 32/277 (11%)
Query: 557 TSEPSLRLYIPEHKDLKQ--------PLSSNRNSTP------NSTSSSDIMEMEYVHKFK 602
T++ L L+ P K LK+ PL + P N + S+ +
Sbjct: 694 TTDLGLGLFYPPSKQLKKDAKQTHLGPLPDFSSRYPANVDLVNGSISNPSSSCSCPDSWG 753
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
+ + + +L AL +++ WQ + + I+ T+ CR G +R G + K + W F
Sbjct: 754 QSDQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHG-----ASPKGDIWFNF 808
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSS------FSSTRADSTEDSRNKRSRDEQ 716
G D +K+KIA LA +++G +F+ + LSS S+ + N + R +
Sbjct: 809 VGPDRFSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKN 868
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
YI A +S P V +E+V+QAD ++ AI +G+ S G EVS+ +A
Sbjct: 869 VVDYI---AGELSKKPLSVVFLENVDQADLLARNSLFHAINTGKFCDSHGREVSINNATF 925
Query: 777 ILSCESFSSRSRACSP---PTKQKSDGCEEEKGAAME 810
+ + F + S P K + KG M+
Sbjct: 926 VTTAR-FRQGDKVLSSGKEPAKYSEERISRAKGLPMQ 961
>gi|255591162|ref|XP_002535454.1| conserved hypothetical protein [Ricinus communis]
gi|223523058|gb|EEF26929.1| conserved hypothetical protein [Ricinus communis]
Length = 398
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 196/401 (48%), Gaps = 56/401 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP----L 64
+Q LT EAA ++ A+++ARRR HAQ T LH + +LA + LR AC ++ P L
Sbjct: 9 RQCLTDEAARALQDAVSVARRRSHAQTTSLHAVSALLALPSSTLRDACARARKSPCSSRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG-------S 117
Q +ALELC V+L+RLP+S + P ISN+L+AA KR+QA+QRR
Sbjct: 69 QFRALELCVGVSLDRLPSSKAL-------DEPPISNSLMAAIKRSQANQRRHPDNFHLQQ 121
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
I QQP +K+EL+ I+SILDDP VSRV+ EAGF S +K + + P
Sbjct: 122 IHCNQQPPSVLKVELKHFILSILDDPIVSRVLGEAGFRSCDIKLAIIHP------PITQP 175
Query: 178 VSSNKSKESNVLVLSQTASATKVSK-----PRVSLDPIRNEDVMYVIENLMSKRKRNFVV 232
++S+ + L + + V + P D +E+ + E L + ++ ++
Sbjct: 176 PKFSRSRCPPPIFLCNL-NGSDVGRGGHGYPFSGYDDRGDENCRRIGEKL--GKVKSLLL 232
Query: 233 VGECLASIEGVVRGVIDKIEKGD--VPEALRDVKCLPL--SISSF-------RHMNRVEV 281
+G C + ++ KG +P + + + + I F + + ++
Sbjct: 233 LGVCASDALSRFIECVNSDNKGGFLLPREIVGLSVVSIEKEIIEFVSEGGNDKEKAKEKM 292
Query: 282 EQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI 341
+ EE++N + CLG G+VLN G+L+ S Y + KL G+
Sbjct: 293 GFKFEELRNKLEQCLGVGVVLNFGELKVLVDENVFSSDAASYL---------VEKLT-GL 342
Query: 342 GENAR--FWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTI 379
E+ R WLMG AT+++Y + PS+E W LH L I
Sbjct: 343 LEDFRNKLWLMGAAATYETYSKFLGKFPSIEKDWDLHLLPI 383
>gi|449441584|ref|XP_004138562.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101216395 [Cucumis sativus]
Length = 1123
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 251/562 (44%), Gaps = 123/562 (21%)
Query: 16 AASVVKQAMT----LARRRGHAQVTPLHVANTMLAASTGLLRTACLQS-----HSHPLQC 66
A S+ +Q + +A RRGHAQ T LH + +L+ + LR AC ++ +S LQ
Sbjct: 4 AVSLARQCLAPDXAVAHRRGHAQTTSLHAISALLSLPSSALRDACARARKTTAYSPRLQF 63
Query: 67 KALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN------ 120
KALELC +V+L+R+P++ + P +SN+L+AA KR+QA+QRR EN
Sbjct: 64 KALELCLSVSLDRVPSTQIS-------DDPPVSNSLMAAIKRSQANQRRQP-ENFHLYHQ 115
Query: 121 --QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV----EQAVSLEICSQ 174
Q + VK+EL+ ++SILDDP VSRV EAGF S+++K + Q + S+
Sbjct: 116 LSHQSSIACVKVELQHFLLSILDDPVVSRVFGEAGFRSSEIKLAIIRPFPQLLRYTSRSR 175
Query: 175 STPV-------SSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRK 227
P+ S+ ++ + LS D N++ + E L R
Sbjct: 176 GPPLFLCNLMDCSDPNRRGFLFPLSGFR------------DGDNNDNNRRIGEVLGRNRG 223
Query: 228 RNFVVVGECLASIEGVVRGVIDKIEKGD---VPEALRDVKCLPLSISSFRHMNR----VE 280
RN ++VG S ++G + IEK + +PE L V+ + L R+++
Sbjct: 224 RNPLLVG---VSAYVALKGFTNAIEKRNDNFLPEELAGVRTICLENDFSRYLSENSEMGS 280
Query: 281 VEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCG 340
+ + E+ +V G+++N GDL+ F +S R H++ ++ KLV
Sbjct: 281 LNMKFVEVVQMVEQSPKPGLIVNFGDLK--AFVGENSTDDRA-----SHVVGQLKKLVDV 333
Query: 341 IGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTI--------PAGSLSLSLITT 391
G+ + WL+G A ++++Y+ + PS+E W LH L I P SL S +
Sbjct: 334 HGD--KVWLIGAASSYETYLSFVTKFPSIEKDWDLHLLPITSLRPESYPRSSLMGSFVPL 391
Query: 392 DSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTS 451
+ S + VS+ + ++ L C C + A ++ + + S+ S
Sbjct: 392 GGFFSTPSDA-TIPLNVSY-----QHPSRCLQCDKSCEEEVIAASKGVFTPPL-SEQYQS 444
Query: 452 SLPAWLQQYKNEKKATLSNND----------------------------KDSG------V 477
SLP+W+Q + LSN D +D G +
Sbjct: 445 SLPSWMQMTE------LSNFDAFDAKIEAIYLSISILFISHSSWCFVQTRDDGLVLSAKI 498
Query: 478 RDLCKKWNSICNSIHKQPYYSE 499
KKW++IC +H P E
Sbjct: 499 AGFQKKWDNICQRLHHGPPLKE 520
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
++N+ ++ SL L+++V WQ V I+ T+ +R G S ++ + W F
Sbjct: 701 QVNAMDVKSLFRLLKERVFWQDQAVSIISQTI-----SQRQRHG-----SNLRGDIWFNF 750
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G D K+++ +A +++G+ + F+ + LSS +T R+ S + + + ++
Sbjct: 751 VGPDKFGKKRVGIAVAEIMYGNKDQFICVDLSSQDGMVNPNTPRVRS-YSAEFRGKTVLD 809
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
A + P + ++E+V++A+ Q +AI++G++ G EVS+ +AI + + S
Sbjct: 810 FVAAELRKQPLSIVMLENVDKAELLDQNRLSQAIQTGKLSDLQGREVSIKNAIFMTTTTS 869
Query: 783 FSSRSRACSP 792
+ + P
Sbjct: 870 LITEHQITFP 879
>gi|449455148|ref|XP_004145315.1| PREDICTED: uncharacterized protein LOC101203741 [Cucumis sativus]
Length = 1090
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 148/544 (27%), Positives = 245/544 (45%), Gaps = 59/544 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHS----HPL 64
+Q LT EAA + A+++ARRR HAQ T LH + +L+ + LR AC ++ S L
Sbjct: 9 RQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRARSCAYLPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG-------S 117
Q +AL+L V+L+RLP+S T P +SN+L+AA KR+QA+QRR
Sbjct: 69 QFRALDLSVGVSLDRLPSSKPTDE-------PPVSNSLMAAIKRSQANQRRHPESFHLHQ 121
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV------EQAVSLEI 171
I NQQQ +K+EL+ I+SILDDP VSRV EAGF S +K + A
Sbjct: 122 IHNQQQTPSILKVELKYFILSILDDPIVSRVFGEAGFRSCDIKLAIMHPPLTHHASRFPR 181
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFV 231
++ P+ +S+ L S + D + + + E L+ K RN +
Sbjct: 182 SARCPPIFLCNLTDSD---LGHRNFPFPFSGGYGNGD--DDANTRRIGEILVRKTGRNPL 236
Query: 232 VVGECLASIEGVVRGVIDKIEKGDVPEALRDVK--CLPLSISSFRHMN--RVEVEQRVEE 287
++G A + + + +P + ++ C+ IS F N + + + EE
Sbjct: 237 LIGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEE 296
Query: 288 IKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARF 347
I +++ C G GIV+N G+L ++V + + ++ KL N +
Sbjct: 297 IFGMIQQCSGPGIVVNYGEL----------KEVHNGMSFVVSQLTDLLKLY-----NGKV 341
Query: 348 WLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAES 406
WL+G + T++ + + + ++E W LH L I + + S + S
Sbjct: 342 WLIGAVGTYKMHEKFLAKFSAIEKDWDLHLLPITSKPMVDVFGAKSSFMGSFVPFGGFFP 401
Query: 407 GVSWLLFEGEEENKQLTCCADCSAKFEAEARSL---QSSSCNSDSPTSSL---PAWLQQY 460
S + N+ T C C+ KFE E ++ SS+ SSL P +
Sbjct: 402 SQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLHMSPTEIDAK 461
Query: 461 KNEKKATLSNNDKDS---GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFS 517
E + +D+ + V L KKWN IC +H++ + + ++ + S + F+
Sbjct: 462 CKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTMHGVSFESPRFA 520
Query: 518 YDQQ 521
D +
Sbjct: 521 LDHE 524
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 604 LNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
L+ SL NAL +KV WQ I T+L+CR+G +R+ S + + WL F
Sbjct: 678 LDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRS-----SNSRGDIWLTFL 732
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFS-STRADSTEDSRNKRSRDE--QSCSY 720
G D K KI+ LA L+FGS N +S+ S R +S D + DE + +
Sbjct: 733 GPDMMGKRKISFALAELMFGSRENLISVDFGSQDRDRRHNSLFDCQGLNGYDERFRGQTV 792
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++ A + P V L+E+V++AD ++ +AI +G+ + S G + ++ + I +
Sbjct: 793 VDYVAGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFL 849
>gi|224112499|ref|XP_002316210.1| predicted protein [Populus trichocarpa]
gi|222865250|gb|EEF02381.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 233/496 (46%), Gaps = 79/496 (15%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS----HSH 62
T +Q LT EA + +A+ +ARRRGH Q T LH + +L+ + LR AC ++ +S
Sbjct: 7 TARQCLTEEAGHALDEAVNVARRRGHGQTTSLHAVSALLSLPSSPLRDACARARNSAYSS 66
Query: 63 PLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN-- 120
LQ KALELC V+L+R+P S + P +SN+L+AA KR+QA+QRR EN
Sbjct: 67 RLQFKALELCLGVSLDRVPTSQLSD------DSPPVSNSLMAAIKRSQANQRRQP-ENFN 119
Query: 121 -----------QQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
+ +K+EL+ LI+SILDDP VSRV EAGF S+++K + + +
Sbjct: 120 LYHQIQQQQQQSSSSISCIKVELQNLILSILDDPVVSRVFGEAGFRSSEIKLAIVRPL-- 177
Query: 170 EICSQSTPVSSNKSKESNVL---VLSQTASATKVSKP---RVSLDPIR------------ 211
Q SS++ K + +LS + S P V P
Sbjct: 178 ---PQVFKFSSSRFKGPPLFLCNLLSSEDPDSLYSGPGRRGVFSFPFSGGLFLNNNSNNN 234
Query: 212 --NEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEAL--RDVKCLP 267
+ + + E L + RN ++VG +++K ++ +P L V C+
Sbjct: 235 NGDANCRRIGEVLARNKGRNPLLVGLSAYHTLASFSEMVEKRKENVLPVELCGLSVICME 294
Query: 268 LSISSF---RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYY 324
++ F + ++ V+ R EE+ V LG G++ N GDL+ S+ + G
Sbjct: 295 SDVNKFITSENFDKKCVDLRFEELGQFVEKSLGPGLLANFGDLKAF---VSNDDHNNGMD 351
Query: 325 CSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSL 384
++ ++I ++ KL+ G R WL+G A++++Y + PS E W L L I
Sbjct: 352 DAVSYVIEKLTKLLQLYG--GRVWLIGAASYENYSKFVGRFPSTEKDWDLQLLPI----- 404
Query: 385 SLSLITTDSDLQSQSTSKKAESGV-SWLLFEGEEENKQLTCCADCSAKFEAEARSL-QSS 442
+ L++ S ++ S + S++ F G + +D +A + L +
Sbjct: 405 --------TSLRTPSVAESYPSLMESFVPFGG-----FFSTPSDLNAPLNRSCKYLPRFI 451
Query: 443 SCNSDSPTSSLPAWLQ 458
S +D SSLP+W++
Sbjct: 452 SSVADQHQSSLPSWME 467
>gi|224106239|ref|XP_002314097.1| predicted protein [Populus trichocarpa]
gi|222850505|gb|EEE88052.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 250/554 (45%), Gaps = 69/554 (12%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTAC----LQSHSHPL 64
+Q LT EAA + +A+ +ARRR H+Q T LH + +LA L+ AC ++S
Sbjct: 9 RQCLTEEAARALDEAVAVARRRSHSQTTSLHAVSALLALPASTLKNACSRTTTSAYSSRR 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR-------GS 117
Q L+LC V+L+RLP+S + + P ISN+L+AA KR+QA+QRR
Sbjct: 69 QFHVLDLCVGVSLDRLPSSKTLE------EDPPISNSLMAAIKRSQANQRRHPDNFHMHQ 122
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQS-- 175
I QQ +K+E++ I+SILDDP VSRV EAGF S +K + ++ S
Sbjct: 123 IHCNQQAASVLKVEMKHFILSILDDPIVSRVFGEAGFRSCDIKMAIVHPPVIQSSKFSRA 182
Query: 176 --TPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSK--RKRNFV 231
PV SN V + + + D ++ + E L+ + + RN +
Sbjct: 183 GCAPVFLCNLPGSNSTVPGRPPGFSFPFSSGLDDDVGDDDVCRRIGEALVRREGKGRNLL 242
Query: 232 VVGECLASIEGVVRGVIDKIEK----GDVPEALRDVKCLPLSISSFRHM-----NRVEVE 282
+VG ++G +D + K G +P + V + + + ++ ++
Sbjct: 243 LVG---VYASNALKGFVDSVNKDNKGGVLPSEISGVSVISVEDEVIHFVSEGGGDKEKMR 299
Query: 283 QRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC--SIEHIIMEIGKLVCG 340
+ +E+ + C G GIV+N+GDL + E V C ++ +++ ++ L+ G
Sbjct: 300 LKFDELGQELERCSGPGIVVNIGDL-----KVLVGENV----CRDALSYLVSKLTGLLEG 350
Query: 341 IGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTI-----PAGSLSLSLITTDSD 394
E + WL+G A ++ +Y++ +E W L L I P G T S
Sbjct: 351 FRE--KIWLVGAADSYDTYLKSVGRFSGVEKDWDLRILPITSYKSPIGGFG----TKSSL 404
Query: 395 LQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCN---SDSPTS 451
L S S S N+ +T C C+AK+E + ++ ++ +
Sbjct: 405 LGSFVPFGGFFSTPSDFKIPSNSINQSITRCHLCNAKYEQDVAAILKMGPTISVAEQCSE 464
Query: 452 SLPAWLQQYK-NEKKATLSNNDKDSG------VRDLCKKWNSICNSIHKQPYYSERTLTF 504
+LP+ LQ + + +KA KD G + L +W+ IC +H +S+ ++
Sbjct: 465 NLPSSLQMAELDTRKAVDMVKTKDDGTSLNAKILGLQNRWDDICQRLHHAQPFSKFDVS- 523
Query: 505 SSASPSSSTSGFSY 518
+ S ++ GF Y
Sbjct: 524 QATSQAAIAEGFQY 537
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
+ N N S+ AL ++V WQ I+ V +C++G R G S K + F
Sbjct: 659 QFNLRNFKSVMRALSEQVGWQDRATLAISEAVSRCKAGHGRHHG-----SNSKGDISFAF 713
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDE--QSCSY 720
G D K+KIA LA ++FGS +FVS+ L S + ++ + DE +S ++
Sbjct: 714 LGPDRIGKKKIASALAMVMFGSIQSFVSMDLGSHGKVNSSNSMLESQELHDDELGRSTTF 773
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++ A +S PH + +E+V++AD Q A+ +G+ S G EVS I +
Sbjct: 774 VDYIASKLSKKPHSLIFLENVDKADPLVQNSLSYALRTGKFPDSRGREVSTNSTIFV 830
>gi|42571145|ref|NP_973646.1| heat shock-related protein [Arabidopsis thaliana]
gi|330254692|gb|AEC09786.1| heat shock-related protein [Arabidopsis thaliana]
Length = 910
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 196/406 (48%), Gaps = 67/406 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LTAEA+ +++A+ +ARRRGH+Q T LH + +L+ T +LR AC + ++S L
Sbjct: 9 KQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVRNSAYSPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--------- 115
Q KAL+LC +V+L+R+ + G P +SN+L+AA KR+QAHQRR
Sbjct: 69 QFKALDLCLSVSLDRIQSGHQL----GSDDSPPVSNSLMAAIKRSQAHQRRLPENFRIYQ 124
Query: 116 -GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEIC 172
S Q L VK+EL QLI+SILDDP VSRV EAGF S+++K ++ + V L
Sbjct: 125 EMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVPHLLRYS 184
Query: 173 SQSTPVSSN--KSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY-VIENLMSKRK-R 228
SQ N + E N + T + N D+ Y I + +K K R
Sbjct: 185 SQQPLFLCNLTGNPEPNPVRWGFTVPSLNF-----------NGDLDYRRISAVFTKDKGR 233
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN----------- 277
N ++VG S GV+ ++ +EK D LP + +N
Sbjct: 234 NPLLVG---VSAYGVLTSYLNSLEKNQT-----DGMILPTKLHGLTAVNIGSEISDQISV 285
Query: 278 ---RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEI 334
+ + R ++ L G G++L+ GDL R ++ + G + +I+ I
Sbjct: 286 KFDKTYTDTRFHDLGKLAEQGSGPGLLLHYGDL-----RVFTNGE--GNVPAANYIVNRI 338
Query: 335 GKLVCGIGENARFWLMGIATF-QSYMRCKSGHPSLETLWSLHPLTI 379
+L+ G R WL+G T + Y + P++E W L LTI
Sbjct: 339 SELLRRHGR--RVWLIGATTSNEVYEKMMRRFPNVEKDWDLQLLTI 382
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 572 LKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIA 631
LK+ L S S P S SS ++LN+E+ + L V Q D A
Sbjct: 506 LKKHLDSKDFSQPQSVSSYSF------DNPRDLNAESFKIIYRRLTDMVSGQ-----DEA 554
Query: 632 NTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSI 691
V+ C + + K S + + WL G D K +++ LA +V+ S + F+++
Sbjct: 555 ARVISC---ALSQPPK----SVTRRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAV 607
Query: 692 ALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKG 751
L + + +D R + + ++ E + NP V +E++E+AD Q
Sbjct: 608 DLGA-AEQGMGGCDDPMRLRGK-----TMVDHIFEVMCRNPFCVVFLENIEKADEKLQMS 661
Query: 752 FKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
+AIE+G+ + S G EV +G+ I +++ S
Sbjct: 662 LSKAIETGKFMDSHGREVGIGNTIFVMTSSS 692
>gi|18405278|ref|NP_030558.1| heat shock-related protein [Arabidopsis thaliana]
gi|15450731|gb|AAK96637.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|20334718|gb|AAM16220.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|330254691|gb|AEC09785.1| heat shock-related protein [Arabidopsis thaliana]
Length = 491
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 196/406 (48%), Gaps = 67/406 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LTAEA+ +++A+ +ARRRGH+Q T LH + +L+ T +LR AC + ++S L
Sbjct: 9 KQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVRNSAYSPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--------- 115
Q KAL+LC +V+L+R+ + G P +SN+L+AA KR+QAHQRR
Sbjct: 69 QFKALDLCLSVSLDRIQSGHQL----GSDDSPPVSNSLMAAIKRSQAHQRRLPENFRIYQ 124
Query: 116 -GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEIC 172
S Q L VK+EL QLI+SILDDP VSRV EAGF S+++K ++ + V L
Sbjct: 125 EMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVPHLLRYS 184
Query: 173 SQSTPVSSN--KSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY-VIENLMSKRK-R 228
SQ N + E N + T + N D+ Y I + +K K R
Sbjct: 185 SQQPLFLCNLTGNPEPNPVRWGFTVPSLNF-----------NGDLDYRRISAVFTKDKGR 233
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN----------- 277
N ++VG S GV+ ++ +EK D LP + +N
Sbjct: 234 NPLLVG---VSAYGVLTSYLNSLEKNQT-----DGMILPTKLHGLTAVNIGSEISDQISV 285
Query: 278 ---RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEI 334
+ + R ++ L G G++L+ GDL R ++ + G + +I+ I
Sbjct: 286 KFDKTYTDTRFHDLGKLAEQGSGPGLLLHYGDL-----RVFTNGE--GNVPAANYIVNRI 338
Query: 335 GKLVCGIGENARFWLMGIATF-QSYMRCKSGHPSLETLWSLHPLTI 379
+L+ G R WL+G T + Y + P++E W L LTI
Sbjct: 339 SELLRRHGR--RVWLIGATTSNEVYEKMMRRFPNVEKDWDLQLLTI 382
>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
Length = 1258
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 110/175 (62%), Gaps = 17/175 (9%)
Query: 1 MRAGGCTI--QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ 58
MR G +I Q LT E ASV+K+++ +AR + H TPLHV +L + +G L AC++
Sbjct: 16 MRDGQSSIITQLALTPETASVLKESIAMAREKKHLHTTPLHVVAKLLDSPSGFLHQACMK 75
Query: 59 SH--SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
S S+PLQ + LELC NVA+NRLP S S+ P ISN+L AAFKR +A Q
Sbjct: 76 SQPTSYPLQYQGLELCLNVAMNRLPMSISS-------MEPLISNSLKAAFKRIRAQQ--- 125
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
+ +QP K+ELEQLI+SILDDPSVS+VM+ AG+SS + + ++ E+
Sbjct: 126 ---HGRQPPSTDKVELEQLILSILDDPSVSKVMKAAGYSSPDISATFQRGRKYEV 177
>gi|222623004|gb|EEE57136.1| hypothetical protein OsJ_07038 [Oryza sativa Japonica Group]
Length = 663
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 94/115 (81%), Gaps = 11/115 (9%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-----AASTGLLRTA 55
MRAGGCT+QQ LTAEAA+VVKQA++LARRRG+AQVTPLHVA+ ML A + GLLR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CLQSHSHPLQCKALELCFNVALNRLPAST-STPMLG-GHC----QFPTISNALVA 104
CL+SHSHPLQCKALELCFNVALNRLPAS ++P+LG GH P++SNAL A
Sbjct: 61 CLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNALHA 115
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 329 HIIMEIGKLVCGIGENAR-FWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLS 387
H + E+ L CG G WL+G T+Q+ +RC++GHPSLETLW LH L +PAGSL+LS
Sbjct: 114 HAVAEVRALACGGGGGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGLHTLAVPAGSLALS 173
Query: 388 L 388
L
Sbjct: 174 L 174
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 39/190 (20%)
Query: 672 KIAKELARLVFGSHNNFVSIA------------LSSFSSTRADSTEDSRNKR-------- 711
++ ++L LVFGS +FVSI SS + + + + R+KR
Sbjct: 441 RVPRDLPSLVFGSSKSFVSIGGAENASQQPSSSSSSPARSSGFTEQPHRSKRPWAETTTT 500
Query: 712 ---SRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIE--SGRIVTSSG 766
RD+ ++E +AV +NP RV L+E V++AD G + AIE R G
Sbjct: 501 TTSGRDQD---HLEALYDAVRDNPRRVILMERVDRADARCHDGIRDAIERGVVRSRGGGG 557
Query: 767 DEVSLGDAIVILSCESFSSRSRACSPPTKQKS---------DGCEEEKGAAMEGTSPSVS 817
+E LGDAIV+LSCES + S +P K K+ DG + A+ +
Sbjct: 558 EEAFLGDAIVVLSCESLNPSS--TTPAKKAKTEYSVEKLDQDGDDHHGKEAVAAAASPSC 615
Query: 818 LDLNICIDDD 827
DLN+ +DDD
Sbjct: 616 FDLNMSMDDD 625
>gi|395146545|gb|AFN53698.1| fatty acid desaturase 3a [Linum usitatissimum]
Length = 901
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 189/407 (46%), Gaps = 51/407 (12%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH----S 61
T +Q LT EAA + A+ +ARRR H+Q T LH + +LA + LR AC +S
Sbjct: 6 TTARQCLTDEAARALDDAVAVARRRSHSQTTSLHAVSALLALPSSSLRDACFRSRISSSD 65
Query: 62 HP---LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--G 116
+P LQ +ALELC V+L+RLP+S S P ISNAL+AA KR+QA+QRR
Sbjct: 66 YPPPRLQFRALELCVGVSLDRLPSSKS-------ADEPLISNALMAAIKRSQANQRRHPD 118
Query: 117 SIENQQ-----QPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
S QQ Q +K+EL+ I SILDDP VSRV EAGF S Q+KS I
Sbjct: 119 SFHLQQIHFGNQAPAVIKVELKHFIGSILDDPVVSRVFGEAGFISYQIKS--------VI 170
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVM---YVIENLMSK--- 225
S + + + S +L S + S P ++D I +M K
Sbjct: 171 LSPPLLLQTPRFPRSGLLPPSFFSRNLGASDPGFGFGFSFSDDGAENSRRIGEVMVKPEG 230
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHM----NRVEV 281
+ +N +++G C + + + R V + LP I+ + + E
Sbjct: 231 KGKNPLLLGACAS--DALKRFVERVKNNSKGNSSGGGGSSLPSEIAGISVVVIESDEEET 288
Query: 282 EQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI 341
Q+ +++ + +C GRGIV + GDLE + Y S ++E+ K
Sbjct: 289 GQKFDKMGRALEACSGRGIVASFGDLE-VLIGGDDDDTAGSYMVSKLTTLLEMFK----- 342
Query: 342 GENARFWLMG-IATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLS 387
+ WL+G A++ Y + P++E W L L I + S +S
Sbjct: 343 ---EKLWLIGAAASYDVYSKFLKRFPAVEKDWDLQLLPITSSSSPVS 386
>gi|297823931|ref|XP_002879848.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
gi|297325687|gb|EFH56107.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
Length = 908
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 149/503 (29%), Positives = 229/503 (45%), Gaps = 85/503 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ----SHSHPL 64
+Q LTAEAA +++A+ +ARRRGH+Q T LH + +L+ T +LR AC + ++S L
Sbjct: 9 KQCLTAEAAYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVRNSAYSPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--------- 115
Q KAL+LC +V+L+R+ + G P +SN+L+AA KR+QAHQRR
Sbjct: 69 QFKALDLCLSVSLDRIQSGQQL----GSDDSPPVSNSLMAAIKRSQAHQRRLPENFRIYQ 124
Query: 116 -GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEIC 172
S L VK+EL QLI+SILDDP VSRV EAGF S+++K ++ + V L
Sbjct: 125 EMSQSQNSNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVPHLLRYS 184
Query: 173 SQSTPVSSN--KSKESNVLVLSQTASATKVSKPRVSLDPIRN----EDVMYVIENLMSKR 226
SQ N + E N + T P RN D + M ++
Sbjct: 185 SQQPLFLCNVTGNPEPNPVRWGFTV-------------PNRNFNGDSDYRRISAVFMREK 231
Query: 227 KRNFVVVGECLASIEGVVRGVIDKIEKGD-----VPEALRDVKCL----PLSISSFRHMN 277
RN ++VG S GV+ G ++ +EK +P L + + +S +
Sbjct: 232 GRNPLLVG---VSAYGVLTGYLNSLEKNRTDGMILPTKLHGLTAVDIGSEISDQIIVKFD 288
Query: 278 RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKL 337
+ + R ++ L G G++LN GDL R + + G + +I+ + +L
Sbjct: 289 KTYTDTRFHDLGKLAEQGSGPGLILNYGDL-----RVFTDGE--GNVPAANYIVNRVSEL 341
Query: 338 VCGIGENARFWLMGIATFQS-YMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQ 396
+ G R WL+G T Y + P++E W L LTI + L+
Sbjct: 342 LRRHGR--RVWLIGATTSNDVYEKMLRKFPNVEKDWDLQLLTI-------------TSLK 386
Query: 397 SQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSS-SCNSDSPTSSLPA 455
K+ S++ F G T +D F + + S SD S+LP
Sbjct: 387 PCLPHHKSSLIGSFVPFGGFFS----TTPSDLKLPFSGFNKEITGPVSSISDQTQSTLPP 442
Query: 456 WLQQYKNEKKATLSNNDKDSGVR 478
WLQ T ++ ++ SGV+
Sbjct: 443 WLQM------TTRADLNQKSGVK 459
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
+ + WL G D K +++ LA +V+ S + ++++ L + + D +D+ R +
Sbjct: 568 RRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRYMAVDLGA-AEHGMDGCDDAMRLRGK- 625
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ ++ E + NP V +E++E+AD Q +AIE+G+ + S G EV +G+
Sbjct: 626 ----TMVDHIFEVMCRNPFCVVFLENIEKADEKLQISLSKAIETGKFMDSHGREVGIGNT 681
Query: 775 IVILSCES 782
+ +++ S
Sbjct: 682 MFVMTSSS 689
>gi|356551867|ref|XP_003544294.1| PREDICTED: chaperone protein ClpB-like [Glycine max]
Length = 1075
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 235/524 (44%), Gaps = 94/524 (17%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ-------- 58
++Q LT EAA + A+ +ARRR HAQ T LH + +LA + LR AC +
Sbjct: 7 VVRQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRARSGAGAG 66
Query: 59 --------SHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
++S LQ +ALEL V+L+RLP+S ST + P +SN+L+AA KR+Q
Sbjct: 67 TSAARFSAAYSPRLQFRALELSVGVSLDRLPSSKST---SAGEEEPPVSNSLMAAIKRSQ 123
Query: 111 AHQRRGS-----IENQQQPLLA---VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN 162
A+QRR + QQ + +K+EL+ ++SILDDP VSRV EAGF S +K
Sbjct: 124 ANQRRHPESFHMFQQSQQGTASTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLA 183
Query: 163 VEQAVSLEICSQ---STPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPIR-NEDVMYV 218
+ Q + + S PV +LDP + +E++ +
Sbjct: 184 LLQPPLPPVQHRFNWSPPVF------------------------LCNLDPAQPDENIRRI 219
Query: 219 IENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRD---VKCLPLSISSFRH 275
+E L K KRN +++G S ++G ++ + G AL V L I F
Sbjct: 220 MEVLARKNKRNPLLMGVYAKS---ALKGFVEMVRNGRGGSALGSELRVVRLEREIGEFVK 276
Query: 276 MNRVEVEQRVEEIKNLVRSC--LGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIME 333
E+ +K L + C G G+V++ G++E + VR + ++
Sbjct: 277 KGGSGEEKFGVRLKELEQQCEGSGSGVVVSFGEIEVFVGEDVDVDVVRFVVSGLTRLLEI 336
Query: 334 IGKLVCGIGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTD 392
G+ V L+G+A T +Y + P++E W LH LT+ + + S+ + +
Sbjct: 337 RGEKVS---------LLGVAETSHAYSKFLGLFPNVENDWDLHLLTVTSATPSMEGLYSK 387
Query: 393 SDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSS 452
S L S++ F G ++ D S+ + + LQ N D+ S
Sbjct: 388 SSLMG-----------SFVPFGGFFSTPEIRSPVDPSSSYSTSSHWLQ-KVVNMDAHRGS 435
Query: 453 LPAWLQQYK----NEKKATLSNNDKDSGVRDLCKKWNSICNSIH 492
A + + NE+ +L NDK G + KKW+ IC +H
Sbjct: 436 DVAKKELHHPVQTNEENTSL--NDKILGFQ---KKWSDICQRLH 474
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
+ SL L +KV WQ + I+ T+ C+SG +R+G S + + WL F G D
Sbjct: 663 DFKSLDRLLTEKVGWQDQAICAISQTLSLCKSGAGKRRG-----SNGRADIWLAFLGPDR 717
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRA-DSTEDSRNKRSRDE-QSCSYIERFA 725
K KIA LA +FG+ + +S+ L S +S + + R D + + ++ A
Sbjct: 718 LGKRKIASVLAETIFGNPESLISVDLGFQDSFYPLNSVFEYQKSRCYDVLRRKTILDYIA 777
Query: 726 EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+S PH V +E+V++AD Q +A+ +G+ S G +S+ + I +++
Sbjct: 778 GELSKKPHSVVFLENVDKADVLVQNSLLQAVRTGKFSYSHGRVISINNTIFLVT 831
>gi|218194552|gb|EEC76979.1| hypothetical protein OsI_15283 [Oryza sativa Indica Group]
Length = 845
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 94/155 (60%), Gaps = 36/155 (23%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAST----------- 49
MRAG TI Q LTAEAA+V+K A+ +ARRRGHAQVTPLHVA +L+ +
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 50 -GLLRTACLQSHS--------HPLQCKALELCFNVALNRL---------------PASTS 85
GLL+ ACL+SH HPLQC+ALELCFNVALNRL + +
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 86 TPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIE 119
P Q PT+SNALVAA KRAQA+QRRG +E
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVE 155
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 213 EDVMYVIENLMSK--RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSI 270
EDV V+E ++ K R+ N VVVG+ ++ E V ++ ++E GDVP+ L L L +
Sbjct: 171 EDVRAVLEVMVRKQGRRTNPVVVGDSVSMAEAVAGELLLRLEGGDVPDELAGAHLLKLQL 230
Query: 271 S--SFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWA 310
S R M+R +V+ + E++ V + G+V+ +GDL WA
Sbjct: 231 SYVHVRLMSRADVDAKAAELRRSVDAVKRGGLVVYVGDLRWA 272
>gi|357461271|ref|XP_003600917.1| Chaperone protein clpB [Medicago truncatula]
gi|355489965|gb|AES71168.1| Chaperone protein clpB [Medicago truncatula]
Length = 1081
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 204/438 (46%), Gaps = 72/438 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLL-RTACLQS----HSHP 63
+Q LT EA + A+ +A+RRGHAQ T LH + +L+ + + R AC +S +S
Sbjct: 9 RQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRSRNSAYSPR 68
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR-------- 115
LQ KAL+LC +V+L+R P+S + + H P +SN+L+AA KR+QA+QRR
Sbjct: 69 LQFKALDLCLSVSLDRSPSSHNN-VSSDH--EPPVSNSLMAAIKRSQANQRRHPDNFHFY 125
Query: 116 ----GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
Q + +VK+EL+ L++S+LDDP VSRV EAGF S+++K + + + +
Sbjct: 126 HQQQQLQSQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILRPLP-HL 184
Query: 172 CSQSTPVS-SNKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNF 230
+ PV N ++ +D E+ + E L+ + +N
Sbjct: 185 FRRGPPVFLCNLPEQPRRGAGFGFGLGFPFLSGVGDVD----ENFRRIGEILVRSKGKNP 240
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHM---NRVE------V 281
+++G C +R + +EK R LPL + R + +E V
Sbjct: 241 LLLGAC---GNDALRSFTEAVEK-------RREGVLPLELDGLRVICIGKELESGDCEVV 290
Query: 282 EQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI 341
++++I +V C+G G++++ G+L + + + E+GKL+
Sbjct: 291 SLKLKQIAAIVEECVGPGVIVSFGEL-------------KSFVNDDGGFVEELGKLL--K 335
Query: 342 GENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTI-----------PAGSLSLSLI 389
+FWL G A +++SY++ PS+E W L L I P SL S +
Sbjct: 336 IHYDKFWLAGAADSYESYLKFLGRFPSVEKDWDLQILPITSVKASESYQRPRSSLMDSFV 395
Query: 390 TTDSDLQSQSTSKKAESG 407
SQS + +G
Sbjct: 396 PLGGFFSSQSDLRGPLNG 413
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 587 TSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKG 646
+ SS + +Y + + + N L AL K V WQ + + I T++ G+ +
Sbjct: 667 SQSSSCLTFDYYQQADD--ARNPKVLFEALSKAVRWQDEAIRAIIKTIV---CGSTKSA- 720
Query: 647 KFKDHS-EVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE 705
KDH + + W+ F G D K+KIA LA L++GS NF + LSS
Sbjct: 721 --KDHGLNQRGDKWMNFVGPDRHGKKKIAVSLAELLYGSRENFTFVDLSS-------KEM 771
Query: 706 DSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSS 765
+ N + R + S+++ + P V IE+V++AD +Q +AI++G+I S
Sbjct: 772 NGCNVKFRGK---SHLDFLVDECCKKPLSVVFIENVDKADIVAQSSLSQAIKTGKITDSH 828
Query: 766 GDEVSLGDAIVILSCESF 783
G EVS +AI + S +
Sbjct: 829 GREVSANNAIFVFSFSGY 846
>gi|356569296|ref|XP_003552839.1| PREDICTED: uncharacterized protein LOC100786125 [Glycine max]
Length = 942
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 106/166 (63%), Gaps = 19/166 (11%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS----HSHPL 64
+Q LT +AA + +A+++ARRRGHAQ T LH + +L S LLR AC ++ +S L
Sbjct: 9 RQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALL--SLPLLRDACSRARNCAYSPRL 66
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSI------ 118
Q KAL+LC +V+L+R P+S + P ISN+L+AA KR+QA+QRR
Sbjct: 67 QFKALDLCLSVSLDRAPSSHNH---ASSDHDPPISNSLMAAIKRSQANQRRHPDNFHFYP 123
Query: 119 --ENQQQPLL--AVKIELEQLIISILDDPSVSRVMREAGFSSTQVK 160
+ QQQP +VK+EL+ LI+SILDDP VSRV EAGF S+ +K
Sbjct: 124 HHQTQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIK 169
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
+++++N L L K+V WQ + + I T++ + ++ +G + + W+ F
Sbjct: 542 QVDAKNPKILFEVLSKEVTWQDEALRAIIKTIVCSPTKRVKHRGPNQ-----PGDIWMNF 596
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G D K+KIA LA L++GS +F+ + LSS D + R + + +I
Sbjct: 597 VGSDRLGKKKIAVSLAELLYGSRESFIFVDLSSEEMKGCDV-------KFRGKTALDFI- 648
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
P V +E+VE+AD +Q AI++G+I S G EVS+ + + + S
Sbjct: 649 --VGECCKKPLSVVFLENVEKADILAQNSLSLAIKTGKISDSHGREVSVNNTMFVFSFSD 706
Query: 783 FSSRSRACSPPTKQKSDGCEEEKGAAME 810
+ + P+ + KG ++
Sbjct: 707 YQNSLMPRGEPSNYSEERILRAKGGGIK 734
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 27/211 (12%)
Query: 287 EIKNLVRSCLGRGIV--------LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLV 338
E+++L+ S L +V D++ A R + C++
Sbjct: 140 ELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLRPRGPPIFLCNLSEPPRRFPFFF 199
Query: 339 CGIGENARFWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPA----------GSLSLS 387
G+ + + WLMG A ++ +Y+ PS+E W L L I + SL S
Sbjct: 200 GGV-QYDKLWLMGAAASYDNYLNFVGKFPSIEKDWDLQLLPITSVKPLSESYHRPSLMDS 258
Query: 388 LITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCAD-CSAKFEAEARSLQSSSCNS 446
+ SQS K SG + + + C + C + A ++ S+S +
Sbjct: 259 FVPFGGFFSSQSDLKAPLSGSFYCVPHCHQ------CGGERCEHEVLASSKERFSASSAA 312
Query: 447 DSPTSSLPAWLQQYKNEKKATLSNNDKDSGV 477
D S+LP WLQ + L+ KD+GV
Sbjct: 313 DPHQSNLPPWLQIAEFGSTKGLNVKTKDNGV 343
>gi|147815203|emb|CAN74565.1| hypothetical protein VITISV_004969 [Vitis vinifera]
Length = 959
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 210/473 (44%), Gaps = 71/473 (15%)
Query: 211 RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA-LRDVKCLPLS 269
R E V V++ L+ +KRN V+VGE + E V++ ++ +IEK D + L++V+ + L
Sbjct: 59 RAEKVKRVVDILLRTKKRNPVLVGE--SEPEAVMKELLRRIEKRDFGDGPLKNVEVISLH 116
Query: 270 IS-SFRHMNRVEVEQRVEEIKNLVRSCLGRG-IVLNLGDLEW-----AEFRASSSEQVRG 322
S + +R ++ +++E+ LV + +G G I+L+LGDL+W + S V
Sbjct: 117 RELSLNNSDRTQIPTKLKELGRLVEARIGGGSIILDLGDLKWLVEQPVNLGVAGSGTVGQ 176
Query: 323 YYCS--IEHIIMEIGKLVCGIGE--NARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLT 378
S + E+GKL+ GE N R WL+G AT ++Y+R + HPS+E W L +
Sbjct: 177 QVVSEAGRAAVAEMGKLLAMFGEGSNGRLWLIGTATCETYLRFQVYHPSMENDWDLQAVP 236
Query: 379 IPAGSLSLSLIT-------TDSDLQSQSTSKKAESGVSWL---LFEGEEENKQLTCCADC 428
I A + L + S ++S + K + ++ L + E + ++++CC C
Sbjct: 237 IAARTPVPGLFSRFGTNGILSSSVESLTPMKNFPTAITALPRRVSENMDPAQKMSCCPQC 296
Query: 429 SAKFEAEARSLQSSSCNSDSPT-------SSLPAWLQQYK---NEKKATLSNNDKDSGV- 477
+E E L+ S SSLP WL+ K + K T + KD +
Sbjct: 297 MENYEQELGKLEGQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELI 356
Query: 478 -----RDLCKKWNSICNSIHKQPYYSERTLTFSSASPSS-STSGFSYDQQYPNFHKTHRD 531
+DL KKWN C +H P + + L +P++ S SG ++ T
Sbjct: 357 WKQKPQDLLKKWNDTC--LHLHPNFHQHNLNSERITPTALSMSGL--------YNATLLG 406
Query: 532 WAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSD 591
+PK + S+ ++P + P ++ L R N T++
Sbjct: 407 RQAFQPKLQPTRNLGETLQLNSNLVANQPCEQAVTPPGSPVRTDLVLGRTKI-NETTTEK 465
Query: 592 I-----------MEMEYVHKFKELNSENLT--------SLCNALEKKVPWQKD 625
I + E ++KF EL ++ L+ L L +KV WQ+D
Sbjct: 466 IHKEHVIDFFQCISSESLNKFHELQNDKLSPLDADSVKKLLKGLAEKVSWQQD 518
>gi|326513004|dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 230/534 (43%), Gaps = 95/534 (17%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA-STGLLRTACLQS----HSHP 63
+Q L+ A + + A+ ARRR HAQ T LH+ +LA + LLR A ++ +S
Sbjct: 9 RQCLSPAAVTALDAAVVSARRRVHAQTTSLHLVAALLAQQAPPLLRDALARARSAAYSPR 68
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQF-----PTISNALVAAFKRAQAHQRRG-- 116
+Q KALELCF V+L+RLP+++S P +SN+L+AA KR+QA+QRR
Sbjct: 69 VQLKALELCFAVSLDRLPSASSASASTSASGADEQPEPPVSNSLMAAIKRSQANQRRNPD 128
Query: 117 -------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
+ V++EL QL+++ILDDP VSRV +AGF S +K L
Sbjct: 129 TFHFYHQAAFQAATAASQVRVELSQLLLAILDDPVVSRVFDDAGFRSADIK--------L 180
Query: 170 EICSQSTPVS-----SNKSKESNVLVLSQTAS-ATKVSKPRVSLDPIRNEDVMYVIENLM 223
I + P+ +++ + + S A V P S E+ + E L
Sbjct: 181 AILRPAPPMPLLGRLPTRARPPPLFLCSFAAGDDADVPSPAGSAAGAGEENGRRIAEIL- 239
Query: 224 SKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQ 283
R RN ++VG + A + LP+ +S ++Q
Sbjct: 240 -ARGRNPMLVG-------------VGAASAAADFAAASPYRVLPVGPNS--------IDQ 277
Query: 284 RVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSE-QVRGYYCSIEHIIMEIGKLVCGIG 342
+ + S G+V+++GDL E E Q RG ++ E+ + V
Sbjct: 278 TQLSVAAAMASATS-GLVISVGDLR--ELVPDDGELQERG-----RRVVAEVTR-VLETH 328
Query: 343 ENARFWLMGI-ATFQSYMRCKSGHPSLETLWSLH--PLT-IPAGSLSLSLITTDSDLQSQ 398
R W+MG AT+++Y+ S P ++ W L P+T + AG L + TT L
Sbjct: 329 REGRVWVMGWSATYETYLTFLSKFPLVDKDWELQLLPITAVRAGGL-MPPATTPPALSKS 387
Query: 399 STSKKAESGVSWLLFEGEEEN-------KQLTCCADCSAKFEAEARSL-QSSSCNSDSPT 450
++ ++ S L+ + N Q C C+ + E E ++ + S +D
Sbjct: 388 ASLVESFSPFGGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVKGSGITADQ-- 445
Query: 451 SSLPAWLQQYKNEKKATLSNNDKDSGVRD-----------LCKKWNSICNSIHK 493
LP+ LQ N L+N VRD L KKWN C +H+
Sbjct: 446 GGLPSLLQ---NGSMMGLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQ 496
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 26/192 (13%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L L K V Q++ + I +++ C+S T RR+G + K + W F G D+ AK
Sbjct: 719 LVERLFKVVGRQEEALSAICGSIVGCQS-TERRRGASR-----KNDIWFSFHGFDSVAKR 772
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
++A LA LV GS ++F+ + LS +D R + + I+ E +S
Sbjct: 773 RVAVALAELVHGSQDSFIHLDLS---------LQDWGGSSFRGK---TGIDCIVEELSKK 820
Query: 732 PHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACS 791
V ++++++AD Q A+++GR G EV++ D+IVIL S+R CS
Sbjct: 821 RRCVIFLDNIDKADCLVQDSLSHAVDTGRFRDMRGKEVAINDSIVIL-----STRLARCS 875
Query: 792 PPTKQKSDGCEE 803
K S G EE
Sbjct: 876 ---KNASVGVEE 884
>gi|326488024|dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 230/534 (43%), Gaps = 95/534 (17%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA-STGLLRTACLQS----HSHP 63
+Q L+ A + + A+ ARRR HAQ T LH+ +LA + LLR A ++ +S
Sbjct: 9 RQCLSPAAVTALDAAVVSARRRVHAQTTSLHLVAALLAQQAPPLLRDALARARSAAYSPR 68
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQF-----PTISNALVAAFKRAQAHQRRG-- 116
+Q KALELCF V+L+RLP+++S P +SN+L+AA KR+QA+QRR
Sbjct: 69 VQLKALELCFAVSLDRLPSASSASASTSASGADEQPEPPVSNSLMAAIKRSQANQRRNPD 128
Query: 117 -------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
+ V++EL QL+++ILDDP VSRV +AGF S +K L
Sbjct: 129 TFHFYHQAAFQAATAASQVRVELSQLLLAILDDPVVSRVFDDAGFRSADIK--------L 180
Query: 170 EICSQSTPVS-----SNKSKESNVLVLSQTAS-ATKVSKPRVSLDPIRNEDVMYVIENLM 223
I + P+ +++ + + S A V P S E+ + E L
Sbjct: 181 AILRPAPPMPLLGRLPTRARPPPLFLCSFAAGDDADVPSPAGSAAGAGEENGRRIAEIL- 239
Query: 224 SKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQ 283
R RN ++VG + A + LP+ +S ++Q
Sbjct: 240 -ARGRNPMLVG-------------VGAASAAADFAAASPYRVLPVGPNS--------IDQ 277
Query: 284 RVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSE-QVRGYYCSIEHIIMEIGKLVCGIG 342
+ + S G+V+++GDL E E Q RG ++ E+ + V
Sbjct: 278 TQLSVAAAMASATS-GLVISVGDLR--ELVPDDGELQERG-----RRVVAEVTR-VLETH 328
Query: 343 ENARFWLMGI-ATFQSYMRCKSGHPSLETLWSLH--PLT-IPAGSLSLSLITTDSDLQSQ 398
R W+MG AT+++Y+ S P ++ W L P+T + AG L + TT L
Sbjct: 329 REGRVWVMGWSATYETYLTFLSKFPLVDEDWELQLLPITAVRAGGL-MPPATTPPALSKS 387
Query: 399 STSKKAESGVSWLLFEGEEEN-------KQLTCCADCSAKFEAEARSL-QSSSCNSDSPT 450
++ ++ S L+ + N Q C C+ + E E ++ + S +D
Sbjct: 388 ASLVESFSPFGGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVKGSGITADQ-- 445
Query: 451 SSLPAWLQQYKNEKKATLSNNDKDSGVRD-----------LCKKWNSICNSIHK 493
LP+ LQ N L+N VRD L KKWN C +H+
Sbjct: 446 GGLPSLLQ---NGSMMGLNNGLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQ 496
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 26/192 (13%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L L K V Q++ + I +++ C+S T RR+G + K + W F G D+ AK
Sbjct: 719 LVERLFKVVGRQEEALSAICGSIVGCQS-TERRRGASR-----KNDIWFSFHGFDSVAKR 772
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
++A LA LV GS ++F+ + LS +D R + + I+ E +S
Sbjct: 773 RVAVALAELVHGSQDSFIHLDLS---------LQDWGGSSFRGK---TGIDCIVEELSKK 820
Query: 732 PHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACS 791
V ++++++AD Q A+++GR G EV++ D+IVIL S+R CS
Sbjct: 821 RRCVIFLDNIDKADCLVQDSLSHAVDTGRFRDMRGKEVAINDSIVIL-----STRLARCS 875
Query: 792 PPTKQKSDGCEE 803
K S G EE
Sbjct: 876 ---KNASVGVEE 884
>gi|77548259|gb|ABA91056.1| expressed protein [Oryza sativa Japonica Group]
Length = 1131
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 231/534 (43%), Gaps = 86/534 (16%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAST-----GLLRTACLQSHSHP 63
+Q L+ A + A+ +RRR HAQ T LH+ +++LA L A ++S
Sbjct: 9 RQCLSPAAVPALDAAVASSRRRAHAQTTSLHLISSLLAPPAPPLLRDALARARSAAYSPR 68
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS------ 117
+Q KAL+LCF V+L+RLP+ +++ G P +SN+L+AA KR+QA+QRR
Sbjct: 69 VQLKALDLCFAVSLDRLPSVSASSSSSGAADEPPVSNSLMAAIKRSQANQRRNPDTFHFY 128
Query: 118 -IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q AVK+EL L+++ILDDP VSRV EAGF S +K L I +
Sbjct: 129 HQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIK--------LAILRPAP 180
Query: 177 PVS-----SNKSKESNVLVLS-QTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNF 230
P+ +++ + + S A V P +L E+ + E L R RN
Sbjct: 181 PMPLLGRLPTRTRPPPLFLCSFAAADDADVPSPAGNLAGAGEENCRRIAEIL--SRGRNP 238
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKN 290
++VG G A P I H++ +++ +
Sbjct: 239 MLVG------------------VGAASAADDFAAASPYRII---HVDPNTIDRSDLGVAA 277
Query: 291 LVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLM 350
+ S G+++++GDL+ + Q +G ++ E+ +++ + R W+M
Sbjct: 278 AMASATS-GLIISIGDLKQLVPDEDAEAQEKG-----RRVVAEVTRVLETHSKVGRVWVM 331
Query: 351 GI-ATFQSYMRCKSGHPSLETLWSLHPLTIPA-----------GSLSLSLITTDSDLQSQ 398
G AT+++Y+ S P ++ W L L I A + L T S+
Sbjct: 332 GWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPATTVAAFSK 391
Query: 399 STSKKAESGVSW--LLFEGEEEN-------KQLTCCADCSAKFEAEARSLQSSS--CNSD 447
+ +S V + L + EEN Q C C+ K+E E ++ S+S D
Sbjct: 392 PAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAED 451
Query: 448 SPTSSLPAWLQQ-----YKNEKKATLSNNDK---DSGVRDLCKKWNSICNSIHK 493
LP+ LQ N + +D+ +S + +L KKWN C +H+
Sbjct: 452 HHQGGLPSLLQNGSMMGPNNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQ 505
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ + I ++++CRS RR + + WL F G D+
Sbjct: 723 NYKLLVERLFKVVGRQEEALSAICESIVRCRSTESRRGPN-------RNDIWLCFHGSDS 775
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSC---SYIERF 724
AK++IA LA L+ GS +N + + L N + D+ S + I+
Sbjct: 776 MAKKRIAVALAELMHGSKDNLIYLDL---------------NLQDWDDSSFRGKTGIDCI 820
Query: 725 AEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
E +S V ++++++AD Q AI+SGR G V + D+IV+LS
Sbjct: 821 VEQLSKKRQSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLS 875
>gi|449530752|ref|XP_004172357.1| PREDICTED: uncharacterized LOC101204506, partial [Cucumis sativus]
Length = 307
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 18/163 (11%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHS----HPL 64
+Q LT EAA + A+++ARRR HAQ T LH + +L+ + LR AC ++ S L
Sbjct: 9 RQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRARSCAYLPRL 68
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS------- 117
Q +AL+L V+L+RLP+S T P +SN+L+AA KR+QA+QRR
Sbjct: 69 QFRALDLSVGVSLDRLPSSKPT-------DEPPVSNSLMAAIKRSQANQRRHPESFHLHQ 121
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVK 160
I NQQQ +K+EL+ I+SILDD VSRV EAGF S +K
Sbjct: 122 IHNQQQTPSILKVELKYFILSILDDAIVSRVFGEAGFRSCDIK 164
>gi|168026262|ref|XP_001765651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683077|gb|EDQ69490.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1118
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 13/207 (6%)
Query: 604 LNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
++ L L L ++VPWQ V IA TV+KCRSG G F+ + K +TWL
Sbjct: 673 VDDPTLKGLYKGLMQRVPWQAAAVAGIATTVMKCRSGM----GSFRG-ATAKTDTWLLLL 727
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIER 723
G D AK IAK LA +VFG + + I + S R + + R + + ++R
Sbjct: 728 GPDPVAKVAIAKALAEMVFGGERSLLHIGFADGSPARLEGDDSGMRYRGK-----TPLDR 782
Query: 724 FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESF 783
AEAV P V L+ED+++A + RA+E G++ SS EVSL ++I++++
Sbjct: 783 LAEAVRLKPSSVILLEDIDKATSVFKNNVVRAMERGKLADSSMREVSLSNSIIVMTT--- 839
Query: 784 SSRSRACSPPTKQKSDGCEEEKGAAME 810
S S C P + + E K AA++
Sbjct: 840 SVGSVDCEPVERLGALSFSEAKLAALK 866
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 127/244 (52%), Gaps = 22/244 (9%)
Query: 211 RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP--L 268
++EDV+ ++ + R +N ++VG+ A+ V + +I+ G+VP L+ ++ L L
Sbjct: 131 KDEDVLNILNIFLRPRIKNVILVGDITAA-NAVNSDLALRIKNGNVPAQLQGLQILDPLL 189
Query: 269 SISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG--YYCS 326
S SSF + + +E++Q++ E+ +V C+ G +L++GDL+W A + +G +C
Sbjct: 190 SSSSFGYCSSLEMDQKLAELSKIVGECMPAGAILHIGDLQWL---AEPMQLKKGPSNFCP 246
Query: 327 IEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLS- 385
+ E+ +L+ ++R W +G+AT Q++ R + +PSL W L P+ + GS
Sbjct: 247 AQRTASELRQLLIRHA-SSRLWFVGVATPQTFSRLQVLYPSLIADWGLQPVPLSIGSQPD 305
Query: 386 -LSLITTDS----DLQS--QSTSKKAESGVSWLL-----FEGEEENKQLTCCADCSAKFE 433
LS +T + DL S + S ES L+ N++ CC +C AKFE
Sbjct: 306 FLSRLTNCTRVVHDLHSLHSTPSASVESPRVTLMQDTRPVSNSGPNERFQCCVECLAKFE 365
Query: 434 AEAR 437
E R
Sbjct: 366 EERR 369
>gi|225457237|ref|XP_002284179.1| PREDICTED: chaperone protein ClpB1 [Vitis vinifera]
Length = 911
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 38/290 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLHVA ++ G+LR A + + + ++E FN AL +LP+
Sbjct: 17 AHELAMNSGHAQLTPLHVAVALITDPNGILRQAIIGAGGNEEAANSVERVFNKALKKLPS 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P +S L+ +RAQ+ Q+ RG LAV +QLI+ +L+
Sbjct: 77 QSPPP-----DEIP-VSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLLE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
D + +++EAG S+++VKS VE + +E S T + K+ +++
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLV-----EQ 175
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
A K LDP+ R+E++ VI L + K N V++GE VV G+ +I +G
Sbjct: 176 AGK-------LDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVP L +V+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 DVPSNLAEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 278
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q V +A VL+ R+G R + G F
Sbjct: 549 VTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 657 HDEGG-----QLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFT 711
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 712 NTVIIMT 718
>gi|147811710|emb|CAN72669.1| hypothetical protein VITISV_012280 [Vitis vinifera]
Length = 906
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 38/290 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLHVA ++ G+LR A + + + ++E FN AL +LP+
Sbjct: 17 AHELAMNSGHAQLTPLHVAVALITDPNGILRQAIIGAGGNEEAANSVERVFNKALKKLPS 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P +S L+ +RAQ+ Q+ RG LAV +QLI+ +L+
Sbjct: 77 QSPPP-----DEIP-VSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLLE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
D + +++EAG S+++VKS VE + +E S T + K+ +++
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLV-----EQ 175
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
A K LDP+ R+E++ VI L + K N V++GE VV G+ +I +G
Sbjct: 176 AGK-------LDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVP L +V+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 DVPSNLAEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 278
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q V +A VL+ R+G R + G F
Sbjct: 544 VTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSF------ 597
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA +F N V I +S + + S
Sbjct: 598 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 651
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 652 HDEGG-----QLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFT 706
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 707 NTVIIMT 713
>gi|59805048|gb|AAX08108.1| heat shock protein 101 [Vitis vinifera]
Length = 911
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 38/290 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLHVA ++ G+LR A + + + ++E FN AL +LP
Sbjct: 17 AHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAANSVERVFNKALKKLPT 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P +S L+ +RAQ+ Q+ RG LAV +QLI+ +L+
Sbjct: 77 QSPPP-----DEIP-VSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLLE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
D + +++EAG S+++VKS VE + +E S T + K+ +++
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLV-----EQ 175
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
A K LDP+ R+E++ VI L + K N V++GE VV G+ +I +G
Sbjct: 176 AGK-------LDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVP L +V+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 DVPSNLAEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 278
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q V +A VL+ R+G R + G F
Sbjct: 549 VTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 657 HDEGG-----QLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFT 711
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 712 NTVIIMT 718
>gi|254952729|gb|ACT97165.1| heat shock protein [Vitis labrusca x Vitis vinifera]
Length = 911
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 38/290 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLHVA ++ G+LR A + + + ++E FN AL +LP
Sbjct: 17 AHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAANSVERVFNKALKKLPT 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P +S L+ +RAQ+ Q+ RG LAV +QLI+ +L+
Sbjct: 77 QSPPP-----DEIP-VSTTLIKVVRRAQSSQKSRGDTH------LAV----DQLILGLLE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
D + +++EAG S+++VKS VE + +E S T + K+ +++
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLV-----EQ 175
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
A K LDP+ R+E++ VI L + K N V++GE VV G+ +I +G
Sbjct: 176 AGK-------LDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVP L +V+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 DVPSNLAEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 278
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 73/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q V +A VL+ R G R + G F
Sbjct: 549 VTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRVGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 657 HDEGG-----QLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFT 711
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 712 NTVIIMT 718
>gi|125560773|gb|EAZ06221.1| hypothetical protein OsI_28463 [Oryza sativa Indica Group]
Length = 682
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 188/494 (38%), Gaps = 95/494 (19%)
Query: 334 IGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI-------------- 379
+G+L+ G A W + A +Y+RCK HP +E W LH + I
Sbjct: 1 MGRLLRRFG-RAGVWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPIARGGAPIAAAAAGS 59
Query: 380 ---PAGS--LSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENK--QLTCCADCSAKF 432
P GS L+ S+ L+ + A + W G +++ + C C +
Sbjct: 60 ALRPGGSGILNSSMGMLSPALRPMPVTPTA---LRWPP-PGSDQSPAAKPAMCLLCKGSY 115
Query: 433 EAEARSLQSSSCNSDSPTS-------SLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWN 485
E E L++ +D P S LP WLQ ++ KA +L +KW
Sbjct: 116 ERELAKLEAE--QTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELKLKRSKDELERKWR 173
Query: 486 SICNSIHKQ----PYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSW 541
C IH P S TF+ P G + P K + W
Sbjct: 174 ETCARIHSACPMAPALSVPLATFTPRPPVEPKLGVARGAAVPTL-KMNPSW--------- 223
Query: 542 REHHFLFSHEASDKSTSEPSLRLYI-PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHK 600
+K + P+L L P +K L R P + + + + E
Sbjct: 224 ------------EKPSVAPTLELRKSPPASPVKTDLVLCRLD-PGTNPAVENEQKESCEG 270
Query: 601 FKELNS---------ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDH 651
L E+ L L +KV WQ D IA V++CRSG+ +R+ +
Sbjct: 271 LTALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRR-----N 325
Query: 652 SEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR 711
+ + WL F G D K K+ L+ L+ + V+ DSR R
Sbjct: 326 VGTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFG------------GDSRLGR 373
Query: 712 -SRDEQSCSY-----IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSS 765
D + + ++R EAV NP V ++E ++Q D KRA+E+GR+ S
Sbjct: 374 VGNDGPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSR 433
Query: 766 GDEVSLGDAIVILS 779
G EVSLG+ I +L+
Sbjct: 434 GREVSLGNVIFVLT 447
>gi|356519114|ref|XP_003528219.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 764
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 145/287 (50%), Gaps = 33/287 (11%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A +A GHAQ TPLH+A+++++ G+ A L + + +A E N AL +LP+
Sbjct: 17 AHEIATSNGHAQFTPLHLASSLISDKDGIFSQA-LSNAAGEESARAAERVINNALKKLPS 75
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P SNALV A +RAQ Q+ RG LAV +QLI+ +L+
Sbjct: 76 QSPLP-----DEVPA-SNALVKAIRRAQTLQKKRGDTH------LAV----DQLILGLLE 119
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLE--ICSQSTPVSSNKSKESNVLVLSQTASATK 199
D ++ ++ EAG ++++VKS VE+ E +T S+ ++ ++ L + A
Sbjct: 120 DSQIAELLNEAGVAASKVKSEVERLRGKEGKKVESATGDSTFQALKTYGRDLVEQAG--- 176
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R+E++ V+ L + K N V++GE VV G+ +I KGDVP
Sbjct: 177 ------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVP 230
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L DVK + L + + R E E+R++ + V G+ I+
Sbjct: 231 SNLSDVKLIALDMGALVAGAKYRGEFEERLKAVLKEVEDAEGKVILF 277
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q V +A VL+ R+G R + G F
Sbjct: 548 VTRLGQNDKERLIGLADRLHQRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +F N V I +S + + S
Sbjct: 602 ------LFLGPTGVGKTELSKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EA+ P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 656 HEEGG---QLTEAIRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
++I++
Sbjct: 713 VIIMTS 718
>gi|356562609|ref|XP_003549562.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 454
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ TP+H+A+ +++ G+ A + +A+E N AL +LP
Sbjct: 17 AHDLAMSSGHAQFTPIHLAHALISDPNGIFVQAINSAGGGDESARAVERVLNQALKKLPC 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P +N LV A +RAQA Q+ RG LAV +QLI+ IL+
Sbjct: 77 QSPPP-----DEVPASTN-LVKAIRRAQAAQKSRGDTH------LAV----DQLILGILE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVS 201
D + +++EAG ++ +VKS VE+ + + + S ++N L +T V
Sbjct: 121 DSQIGELLKEAGVAAARVKSEVEK-----LRGKEGKKVESASGDTNFQAL-KTYGRDLVE 174
Query: 202 KPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA 259
+ LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GD+P
Sbjct: 175 QAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPSN 233
Query: 260 LRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 234 LADVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEDADGKVILF 278
>gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein [Nicotiana tabacum]
Length = 909
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
GHAQ TPLH+A +++ G+ R A + + + ++E N A+ +LP+ T P
Sbjct: 25 GHAQFTPLHMAVALISDHNGIFRQAIVNAGGNEEVANSVERVLNQAMKKLPSQTPAP--- 81
Query: 91 GHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILDDPSVSRVM 149
+ P S +L+ +RAQ+ Q+ RG LAV +QLI+ +L+D + ++
Sbjct: 82 --DEIPP-STSLIKVLRRAQSSQKSRGDSH------LAV----DQLILGLLEDSQIGDLL 128
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
+EAG S+++VKS VE+ E + + N A K LDP
Sbjct: 129 KEAGVSASRVKSEVEKLRGKEGRKVESASGDTTFQALNTYGRDLVEQAGK-------LDP 181
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L DV+ +
Sbjct: 182 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 241
Query: 268 LSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V G+ I+
Sbjct: 242 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 278
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L ++V Q V +A VL+ R+G R + G F
Sbjct: 549 VSRLGQNEKEKLIGLGDRLHQRVVGQDHAVRAVAEAVLRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA +F + I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDDKLMIRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 657 HDEGG-----QLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQVLDDGRLTDGQGRTVDFT 711
Query: 773 DAIVILS 779
++++I++
Sbjct: 712 NSVIIMT 718
>gi|297611031|ref|NP_001065527.2| Os11g0104300 [Oryza sativa Japonica Group]
gi|255679687|dbj|BAF27372.2| Os11g0104300 [Oryza sativa Japonica Group]
Length = 435
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 179/392 (45%), Gaps = 56/392 (14%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGL-----LRTACLQSHSHP 63
+Q L+ A + A+ +RRR HAQ T LH+ +++LA L A ++S
Sbjct: 9 RQCLSPAAVPALDAAVASSRRRAHAQTTSLHLISSLLAPPAPPLLRDALARARSAAYSPR 68
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS------ 117
+Q KAL+LCF V+L+RLP+ +++ G P +SN+L+AA KR+QA+QRR
Sbjct: 69 VQLKALDLCFAVSLDRLPSVSASSSSSGAADEPPVSNSLMAAIKRSQANQRRNPDTFHFY 128
Query: 118 -IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q AVK+EL L+++ILDDP VSRV EAGF S +K L I +
Sbjct: 129 HQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIK--------LAILRPAP 180
Query: 177 PVS-----SNKSKESNVLVLS-QTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNF 230
P+ +++ + + S A V P +L E+ + E L R RN
Sbjct: 181 PMPLLGRLPTRTRPPPLFLCSFAAADDADVPSPAGNLAGAGEENCRRIAEIL--SRGRNP 238
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKN 290
++VG G A P I H++ +++ +
Sbjct: 239 MLVG------------------VGAASAADDFAAASPYRII---HVDPNTIDRSDLGVAA 277
Query: 291 LVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLM 350
+ S G+++++GDL+ + Q +G ++ E+ +++ + R W+M
Sbjct: 278 AMASATS-GLIISIGDLKQLVPDEDAEAQEKG-----RRVVAEVTRVLETHSKVGRVWVM 331
Query: 351 GI-ATFQSYMRCKSGHPSLETLWSLHPLTIPA 381
G AT+++Y+ S P ++ W L L I A
Sbjct: 332 GWSATYETYLAFLSKFPLVDKDWDLQLLPITA 363
>gi|351725607|ref|NP_001238122.1| heat shock protein [Glycine max]
gi|530207|gb|AAA66338.1| heat shock protein [Glycine max]
Length = 911
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TP+H+A+ +++ G+ A + +A+E N AL +LP
Sbjct: 17 AHELAMSSGHAQLTPIHLAHALISDPNGIFVLAINSAGGGEESARAVERVLNQALKKLPC 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P +N LV A +RAQA Q+ RG ++ ++QLI+ IL+
Sbjct: 77 QSPPP-----DEVPASTN-LVRAIRRAQAAQKSRGD----------TRLAVDQLILGILE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVS 201
D + +++EAG + +V+S V++ + + + S ++N L +T V
Sbjct: 121 DSQIGDLLKEAGVAVAKVESEVDK-----LRGKEGKKVESASGDTNFQAL-KTYGRDLVE 174
Query: 202 KPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA 259
+ LDP+ R+E++ V+ L + K N V+VGE VV G+ +I +GDVP
Sbjct: 175 QAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLVGEPGVGKTAVVEGLAQRIVRGDVPSN 233
Query: 260 LRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 234 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 278
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L +V Q V +A VL+ R+G R + G F
Sbjct: 549 VTRLGQNEKERLIGLGDRLHSRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDNENQLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 657 HEEGG---QLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNT 713
Query: 775 IVILS 779
++I++
Sbjct: 714 VIIMT 718
>gi|357132932|ref|XP_003568082.1| PREDICTED: chaperone protein ClpB1-like [Brachypodium distachyon]
Length = 912
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 141/278 (50%), Gaps = 29/278 (10%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A ++ +G+LR A Q S P + E + AL +LP+ + P
Sbjct: 25 GHAQITPLHLAASLAGDKSGILRQAIAQASGGDPAAGDSFERVLSGALKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D +S
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQISDC 128
Query: 149 MREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLD 208
++EAG S+++V++ +E+ S V S S ++N L +T V + LD
Sbjct: 129 LKEAGVSASRVRAELEKLRG----GDSRKVES-ASGDTNFQAL-KTYGRDLVEQAG-KLD 181
Query: 209 PI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
P+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L DV+ +
Sbjct: 182 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRLI 241
Query: 267 PLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V G+ I+
Sbjct: 242 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L + + L +V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|356541735|ref|XP_003539329.1| PREDICTED: uncharacterized protein LOC100805591 [Glycine max]
Length = 825
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
+ SL + L +KV WQ + +Y I TV +CRSG GK S V+ + WL F G D
Sbjct: 410 DFKSLYHLLTEKVGWQDEAIYAINRTVSRCRSGA----GKLSSGSHVRADIWLAFLGPDR 465
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRAD-STEDSRNKRSRDE-QSCSYIERFA 725
K KIA LA ++FG+ + +++ LSS S + +N D + ++ A
Sbjct: 466 LGKRKIASALAEILFGNKQSLITVDLSSQDRCYPSYSIFEFQNSYCHDVLMRKTVLDYIA 525
Query: 726 EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSS 785
+S PH V +E+V+QAD+ Q AI++G+ S G E+S+ +A+ I++ F S
Sbjct: 526 GELSKKPHSVVFLENVDQADFLVQNSLFHAIKTGKFPYSHGREISINNAMFIVTSSVFKS 585
>gi|449439307|ref|XP_004137427.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
gi|449486952|ref|XP_004157452.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 908
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 140/290 (48%), Gaps = 39/290 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLH+A +++ +G+L A S K +E F AL +LP+
Sbjct: 17 AHELALNSGHAQLTPLHLAVALVSDPSGILSQAIASSGGENAH-KEVETVFKRALKKLPS 75
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P S L+ +RAQA Q+ RG LAV +QL++ +L+
Sbjct: 76 QSPAP-----DEVPA-STTLIKVIRRAQAAQKSRGDTH------LAV----DQLVLGLLE 119
Query: 142 DPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
D + +++EAG ++ +VKS VE + +E S T + K+ + L + A
Sbjct: 120 DSQIGDLLKEAGVTTAKVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRD---LVEQAG 176
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +G
Sbjct: 177 ---------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 227
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 228 DVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEDAEGKVILF 277
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L K+V Q V +A VL+ R+G R + G F
Sbjct: 548 VTRLGQNDKERLVGLADRLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQPTGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N V I +S + + S
Sbjct: 602 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 656 HEEGG---QLTEAVRRRPYSVILFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILS 779
++I++
Sbjct: 713 VIIMT 717
>gi|115486876|ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group]
gi|108862072|gb|ABA95594.2| expressed protein [Oryza sativa Japonica Group]
gi|113648432|dbj|BAF28944.1| Os12g0104300 [Oryza sativa Japonica Group]
Length = 1129
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 208/479 (43%), Gaps = 82/479 (17%)
Query: 59 SHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS- 117
++S +Q KAL+LCF V+L+RLP+ +++ G + P +SN+L+AA KR+QA+QRR
Sbjct: 64 AYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADE-PPVSNSLMAAIKRSQANQRRNPD 122
Query: 118 ------IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
Q AVK+EL L+++ILDDP VSRV EAGF S +K L I
Sbjct: 123 TFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIK--------LAI 174
Query: 172 CSQSTPVS-----SNKSKESNVLVLS-QTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
+ P+ +++ + + S A V P +L E+ + E L
Sbjct: 175 LRPAPPMPLLGRLPTRTRPPPLFLCSFAAADDADVPSPAGNLAGAGEENCRRIAEIL--S 232
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
R RN ++VG G A P I H++ +++
Sbjct: 233 RGRNPMLVG------------------VGAASAADDFAAASPYRII---HVDPNTIDRSD 271
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENA 345
+ + S G+++++GDL+ + Q G ++ E+ +++ +
Sbjct: 272 LGVAAAMASATS-GLIISIGDLKQLVPDEDAEAQENG-----RRVVAEVTRVLEAHSKVG 325
Query: 346 RFWLMGI-ATFQSYMRCKSGHPSLETLWSLH--PLTIPAGSLSLSLITTDSDLQSQST-- 400
R W+MG AT+++Y+ S P ++ W L P+T + + + L +T
Sbjct: 326 RVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTV 385
Query: 401 ---SKKAESGV-SWLLFEG-----EEEN-------KQLTCCADCSAKFEAEARSLQSSS- 443
SK A S + S++ F G EEN Q C C+ K+E E ++ S+S
Sbjct: 386 AAFSKPAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASG 445
Query: 444 -CNSDSPTSSLPAWLQQ-----YKNEKKATLSNNDK---DSGVRDLCKKWNSICNSIHK 493
D LP+ LQ N +D+ +S + +L KKWN C +H+
Sbjct: 446 ITAEDHHQGGLPSLLQNGSMMGPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQ 504
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ V I ++++CRS RR + + WL F G D+
Sbjct: 722 NYKLLVERLFKVVGRQEEAVSAICESIVRCRSTESRR-------GPSRNDIWLCFHGSDS 774
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK++IA LA L+ GS N + + L+ +D + R + I+ E
Sbjct: 775 MAKKRIAVALAELMHGSKENLIYLDLN---------LQDWDDSSFRGKTG---IDCIVEQ 822
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+S V ++++++AD Q AI+SGR G V + D+IV+LS
Sbjct: 823 LSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLS 874
>gi|326511825|dbj|BAJ92057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 914
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLP 81
A +A GHAQ+TPLH+A + A +G+LR A S + ++ E + AL RLP
Sbjct: 17 AHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAAVESFERVASTALKRLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S +LV A +RAQ+ Q+ RG LAV +QLI+ +L
Sbjct: 77 SQSPPP-----DTVPA-STSLVKAVRRAQSAQKSRGDSH------LAV----DQLIVGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTA 195
+DP +S ++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 121 EDPQISDALKEAGASAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG-- 178
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +
Sbjct: 179 ----------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L L + L ++V Q + V + VL+ R+G R + G F F G
Sbjct: 561 LIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPTGSF------------LFLGP 608
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V I +S + S R Q
Sbjct: 609 TGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQ----- 663
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E V P+ V L ++VE+A + ++ GR+ G V + ++I++
Sbjct: 664 --LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 720
>gi|537446|gb|AAA67927.1| AtHSP101 [Arabidopsis thaliana]
Length = 911
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 29/288 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A LA GHAQ TPLH+A +++ TG+ A + S ++ E N AL +
Sbjct: 14 IATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQA-ISSAGGENAAQSAERVINQALKK 72
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIIS 138
LP+ + P P S++L+ +RAQA Q+ RG LAV +QLI+
Sbjct: 73 LPSQSPPP-----DDIPA-SSSLIKVIRRAQAAQKSRGDTH------LAV----DQLIMG 116
Query: 139 ILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
+L+D + ++ E G ++ +VKS VE+ + + + S ++N L +T
Sbjct: 117 LLEDSQIRDLLNEVGVATARVKSEVEK-----LRGKEGKKVESASGDTNFQAL-KTYGRD 170
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
V + LDP+ R+E++ V+ L + K N V++GE VV G+ +I KGDV
Sbjct: 171 LVEQAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDV 229
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
P +L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 230 PNSLTDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILF 277
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L K+V Q V ++ +L+ R+G R + G F
Sbjct: 549 VTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRAQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V ++
Sbjct: 657 HEEGG---QLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNS 713
Query: 775 IVILS 779
++I++
Sbjct: 714 VIIMT 718
>gi|6013196|gb|AAF01280.1|AF174433_1 heat shock protein 101 [Triticum aestivum]
Length = 913
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLP 81
A +A GHAQ+TPLH+A + A +G+LR A S + ++ E + AL RLP
Sbjct: 17 AHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAAAESFERVASAALKRLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S +LV A +RAQ+ Q+ RG LAV +QL++ +L
Sbjct: 77 SQSPPP-----DTVPA-STSLVKAVRRAQSAQKSRGDSH------LAV----DQLLMGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTA 195
+DP +S ++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 121 EDPQISDALKEAGISAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG-- 178
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +
Sbjct: 179 ----------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L L + L ++V Q + V + VL+ R+G R + G F F G
Sbjct: 561 LIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPTGSF------------LFLGP 608
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V I +S + S R Q
Sbjct: 609 TGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQ----- 663
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E V P+ V L ++VE+A + ++ GR+ G V + ++I++
Sbjct: 664 --LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 720
>gi|224130056|ref|XP_002328643.1| predicted protein [Populus trichocarpa]
gi|222838819|gb|EEE77170.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 28/285 (9%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLH+A +++ +G+LR A + +A E FN L +LP+
Sbjct: 17 AHELAVGAGHAQITPLHLAVALISDPSGILRQAVANAGDGENTAQAAERVFNQVLKKLPS 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ + S +L+ +R+QA Q+ RG LAV +Q+I+ +L+
Sbjct: 77 QSPP------PEEVPPSTSLIKVIRRSQALQKSRGD------SYLAV----DQMILGLLE 120
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVS 201
D + +++E G S++ VKS VE+ + + N S ++N L +
Sbjct: 121 DSQIRDLLKEVGVSASTVKSEVEK-----LRGKEGKKVENASGDTNFQALK--TYGRDLV 173
Query: 202 KPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA 259
+ LDP+ R+E++ V+ L + K N V++GE V G+ +I +GDVP
Sbjct: 174 EGAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVAEGLAQRIVRGDVPSN 233
Query: 260 LRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 234 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 278
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L +V Q V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNEKERLIGLADRLHHRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + N V I +S + + S
Sbjct: 604 ------LFLGPTGVGKTELAKTLAEQLFDNENQLVRIDMSEYMEQHSVSRLIGAPPGYVG 657
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 658 HEEGG---QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 714
Query: 775 IVILS 779
++I++
Sbjct: 715 VIIMT 719
>gi|110623257|emb|CAI94867.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 143/291 (49%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLP 81
A +A GHAQ+TPLH+A + A +G+LR A S + ++ E AL RLP
Sbjct: 17 AHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAAAESFERVATAALKRLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S +LV A +RAQ+ Q+ RG LAV +QL++ +L
Sbjct: 77 SQSPPP-----DTVPA-STSLVKAVRRAQSAQKSRGDSH------LAV----DQLLMGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTA 195
+DP +S ++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 121 EDPQISDALKEAGISAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG-- 178
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +
Sbjct: 179 ----------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L L + L ++V Q + V + VL+ R+G R + G F F G
Sbjct: 561 LIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPTGSF------------LFLGP 608
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V I +S + S R Q
Sbjct: 609 TGVGKTELAKALAEQLFDHENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQ----- 663
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E V P+ V L ++VE+A + ++ GR+ G V + ++I++
Sbjct: 664 --LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 720
>gi|326515338|dbj|BAK03582.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLP 81
A +A GHAQ+TPLH+A + A +G+LR A S + ++ E + AL RLP
Sbjct: 17 AHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAAVESFERVASTALKRLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S +LV A +RAQ+ Q+ RG LAV +QLI+ +L
Sbjct: 77 SQSPPP-----DTVPA-STSLVKAVRRAQSAQKSRGDSH------LAV----DQLIVGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTA 195
+DP +S ++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 121 EDPQISDALKEAGASAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG-- 178
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +
Sbjct: 179 ----------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L L + L ++V Q + V + VL+ R+G R + G F F G
Sbjct: 561 LIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPTGSF------------LFLGP 608
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V I +S + S R Q
Sbjct: 609 TGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQ----- 663
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E V P+ V L ++VE+A + ++ GR+ G V + ++I++
Sbjct: 664 --LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 720
>gi|218186254|gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indica Group]
Length = 1129
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 208/479 (43%), Gaps = 82/479 (17%)
Query: 59 SHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS- 117
++S +Q KAL+LCF V+L+RLP+ +++ G + P +SN+L+AA KR+QA+QRR
Sbjct: 64 AYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADE-PPVSNSLMAAIKRSQANQRRNPD 122
Query: 118 ------IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEI 171
Q AVK+EL L+++ILDDP VSRV EAGF S +K L I
Sbjct: 123 TFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIK--------LAI 174
Query: 172 CSQSTPVS-----SNKSKESNVLVLS-QTASATKVSKPRVSLDPIRNEDVMYVIENLMSK 225
+ P+ +++ + + S A V P +L E+ + E L
Sbjct: 175 LRPAPPMPLLGRLPTRTRPPPLFLCSFAAADDADVPSPAGNLAGAGEENCRRIAEIL--S 232
Query: 226 RKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRV 285
R RN ++VG G A P I H++ +++
Sbjct: 233 RGRNPMLVG------------------VGAASAADDFAAASPYRII---HVDPNTIDRSD 271
Query: 286 EEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENA 345
+ + S G+++++GDL+ + Q G ++ E+ +++ +
Sbjct: 272 LGVAAAMASATS-GLIISIGDLKQLVPDEDAEAQENG-----RRVVAEVTRVLETHSKVG 325
Query: 346 RFWLMGI-ATFQSYMRCKSGHPSLETLWSLH--PLTIPAGSLSLSLITTDSDLQSQST-- 400
R W+MG AT+++Y+ S P ++ W L P+T + + + L +T
Sbjct: 326 RVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTV 385
Query: 401 ---SKKAESGV-SWLLFEG-----EEEN-------KQLTCCADCSAKFEAEARSLQSSS- 443
SK A S + S++ F G EEN Q C C+ K+E E ++ S+S
Sbjct: 386 AAFSKPAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASG 445
Query: 444 -CNSDSPTSSLPAWLQQ-----YKNEKKATLSNNDK---DSGVRDLCKKWNSICNSIHK 493
D LP+ LQ N +D+ +S + +L KKWN C +H+
Sbjct: 446 ITAEDHHQGGLPSLLQNGSMMGPNNGFDPVKVRDDRMVLNSKILNLRKKWNEYCLRLHQ 504
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ + I ++++CRS RR + + WL F G D+
Sbjct: 722 NYKLLVERLFKVVGRQEEAMSAICESIVRCRSTESRR-------GPSRNDIWLCFHGSDS 774
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK++IA LA L+ GS N + + L+ +D + R + I+ E
Sbjct: 775 MAKKRIAVALAELMHGSKENLIYLDLN---------LQDWDDSSFRGKTG---IDCIVEQ 822
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+S V ++++++AD Q AI+SGR G V + D+IV+LS
Sbjct: 823 LSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLS 874
>gi|18410584|ref|NP_565083.1| heat shock protein 101 [Arabidopsis thaliana]
gi|21264430|sp|P42730.2|CLPB1_ARATH RecName: Full=Chaperone protein ClpB1; AltName: Full=ATP-dependent
Clp protease ATP-binding subunit ClpB homolog 1;
AltName: Full=Casein lytic proteinase B1; AltName:
Full=Heat shock protein 101
gi|6715468|gb|AAF26423.1|AF218796_1 heat shock protein 101 [Arabidopsis thaliana]
gi|12324908|gb|AAG52410.1|AC020579_12 heat shock protein 101; 13093-16240 [Arabidopsis thaliana]
gi|332197455|gb|AEE35576.1| heat shock protein 101 [Arabidopsis thaliana]
Length = 911
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 29/288 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A LA GHAQ TPLH+A +++ TG+ A + S ++ E N AL +
Sbjct: 14 IATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQA-ISSAGGENAAQSAERVINQALKK 72
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIIS 138
LP+ + P P S++L+ +RAQA Q+ RG LAV +QLI+
Sbjct: 73 LPSQSPPP-----DDIPA-SSSLIKVIRRAQAAQKSRGDTH------LAV----DQLIMG 116
Query: 139 ILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
+L+D + ++ E G ++ +VKS VE+ + + + S ++N L +T
Sbjct: 117 LLEDSQIRDLLNEVGVATARVKSEVEK-----LRGKEGKKVESASGDTNFQAL-KTYGRD 170
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
V + LDP+ R+E++ V+ L + K N V++GE VV G+ +I KGDV
Sbjct: 171 LVEQAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDV 229
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
P +L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 230 PNSLTDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILF 277
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L K+V Q V ++ +L+ R+G R + G F
Sbjct: 549 VTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V ++
Sbjct: 657 HEEGG---QLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNS 713
Query: 775 IVILS 779
++I++
Sbjct: 714 VIIMT 718
>gi|297842179|ref|XP_002888971.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata]
gi|297334812|gb|EFH65230.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata]
Length = 911
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 29/296 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + A LA GHAQ TPLH+A +++ TG+ A + S ++ E
Sbjct: 6 FTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQA-ISSAGGENAAQSAER 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKI 130
N AL +LP+ + P P S++L+ +RAQA Q+ RG LAV
Sbjct: 65 VINQALKKLPSQSPPP-----DDIPA-SSSLIKVIRRAQAAQKSRGDSH------LAV-- 110
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+QLI+ +L+D + ++ E G ++ +VKS VE+ + + + S ++N
Sbjct: 111 --DQLIMGLLEDSQIRDLLNEVGVATARVKSEVEK-----LRGKEGKKVESASGDTNFQA 163
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L +T V + LDP+ R+E++ V+ L + K N V++GE VV G+
Sbjct: 164 L-KTYGRDLVEQAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I KGDVP +L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 222 QRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 277
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L K+V Q V ++ +L+ R+G R + G F
Sbjct: 549 VTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V ++
Sbjct: 657 HEEGG---QLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNS 713
Query: 775 IVILS 779
++I++
Sbjct: 714 VIIMT 718
>gi|17065040|gb|AAL32674.1| heat shock protein 101 [Arabidopsis thaliana]
Length = 460
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 29/296 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + A LA GHAQ TPLH+A +++ TG+ A + S ++ E
Sbjct: 6 FTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQA-ISSAGGENAAQSAER 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKI 130
N AL +LP+ + P P S++L+ +RAQA Q+ RG LAV
Sbjct: 65 VINQALKKLPSQSPPP-----DDIPA-SSSLIKVIRRAQAAQKSRGDTH------LAV-- 110
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+QLI+ +L+D + ++ E G ++ +VKS E+ + + + S ++N
Sbjct: 111 --DQLIMGLLEDSQIRDLLNEVGVATARVKSEFEK-----LRGKEGKKVESASGDTNFQA 163
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L +T V + LDP+ R+E++ V+ L + K N V++GE VV G+
Sbjct: 164 L-KTYGRDLVEQAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I KGDVP +L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 222 QRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILF 277
>gi|224142299|ref|XP_002324496.1| predicted protein [Populus trichocarpa]
gi|222865930|gb|EEF03061.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 16/187 (8%)
Query: 594 EMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE 653
E+ V +L++++ L L +KV WQ+D +A TV +C+ G GK + +
Sbjct: 141 ELHSVKLLSKLDADSFKKLLKGLLEKVWWQRDAASAVATTVTQCKLG----HGKGRS-TG 195
Query: 654 VKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR 713
K + WL F G D K+K+A L+ LV G+ N + + L S+ ED ++ S
Sbjct: 196 SKGDIWLLFTGPDRAGKKKMASALSELVCGA--NPIMVCLGSWR-------EDGESEVSF 246
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
+ + ++R AEAV NP V ++ED+++AD + KRA+E GRI S G E+SLG+
Sbjct: 247 --RGKTVLDRIAEAVRRNPFSVIILEDIDEADMLVRGSIKRAMERGRIADSLGREISLGN 304
Query: 774 AIVILSC 780
I IL+
Sbjct: 305 VIFILTA 311
>gi|82408817|gb|ABB73202.1| heat shock protein 101 [Funaria hygrometrica]
Length = 908
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 27/281 (9%)
Query: 26 LARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTS 85
LA GHAQ TP+H+A +L S GLLR A + ++E L ++P+
Sbjct: 20 LATEAGHAQYTPVHLALALLNDSEGLLRQAIASASGGDQTLNSVERVLKNTLKKIPSQNP 79
Query: 86 TPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSV 145
P +NAL+ K+AQ+ Q+ S + LAV +QLI+++L+D +
Sbjct: 80 AP------DASPANNALIKCIKKAQSLQKSRSDSH-----LAV----DQLILALLEDSQI 124
Query: 146 SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV 205
+ +EAG S+T+VK LE +S+ N + +SN L + + +
Sbjct: 125 ADCFKEAGVSATRVKR------ELEAVRRSSKKVDNANADSNFQALKKYGR--DLVEDAA 176
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
LDP+ R++++ V+ L + K N V++GE VV G+ +I +GD P L +V
Sbjct: 177 KLDPVIGRDDEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDAPSNLLEV 236
Query: 264 KCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 RLVALDMGALVAGAKYRGEFEERLKAVLKEVEDSDGKVILF 277
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L + + L ++V Q + V +A +L+ R+G R++ G F F G
Sbjct: 560 LLAFADRLHERVVGQDEAVQAVAEAILRSRAGLGRQQQPTGSF------------LFLGP 607
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V + +S + S +R + Q
Sbjct: 608 TGVGKTELAKALAEQLFDKENQLVRMDMSEYMEQHSVSRLIGSPPGYVGHEEGGQ----- 662
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
EAV P+ V L ++VE+A + ++ GR+ G V + +VI++
Sbjct: 663 --LTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQLLDDGRLTDGQGRTVDFTNTVVIMT 718
>gi|413915851|gb|AFW55783.1| hypothetical protein ZEAMMB73_843327 [Zea mays]
Length = 1120
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 102/167 (61%), Gaps = 19/167 (11%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG-LLRTACLQS----HSHP 63
+Q L+ A + + A+ ARRR HAQ T LH+ ++LA + LLR A ++ +S
Sbjct: 9 RQCLSPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARARSAAYSPR 68
Query: 64 LQCKALELCFNVALNRLPA---STSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS--- 117
LQ KAL+LCF V+L+RLP+ S STP P ++N+L+AA KR+QA+QRR
Sbjct: 69 LQLKALDLCFAVSLDRLPSTPTSASTPT----SHEPPVANSLMAAIKRSQANQRRNPDTF 124
Query: 118 --IENQQQPLL--AVKIELEQLIISILDDPSVSRVMREAGFSSTQVK 160
+Q P A+K++L L+++ILDDP VSRV +AGF S ++K
Sbjct: 125 HFYHHQAAPTSPNAIKVDLSHLVLAILDDPLVSRVFADAGFRSNEIK 171
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ + I ++++CRS RR+G K K + W F G D+
Sbjct: 714 NYKLLMEHLFKVVGRQEEALSAICASIVRCRS-MERRRGANK-----KNDIWFSFYGPDS 767
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK ++ LA L+ GS N + + L S R KR+ D C + E
Sbjct: 768 IAKRRVGVALAELMHGSSGNLIYLDL----SLNDWGNPSFRGKRATD---CIF-----EE 815
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS-LGDAIVILS 779
+ V ++++++AD Q+ A+E+GR G V+ L D+IV+LS
Sbjct: 816 LRKKRRSVIFLDNIDKADCLVQESLIHAMETGRYKDLHGGRVTDLNDSIVVLS 868
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 299 GIVLNLGDL-EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENAR----FWLMGI- 352
G++ ++GDL + A + R ++ E+ +L+ AR W+MG
Sbjct: 281 GLIFSIGDLKDLVPDEADLQDAAR-------RVVAEVTRLLETHRPAARQTQTVWVMGWS 333
Query: 353 ATFQSYMRCKSGHPSLETLWSLHPLTIPA----------GSLSLSLITTDSDLQSQSTSK 402
AT+++Y+ S P ++ W L L I A + TT + L +T+
Sbjct: 334 ATYETYLAFLSKFPLVDKDWELQLLPITAVRDAGPAAGLVPPPPAPATTVAALSMPATTS 393
Query: 403 KAESGVSW--LLFEGEEENKQLT--C-----CADCSAKFEAEARS-LQSSSCNSDSPTSS 452
AES V + LL + E N T C C C+ ++E E S ++ S +D+
Sbjct: 394 FAESFVPFGGLLCDTYEANSLTTNFCPQALRCQHCNDRYEQEVASIIRGSGVTADAHQEG 453
Query: 453 LPAWLQQ-----YKNEKKATLSNNDK---DSGVRDLCKKWNSICNSIHK 493
LP+ LQ NE A +D+ + + +L KKWN C +H+
Sbjct: 454 LPSLLQNGGMMGSNNEFDAVKVRDDQMVLSTKILNLEKKWNEYCVRLHQ 502
>gi|297721177|ref|NP_001172951.1| Os02g0464900 [Oryza sativa Japonica Group]
gi|255670883|dbj|BAH91680.1| Os02g0464900 [Oryza sativa Japonica Group]
Length = 550
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 36/314 (11%)
Query: 211 RNEDVMYVIENLMSKR--KRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPL 268
+ EDV ++E ++ K+ + N VVVG+ ++ E V ++ ++E GDVP LR L L
Sbjct: 50 KEEDVRAILEVMVRKQWARPNPVVVGDSVSVAEASVAELMRRLETGDVPGELRGAHVLRL 109
Query: 269 SIS--SFRHMNRVEVEQRVEEIKNLVRSCL----GRGIVLNLGDLEWA--EFRASSSEQV 320
+S R M R +V+ +V E++ S + G+V+ +GD+ WA + +
Sbjct: 110 HLSRVHLRLMTRADVDAQVAELRRTANSIVVDAKAAGLVIYVGDVRWAVDDDDHHHHHAL 169
Query: 321 RGYYCSIEHIIMEIGKLVCGI--GENARFWLMGIATFQSYMRCKSGH-----PSLETLWS 373
Y +H++ E+ +L+ + R WL+ A++Q+Y+RC+ PSLE WS
Sbjct: 170 AEYSAPEDHMVAELARLMSELRAASRGRAWLVAAASYQTYVRCQQRRRRRRAPSLEATWS 229
Query: 374 LHPLTIP-------AGSLSLS----LITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQL 422
L + +P LSL + +K E L G++
Sbjct: 230 LQAVVVPAGAGADAGTGLSLGRRAPPAPPPRVAEDDQIAKLGEIPTLDLALGGDDGGVP- 288
Query: 423 TCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCK 482
CA+C+ +E EA +++ + + + P W + NE + + + + +L +
Sbjct: 289 ALCAECADGYEKEASQVRAKADGTTLALTYFPGW--PHANEPQTS-----HKAELMELRR 341
Query: 483 KWNSICNSIHKQPY 496
KW +C +H + +
Sbjct: 342 KWGILCQRVHSRSH 355
>gi|242054405|ref|XP_002456348.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
gi|241928323|gb|EES01468.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
Length = 915
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 40/292 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS--HSHPLQCKALELCFNVALNRL 80
A +A GHAQ+TPLH+A ++A G+LR A + + + E L RL
Sbjct: 17 AHNIASEAGHAQITPLHLAAALIADRPGVLRQAIAHASGGNDVAAADSFERVLASTLKRL 76
Query: 81 PASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISI 139
P+ + P P S ALV +RAQ+ Q+ RG LAV +QL++ +
Sbjct: 77 PSQSPPP-----DTVPA-STALVKVIRRAQSAQKVRGDSH------LAV----DQLLVGL 120
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQT 194
L+DP V ++EAG + +VK+ V++ +E S T + K+ +++ ++
Sbjct: 121 LEDPQVWDALKEAGVVAARVKAEVDKLRGGDNRRVESASGDTSFQAVKTYGRDLVEVAG- 179
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
LDP+ R+E++ V+ L + K N V++GE VV G+ +I
Sbjct: 180 -----------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV 228
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 RGDVPSNLLDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEESDGKVILF 280
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V IA VL+ R+G R + G F
Sbjct: 551 VTRLGQNDKERLVGLADRLHRRVIGQHEAVNAIAEAVLRSRAGLGRTQQPTGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V + +S + + S
Sbjct: 605 ------LFLGPTGVGKTELAKALAEQLFDDEKLLVRLDMSEYMEKHSVSRLIGAPPGYVG 658
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 659 HEEGG---QLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNT 715
Query: 775 IVILSC 780
++I++
Sbjct: 716 VIIMTS 721
>gi|340812276|gb|AEK76075.1| Hsp101 [Saccharum hybrid cultivar SP80-3280]
Length = 912
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTAC-LQSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A ++A G+LR A S + E + AL +LP+ + P
Sbjct: 25 GHAQLTPLHLAAALVADKGGILRQAITGASGGDGAAGDSFERVLSKALKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D +S
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQISDC 128
Query: 149 MREAGFSSTQVKSNVEQ-----AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+ +V++ +E+ +E S T + K+ + L + A
Sbjct: 129 LKEAGVSAARVRAELEKLRGGGGRRVESASGDTNFQALKTYGRD---LVEQAG------- 178
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L
Sbjct: 179 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 279
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ ++G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSKAGLGRPQQSTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK A +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKAFAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|125602736|gb|EAZ42061.1| hypothetical protein OsJ_26621 [Oryza sativa Japonica Group]
Length = 733
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 145/382 (37%), Gaps = 69/382 (18%)
Query: 425 CADCSAKFEAEARSLQSSSCNSDSPTS-------SLPAWLQQYKNEKKATLSNNDKDSGV 477
C C +E E L++ +D P S LP WLQ ++ KA
Sbjct: 159 CLLCKGSYERELAKLEAE--QTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELKLKRSK 216
Query: 478 RDLCKKWNSICNSIHKQ----PYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWA 533
+L +KW C IH P S TF+ P G + P K + W
Sbjct: 217 DELERKWRETCARIHSACPMAPALSVPLATFTPRPPVEPKLGVARGAAVPTL-KMNPSW- 274
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI-PEHKDLKQPLSSNRNSTPNSTSSSDI 592
+K + P+L L P +K L R P + + +
Sbjct: 275 --------------------EKPSVAPTLELRKSPPASPVKTDLVLCRLD-PGTNPAVEN 313
Query: 593 MEMEYVHKFKELNS---------ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMR 643
+ E L E+ L L +KV WQ D IA V++CRSG+ +
Sbjct: 314 EQKESCEGLTALQKAKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGK 373
Query: 644 RKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS 703
R+ + + + WL F G D K K+ L+ L+ + V+
Sbjct: 374 RR-----NVGTRGDMWLLFVGPDQAGKRKMVNALSELMANTRPVVVNFG----------- 417
Query: 704 TEDSRNKR-SRDEQSCSY-----IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIE 757
DSR R D + + ++R EAV NP V ++E ++Q D KRA+E
Sbjct: 418 -GDSRLGRVGNDGPNMGFWGKTALDRVTEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAME 476
Query: 758 SGRIVTSSGDEVSLGDAIVILS 779
+GR+ S G EVSLG+ I +L+
Sbjct: 477 TGRLPDSRGREVSLGNVIFVLT 498
>gi|357136407|ref|XP_003569796.1| PREDICTED: chaperone protein ClpB1-like isoform 1 [Brachypodium
distachyon]
Length = 913
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR A S + ++ E AL RLP+ P
Sbjct: 25 GHAQLTPLHLAAALAADRSGILRQAIAHASGGNDSAAESFERVAAAALKRLPSQAPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S +LV A +RAQ+ Q+ RG LAV +QL+I +L+D +S
Sbjct: 83 ---DAVPP-STSLVKAIRRAQSAQKSRGDSH------LAV----DQLLIGLLEDSQISDA 128
Query: 149 MREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 129 LKEAGVSAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG---------- 178
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L
Sbjct: 179 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 26/190 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNEKERLVGLDDRLHQRVVGQHEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILSC 780
+ ++I++
Sbjct: 711 FRNTVIIMTS 720
>gi|297733886|emb|CBI15133.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 130/284 (45%), Gaps = 56/284 (19%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLHVA ++ G+LR A + + + ++E FN AL +LP+
Sbjct: 17 AHELAMNSGHAQLTPLHVAVALITDPNGILRQAIIGAGGNEEAANSVERVFNKALKKLPS 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDD 142
T + + + RG LAV +QLI+ +L+D
Sbjct: 77 QTQS------------------------SQKSRGDTH------LAV----DQLILGLLED 102
Query: 143 PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSK 202
+ +++EAG S+++VKS VE+ E K+ ++ L + A
Sbjct: 103 SQIGDLLKEAGVSTSRVKSEVEKLRGKE---------GKKALKTYGRDLVEQAG------ 147
Query: 203 PRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEAL 260
LDP+ R+E++ VI L + K N V++GE VV G+ +I +GDVP L
Sbjct: 148 ---KLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 204
Query: 261 RDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+V+ + L + + R E E+R++ + V G+ I+
Sbjct: 205 AEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 248
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q V +A VL+ R+G R + G F
Sbjct: 519 VTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSF------ 572
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA +F N V I +S + + S
Sbjct: 573 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 626
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 627 HDEGG-----QLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFT 681
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 682 NTVIIMT 688
>gi|242082468|ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
gi|241942352|gb|EES15497.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
Length = 1128
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 209/503 (41%), Gaps = 83/503 (16%)
Query: 34 QVTPLHVANTMLAASTG-LLRTACLQS----HSHPLQCKALELCFNVALNRLPASTSTPM 88
Q T LH+ ++LA + LLR A ++ +S LQ KAL+LCF V+L+RLP+S++
Sbjct: 34 QTTSLHLIASLLAPTAAPLLRDALARARSAAYSPRLQLKALDLCFAVSLDRLPSSSNDQ- 92
Query: 89 LGGHCQFPTISNALVAAFKRAQAHQRRGS-----IENQQQP---LLAVKIELEQLIISIL 140
P ++N+L+AA KR+QA+QRR + Q AVK++L L+++IL
Sbjct: 93 -----HEPPVANSLMAAIKRSQANQRRNPDTFHFYHHHHQASASATAVKVDLSHLVLAIL 147
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKV 200
DDP VSRV F+ +SN + + I + PV +L++ T+
Sbjct: 148 DDPLVSRV-----FADAGFRSN---EIKVAILRPAPPVP----------LLARAGLPTRA 189
Query: 201 SKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEAL 260
P + L D V + A E R + D + +G P +
Sbjct: 190 RPPPLFLCSFAAADDADVPSPAPALAGA---------APGEDNCRRITDILARGRNPMLV 240
Query: 261 ----RDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL-EWAEFRAS 315
S +R + + + + G GI+ +GDL + A
Sbjct: 241 GVGAASAAADFAHASPYRVLPVNHQTDLLAAVAAAPTTTPGSGIIFTIGDLKDLVPDEAD 300
Query: 316 SSEQVRGYYCSIEHIIMEIGKLVCGIGENAR--FWLMGI-ATFQSYMRCKSGHPSLETLW 372
+ R ++ E+ +L+ AR W+MG AT+++Y+ S P ++ W
Sbjct: 301 LQDAAR-------RVVAEVTRLLETHRAAARQTVWVMGWSATYETYLAFLSKFPLVDKDW 353
Query: 373 SLHPLTI-------PAGSLSLSLITTDSD--LQSQSTSKKAESGVSW--LLFEGEEEN-- 419
L L I PA L + L +T+ ES V + + + E N
Sbjct: 354 ELQLLPITAVRDAGPAPGLVPPPAPVTTVPALSMPATTSFVESFVPFGGFMCDTYEANSC 413
Query: 420 KQLTCCADCSAKFEAE-ARSLQSSSCNSDSPTSSLPAWLQQ-----YKNEKKATLSNNDK 473
Q C C+ ++E E A ++ S +++ LP+ L N A +D
Sbjct: 414 PQALRCQQCNDRYEQEVATIIRGSGITAEAHQEGLPSMLHNGSMMGPNNGFDALKVRDDH 473
Query: 474 ---DSGVRDLCKKWNSICNSIHK 493
+ +++L KKWN C +H+
Sbjct: 474 MVLSTKIQNLKKKWNEYCLRLHQ 496
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ + I ++++CRS R +G K K + W F G D+
Sbjct: 714 NYKLLMERLFKAVGRQEEALSAICASIVRCRS-MERHRGANK-----KNDIWFSFYGPDS 767
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK ++A LA L+ S N + + LS + R KR+ D C +E
Sbjct: 768 IAKRRVAVALAELMHSSSENLIYLDLSLHDW----GNPNFRGKRATD---C-----ISEE 815
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS-LGDAIVILS 779
+ V +++V++AD Q+ A+E+GR G V+ L D+IV+LS
Sbjct: 816 LRKKRRSVIFLDNVDKADCLVQESLIHAMETGRYKDLHGGRVADLNDSIVVLS 868
>gi|357136409|ref|XP_003569797.1| PREDICTED: chaperone protein ClpB1-like isoform 2 [Brachypodium
distachyon]
Length = 920
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR A S + ++ E AL RLP+ P
Sbjct: 25 GHAQLTPLHLAAALAADRSGILRQAIAHASGGNDSAAESFERVAAAALKRLPSQAPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S +LV A +RAQ+ Q+ RG LAV +QL+I +L+D +S
Sbjct: 83 ---DAVPP-STSLVKAIRRAQSAQKSRGDSH------LAV----DQLLIGLLEDSQISDA 128
Query: 149 MREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 129 LKEAGVSAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG---------- 178
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L
Sbjct: 179 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNEKERLVGLDDRLHQRVVGQHEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|168058716|ref|XP_001781353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667246|gb|EDQ53881.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 29/282 (10%)
Query: 26 LARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTS 85
LA GHAQ TP+H+ +L + GLLR A ++E L ++P+ +
Sbjct: 20 LATEAGHAQYTPVHLTLALLNDNEGLLRQAIATVSGGDQTINSVERVLKNTLKKIPSQSP 79
Query: 86 TPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILDDPS 144
P +NAL+ K+AQ+ Q+ RG LAV +QLI+++L+D
Sbjct: 80 AP------DASPANNALIKCLKKAQSLQKSRGDSH------LAV----DQLILALLEDTQ 123
Query: 145 VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPR 204
++ +EAG S+T+VK LE S+ N + +SN L + + +
Sbjct: 124 IADCFKEAGVSATRVKR------ELEAVRGSSKKVDNATGDSNFQALKKYGR--DLVEDA 175
Query: 205 VSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRD 262
LDP+ R++++ V+ L + K N V++GE VV G+ +I +GDVP L +
Sbjct: 176 GKLDPVIGRDDEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLE 235
Query: 263 VKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
V+ + L + + R E E+R++ + V G+ I+
Sbjct: 236 VRLVALDMGALVAGAKYRGEFEERLKAVLKEVEDSDGKVILF 277
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L L + L ++V Q + V +A +L+ R+G R++ G F F G
Sbjct: 560 LLGLADRLHQRVVGQDEAVQAVAEAILRSRAGLGRQQQPTGSF------------LFLGP 607
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V + +S + S R + Q
Sbjct: 608 TGVGKTELAKALAEQLFDKENQLVRMDMSEYMEQHSVARLIGSPPGYVGHEEGGQ----- 662
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
EAV P+ V L ++VE+A + ++ GR+ G V + ++I++
Sbjct: 663 --LTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQLLDDGRLTDGQGRTVDFTNTVIIMT 718
>gi|148909835|gb|ABR18004.1| unknown [Picea sitchensis]
Length = 463
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 35/288 (12%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
+ +A GHAQ TP+H+A ++ G+LR A + +A+ AL ++P+
Sbjct: 17 GLEIATDSGHAQYTPVHLAIALIEDKAGILRQAISSAAGGDETVEAVLRVLRQALKKIPS 76
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDD 142
P P + +L+ + +RAQ+ Q+ ++ LAV + LI+ +L+D
Sbjct: 77 QDPAP-----DSIPP-NTSLIKSIRRAQSSQK-----SKGDTHLAV----DHLILGVLED 121
Query: 143 PSVSRVMREAGFSSTQVKSNVE----QAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
VS REAG S+ +VKS VE + ++ S T + K+ +++ A
Sbjct: 122 SQVSDCFREAGVSAARVKSEVEKLRGEGKKVDTASGDTNFQALKTYGRDLV-----EDAG 176
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
K LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDV
Sbjct: 177 K-------LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
P L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 230 PSNLLDVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEDAQGKVILF 277
>gi|110623255|emb|CAI94866.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 141/291 (48%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQ-SHSHPLQCKALELCFNVALNRLP 81
A +A GH Q+TPLH+A + A +G+LR A S + + E + AL RLP
Sbjct: 17 AHEMASEAGHPQLTPLHLAAALAADRSGILRQAIAHASGGNDAAADSFERVASAALKRLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S +LV A +RAQ+ Q+ RG LAV +QL++ +L
Sbjct: 77 SQSPPP-----DTVPA-STSLVKAVRRAQSAQKSRGDSH------LAV----DQLLMGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVEQAVS-----LEICSQSTPVSSNKSKESNVLVLSQTA 195
+D +S ++EAG S+ +VK+ VE+ +E S T + K+ +++ ++
Sbjct: 121 EDAQISDALKEAGISAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAG-- 178
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +
Sbjct: 179 ----------KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L L + L ++V Q + V + VL+ R+G R + G F F G
Sbjct: 561 LIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPTGSF------------LFLGP 608
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K ++AK LA +F N V I +S + S R Q
Sbjct: 609 TGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQ----- 663
Query: 722 ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E V P+ V L ++VE+A + ++ GR+ G V + ++I++
Sbjct: 664 --LTEQVRRRPYSVVLFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 720
>gi|162458166|ref|NP_001104935.1| heat-shock protein 101 [Zea mays]
gi|4584957|gb|AAD25223.1|AF077337_1 heat shock protein 101 [Zea mays]
gi|4928488|gb|AAD33606.1|AF133840_1 heat shock protein HSP101 [Zea mays]
Length = 912
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTAC-LQSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A G+LR A S + E N +L +LP+ + P
Sbjct: 25 GHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAAGDSFERVLNNSLKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ +RAQ A ++RG LAV +QL++ +L+D +S
Sbjct: 83 ---DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQISDC 128
Query: 149 MREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+ +V++ +E + +E S T + K+ + L + A
Sbjct: 129 LKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRD---LVEQAG------- 178
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L
Sbjct: 179 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|223975969|gb|ACN32172.1| unknown [Zea mays]
gi|413946195|gb|AFW78844.1| heat-shock protein 101 [Zea mays]
Length = 912
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTAC-LQSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A G+LR A S + E N +L +LP+ + P
Sbjct: 25 GHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAAGDSFERVLNNSLKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ +RAQ A ++RG LAV +QL++ +L+D +S
Sbjct: 83 ---DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQISDC 128
Query: 149 MREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+ +V++ +E + +E S T + K+ + L + A
Sbjct: 129 LKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRD---LVEQAG------- 178
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP L
Sbjct: 179 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|110623253|emb|CAI94865.2| heat shock protein 101 [Triticum durum]
Length = 917
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 40/284 (14%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACL-QSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR A S + + E + AL +LP+ + P
Sbjct: 25 GHAQITPLHLAAALAADRSGILRQAVAGASGGNASAGDSFERVLSAALKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D ++
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLMGLLEDAQIADC 128
Query: 149 MREAGFSSTQVKSNVEQ------AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSK 202
++EAG S+++V++ +E+ A +E S T + K+ +++ ++
Sbjct: 129 LKEAGVSASRVRAELEKLRGGDNARKVESASGDTNFQALKTYGRDLVEVAG--------- 179
Query: 203 PRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEAL 260
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +GDVP L
Sbjct: 180 ---KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNL 236
Query: 261 RDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 LDVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILF 280
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L + + L +V Q + V +A VL+ R+G R + G F
Sbjct: 551 VTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 605 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 658
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 659 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 711
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 712 FRNTVIIMT 720
>gi|4558484|gb|AAD22629.1|AF097363_1 heat shock protein 101 [Triticum aestivum]
Length = 918
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACL-QSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR A S + + E + AL +LP+ + P
Sbjct: 25 GHAQITPLHLAAALAADKSGILRQAVAGASGGNASAGDSFERVLSGALKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D ++
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLMGLLEDAQIADC 128
Query: 149 MREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLD 208
++EAG S+++V++ +E+ L S V S S ++N L + + LD
Sbjct: 129 LKEAGVSASRVRAELEK---LRGGDNSRKVES-ASGDTNFQALK--TYGRDLVEVAGKLD 182
Query: 209 PI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
P+ R+E++ V+ L + K N V++GE VV G+ ++ +GDVP L DV+ +
Sbjct: 183 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRLV 242
Query: 267 PLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V G+ I+
Sbjct: 243 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 280
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L + + L +V Q + V +A VL+ R+G R + G F
Sbjct: 551 VTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 605 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 658
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 659 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 711
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 712 FRNTVIIMT 720
>gi|255547217|ref|XP_002514666.1| chaperone clpb, putative [Ricinus communis]
gi|223546270|gb|EEF47772.1| chaperone clpb, putative [Ricinus communis]
Length = 912
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 29/285 (10%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPA 82
A LA GHAQ+TPLH+A ++ + A + +A + N A+ +LP+
Sbjct: 17 AHELAISAGHAQLTPLHLAVALITDPNAIFSQAISNAGGES-ASQAAQRVLNNAIKKLPS 75
Query: 83 STSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKIELEQLIISILD 141
+ P + P S +L+ +RAQA Q+ RG LAV +QLI+ +L+
Sbjct: 76 QSPPP-----DEIPP-STSLIKVIRRAQALQKSRGDSH------LAV----DQLILGLLE 119
Query: 142 DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVS 201
D + +++E+G ++ +VKS VE+ + + + + ++N L +T V
Sbjct: 120 DSQIGDLLKESGIAAGKVKSEVEK-----LRGKEGKKVESATADTNFQAL-KTYGRDLVE 173
Query: 202 KPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA 259
+ LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GDVP
Sbjct: 174 QAG-KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPNN 232
Query: 260 LRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 233 LNDVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILF 277
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + E L L L ++V Q V +A VL+ R+G R + G F
Sbjct: 549 VTRLGQNEKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N V I +S + + S
Sbjct: 603 ------LFLGPTGVGKTELAKALAEQLFDDENQMVRIDMSEYMEQHSVSRLIGAPPGYVG 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + EAV P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 657 HEEGG---QLTEAVRRRPYSVVLFDEVEKAHLSVFNTLLQVLDDGRLTDGQGRTVDFRNT 713
Query: 775 IVILSC 780
++I++
Sbjct: 714 VIIMTS 719
>gi|40060485|gb|AAR37417.1| heat shock protein HSP101 [Zea mays]
Length = 912
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTAC-LQSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A G+LR A S + E N +L +LP+ + P
Sbjct: 25 GHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAAGDSFERVLNNSLKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ +RAQ A ++RG LAV +QL++ +L+D +S
Sbjct: 83 ---DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLLEDSQISDC 128
Query: 149 MREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+ +V++ +E + +E S T + K+ +++ A K
Sbjct: 129 LKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLV-----EQAGK---- 179
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++G VV G+ +I +GDVP L
Sbjct: 180 ---LDPVIGRDEEIRRVVRILSRRTKNNPVLIGGPGVGKTAVVEGLAQRIVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVN 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|357157735|ref|XP_003577897.1| PREDICTED: uncharacterized protein LOC100845733 [Brachypodium
distachyon]
Length = 1122
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 99/172 (57%), Gaps = 21/172 (12%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA----ASTGLLRTACLQSHSHP- 63
+Q L A + + A+ ARRR HAQ T LH+ +++L+ +S LLR A ++ S
Sbjct: 9 RQCLAPAAVAALDSAVVSARRRAHAQTTSLHLISSLLSPAAPSSPPLLRDALARARSAAY 68
Query: 64 ---LQCKALELCFNVALNRLPASTSTPMLGGHC-QFPTISNALVAAFKRAQAHQRRG--- 116
+Q KALELCF V+L+RLP++++ P +SN+L+AA KR ++HQRR
Sbjct: 69 APRVQLKALELCFAVSLDRLPSASAASSSSSAESDEPPVSNSLMAAVKR-RSHQRRTPTP 127
Query: 117 --------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVK 160
++ + VK+EL QL+++ILDDP VSRV +AGF S +K
Sbjct: 128 SVYVHHNHALSTRAASASQVKVELSQLVLAILDDPVVSRVFGDAGFRSADIK 179
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L +L K V Q++ + I ++ C+S RR+G + K + W F G D+
Sbjct: 707 NSKQLVESLFKVVGRQEEALKAICESIAWCKS-MERRRGANR-----KNDIWFSFHGSDS 760
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK K+ LA L+ GS N + + LS DS+ R + C +
Sbjct: 761 MAKRKVGVALAELLHGSKENMIYLDLS--PQDWGDSS-----YRGKTGTDC-----IVDE 808
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
+S V +++V++AD Q A E+GR G EV + D++V+LS +
Sbjct: 809 LSKKRRSVIFLDNVDKADCLVQDTLIHASETGRFRDLRGKEVDINDSVVVLSTRT 863
>gi|110623251|emb|CAI94864.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 137/278 (49%), Gaps = 28/278 (10%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACL-QSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR A S + + E AL +LP+ + P
Sbjct: 25 GHAQITPLHLAAALAADKSGILRQAVAGASGGNASAGDSFERVLAGALKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D ++
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLMGLLEDAQIADC 128
Query: 149 MREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLD 208
++EAG S+++V++ +++ L S V S + + + +V+ LD
Sbjct: 129 LKEAGVSASRVRAELDK---LRGGDNSRKVESASGDTTFQALKTYGRDLVEVAG---KLD 182
Query: 209 PI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
P+ R+E++ V+ L + K N V++GE VV G+ ++ +GDVP L DV+ +
Sbjct: 183 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRLV 242
Query: 267 PLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V G+ I+
Sbjct: 243 ALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILF 280
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L + + L +V Q + V +A VL+ R+G R + G F
Sbjct: 551 VTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 605 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 658
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 659 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 711
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 712 FRNTVIIMT 720
>gi|392393805|ref|YP_006430407.1| ATP-dependent chaperone ClpB [Desulfitobacterium dehalogenans ATCC
51507]
gi|390524883|gb|AFM00614.1| ATP-dependent chaperone ClpB [Desulfitobacterium dehalogenans ATCC
51507]
Length = 864
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 165/814 (20%), Positives = 308/814 (37%), Gaps = 145/814 (17%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + QA T+A R G++QV P H+ ++L G++ L + P AL
Sbjct: 8 FTQKSQEAIIQAQTMAERNGNSQVEPEHLLLSLLEQGEGVV-PQVLTKLNIP--VGALAQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+NR P M+G + Q TIS+ L AH +++ +
Sbjct: 65 KVRQEINRFPR-----MMGSNVQL-TISSRLRTVL--VSAHDEMEIFKDEY-------VS 109
Query: 132 LEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L+++IL + +V+++ G + ++ + + + + TP + ++ E
Sbjct: 110 TEHLLLAILSQAGGAAEKVLKQEGLNREKLLQALREVRGTQRVTSQTPEGTYRALEQYGR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + A R LDP+ R+E++ VI+ L K K N V++GE +V G+
Sbjct: 170 NLVEQAR-------RGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIVEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
+I +GDVPE+++D K + L + S R E E+R++ + V+ I+L +
Sbjct: 223 AQRIVRGDVPESVKDKKIIALDMGSLIAGAKYRGEFEERLKAVLKEVQER--EDIILFID 280
Query: 306 DLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR----- 360
+L A ++E M+ G ++ + ++G T Y +
Sbjct: 281 ELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELHMVGATTLDEYRKFIEKD 328
Query: 361 ---------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQST 400
G PS+E S+ H + I G++ + + +D + +
Sbjct: 329 AALERRFQPVMVGAPSVEDTISILRGLKERYETHHGVRITDGAIIAAAVLSDRYISDRFL 388
Query: 401 SKKA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSC-NSDSPTSSLPA 455
KA + + + E + +L + E E +L+ S +
Sbjct: 389 PDKAIDLIDEAAARMRMEITSDPYELDQIKRRILQLEIEREALKKEKDEGSKERLEKIEE 448
Query: 456 WLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG 515
L +K E+ A + + G R++ NS+ +I + E+ +
Sbjct: 449 DLANHKEERSALEA---QLQGEREVLATINSLKENIDQTRLKMEQ-----------AQQA 494
Query: 516 FSYDQ----QYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKD 571
F Y++ QY K +D +E + R++ L E ++ +E
Sbjct: 495 FDYNKAAELQYGVLPKLEKDLNALEEQLRNRKNT-LLKQEVGEEDIAE------------ 541
Query: 572 LKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIA 631
+ + P V + E E L + + ++V Q++ V +A
Sbjct: 542 ----VVAKWTQVP-------------VARLLESEMEKLVHMEERIHQRVIGQEEAVKAVA 584
Query: 632 NTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNF 688
+ V + R+G R G F F G K ++AK LA +F
Sbjct: 585 DAVRRSRAGLQDPNRPLGSF------------LFLGPTGVGKTELAKALAEFLFDDEQGI 632
Query: 689 VSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADY 746
V I +S + S Y E + EAV P+ V L ++VE+A
Sbjct: 633 VRIDMSEYMEKHTVS-----RLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHG 687
Query: 747 CSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ ++ GR+ G V+ + +VIL+
Sbjct: 688 DVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILTS 721
>gi|222622817|gb|EEE56949.1| hypothetical protein OsJ_06655 [Oryza sativa Japonica Group]
Length = 630
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 34/294 (11%)
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSIS--SFRHMNRVEVEQRVE 286
N VVVG+ ++ E V ++ ++E GDVP LR L L +S R M R +V+ +V
Sbjct: 150 NPVVVGDSVSVAEASVAELMRRLETGDVPGELRGAHVLRLHLSRVHLRLMTRADVDAQVA 209
Query: 287 EIKNLVRSCL----GRGIVLNLGDLEWA--EFRASSSEQVRGYYCSIEHIIMEIGKLVCG 340
E++ S + G+V+ +GD+ WA + + Y +H++ E+ +L+
Sbjct: 210 ELRRTANSIVVDAKAAGLVIYVGDVRWAVDDDDHHHHHALAEYSAPEDHMVAELARLMSE 269
Query: 341 I--GENARFWLMGIATFQSYMRCKSGH-----PSLETLWSLHPLTIP-------AGSLSL 386
+ R WL+ A++Q+Y+RC+ PSLE WSL + +P LSL
Sbjct: 270 LRAASRGRAWLVAAASYQTYVRCQQRRRRRRAPSLEATWSLQAVVVPAGAGADAGTGLSL 329
Query: 387 S----LITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSS 442
+ +K E L G++ CA+C+ +E EA +++
Sbjct: 330 GRRAPPAPPPRVAEDDQIAKLGEIPTLDLALGGDDGGVP-ALCAECADGYEKEASQVRAK 388
Query: 443 SCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPY 496
+ + + P W + NE + + + + +L +KW +C +H + +
Sbjct: 389 ADGTTLALTYFPGW--PHANEPQTS-----HKAELMELRRKWGILCQRVHSRSH 435
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 75/132 (56%), Gaps = 39/132 (29%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------- 45
MRAGG T+ Q L+A+AA+V+K A+ LARRRGHAQ+TPLHVA T+L
Sbjct: 1 MRAGGYTVHQALSADAAAVLKLALALARRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDP 60
Query: 46 -----------AASTGLLRTACLQ-------------SHSHPLQCKALELCFNVALNRLP 81
+ GLLR AC++ + SHPL+C+ALELCFNVALNRLP
Sbjct: 61 PPFACSGGEPSCCAHGLLRRACVRAHPAVAACAPAAAAASHPLRCRALELCFNVALNRLP 120
Query: 82 ASTSTPMLGGHC 93
A+ + G C
Sbjct: 121 ATNAMADCGRAC 132
>gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein [Triticum aestivum]
Length = 918
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 137/278 (49%), Gaps = 28/278 (10%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACL-QSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR A S + + E AL +LP+ + P
Sbjct: 25 GHAQITPLHLAAALAADKSGILRQAVAGASGGNASAGDSFERVLAGALRKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D ++
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLMGLLEDAQIADC 128
Query: 149 MREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLD 208
++EAG S+++V++ +++ L S V S + + + +V+ LD
Sbjct: 129 LKEAGVSASRVRAELDK---LRGGDNSRKVESAFGDTTFQALKTYGRDLVEVAG---KLD 182
Query: 209 PI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
P+ R+E++ V+ L + K N V++GE VV G+ ++ +GDVP L DV+ +
Sbjct: 183 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRLV 242
Query: 267 PLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V G+ I+
Sbjct: 243 ALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILF 280
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L + + L +V Q + V +A VL+ R+G R + G F
Sbjct: 551 VTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 605 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 658
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 659 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 711
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 712 FRNTVIIMT 720
>gi|326531902|dbj|BAK01327.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 916
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 39/283 (13%)
Query: 31 GHAQVTPLHVANTMLAASTGLLR-TACLQSHSHPLQCKALELCFNVALNRLPASTSTPML 89
GHAQ+TPLH+A + A +G+LR S + + E AL +LP+ + P
Sbjct: 25 GHAQITPLHLAAALAADKSGILRQAVAGASGGNAAAGDSFERVLTAALKKLPSQSPPP-- 82
Query: 90 GGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRV 148
P S AL+ A +RAQ A ++RG LAV +QL++ +L+D ++
Sbjct: 83 ---DSVPA-STALIKAIRRAQSAQKKRGDSH------LAV----DQLLMGLLEDSQIADC 128
Query: 149 MREAGFSSTQVKSNVEQ-----AVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKP 203
++EAG S+++V++ +E+ + +E S T + K+ +++ ++
Sbjct: 129 LKEAGVSASRVRAELEKLRGGDSRKVESASGDTNFQALKTYGRDLVEVAG---------- 178
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+E++ V+ L + K N V++GE VV G+ ++ +GDVP L
Sbjct: 179 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLL 236
Query: 262 DVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 237 DVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L + + L +V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|255592933|ref|XP_002535750.1| conserved hypothetical protein [Ricinus communis]
gi|223522072|gb|EEF26633.1| conserved hypothetical protein [Ricinus communis]
Length = 596
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 611 SLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAK 670
S+ AL +KV WQ++ + I + +C++G R G S + WL F G D K
Sbjct: 185 SITKALTEKVGWQEEAICAITRAISRCKAGYGRSCG-----STARGNIWLTFLGPDKVGK 239
Query: 671 EKIAKELARLVFGSHNNFVSIAL------SSFSSTRADSTEDSRNKRSRDEQSCSYIERF 724
++IA LA ++FGSH + +S+ L S +S + + + R + YI
Sbjct: 240 KRIASMLAEIMFGSHEHLISVDLRFHDGSSQLNSVFECQESNDYDVKFRGKTVVDYI--- 296
Query: 725 AEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
+ + PH V L+E+V++AD Q +A+ +G+ S G E+ + + I +++ S
Sbjct: 297 SMELGKRPHSVVLLENVDKADLLVQNSLSQAVRTGKFADSHGREIGINNMIFVMTSTS 354
>gi|449519683|ref|XP_004166864.1| PREDICTED: uncharacterized protein LOC101231048, partial [Cucumis
sativus]
Length = 702
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 604 LNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQ 663
L+ SL NAL +KV WQ I T+L+CR+G +R+ S + + WL F
Sbjct: 290 LDIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRS-----SNSRGDIWLTFL 344
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFS-STRADSTEDSRNKRSRDE--QSCSY 720
G D K KI+ LA L+ GS N +S+ S R +S D + DE + +
Sbjct: 345 GPDMMGKRKISFALAELMVGSRENLISVDFGSQDRDQRHNSLFDCQGLNGYDERFRGQTV 404
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++ A + P V L+E+V++AD ++ +AI +G+ + S G + ++ + I +
Sbjct: 405 VDYVAGELRKKPSSVVLLENVDKADVRAKSCLSQAIATGKFLDSHGRQFTINNTIFL 461
>gi|242091131|ref|XP_002441398.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor]
gi|241946683|gb|EES19828.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor]
Length = 913
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTAC-LQSHSHPLQCKALELCFNVALNRLP 81
A +A GHAQ+TPLH+A + A G+LR A S ++ E + AL +LP
Sbjct: 17 AHEMASEAGHAQLTPLHLAAALAADKGGILRQAITGASGGDGAAGESFERVLSNALKKLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S AL+ +RAQ A ++RG LAV +QL++ ++
Sbjct: 77 SQSPPP-----DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLV 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+D +S ++EAG S+ +V++ +E + +E S T + K+ +++
Sbjct: 121 EDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLV-----E 175
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
A K LDP+ R+E++ V+ L + K N V++GE VV G+ +I +
Sbjct: 176 QAGK-------LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILF 279
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|125583956|gb|EAZ24887.1| hypothetical protein OsJ_08665 [Oryza sativa Japonica Group]
Length = 966
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 51/257 (19%)
Query: 612 LCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L L + V WQ + +A + K RSG +R+G + +TW+ F G D K
Sbjct: 575 LVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGM----GPTRADTWVLFSGHDVAGKT 630
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNN 731
K+A+ L+ VFG+ N V++ L+ + E + R R C A+A+ N
Sbjct: 631 KMAEALSMSVFGT--NAVALRLA------GNGGEPIASCRGRTALDC-----VADAIRAN 677
Query: 732 PHRVFLIE--DVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI-VILSCESFSSRSR 788
P RV +++ D D Q RA+ESGR+V S G +V+LG+AI V++S + +R
Sbjct: 678 PLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVVMSLDD----TR 733
Query: 789 AC--------SP---------------PTKQKSDGCEEEKGAAMEGTSPSVSLDLNICID 825
C SP P Q DG + + + SP + LDLN+ +
Sbjct: 734 RCQEDHQFTDSPWNLELRVRNNARKRRPEPQPLDGAGDRRLKPRK-DSPPLHLDLNLSMC 792
Query: 826 DDSTEDQSIDDIGLLES 842
+D T+D DD G ES
Sbjct: 793 EDHTDD---DDSGGEES 806
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 222 LMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEV 281
L +KRN V+VG+ + ++ VV+ V+ I++ + A V ++R E+
Sbjct: 211 LKRGKKRNPVLVGDTV-DVDAVVQEVVTMIQRQRLGNAR--VISFQREFGDLVDLDRAEL 267
Query: 282 EQRVEEIKNLVRSCL------GRGIVLNLGDLEW--AEFRASSSEQVRGYYCSIE---HI 330
+++E+ +RS L G+V+NLG+L+W E + EQ + ++
Sbjct: 268 AAKIKELGEAIRSELLSPASRSAGVVVNLGNLQWLVEERCVAPGEQEKRRDVVLDTARAA 327
Query: 331 IMEIGKLVCGIGENA-RFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI 379
+ E+ +++ GE R W++G AT +Y++C+ HPSLE+ W L + I
Sbjct: 328 VAEMARILRQSGEREHRVWVIGTATCATYLKCQVYHPSLESEWDLQAVPI 377
>gi|302772230|ref|XP_002969533.1| hypothetical protein SELMODRAFT_170696 [Selaginella moellendorffii]
gi|300163009|gb|EFJ29621.1| hypothetical protein SELMODRAFT_170696 [Selaginella moellendorffii]
Length = 900
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 26 LARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTS 85
+A+ GHAQ TPLH+A +L GLL+ A +LE L+++P
Sbjct: 20 MAQSMGHAQFTPLHLALVLLTDPEGLLKQAVGDE-----SAASLERVLRRYLSKIPCQNP 74
Query: 86 TPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSV 145
P + P +++AL ++A + Q+ ++ LAV +QLI+++L+D +
Sbjct: 75 PPE-----EVP-VNSALSKIVRKAHSAQK-----SKGDTYLAV----DQLILALLEDSQL 119
Query: 146 SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV 205
S + EAG S ++VKS +E+ S + ++N L + + +
Sbjct: 120 SDCLTEAGISPSKVKSELEK------LRGSGKKVESAGGDTNFDALKKYGK--DLVEEAG 171
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GD+P L DV
Sbjct: 172 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPSNLSDV 231
Query: 264 KCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ + L + + R E E+R++ + V G+ I+
Sbjct: 232 RVIALDMGALIAGAKYRGEFEERLKAVLKEVEDAQGKVILF 272
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q + V +A VL+ R+G R + G F
Sbjct: 543 VKRLGQDDKERLVGLGKRLHERVVGQDEAVEAVAEAVLRSRAGLGRPRQPTGSF------ 596
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N + + +S + A +
Sbjct: 597 ------MFLGPTGVGKTELAKALAEQLFDDENQLIRLDMSEYMEQHAVA-----RLIGAP 645
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 646 PGYVGYEEGGQLTEAVRRRPYSVILFDEVEKAHSSIFNTLLQLLDDGRLTDGQGRTVNFA 705
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 706 ECVIIMT 712
>gi|449531621|ref|XP_004172784.1| PREDICTED: uncharacterized protein LOC101230769 [Cucumis sativus]
Length = 466
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 165/391 (42%), Gaps = 72/391 (18%)
Query: 415 GEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKD 474
G+EE++ LTCC +C++ F+ E L+S + LP+WLQ E+
Sbjct: 27 GKEEHQNLTCCEECTSNFQNELLHLKSFH------SKQLPSWLQSPPKEE---------- 70
Query: 475 SGVRDLCKKWNSICNSIHKQPYYSE---RTLTFSSASPSSSTSGFSYDQQYPNFHKTHRD 531
+ +L +KWN +CN++H+ ++ ++SS+ P S S+ + H+T +
Sbjct: 71 --LVELKRKWNKLCNTLHRDNSVQSLIGKSFSYSSSYPWWPKSNISFTDHH--HHQTSKP 126
Query: 532 WAV------VEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQ-PLSSNRNSTP 584
+QS F F + A K L L ++ D K+ ++ ++
Sbjct: 127 LQTSNFVPRFRRQQSCTTIEFDFGN-AKTKQEQSGELSLNSLKNMDGKEVKITLALGNSL 185
Query: 585 NSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR 644
S SS++ MEME K + + LE+ VPW+ + + IA V+ +M++
Sbjct: 186 FSDSSAESMEMESERKSER------GEILKVLEENVPWRSELIPCIAEAVI-----SMKK 234
Query: 645 KGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADST 704
K W+ +G D K K+ +A L+FGS + + + S
Sbjct: 235 DDKLIQ--------WVLMEGNDFIGKRKMGIVIAELLFGSVDFLLDLNAKS--------- 277
Query: 705 EDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
+E S E +A+ N V L+EDVE AD K + A +G+
Sbjct: 278 ---------EEMGISKCEMLEKALKLNKELVVLVEDVEMADSQLMKLLENAFHNGKF--E 326
Query: 765 SGDEVSLGDAIVILSCESFSS--RSRACSPP 793
E ++ I IL+ ++ S ++R PP
Sbjct: 327 DMKEETVQKVIFILTKDNSSDKMKNRDLWPP 357
>gi|224098627|ref|XP_002311226.1| predicted protein [Populus trichocarpa]
gi|222851046|gb|EEE88593.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 29/257 (11%)
Query: 557 TSEPSLRLY-IPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHK--------------- 600
T++ LR+ +P +LK+ ++ N P S S ++ VH
Sbjct: 5 TTDLGLRISSVPTSNELKKTVNQNHMELPQDRSGSFSANVDVVHGSMSDHWAPSSSSSSS 64
Query: 601 ---FKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
+ + N L A+ ++V WQ + + I+ T+ +C++ +R+G + ++ +
Sbjct: 65 PDYGGQFDLSNAKMLFRAVVERVGWQDEAIRVISQTIARCKARNEKRQG-----ASLRGD 119
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSS---FSSTRADSTEDSRNKRSRD 714
W F G D K+KIA LA +++GS NF+S LS+ T N +
Sbjct: 120 IWFSFCGPDRRGKKKIASALAEIIYGSRENFISADLSAQDGMIHTHMLFDHPEVNGYTVK 179
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + ++ A + P + +E++++AD +QK AI++G+ S G E+ + +A
Sbjct: 180 LRGKTVVDFVAGELCKKPLSIVFLENIDKADVQAQKSLSHAIQTGKFADSHGREIGISNA 239
Query: 775 IVILSCESFSSRSRACS 791
I + + S + + CS
Sbjct: 240 IFVTT--STLTEDKVCS 254
>gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa Japonica Group]
Length = 912
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQC-KALELCFNVALNRLP 81
A +A GHAQ+TPLH+ + A G+LR A Q+ + E + AL +LP
Sbjct: 17 AHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGAPDSFERVVSGALKKLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S AL+ +RAQ A ++RG LAV +QL++ +L
Sbjct: 77 SQSPPP-----DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+D +S ++EAG S+ +V++ +E + +E S T + K+ +++
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLV-----E 175
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
A K LDP+ R+E++ V+ L + K N V++GE VV G+ +I +
Sbjct: 176 QAGK-------LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDEERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILYDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|302810123|ref|XP_002986753.1| hypothetical protein SELMODRAFT_124842 [Selaginella moellendorffii]
gi|300145407|gb|EFJ12083.1| hypothetical protein SELMODRAFT_124842 [Selaginella moellendorffii]
Length = 900
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 26 LARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTS 85
+A+ GHAQ TPLH+A +L GLL+ A +LE L+++P
Sbjct: 20 MAQSMGHAQFTPLHLALVLLTDPEGLLKQAVGDE-----SAASLERVLRRYLSKIPCQNP 74
Query: 86 TPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSV 145
P + P +++AL ++A + Q+ ++ LAV ++LI+++L+D +
Sbjct: 75 PPE-----EVP-VNSALSKIVRKAHSAQK-----SKGDTYLAV----DRLILALLEDSQL 119
Query: 146 SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV 205
S + EAG S ++VKS +E+ S + +SN L + + +
Sbjct: 120 SDCLTEAGISPSKVKSELEK------LRGSGKKVESAGGDSNFDALKKYGK--DLVEEAG 171
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
LDP+ R+E++ V+ L + K N V++GE VV G+ +I +GD+P L DV
Sbjct: 172 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPSNLSDV 231
Query: 264 KCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ + L + + R E E+R++ + V G+ I+
Sbjct: 232 RVIALDMGALIAGAKYRGEFEERLKAVLKEVEDAQGKVILF 272
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L L ++V Q + V +A VL+ R+G R + G F
Sbjct: 543 VKRLGQDDKERLVGLGKRLHERVVGQDEAVEAVAEAVLRSRAGLGRPRQPTGSF------ 596
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N + + +S + A +
Sbjct: 597 ------MFLGPTGVGKTELAKALAEQLFDDENQLIRLDMSEYMEQHAVA-----RLIGAP 645
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 646 PGYVGYEEGGQLTEAVRRRPYSVILFDEVEKAHSSIFNTLLQLLDDGRLTDGQGRTVNFA 705
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 706 ECVIIMT 712
>gi|224112493|ref|XP_002316209.1| predicted protein [Populus trichocarpa]
gi|222865249|gb|EEF02380.1| predicted protein [Populus trichocarpa]
Length = 628
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 603 ELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFF 662
+ + N L A+ ++V WQ + + I+ T+ CR+ +R+G + ++ + W F
Sbjct: 210 QFDPSNAKMLFRAVVERVGWQDEAIRIISQTIAHCRAINEKRQG-----ASLRGDIWFSF 264
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTED--SRNKRSRDEQSCSY 720
G D K+KIA LA +++GS NF+S LSS A D + + + +
Sbjct: 265 CGPDRCGKKKIASALAEVIYGSRENFISADLSSQDGMVAHMVFDRPEMSGYTVKFRGKTM 324
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
++ A + P + +E++++AD +QK +AI++G+ S G EV + +AI +
Sbjct: 325 VDFVAGELCKKPLSIVFLENIDKADVQAQKSLSQAIQTGKFADSHGREVGISNAIFV 381
>gi|115464933|ref|NP_001056066.1| Os05g0519700 [Oryza sativa Japonica Group]
gi|62510680|sp|Q6F2Y7.1|CLPB1_ORYSJ RecName: Full=Chaperone protein ClpB1; AltName: Full=ATP-dependent
Clp protease ATP-binding subunit ClpB homolog 1;
AltName: Full=Casein lytic proteinase B1; AltName:
Full=Heat shock protein 101
gi|18033450|gb|AAL57165.1|AF332981_1 heat shock protein [Oryza sativa Japonica Group]
gi|50080323|gb|AAT69657.1| putative heat shock protein HSP101 [Oryza sativa Japonica Group]
gi|52353699|gb|AAU44265.1| heat shock protein HSP101 [Oryza sativa Japonica Group]
gi|113579617|dbj|BAF17980.1| Os05g0519700 [Oryza sativa Japonica Group]
gi|215740589|dbj|BAG97245.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632258|gb|EEE64390.1| hypothetical protein OsJ_19232 [Oryza sativa Japonica Group]
Length = 912
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQC-KALELCFNVALNRLP 81
A +A GHAQ+TPLH+ + A G+LR A Q+ + E + AL +LP
Sbjct: 17 AHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGAPDSFERVVSGALKKLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S AL+ +RAQ A ++RG LAV +QL++ +L
Sbjct: 77 SQSPPP-----DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+D +S ++EAG S+ +V++ +E + +E S T + K+ +++
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLV-----E 175
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
A K LDP+ R+E++ V+ L + K N V++GE VV G+ +I +
Sbjct: 176 QAGK-------LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|218197115|gb|EEC79542.1| hypothetical protein OsI_20656 [Oryza sativa Indica Group]
Length = 913
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 39/291 (13%)
Query: 23 AMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQC-KALELCFNVALNRLP 81
A +A GHAQ+TPLH+ + A G+LR A Q+ + E + AL +LP
Sbjct: 17 AHEMASEAGHAQLTPLHLTAALAADKGGILRQAISQASGGDAGAPDSFERVVSGALKKLP 76
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRGSIENQQQPLLAVKIELEQLIISIL 140
+ + P P S AL+ +RAQ A ++RG LAV +QL++ +L
Sbjct: 77 SQSPPP-----DSVPA-STALIKVIRRAQSAQKKRGDSH------LAV----DQLLLGLL 120
Query: 141 DDPSVSRVMREAGFSSTQVKSNVE-----QAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+D +S ++EAG S+ +V++ +E + +E S T + K+ +++
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLV-----E 175
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
A K LDP+ R+E++ V+ L + K N V++GE VV G+ +I +
Sbjct: 176 QAGK-------LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVR 228
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVP L DV+ + L + + R E E+R++ + V G+ I+
Sbjct: 229 GDVPSNLLDVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILF 279
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 26/189 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V + + + E L L + L ++V Q + V +A VL+ R+G R + G F
Sbjct: 550 VTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F N V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVG 657
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Q E V P+ V L ++VE+A + ++ GR+ G V
Sbjct: 658 HEEGGQ-------LTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVD 710
Query: 771 LGDAIVILS 779
+ ++I++
Sbjct: 711 FRNTVIIMT 719
>gi|423074005|ref|ZP_17062740.1| ATP-dependent chaperone protein ClpB [Desulfitobacterium hafniense
DP7]
gi|361855154|gb|EHL07151.1| ATP-dependent chaperone protein ClpB [Desulfitobacterium hafniense
DP7]
Length = 864
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 163/819 (19%), Positives = 307/819 (37%), Gaps = 155/819 (18%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + QA T+A R G++QV P H+ +L G++ L P AL
Sbjct: 8 FTQKSQEAIIQAQTMAERNGNSQVEPEHLLLALLEQGEGVV-PQVLTKLDIP--VGALVQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NRLP M+G + Q P + LV+A H + ++
Sbjct: 65 KVRQEINRLPR-----MMGANVQLTISPRLRTVLVSA------HDEMETFKDDY------ 107
Query: 129 KIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+++ L + +++++ G + ++ + + + + TP + ++ E
Sbjct: 108 -VSTEHLLLATLSQGGGAAEKILKQEGLNREKLLQALREVRGTQRVTSQTPEGTFRALEQ 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A R LDP+ R+E++ VI+ L K K N V++GE +V
Sbjct: 167 YGRNLVEQAR-------RGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLS----ISSFRHMNRVEVEQRVEEIKNLVRSCLGRGI 300
G+ +I +GDVPE+++D K + L I+ ++ R E E+R++ + V+ I
Sbjct: 220 EGLAQRIVRGDVPESVKDKKIIALDMGSLIAGAKY--RGEFEERLKAVLKEVQER--EDI 275
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR 360
+L + +L A ++E M+ G ++ + ++G T Y +
Sbjct: 276 ILFIDELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELHMVGATTLDEYRK 323
Query: 361 --------------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDL 395
G PS+E S+ H + I G++ + + +D +
Sbjct: 324 YIEKDAALERRFQPVTVGAPSVEDTISILRGLKERYETHHGVRITDGAIIAAAVLSDRYI 383
Query: 396 QSQSTSKKA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSC-NSDSPT 450
+ KA + + + E + +L + E E +L+ S
Sbjct: 384 SDRFLPDKAIDLIDEAAARMRMEITSDPYELDQIKRRILQLEIEREALKKEKDEGSKERL 443
Query: 451 SSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPS 510
+ L K E+ A + + G R++ + NS+ I + E+
Sbjct: 444 EKIEEDLANLKEERSALEA---QLQGEREVLARINSLKEDIDQNRLKMEQ---------- 490
Query: 511 SSTSGFSYDQ----QYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
+ F Y++ QY K ++ +E + R++ L E ++ +E
Sbjct: 491 -AQQAFDYNKAAELQYGILPKLEKELNALEEQLRNRKNTLL-KQEVGEEDIAE------- 541
Query: 567 PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDT 626
+ + P V K E E L + + ++V Q++
Sbjct: 542 ---------VVAKWTQVP-------------VAKLLESEMEKLVHMEARIHQRVIGQEEA 579
Query: 627 VYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFG 683
V +A+ V + R+G R G F F G K ++AK LA +F
Sbjct: 580 VKAVADAVRRSRAGLQDPNRPLGSF------------LFLGPTGVGKTELAKALAEFLFD 627
Query: 684 SHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDV 741
V I +S + S Y E + EAV P+ V L ++V
Sbjct: 628 DDQGIVRIDMSEYMEKHTVS-----RLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEV 682
Query: 742 EQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E+A + ++ GR+ G V+ + +VIL+
Sbjct: 683 EKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILTS 721
>gi|89894414|ref|YP_517901.1| hypothetical protein DSY1668 [Desulfitobacterium hafniense Y51]
gi|89333862|dbj|BAE83457.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 864
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 163/819 (19%), Positives = 307/819 (37%), Gaps = 155/819 (18%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + QA T+A R G++QV P H+ +L G++ L P AL
Sbjct: 8 FTQKSQEAIIQAQTMAERNGNSQVEPEHLLLALLEQGEGVV-PQVLTKLDIP--VGALVQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NRLP M+G + Q P + LV+A H + ++
Sbjct: 65 KVRQEVNRLPR-----MMGANVQLTISPRLRTVLVSA------HDEMETFKDDY------ 107
Query: 129 KIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+++ L + +++++ G + ++ + + + + TP + ++ E
Sbjct: 108 -VSTEHLLLATLSQGGGAAEKILKQEGLNREKLLQALREVRGTQRVTSQTPEGTFRALEQ 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A R LDP+ R+E++ VI+ L K K N V++GE +V
Sbjct: 167 YGRNLVEQAR-------RGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLS----ISSFRHMNRVEVEQRVEEIKNLVRSCLGRGI 300
G+ +I +GDVPE+++D K + L I+ ++ R E E+R++ + V+ I
Sbjct: 220 EGLAQRIVRGDVPESVKDKKIIALDMGSLIAGAKY--RGEFEERLKAVLKEVQER--EDI 275
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR 360
+L + +L A ++E M+ G ++ + ++G T Y +
Sbjct: 276 ILFIDELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELHMVGATTLDEYRK 323
Query: 361 --------------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDL 395
G PS+E S+ H + I G++ + + +D +
Sbjct: 324 YIEKDAALERRFQPVTVGAPSVEDTISILRGLKERYETHHGVRITDGAIIAAAVLSDRYI 383
Query: 396 QSQSTSKKA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSC-NSDSPT 450
+ KA + + + E + +L + E E +L+ S
Sbjct: 384 SDRFLPDKAIDLIDEAAARMRMEITSDPYELDQIKRRILQLEIEREALKKEKDEGSKERL 443
Query: 451 SSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPS 510
+ L K E+ A + + G R++ + NS+ I + E+
Sbjct: 444 EKIEEDLANLKEERSALEA---QLQGEREVLARINSLKEDIDQNRLKMEQ---------- 490
Query: 511 SSTSGFSYDQ----QYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
+ F Y++ QY K ++ +E + R++ L E ++ +E
Sbjct: 491 -AQQAFDYNKAAELQYGILPKLEKELNALEEQLRNRKNTLL-KQEVGEEDIAE------- 541
Query: 567 PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDT 626
+ + P V K E E L + + ++V Q++
Sbjct: 542 ---------VVAKWTQVP-------------VAKLLESEMEKLVHMEARIHQRVIGQEEA 579
Query: 627 VYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFG 683
V +A+ V + R+G R G F F G K ++AK LA +F
Sbjct: 580 VKAVADAVRRSRAGLQDPNRPLGSF------------LFLGPTGVGKTELAKALAEFLFD 627
Query: 684 SHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDV 741
V I +S + S Y E + EAV P+ V L ++V
Sbjct: 628 DDQGIVRIDMSEYMEKHTVS-----RLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEV 682
Query: 742 EQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E+A + ++ GR+ G V+ + +VIL+
Sbjct: 683 EKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILTS 721
>gi|338708620|ref|YP_004662821.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336295424|gb|AEI38531.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 864
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 170/806 (21%), Positives = 308/806 (38%), Gaps = 129/806 (16%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
LT A ++ A T+A R H ++ P H+ +L ++GL+R A +
Sbjct: 6 LTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDEQGMASGLIRRAGGDPTIAVRETD 65
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
A AL+++P+ + + G P + N + +A Q + G
Sbjct: 66 A-------ALSKIPSVSGS----GANTPPGLDNDAIRLLDQAEQVATKAGDS-------- 106
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
V +E L +++L + +V +++++AG + + + + + +S + S E
Sbjct: 107 YVTVERLLLAMTLLPETTVGKILKDAGLKAEALNTAINEL-------RSGRTADTASAED 159
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ ++ L + K N V++GE +V
Sbjct: 160 RYDALKKFARDLTEAAREGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE LRD + L + S R E E+R++ + + V+ G+ I+L
Sbjct: 220 EGLALRIVNGDVPEGLRDRVLMALDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQ-IIL 278
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
+ ++ A S+ M+ G L+ +G T Y +
Sbjct: 279 FIDEMHTL-IGAGKSDGA-----------MDAGNLLKPALARGELHCIGATTLDEYRKYV 326
Query: 363 SGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGV----SWLLFEGEEE 418
P+L+ + P+ + +++ T S L+ +A GV + L+
Sbjct: 327 EKDPALQRRF--QPVYVGEPTVA----DTISILRGLKEKYEAHHGVRITDAALVSAATLS 380
Query: 419 NKQLT--CCADCSAKFEAEARS-LQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDS 475
N+ +T D + EA S L+ + SL + Q K E++A +D+ S
Sbjct: 381 NRYITNRFLPDKAIDLVDEAASRLRMEVDSKPEEIESLDRRIIQLKIEREALRKEDDEAS 440
Query: 476 GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVV 535
RD K + +Q SE T + K +D
Sbjct: 441 --RDRLKTLEHDLGDLEQQS--SELTARW----------------------KNEQDKIKA 474
Query: 536 EPKQSWREHHFLFSHEASDKS-----TSEPSLRLYIPEHKDLKQPLSSNRNSTPNS---- 586
E + + H + E +++S E S + IP+ L++ LS +N +
Sbjct: 475 EARLKEKLDHARIALEQAERSGDLTKAGELSYGI-IPQ---LEKQLSDAQNEAQGAMLRE 530
Query: 587 -TSSSDIMEMEY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRS 639
+S DI + V K E E L + + L K+V Q + V ++ V + R+
Sbjct: 531 EVTSQDIASIVSRWTGIPVDKMLEGEREKLVHMEDILGKRVIGQAEAVKAVSRAVRRSRA 590
Query: 640 GTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF 696
G R G F F G K ++ K LA +F V I +S F
Sbjct: 591 GLQDPNRPMGSF------------LFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEF 638
Query: 697 SSTRADSTEDSRNKRSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKR 754
A + Y E EAV P++V L ++VE+A +
Sbjct: 639 MEKHAVA-----RLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQ 693
Query: 755 AIESGRIVTSSGDEVSLGDAIVILSC 780
++ GR+ G V + +++L+
Sbjct: 694 VLDDGRLTDGQGRTVDFSNTLIVLTS 719
>gi|56552320|ref|YP_163159.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ZM4]
gi|384412584|ref|YP_005621949.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|56543894|gb|AAV90048.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ZM4]
gi|335932958|gb|AEH63498.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 864
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 163/796 (20%), Positives = 300/796 (37%), Gaps = 109/796 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT A ++ A T+A R H ++ P H+ +L G+ ++ P+
Sbjct: 6 LTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDDQGMASGLIRRAGGDPMIAVR--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL ++P+ + + G P + N V +A+ + V +E
Sbjct: 63 DTDAALAKIPSVSGS----GANTPPGLDNDTVRLLDQAEQIATKAGDSY-------VTVE 111
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L ++++ + V ++++++G + + + + + +S + + E L
Sbjct: 112 RLLLAMTLMPETQVGKILKDSGLKAEALNTAINEL-------RSGRTADTATAEDRYDAL 164
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 165 KKFARDLTAAAREGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIVEGLAL 224
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE LRD + L + S R E E+R++ + + V+ G+ I+L + ++
Sbjct: 225 RIVNGDVPEGLRDRVLMGLDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQ-IILFIDEM 283
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
A S+ M+ G L+ +G T Y + P+
Sbjct: 284 HTL-IGAGKSDGA-----------MDAGNLLKPALARGELHCIGATTLAEYQKYVEKDPA 331
Query: 368 LETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGV----SWLLFEGEEENKQLT 423
L+ + P+ + ++ T S L+ +A GV + L+ N+ +T
Sbjct: 332 LQRRF--QPVYVGEPTVE----DTISILRGLKEKYEAHHGVRITDAALVSAATLSNRYIT 385
Query: 424 --CCADCSAKFEAEARS-LQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDL 480
D + EA S L+ + +L + Q K E++A L ND S RD
Sbjct: 386 NRFLPDKAIDLVDEAASRLRMEVDSKPEEIENLDRRIIQLKIEREALLKENDDAS--RDR 443
Query: 481 CKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQS 540
+ + +Q SE T + + K D A + +Q+
Sbjct: 444 LATLEHDLSDLEQQS--SELTTRWKNEQDKIKAEARL---------KEKLDQARIALEQA 492
Query: 541 WREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNS-----TSSSDIMEM 595
R + E S IP+ L++ L+ +N+ + +S DI +
Sbjct: 493 ERSGDLTKAGEISYG---------IIPQ---LEKQLADAQNAAQGAMLREEVTSQDIASI 540
Query: 596 EY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKG 646
V K E E L + + L K+V Q+D V ++ V + R+G R G
Sbjct: 541 VSRWTGIPVDKMLEGEREKLIHMEDWLGKRVIGQEDAVKAVSRAVRRARAGLQDPSRPIG 600
Query: 647 KFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTED 706
F F G K ++ K LA +F V I +S + A +
Sbjct: 601 SF------------LFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEYMEKHAVA--- 645
Query: 707 SRNKRSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
Y E EAV P++V L ++VE+A + ++ GR+
Sbjct: 646 --RLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDG 703
Query: 765 SGDEVSLGDAIVILSC 780
G V + ++IL+
Sbjct: 704 QGRTVDFSNTLIILTS 719
>gi|397677499|ref|YP_006519037.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395398188|gb|AFN57515.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 864
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 163/796 (20%), Positives = 300/796 (37%), Gaps = 109/796 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT A ++ A T+A R H ++ P H+ +L G+ ++ P+
Sbjct: 6 LTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDDQGMASGLIRRAGGDPMIAVR--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL ++P+ + + G P + N V +A+ + V +E
Sbjct: 63 DTDAALAKIPSVSGS----GANTPPGLDNDTVRLLDQAEQIATKAGDSY-------VTVE 111
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L ++++ + V ++++++G + + + + + +S + + E L
Sbjct: 112 RLLLAMTLMPETQVGKILKDSGLRAEALNTAINEL-------RSGRTADTATAEDRYDAL 164
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 165 KKFARDLTAAAREGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIVEGLAL 224
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE LRD + L + S R E E+R++ + + V+ G+ I+L + ++
Sbjct: 225 RIVNGDVPEGLRDRVLMGLDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQ-IILFIDEM 283
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
A S+ M+ G L+ +G T Y + P+
Sbjct: 284 HTL-IGAGKSDGA-----------MDAGNLLKPALARGELHCIGATTLAEYQKYVEKDPA 331
Query: 368 LETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGV----SWLLFEGEEENKQLT 423
L+ + P+ + ++ T S L+ +A GV + L+ N+ +T
Sbjct: 332 LQRRF--QPVYVGEPTVE----DTISILRGLKEKYEAHHGVRITDAALVSAATLSNRYIT 385
Query: 424 --CCADCSAKFEAEARS-LQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDL 480
D + EA S L+ + +L + Q K E++A L ND S RD
Sbjct: 386 NRFLPDKAIDLVDEAASRLRMEVDSKPEEIENLDRRIIQLKIEREALLKENDDAS--RDR 443
Query: 481 CKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQS 540
+ + +Q SE T + + K D A + +Q+
Sbjct: 444 LATLEHDLSDLEQQS--SELTTRWKNEQDKIKAEARL---------KEKLDQARIALEQA 492
Query: 541 WREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNS-----TSSSDIMEM 595
R + E S IP+ L++ L+ +N+ + +S DI +
Sbjct: 493 ERSGDLTKAGEISYG---------IIPQ---LEKQLADAQNAAQGAMLREEVTSQDIASI 540
Query: 596 EY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKG 646
V K E E L + + L K+V Q+D V ++ V + R+G R G
Sbjct: 541 VSRWTGIPVDKMLEGEREKLIHMEDWLGKRVIGQEDAVKAVSRAVRRARAGLQDPSRPIG 600
Query: 647 KFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTED 706
F F G K ++ K LA +F V I +S + A +
Sbjct: 601 SF------------LFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEYMEKHAVA--- 645
Query: 707 SRNKRSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
Y E EAV P++V L ++VE+A + ++ GR+
Sbjct: 646 --RLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDG 703
Query: 765 SGDEVSLGDAIVILSC 780
G V + ++IL+
Sbjct: 704 QGRTVDFSNTLIILTS 719
>gi|297804822|ref|XP_002870295.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
gi|297316131|gb|EFH46554.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
Length = 920
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 141/322 (43%), Gaps = 50/322 (15%)
Query: 19 VVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALN 78
++ +A TLA H QVTPLH+ +++ TG+ A + L ++ AL
Sbjct: 13 ILAKARTLAIVSSHVQVTPLHLGVGLISDKTGVFYRAITTAGGSELLAQSAVKVIKQALK 72
Query: 79 RLPASTSTPMLGGHCQFPT----------ISNALVAAFKRAQAHQR------RGSIENQQ 122
+LP P G ++P+ ISN + + Q R +N
Sbjct: 73 KLPKQVPPPT-GAIPRYPSRKNLPKQTPPISNGAIPQYPGLNIPQNPIPFLTRTIPQNNA 131
Query: 123 QPLLAVK----------IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEIC 172
++ + + +E L+IS+LDD + +++EAG +VKS VE+ + E+
Sbjct: 132 SLVMVLNRAQTKPGETSVGVEALVISLLDDSQIRDLLKEAGSVPEKVKSEVEK-LGGEVN 190
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
Q+ K + ++ Q LDP+ R++++ V+ L + K N
Sbjct: 191 LQAL-------KTYGIDLVEQVGK----------LDPVIGRDKEIRRVVGILSRRTKNNP 233
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEI 288
V++GE VV G+ +I KGDVP L DVK L + + R + E+R++ +
Sbjct: 234 VLIGEPGVGKTAVVEGLAQRILKGDVPINLTDVKLFSLDLGAMVAGTTLRGQFEERLKSV 293
Query: 289 KNLVRSCLGRGIVLNLGDLEWA 310
V + G+ +VL + ++ A
Sbjct: 294 LKEVENAQGK-VVLFIDEIHMA 314
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 28/179 (15%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLFFQGV 665
L SL + L ++V Q + V +A +L+ R G R + G F F G
Sbjct: 590 LISLADRLHERVVGQDEAVKAVAAAILRSRVGLGRPQQPSGSF------------LFLGP 637
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--- 722
K ++AK LA +F N V + +S + D YI
Sbjct: 638 TGVGKTELAKALAEQLFYDENLLVRLDMSEYM--------DRSTVNKLIGAPPGYIGHEE 689
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+ E V P+ V L ++VE+A+ + +E GR+ S G V + ++I++
Sbjct: 690 GGQLTEPVRRRPYCVVLFDEVEKANVTVFNTLLQVLEDGRLTDSHGRTVDFKNTVIIMT 748
>gi|219939389|emb|CAM31939.1| heat shock protein-related [Arabidopsis thaliana]
gi|219939391|emb|CAM31940.1| heat shock protein-related [Arabidopsis thaliana]
Length = 249
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 40/248 (16%)
Query: 284 RVEEIKNLVRSCL------GRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHI-IMEIGK 336
R++E+ L+ + L G G++++LGDL+W + SS++ + ++E+ +
Sbjct: 8 RIKELDGLLETRLKISDPSGGGVIVDLGDLKWLVEQPSSTQPPATLAVEVGRTAVVELRR 67
Query: 337 LVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT-TDSDL 395
L+ R W +G AT ++Y+RC+ HPS+ET W L +++ A + + + ++L
Sbjct: 68 LLEKF--EGRLWFIGTATCETYLRCQVYHPSMETDWDLQAVSVAAKAPASGVFPRLANNL 125
Query: 396 QSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFE---AEARSLQSSSCNSD-SPTS 451
+S + K N+ L CC C +E AE S+ S S+ +
Sbjct: 126 ESFTPLKSFVPA-----------NRTLKCCPQCLQSYERELAEIDSVSSPEVKSEVAQPK 174
Query: 452 SLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQ---------PYYSERTL 502
LP WL KA + + + ++ KKWN C +H P TL
Sbjct: 175 QLPQWLL------KAKPVDRLPQAKIEEVQKKWNDACVRLHPSFHNKNERIVPIPVPITL 228
Query: 503 TFSSASPS 510
T S SP+
Sbjct: 229 TTSPYSPN 236
>gi|219668839|ref|YP_002459274.1| ATP-dependent chaperone ClpB [Desulfitobacterium hafniense DCB-2]
gi|219539099|gb|ACL20838.1| ATP-dependent chaperone ClpB [Desulfitobacterium hafniense DCB-2]
Length = 864
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 163/819 (19%), Positives = 304/819 (37%), Gaps = 155/819 (18%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + Q T+A R G++QV P H+ +L G++ L P AL
Sbjct: 8 FTQKSQEAIIQTQTMAERNGNSQVEPEHLLLALLEQGEGVV-PQVLTKLDIP--VGALVQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NRLP M+G + Q P + LV+A H + ++
Sbjct: 65 KVRQEVNRLPR-----MMGANVQLTISPRLRTVLVSA------HDEMETFKDDY------ 107
Query: 129 KIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+++IL +++++ G + ++ +L + + V+S ++ E
Sbjct: 108 -VSTEHLLLAILSQGGGPAEKILKQEGLNREKLLQ------ALRVVRGTQRVTS-QTPEG 159
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L Q R LDP+ R+E++ VI+ L K K N V++GE +V
Sbjct: 160 TFRALEQYGRNLVEQARRGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLS----ISSFRHMNRVEVEQRVEEIKNLVRSCLGRGI 300
G+ +I +GDVPE+++D K + L I+ ++ R E E+R++ + V+ I
Sbjct: 220 EGLAQRIVRGDVPESVKDKKIIALDMGSLIAGAKY--RGEFEERLKAVLKEVQER--EDI 275
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR 360
+L + +L A ++E M+ G ++ + ++G T Y +
Sbjct: 276 ILFIDELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELHMVGATTLDEYRK 323
Query: 361 --------------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDL 395
G PS+E S+ H + I G++ + + +D +
Sbjct: 324 YIEKDAALERRFQPVTVGAPSVEDTISILRGLKERYETHHGVRITDGAIIAAAVLSDRYI 383
Query: 396 QSQSTSKKA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSC-NSDSPT 450
+ KA + + + E + +L + E E +L+ S
Sbjct: 384 SDRFLPDKAIDLIDEAAARMRMEITSDPYELDQIKRRILQLEIEREALKKEKDEGSKERL 443
Query: 451 SSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPS 510
+ L K E+ A + + G R++ + NS+ I + E+
Sbjct: 444 EKIEEDLANLKEERSALEA---QLQGEREVLTRINSLKEDIDQNRLKMEQ---------- 490
Query: 511 SSTSGFSYDQ----QYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYI 566
+ F Y++ QY K ++ +E +Q + L E ++ +E
Sbjct: 491 -AQQAFDYNKAAELQYGILPKLEKELNALE-EQLRNRKNTLLKQEVGEEDIAE------- 541
Query: 567 PEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDT 626
+ + P V K E + L + + ++V Q++
Sbjct: 542 ---------VVAKWTQVP-------------VAKLLESEMDKLVHMEARIHQRVIGQEEA 579
Query: 627 VYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFG 683
V +A+ V + R+G R G F F G K ++AK LA +F
Sbjct: 580 VKAVADAVRRSRAGLQDPNRPLGSF------------LFLGPTGVGKTELAKALAEFLFD 627
Query: 684 SHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDV 741
V I +S + S Y E + EAV P+ V L ++V
Sbjct: 628 DDQGIVRIDMSEYMEKHTVS-----RLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEV 682
Query: 742 EQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
E+A + ++ GR+ G V+ + +VIL+
Sbjct: 683 EKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILTS 721
>gi|320167920|gb|EFW44819.1| heat shock protein 101 [Capsaspora owczarzaki ATCC 30864]
Length = 1008
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 43/287 (14%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
HA +TPLHVA + A GL R C ++ C E LNR P+ P
Sbjct: 25 AHAAMTPLHVAVALFADEDGLARAVCQRAGVDFTNC---ERALKRQLNRTPSQDPAP--- 78
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMR 150
S+AL+ + AQ QR+ Q LAV + L +++ +D V+ ++
Sbjct: 79 ---DQVAPSSALIKILRSAQTAQRK-----QSDSHLAV----DHLFMALFEDRQVAEALK 126
Query: 151 EAGFSSTQVKSNVEQAVSL-EICSQSTPVSSNK-SKESNVLVLSQTASATKVSKPRVSLD 208
E G + T + + V++ ++ S+S+ + + +K + LV A LD
Sbjct: 127 EGGLTQTALDAAVKEVRGKHKVESKSSDTAYDALAKYGHDLVADAEAG---------KLD 177
Query: 209 PI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR----- 261
P+ R++++ VI L + K N V++GE +V G+ +I +GDVP+ LR
Sbjct: 178 PVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKSAIVEGLAQRIVRGDVPDNLRCRLIS 237
Query: 262 -DVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
D+ L +S ++ R E E+R++ + V RG++L + ++
Sbjct: 238 LDMGAL---VSGAKY--RGEFEERLKAVLKEVEDS-DRGVILFIDEI 278
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 16/184 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
+ + + + + L +L +KV Q + V ++ +L+ R+G R E +
Sbjct: 596 ISRLNQSERDRVLHLAASLHRKVVGQDEAVDAVSEAILRTRAGLAR---------ENQPT 646
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF--SSTRADSTEDSRNKRSRDE 715
F G K ++AK LA +F + +S + + A DE
Sbjct: 647 GSFLFLGSTGTGKTQLAKALAEELFDDEKMLIRFDMSEYMEQHSVARLIGAPPGYIGHDE 706
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ E V P+ V L ++VE+A + ++ GR+ S G V+ + +
Sbjct: 707 GG-----QLTERVRRRPYSVVLFDEVEKAHPQVWNVLLQILDDGRLTDSQGRTVNFCNTV 761
Query: 776 VILS 779
+IL+
Sbjct: 762 IILT 765
>gi|154507941|ref|ZP_02043583.1| hypothetical protein ACTODO_00427 [Actinomyces odontolyticus ATCC
17982]
gi|153797575|gb|EDN79995.1| ATP-dependent chaperone protein ClpB [Actinomyces odontolyticus
ATCC 17982]
Length = 866
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 164/812 (20%), Positives = 309/812 (38%), Gaps = 131/812 (16%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T +A V A+ A G+ QV P+H+ ++ G+ A + +A+
Sbjct: 1 MTTKAQEAVSSALQAAGAAGNPQVEPIHLLEALIEQREGI---ALSLLEAVGADVRAIGA 57
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL LP++ G SNAL+A + A G + I
Sbjct: 58 RTRNALVALPSAQ-----GASAGSAQPSNALLAVVRDAGERAEAGGDQY---------IS 103
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L+I++ + R++ + G + + + Q + P++S + S +
Sbjct: 104 TEHLLIALAASQTEAGRILAQGGVEADALTQALAQL-------RPDPITSADPEGSFEAL 156
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
T+V++ LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 157 SKYGRDLTEVAR-EGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 215
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD + + L ++S R E E+R++ + + + G+ I+ + +
Sbjct: 216 QRIVAGDVPESLRDKRLVSLDVASMVAGAKYRGEFEERLKAVLSEISRSDGQ-IITFIDE 274
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY-------- 358
L SE M+ G ++ + ++G T Y
Sbjct: 275 LHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDP 323
Query: 359 ------MRCKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTS 401
+ G PS+E ++ H +TI G+L + ++ + +
Sbjct: 324 ALERRFQQVFVGEPSVEDTVAILRGIAPKYEAHHKVTISDGALVAAATLSNRYITGRQLP 383
Query: 402 KKAESGVSWLLFEGEEENKQLTCCADCS-AKFEAEARSLQSSSCNSDSPTSSLPAWLQQY 460
KA + +E +L D S + + RS+ T S P L +
Sbjct: 384 DKAIDLI-------DEAASRLRMELDSSPVEIDELRRSVDRLRMEESYLTESDPEGLDEA 436
Query: 461 KNEKKATLSNN--DKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSY 518
E+ + L + D++ +R L +W + + H + E + S
Sbjct: 437 TQERLSKLRADLADREESLRALTARWEA-EKAGHNR--VGELRVQLDSL----------- 482
Query: 519 DQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHE--ASDKSTSEPSLRLYIPEHKDLKQPL 576
+T D AV E + W E L + E A ++ +E + + + +P+
Sbjct: 483 --------RTQLDLAVREGR--WEEAGRLQNGEIPAVERQIAEAEAQAEEQDARSDDEPM 532
Query: 577 SSNRNSTPNSTSSSDIMEMEY---VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANT 633
+ + +D++E K + ++ L + + L K++ QKD V +++
Sbjct: 533 IAEKV---GPAEIADVIEAWTGIPTGKLLQTETDKLLHMEDELGKRLIGQKDAVRAVSDA 589
Query: 634 VLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVS 690
V + R+G R G F F G K ++AK LA +F V
Sbjct: 590 VRRSRAGLSDPNRPTGSF------------LFLGPTGVGKTELAKALAEFLFDDERAMVR 637
Query: 691 IALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCS 748
I +S +S + + Y + + EAV P+ V L+++VE+AD
Sbjct: 638 IDMSEYSEKHSVA-----RLVGAPPGYVGYEQGGQLTEAVRRRPYSVILLDEVEKADPEI 692
Query: 749 QKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ ++ GR+ G V + I+IL+
Sbjct: 693 FDILLQVLDDGRLTDGQGRTVDFRNTILILTS 724
>gi|260947490|ref|XP_002618042.1| hypothetical protein CLUG_01501 [Clavispora lusitaniae ATCC 42720]
gi|238847914|gb|EEQ37378.1| hypothetical protein CLUG_01501 [Clavispora lusitaniae ATCC 42720]
Length = 897
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 163/813 (20%), Positives = 304/813 (37%), Gaps = 141/813 (17%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA----STGLLRTACLQSHSHPLQCK 67
T A S++++A LA+ H+Q+ PLH M+ ST L+T +Q + +
Sbjct: 10 FTDNALSIIQRATELAKEGAHSQIVPLHFLAAMVPTDDENSTQYLKT-LIQKGRY--EWP 66
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N L +LP+ T P + + L+ + +A Q+ +
Sbjct: 67 DFERIVNRHLVKLPSQTPAP---DDVRLSYAAGQLLTNANKVKAQQKDSYVAQ------- 116
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ +++++LDD S+ + +EA QV + +++E+ + S K+ S+
Sbjct: 117 -----DHILLALLDDNSIKDIFKEA-----QVNVQTIKTLAIELRGNQR-IDSRKADSSS 165
Query: 188 VLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ K R +DP+ R E++ VI L + K N V++GE +V
Sbjct: 166 SYEYLEKYCEDLTEKAREGKIDPVIGREEEIRRVIRVLARRTKSNSVLIGEAGVGKTSIV 225
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
GV +I GDVP L + + L + + + E E+R++ +
Sbjct: 226 EGVAQRIVDGDVPGILANARLFALDLGALTAGAKYKGEFEERIKGV-------------- 271
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGK-----LVCGIGENARFWLMGIATFQS 357
LGD+E S E + + I H++M GK L+ + +G TF
Sbjct: 272 -LGDIE------KSKEMIILFIDEI-HMLMGDGKSDAANLLKPMLARGALHCIGATTFAE 323
Query: 358 YMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEE 417
Y + S + E + + +PA ++ T + L+ + GV L
Sbjct: 324 YRKFISKDGAFERRF--QKIDVPATTIP----ETVAILRGLQPRYEIHHGVRIL------ 371
Query: 418 ENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNN------ 471
+ L A ++++ RSL S+ + T++ A + K E+ L
Sbjct: 372 -DSALVTAAQLASRY-LTYRSLPDSAVDLIDETAATVAVQRDSKPEELDNLERQLHLLEV 429
Query: 472 -------DKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPN 524
DKD+ + + KQ ER + +++
Sbjct: 430 EINALERDKDAD----SASIERLEQAKRKQAELEERLIPLR--------------ERFQQ 471
Query: 525 FHKTHRDWAVVEPKQSWREHHFLFSHEASDK--STSEPSLRLY-IPEHK----------- 570
K H + ++ K E + +H+A + + S LR + IP+ K
Sbjct: 472 ERKGHDELIALKRKLDELE---VKAHDAERRRDNASAADLRYFAIPDVKKQIEELEVKVA 528
Query: 571 --DLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVY 628
D Q + +N ++ + V K + + L ++ L +V Q + V
Sbjct: 529 EEDATQSMLNNVVGADAVAETAARLTGIPVTKLTQAENAKLINMEKVLSSEVVGQGEAVK 588
Query: 629 DIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNF 688
++N V RSG + + F G+ K ++AK++A +F
Sbjct: 589 AVSNAVRLTRSGL----------ANPNQPASFLFLGLSGSGKTELAKKVAGFLFADERAM 638
Query: 689 VSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADY 746
+ I S + S Y E EAV P+ V L ++VE+A
Sbjct: 639 IRIDCSELGDKWSAS-----KLLGAAPGYVGYEEGGILTEAVLRRPYSVILFDEVEKAAP 693
Query: 747 CSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+ ++ GR+ +S G ++ + I+I++
Sbjct: 694 EVLTVLLQILDDGRVTSSQGKVINCSNCIIIMT 726
>gi|312194122|ref|YP_004014183.1| ATP-dependent chaperone ClpB [Frankia sp. EuI1c]
gi|311225458|gb|ADP78313.1| ATP-dependent chaperone ClpB [Frankia sp. EuI1c]
Length = 875
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + + A++ A G V PLH+ +LA G+ TA L + A+
Sbjct: 6 LTARSQEALASAISRATGDGSPLVDPLHLLTALLAQPEGIA-TALLTAAGT--SVDAIRQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP +T T P +S LV RA+ R E
Sbjct: 63 RAENAVGRLPHATGT-----SVSPPQLSRQLVTVLDRAEREAGRLGDEYTS--------- 108
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVE--QAVSLEICSQSTPVSSNKSKESNV 188
+E L+I++ ++ R + G ++ +++ VE + + + S+ P S ++ E
Sbjct: 109 VEHLVIALAEEGGEAGRTLTAGGATADRLRGAVETVRGGARRVTSRD-PEGSYRALEKYS 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L L++ A A K LDP+ R+ +V VI+ L + K N V++GE +V G
Sbjct: 168 LDLTERARAGK-------LDPVVGRDAEVRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ ++ GDVPE+LR + + L + S + R E E+R+ + N +R G+ I+ +
Sbjct: 221 LAQRVVAGDVPESLRGRRIVSLDLGSMVAGSKFRGEFEERLTSVLNEIREAEGQ-IITFI 279
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A ++E M+ G ++ + ++G T Y +
Sbjct: 280 DELHTV-VGAGAAEGS-----------MDAGNMLKPMLARGELRMIGATTLDEYRKHIEK 327
Query: 365 HPSLE 369
P+LE
Sbjct: 328 DPALE 332
>gi|92116299|ref|YP_576028.1| ATPase [Nitrobacter hamburgensis X14]
gi|91799193|gb|ABE61568.1| ATPase AAA-2 [Nitrobacter hamburgensis X14]
Length = 878
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 31/294 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q TPLH+ +L S GL + ++ + +A+ ALN+
Sbjct: 14 IQSAQSLAVREGHQQFTPLHILKVLLDDSEGLAGSLIDRAGGN---SRAILKATEAALNK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI--I 137
+P S G P + A AA QA ++ G + +E+L+ +
Sbjct: 71 MP-KVSGAGAGQIYLAPATARAFDAA---EQAAEKAGD----------SFVTVERLLQAL 116
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
S+ D +++++ G + + + + +T ++ + + L+Q A
Sbjct: 117 SLDKDSDAFKLLKDGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
K LDP+ R+E++ I+ L + K N V++GE + G+ +I GD
Sbjct: 177 GK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 229
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
VPE+L+D K L L + S R E E+R++ + V S G GIVL + ++
Sbjct: 230 VPESLKDKKLLALDLGSLIAGAKYRGEFEERLKAVLQEVTSAAG-GIVLFIDEM 282
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + +++A +LA R H Q+ P+H+ L G+ R ++ ++ AL
Sbjct: 6 LTTKFQQALQEAQSLALARDHQQMEPVHLLLAFLDQDGGIARPLLAKAG---VRVDALRN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
AL LP P G Q + N L A K AQ +RG I
Sbjct: 63 ALGRALESLPKVEGVP---GEVQMGRDLGNLLNLADKIAQ---KRGD----------SYI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E ++++L+D R+ +EAG SS ++ V++ E + ++ E L
Sbjct: 107 STEHFLLALLEDRGEAGRLFKEAGASSKDLEQAVQELHGGEKINDPNAEEQRQALEKYTL 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
++ A+ K LDP+ R++++ I+ L+ + K N V++GE +V G+
Sbjct: 167 DYTERAAQGK-------LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+LR + L L + + R E E+R++ + N + G+ I+
Sbjct: 220 AQRIVNGEVPESLRGKRLLGLDLGALIAGAKFRGEFEERLKALLNDLAKAEGKIILF 276
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 23/216 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L +V Q + V +AN + + R+G R G F
Sbjct: 552 VSKMLEGEKEKLLKMEERLRARVVGQDEAVTAVANAIRRSRAGLADPRRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S ++ V I +S F + +
Sbjct: 606 ------LFLGPTGVGKTELTKALAEFLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVG 659
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 660 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNT 716
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAME 810
+++++ S R + + E +GA ME
Sbjct: 717 VIVMTSNLGSDRIQEYG-----RLGDVEGMRGAVME 747
>gi|167569691|ref|ZP_02362565.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis C6786]
Length = 865
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALIAQQDGSARALLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ R+ G + ++S V + S ++ + +
Sbjct: 108 SEMFLLAVADDRGEAGRLARQHGLTRKALESAVAAVRGGSQVHSADAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|167562511|ref|ZP_02355427.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
oklahomensis EO147]
Length = 865
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALIAQQDGSARALLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ R+ G + ++S V + S ++ + +
Sbjct: 108 SEMFLLAVADDRGEAGRLARQHGLTRKALESAVAAVRGGSQVHSADAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|367467947|ref|ZP_09467857.1| ClpB protein [Patulibacter sp. I11]
gi|365817002|gb|EHN11990.1| ClpB protein [Patulibacter sp. I11]
Length = 871
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 31/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + +A LA RR + QVTP H+ +LA G + LQ P++ + L
Sbjct: 6 FTIKTQEALAEAGQLAERRRNPQVTPEHLLLVLLAQEGGTV-GPVLQKLGVPVEQ--VRL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A++ LP +T GG P S+ LVA RGS E Q + L +
Sbjct: 63 PVQAAIDALPTTTG----GGQAAGP--SSELVAVL--------RGS-EEQMRTLGDEYLS 107
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++++ D +R G + ++ V + + P E
Sbjct: 108 TEHVLLALAGHDSKAGDALRAVGATPEALEPAVTEVRGSHKVTDQNP-------EDKFQA 160
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + + + LDP+ R+E++ VI+ L +RK N V++GE +V G+
Sbjct: 161 LQRFGQDLTEAAAKGELDPVIGRDEEIRRVIQVLSRRRKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD + + L I S R E E R++ + V G+ IV+ + +
Sbjct: 221 QRIVSGDVPESLRDRRVVSLDIGSMLAGAKYRGEFEDRLKAVLKEVADARGQ-IVMFIDE 279
Query: 307 L 307
L
Sbjct: 280 L 280
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 22/197 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L +V Q+D V ++ + + R+G R G F
Sbjct: 552 VARLLEGEVEKLVHMEDRLHDRVIGQEDAVSAVSAAIRRSRAGLGDPDRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F S + V I +S + A S
Sbjct: 606 ------LFLGPTGVGKTELARALAEFLFDSQDAMVRIDMSEYMEKHAVS-----RLVGAP 654
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYDEGGQLTEAVRRRPYSVILLDEVEKAHPDVFNILLQLLDDGRLTDGHGRTVDFT 714
Query: 773 DAIVILSCESFSSRSRA 789
+++++L+ R+ A
Sbjct: 715 NSVLVLTSNIPGGRAGA 731
>gi|293188976|ref|ZP_06607709.1| ATP-dependent chaperone protein ClpB [Actinomyces odontolyticus
F0309]
gi|292822078|gb|EFF81004.1| ATP-dependent chaperone protein ClpB [Actinomyces odontolyticus
F0309]
Length = 866
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 161/809 (19%), Positives = 305/809 (37%), Gaps = 125/809 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T +A V A+ A G+ QV P+H+ ++ G+ A + +A+
Sbjct: 1 MTTKAQEAVSSALQAAGAAGNPQVEPIHLLEALIEQREGI---ALSLLEAVGADVRAIGA 57
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL LP++ G SNAL+A + A G + I
Sbjct: 58 RTRNALVALPSAQ-----GASAGSAQPSNALLAVVRDAGERAEAGGDQY---------IS 103
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L+I++ + R++ + G + + + Q + P++S + S +
Sbjct: 104 TEHLLIALAASQTEAGRILAQGGVEADALTQALAQL-------RPDPITSADPEGSFEAL 156
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
T+V++ LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 157 SKYGRDLTEVAR-EGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 215
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD + + L ++S R E E+R++ + + + G+ I+ + +
Sbjct: 216 QRIVAGDVPESLRDKRLVSLDVASMVAGAKYRGEFEERLKAVLSEISRSDGQ-IITFIDE 274
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY-------- 358
L SE M+ G ++ + ++G T Y
Sbjct: 275 LHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDP 323
Query: 359 ------MRCKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTS 401
+ G PS+E ++ H +TI G+L + ++ + +
Sbjct: 324 ALERRFQQVFVGEPSVEDTVAILRGIAPKYEAHHKVTISDGALVAAATLSNRYITGRQLP 383
Query: 402 KKAESGVSWLLFEGEEENKQLTCCADCS-AKFEAEARSLQSSSCNSDSPTSSLPAWLQQY 460
KA + +E +L D S + + RS+ T S P L +
Sbjct: 384 DKAIDLI-------DEAASRLRMELDSSPVEIDELRRSVDRLRMEESYLTESDPEGLDEA 436
Query: 461 KNEKKATLSNN--DKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSY 518
E+ + L + D++ +R L +W + + H + E + S
Sbjct: 437 TQERLSKLRADLADREESLRALTARWEA-EKAGHNR--VGELRVQLDSL----------- 482
Query: 519 DQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHE--ASDKSTSEPSLRLYIPEHKDLKQPL 576
+T D AV E + W E L + E A ++ +E + + + +P+
Sbjct: 483 --------RTQLDLAVREGR--WEEAGRLQNGEIPAVERQIAEAEAQAEEQDARSDDEPM 532
Query: 577 SSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLK 636
+ + + K + ++ L + + L K++ QK+ V +++ V +
Sbjct: 533 IAEKVGPAEIAEVIEAWTGIPTGKLLQTETDKLLHMEDELGKRLIGQKEAVRAVSDAVRR 592
Query: 637 CRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIAL 693
R+G R G F F G K ++AK LA +F V I +
Sbjct: 593 SRAGLSDPNRPTGSF------------LFLGPTGVGKTELAKALAEFLFDDERAMVRIDM 640
Query: 694 SSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKG 751
S +S + + Y + + EAV P+ V L+++VE+AD
Sbjct: 641 SEYSEKHSVA-----RLVGAPPGYVGYEQGGQLTEAVRRRPYSVVLLDEVEKADPEIFDI 695
Query: 752 FKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ ++ GR+ G V + I+IL+
Sbjct: 696 LLQVLDDGRLTDGQGRTVDFRNTILILTS 724
>gi|296447416|ref|ZP_06889341.1| ATP-dependent chaperone ClpB [Methylosinus trichosporium OB3b]
gi|296255036|gb|EFH02138.1| ATP-dependent chaperone ClpB [Methylosinus trichosporium OB3b]
Length = 871
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A++LA R G+ Q+ P HV +L S GL+ A +S + +A
Sbjct: 7 TTRAQGFVQAALSLATREGNPQLQPEHVLKVLLDDEQGLSAGLIDRAGGRSREALAKTEA 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLL 126
AL +LP + GG P ++ A F A+ A + S ++ LL
Sbjct: 67 -------ALAKLPKVS-----GGGAGQPQLAQATARLFDNAEKIAQKAGDSYVTVERLLL 114
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A+ +E +R++ E+G + + + +E S+ S+ + +
Sbjct: 115 AIALE---------KGTEAARILSESGVTPQTLSATIEDLRKGRTADSSSAESAYDALKK 165
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L++ A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 166 YARDLTEAAREGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIV 218
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+L D K L L + + R E E+R++ + + + + G GI+L
Sbjct: 219 EGLALRIVNGDVPESLEDKKLLALDMGALIAGAKYRGEFEERLKAVLSEITAAQG-GIIL 277
Query: 303 NLGDL 307
+ ++
Sbjct: 278 FIDEM 282
>gi|86751350|ref|YP_487846.1| ATPase AAA [Rhodopseudomonas palustris HaA2]
gi|86574378|gb|ABD08935.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2]
Length = 879
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 33/295 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
V+ A +LA R GH Q +PLH+ +L S GL +S + +A+ AL +
Sbjct: 14 VQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRSGGN---SRAILKATEDALGK 70
Query: 80 LPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
+P + + G Q P + AL A QA ++ G V +E L
Sbjct: 71 MPKVSGS----GAGQVYLAPATARALDGA---EQAAEKAGDS--------FVTVERLLLA 115
Query: 137 ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
+S+ D +++ + G + + + + +T ++ + + L+Q A
Sbjct: 116 LSLDKDSEAGQLLAKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAAR 175
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
K LDP+ R+E++ I+ L + K N V++GE +V G+ +I G
Sbjct: 176 DGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
DVPE+L+D K L L + + R E E+R++ + N V + G GIVL + ++
Sbjct: 229 DVPESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAAG-GIVLFIDEM 282
>gi|126139499|ref|XP_001386272.1| hypothetical protein PICST_85379 [Scheffersomyces stipitis CBS
6054]
gi|126093554|gb|ABN68243.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 902
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 123/287 (42%), Gaps = 31/287 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA----STGLLRTACLQSHSHPLQCK 67
T A ++ A LA+ HAQ+ PLH+ M+ + ST L+T + +
Sbjct: 6 FTDNALKIITSAQQLAKDNAHAQLLPLHMLAAMVPSDDPESTVYLKTLIQKGR---FEWP 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N L RLP+ T P + + ++ Q R +I+ QQ+
Sbjct: 63 TFERTVNKHLVRLPSQTPAP------------DEVRPSYAAGQVLTRANNIKAQQKDSYV 110
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ + +++++L+D S+ + +EAG +K + +A ++E+ S S
Sbjct: 111 AQ---DHILLALLEDQSIKDIFKEAG-----IKVDAVKAAAIELRGNQRIDSRQADSSST 162
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ +DP+ R E++ VI L + K N V+VGE +V
Sbjct: 163 YEFLNKYCEDLTEKAREGRIDPVIGREEEIRRVIRVLARRTKSNSVLVGEAGVGKTSIVE 222
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKN 290
GV +I GDVP L++ + L + + + E E+R++ + N
Sbjct: 223 GVAQRIIDGDVPGVLQNSRLFALDLGALTAGAKYKGEFEERIKGVLN 269
>gi|431793874|ref|YP_007220779.1| ATP-dependent chaperone ClpB [Desulfitobacterium dichloroeliminans
LMG P-21439]
gi|430784100|gb|AGA69383.1| ATP-dependent chaperone ClpB [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 866
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 160/812 (19%), Positives = 304/812 (37%), Gaps = 141/812 (17%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + QA T+A R G+ QV P H+ +L G++ L + P+ A ++
Sbjct: 8 FTQKSQEAIIQAQTMAERNGNGQVEPEHLLLALLEQGEGVV-PQVLTKLNIPVGVLAQKV 66
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ R P T T Q TIS+ L AH + +++ +
Sbjct: 67 RQDI--QRFPRMTGTS-----VQL-TISSRLRTVL--VSAHDEMETFKDEY-------VS 109
Query: 132 LEQLIISILD--DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L+++IL+ + +++++ G + ++ + + + + TP E
Sbjct: 110 TEHLLLAILEKGEGGAEKLLKQEGLNREKLLQVLREIRGTQRVTSQTP-------EGTFQ 162
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L Q R LDP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 163 ALEQYGRNLVEQARRGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGL 222
Query: 248 IDKIEKGDVPEALRDVKC----LPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGR-GIVL 302
+I +GDVPE+++D K + L I+ ++ R E E+R +K +++ R I+L
Sbjct: 223 SQRIVRGDVPESVKDKKVINLDMGLLIAGAKY--RGEFEER---LKAVLKEVQEREDIIL 277
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR-- 360
+ +L A ++E M+ ++ + ++G T + Y +
Sbjct: 278 FIDELHTV-VGAGAAEGA-----------MDASNMLKPMLARGELHMVGATTLEEYRKYI 325
Query: 361 ------------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQS 397
G PS+E S+ H + I G++ + I +D +
Sbjct: 326 EKDAALERRFQPVMVGAPSVEDTISILRGLKERYETHHGVRITDGAIISAAILSDRYISD 385
Query: 398 QSTSKKA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSL 453
+ KA + + L E + +L + E E +L+ D L
Sbjct: 386 RFLPDKAIDLVDEAAARLRMEITSDPYELDQIKRRVLQLEIEREALKKEK--DDGSKDRL 443
Query: 454 PAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSST 513
+ N K+ + + G R++ N + I ++T T + +
Sbjct: 444 AKIEEDLANLKEERGALEAQLQGEREVLTNINKLKEEI-------DQTRTKMEQAQQTYD 496
Query: 514 SGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLK 573
+ + QY K +D +E + R++ L E ++ +E
Sbjct: 497 YNKAAELQYGILPKLEKDLNTLEEQLQTRKNTLL-KQEVGEEDIAE-------------- 541
Query: 574 QPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANT 633
+ + P V K E + L + + ++V Q++ V +A+
Sbjct: 542 --VVAKWTQVP-------------VTKLLESEMDKLVHMEERIHERVIGQEEAVKAVADA 586
Query: 634 VLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVS 690
V + R+G R G F F G K ++AK LA +F V
Sbjct: 587 VRRARAGLQDPNRPLGSF------------LFLGPTGVGKTELAKALAEFLFDDDQGIVR 634
Query: 691 IALSSF--SSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCS 748
I +S + T A +E + EAV P+ V L ++VE+A
Sbjct: 635 IDMSEYMEKHTVARLIGAPPGYVGYEEGG-----QLTEAVRRKPYSVVLFDEVEKAHGDV 689
Query: 749 QKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ ++ GR+ G V+ + +VIL+
Sbjct: 690 FNVLLQLLDDGRLTDGQGRVVNFKNTVVILTS 721
>gi|407476337|ref|YP_006790214.1| chaperone protein ClpB [Exiguobacterium antarcticum B7]
gi|407060416|gb|AFS69606.1| Chaperone protein ClpB [Exiguobacterium antarcticum B7]
Length = 857
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 154/363 (42%), Gaps = 44/363 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT A + A +A++R H+++T H+ ++++ G+ R + + LE+
Sbjct: 6 LTDRAHEAIISAQAIAKQRRHSEITEWHLLLSLISQEEGIARIVFEKLDQ---RMDQLEV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLPA G P ISN+L+ A+ R Q ++V
Sbjct: 63 AINEAIGRLPAL-------GQSSTPRISNSLLQVLTEAETEARL-----MQDDYVSV--- 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L++ ++ S ++ +R G + ++ + I + + K+ E+ V
Sbjct: 108 -EHLLLGLVKQSSPATQYLRSQGVTEPLLREAI-------IEMRGNRKVTTKNPEATFDV 159
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + DP+ R++++ VI L K K N V++GE +V G+
Sbjct: 160 LKKYGRDLVADFRSGKTDPVIGRDDEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I +GDVPE+L++ + L +S+ R E E+R++ + N V+ G+ I+L + +
Sbjct: 220 QRIVRGDVPESLKNKQLFSLDMSTLVAGAKYRGEFEERLQAVLNEVKEAEGQ-ILLRVDE 278
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
L A +E M+ G ++ + +G T Y + P
Sbjct: 279 LHTI-VGAGKTEGA-----------MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDP 326
Query: 367 SLE 369
+LE
Sbjct: 327 ALE 329
>gi|408692410|gb|AFU82555.1| heat shock protein, partial [Artemisia tridentata]
Length = 137
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 18/141 (12%)
Query: 26 LARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQC-KALELCFNVALNRLPAST 84
LA GHAQ+TPLHVA +++ + R A S++ ++ + E FN AL +LP+ +
Sbjct: 2 LAMEAGHAQITPLHVAAVLISDPNDIFRQAV--SNAGGVEAGNSAERVFNQALKKLPSQS 59
Query: 85 STPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPS 144
P Q P SN+L+ + AQ Q++ + ++QLI+ +L D
Sbjct: 60 PAP-----DQIPA-SNSLITVIRNAQKLQKKSG---------DTHLAVDQLILGLLQDSQ 104
Query: 145 VSRVMREAGFSSTQVKSNVEQ 165
++ +M+EAG S+++VK+ VE+
Sbjct: 105 IADLMKEAGVSASRVKTEVEK 125
>gi|167836362|ref|ZP_02463245.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|424903869|ref|ZP_18327382.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
gi|390931742|gb|EIP89143.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis MSMB43]
Length = 865
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSSRSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DREAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGDAGRLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|384253238|gb|EIE26713.1| heat shock protein [Coccomyxa subellipsoidea C-169]
Length = 886
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 28/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + A LA+ H QVTP+H A + G+ + A L++ S+ +++
Sbjct: 6 FTQKTIETLNNAQELAQENAHQQVTPVHAAIKLFEDPEGIAKQAILRN-SNEETLRSILR 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
N L RLP+ P +F + L +A KRA+ Q S +
Sbjct: 65 VLNKKLVRLPSVDPPP---DQAEFSNEMRKVLQSAVKRAK--QNNDSF-----------M 108
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
++ L+ ++LD+ V+ + EAG S K+ +E A+S S T + ++ L+
Sbjct: 109 GVDALLKALLDNKDVAAALSEAGTS----KAQLESALSDVRGSGGTVDTDTGDQKFEALL 164
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
T K ++ LDP+ R+E++ ++ L + K N V++G+ +V G+
Sbjct: 165 KYGTDLTAKAAQ----LDPVIGRDEEIRRIVRILCRRTKNNPVLIGDPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I KGDVPE L+ ++ + L + +
Sbjct: 221 QRIVKGDVPEVLKGMRVISLDMGAL 245
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + + + E L L L K+V Q V +A+ V++ R+G S
Sbjct: 546 VSRLQTSDRERLLHLAEQLHKRVVGQDQAVDVVASAVMRSRAGL----------SSRSRG 595
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF--SSTRADSTEDSRNKRSRDE 715
+ F G K ++AK LA L+F + + +S + T A DE
Sbjct: 596 SSFLFLGPTGVGKTELAKALAELLFDDEKMMIRLDMSEYMEKHTVARLIGAPPGYIGHDE 655
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV +P+ V L+++VE+A ++ GR+ + G VS + +
Sbjct: 656 GG-----QLTEAVRRHPYSVVLLDEVEKAHREVMNILLGVLDDGRLTDAKGRTVSFANTV 710
Query: 776 VILS 779
+IL+
Sbjct: 711 IILT 714
>gi|197103260|ref|YP_002128638.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
gi|196480536|gb|ACG80063.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
Length = 868
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 135/305 (44%), Gaps = 36/305 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T A +++ A ++A R H ++ P H+ +L + GL+R+A + L +
Sbjct: 6 FTDRAKGMLQAAQSVAVRHNHQRIAPEHILKALLEDPEGMAAGLIRSA---GGTPELAGR 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
+ + AL +LPA T G Q P + N + +A Q Q+ G
Sbjct: 63 EI----DTALGKLPAVTGA----GASQPPGLDNDAIRLLDQAEQVAQKAGDS-------- 106
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
V +E L ++I + RV+ AG + ++ + +T ++ +
Sbjct: 107 FVTVERLLLAMAIATSSTAGRVLSAAGVKPEALSKAIDALRGGRVADTATAEDRYEALKK 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L++ A A K LDP+ R+E++ ++ L + K N V++G+ +V
Sbjct: 167 YARDLTEAARAGK-------LDPVIGRDEEIRRTVQILARRTKNNPVLIGDPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP+ LRD K + L + + R E E+R++ + + V+ G GI+L
Sbjct: 220 EGLAIRIANGDVPDTLRDRKLMALDMGALIAGAKYRGEFEERLKGVLDEVKGAEG-GIIL 278
Query: 303 NLGDL 307
+ ++
Sbjct: 279 FIDEM 283
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD-HSEVKE 656
V K E E L + AL K+V Q + ++ V + R+G KD H +
Sbjct: 549 VDKMLEGEREKLIHMEEALGKRVIGQSHAISAVSKAVRRARAG-------LKDPHRPLG- 600
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
++LF G K ++ K LA +F V I +S F A +
Sbjct: 601 -SFLFL-GPTGVGKTELTKALAGFLFDDDTAMVRIDMSEFMEKHAVA-----RLIGAPPG 653
Query: 717 SCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y E EAV P++V L ++VE+A + ++ GR+ G V +
Sbjct: 654 YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHNDVFNVLLQVLDDGRLTDGQGHTVDFSNT 713
Query: 775 IVILSC 780
++IL+
Sbjct: 714 LIILTS 719
>gi|172056511|ref|YP_001812971.1| ATP-dependent chaperone ClpB [Exiguobacterium sibiricum 255-15]
gi|171989032|gb|ACB59954.1| ATP-dependent chaperone ClpB [Exiguobacterium sibiricum 255-15]
Length = 857
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 44/363 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT A + A +A++R H+++T H+ +L+ G+ R + + LE
Sbjct: 6 LTDRAHEAIVSAQAIAKQRRHSEITEWHLLLALLSQEEGIARIVFEKLDQ---RIDQLET 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N AL RLPA G P ISN+L+ A+ R Q ++V
Sbjct: 63 GVNEALGRLPAL-------GQSSTPRISNSLLQVLTEAETEARL-----MQDDYVSV--- 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L++ ++ S ++ +R G + ++ + I + + K+ E+ V
Sbjct: 108 -EHLLLGLVKQSSPATQYLRNEGVTEQVLREAI-------IEMRGNRKVTTKNPEATFDV 159
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + DP+ R++++ VI L K K N V++GE +V G+
Sbjct: 160 LKKYGRDLVADFRSGKTDPVIGRDDEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I +GDVPE+L++ + L +S+ R E E+R++ + N V+ G+ I+L + +
Sbjct: 220 QRIVRGDVPESLKNKQLFSLDMSTLVAGAKYRGEFEERLQAVLNEVKEAEGQ-ILLFIDE 278
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
L A +E M+ G ++ + +G T Y + P
Sbjct: 279 LHTI-VGAGKTEGA-----------MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDP 326
Query: 367 SLE 369
+LE
Sbjct: 327 ALE 329
>gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX]
gi|71914336|gb|AAZ54238.1| ATPase [Thermobifida fusca YX]
Length = 867
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 21 KQAMTLARRR----GHAQVTPLHVANTMLAASTGLLRTACLQSHSHP--LQCKALELCFN 74
++A++ A RR G+ QV P+H+ + ++ + G++R + + P L K E
Sbjct: 10 QEALSAAIRRATADGNPQVEPVHLLSALIGQAEGVVRPLLKEVGADPGRLSTKVEE---- 65
Query: 75 VALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQ 134
+ RLP ++ G P S L+ + A QR +E++ + E
Sbjct: 66 -EIARLPRAS-----GSTVNAPASSRQLIISLN--TAAQRAKQMEDEY-------VSTEH 110
Query: 135 LIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQ 193
L++ + D + + ++REAG + + + + TP + ++ E + L+Q
Sbjct: 111 LLVGLAADGGTAATLLREAGATPEALLDAFSRVRGSARVTSETPEDTYQALEKYGVDLTQ 170
Query: 194 TASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKI 251
A K LDP+ R+ ++ VI+ L + K N V++GE VV G+ +I
Sbjct: 171 RAREGK-------LDPVIGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 223
Query: 252 EKGDVPEALRDVKC----LPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
GDVPE+LRD + LP ++ ++ R E E+R++ + N ++ G+ I+ + +L
Sbjct: 224 VAGDVPESLRDKRLISLDLPAMVAGAKY--RGEFEERLKAVLNEIKQSEGQ-IITFIDEL 280
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
A ++E M+ G ++ + ++G T Y P+
Sbjct: 281 HTV-VGAGAAEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPA 328
Query: 368 LETLWSLHPLTIPAGSLSLSLI 389
LE + + P+ + +++++
Sbjct: 329 LERRFQQVMVNEPSAADTIAIL 350
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E S L + + K++ Q+ V +++ V + R+G R G F
Sbjct: 550 VGRLMEGESAKLLRMEEEIGKRLIGQRRAVAAVSDAVRRARAGISDPDRPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V + +S +S + +
Sbjct: 604 ------LFLGPTGVGKTELAKALAEFLFDDERAIVRLDMSEYSEKHSVA-----RLVGAP 652
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G +V
Sbjct: 653 PGYVGYEEGGQLTEAVRRRPYTVVLLDEVEKAHIEVFDTLLQVLDDGRLTDGQGRQVDFR 712
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 713 NTLLILTS 720
>gi|83719137|ref|YP_442726.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|167581671|ref|ZP_02374545.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis TXDOH]
gi|167619788|ref|ZP_02388419.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis Bt4]
gi|257138938|ref|ZP_05587200.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
gi|83652962|gb|ABC37025.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
thailandensis E264]
Length = 865
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALIAQQDGSARSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|383768114|ref|YP_005447097.1| chaperone ClpB [Phycisphaera mikurensis NBRC 102666]
gi|381388384|dbj|BAM05200.1| chaperone ClpB [Phycisphaera mikurensis NBRC 102666]
Length = 874
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 30/303 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + V+ A +LA RGH H+A ++ GL+ L+ + P A EL
Sbjct: 6 LTEKSRAAVQAAQSLAVSRGHQPADAEHLALALVEQPDGLV-PRLLEKMNRPPATVAGEL 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+ P S S P G + +S A A ++AQA E +
Sbjct: 65 --KRMLDAKP-SVSGP--GSNPANAGVSQAFAQALEKAQASATAMGDEF---------VS 110
Query: 132 LEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++ +LD P+ V +R+ G T +S V++ + + P ++ ++
Sbjct: 111 VEHLVLGLLDLPAGNPVRSALRDLGIDETAWRSVVKELRGNQKVTTDNPEATYEALAKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A K LDP+ R+E++ I L K K N V++GE +V G
Sbjct: 171 QDLVELAKTGK-------LDPVIGRDEEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I +GDVP+ LRD L + + R E E+R++ + N V+ GR I+L +
Sbjct: 224 LAQRIVRGDVPDDLRDKTVFSLDMGALIAGAKYRGEFEERLKAVLNEVKGAEGR-ILLFI 282
Query: 305 GDL 307
+L
Sbjct: 283 DEL 285
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L L L ++V Q + V +A+ VL+ R+G R G F
Sbjct: 561 VARLVEGEREKLLKLDEVLHERVIGQDEAVTRVADAVLRARAGIKDPDRPIGSF------ 614
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +F S +N V I +S + A S
Sbjct: 615 ------IFLGPTGVGKTELSKALAEALFDSEDNLVRIDMSEYMEKHAVS-----RLIGAP 663
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A + ++ GR+ S G V+
Sbjct: 664 PGYIGYDEGGQLTEAVRRKPYCVILFDEIEKAHPDVFNVLLQLLDDGRLTDSQGRTVNFK 723
Query: 773 DAIVILS 779
+ +VI++
Sbjct: 724 NTVVIMT 730
>gi|430742429|ref|YP_007201558.1| ATP-dependent chaperone ClpB [Singulisphaera acidiphila DSM 18658]
gi|430014149|gb|AGA25863.1| ATP-dependent chaperone ClpB [Singulisphaera acidiphila DSM 18658]
Length = 884
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 33/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ V++A LA+ RGH ++ P+H+ +L G++R+ Q +P Q L
Sbjct: 8 LTLKSQEAVQRAQELAKERGHQRLEPMHLLAALLDPDQGVIRSLLTQLGINPGQ---LLK 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
LN LP + GG T+ L F AQ R E +
Sbjct: 65 ATGEGLNALPKVS-----GGET---TLGPDLSRVFDVAQEEADRMKDEF---------VS 107
Query: 132 LEQLIISILDDPSVSRVMREA-GFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++ ++ ++ + EA G + + +++ + + P ++ E
Sbjct: 108 VEHLLLGLIKVKGKAQSLLEAMGITEKDILQALQKVRGGQRVTDQNPDDKYQALEKYGRD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A K +DP+ R+ ++ V++ L + K N V++GE +V G+
Sbjct: 168 LVELARKGK-------MDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+L+D K + L + S R E E+R++ I V GR I+L + +
Sbjct: 221 QRIVSGDVPESLKDRKVIALDMGSLVAGTKFRGEFEERLKAILKDVTESEGR-IILFIDE 279
Query: 307 L 307
L
Sbjct: 280 L 280
>gi|75674787|ref|YP_317208.1| ATPase AAA [Nitrobacter winogradskyi Nb-255]
gi|74419657|gb|ABA03856.1| AAA ATPase [Nitrobacter winogradskyi Nb-255]
Length = 891
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 31/294 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q TPLH+ +L S GL + ++ + +A+ AL++
Sbjct: 27 IQSAQSLAMREGHQQFTPLHILKVLLDDSEGLAGSLIDRAGGN---SRAILKATEAALDK 83
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
+P S G P + A AA QA + G + +E+L+ S+
Sbjct: 84 MP-KVSGAGAGQIYLAPATARAFDAA---EQAAGKAGD----------SFVTVERLLQSL 129
Query: 140 -LD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
LD D +++++ G + + + + +T ++ + + L+Q A
Sbjct: 130 SLDADSDAFKLLKDGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARE 189
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
K LDP+ R+E++ I+ L + K N V++GE + G+ +I GD
Sbjct: 190 GK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 242
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
VPE+L+D K L L + S R E E+R++ + V S G GIVL + ++
Sbjct: 243 VPESLKDKKLLALDLGSMIAGAKYRGEFEERLKAVLQEVTSADG-GIVLFIDEM 295
>gi|414165245|ref|ZP_11421492.1| chaperone ClpB [Afipia felis ATCC 53690]
gi|410883025|gb|EKS30865.1| chaperone ClpB [Afipia felis ATCC 53690]
Length = 878
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 35/291 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q +PLH+ +L S GL ++ + +A+ AL +
Sbjct: 14 IQSAQSLALREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN---SRAILQATEQALAK 70
Query: 80 LPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAVKIELEQL 135
LP + GG Q P + A AA QA ++ G S ++ LLA+ ++
Sbjct: 71 LPKVSG----GGAGQIYLAPETARAFTAA---EQAAEKAGDSFVTVERLLLALTLD---- 119
Query: 136 IISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
D +++ + G + + + + ++ ++ + + L+Q A
Sbjct: 120 -----KDSEAGKLLAQGGVTPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAA 174
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
K LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 175 RDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILN 227
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE+L+D K L L + + R E E+R++ + V S G GI+L
Sbjct: 228 GDVPESLKDKKLLSLDLGAMVAGAKYRGEFEERLKAVLQEVTSAEG-GIIL 277
>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 866
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 132/297 (44%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + H Q+ P+H+ L G+ R ++ ++ AL
Sbjct: 6 LTTKFQQAFQDAQSLALAQDHQQMEPIHLLAAFLDQEGGIARPLLSKAG---VRVDALRN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
N AL +P P G Q ++N L A K Q+RG I
Sbjct: 63 QLNRALESMPKVQGHP---GEVQVGRDLTNMLNLADK---IGQKRGD----------TYI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++++DD R+++EAG ++ ++ V E + + ++ E +
Sbjct: 107 STEHFLLALMDDKGEAGRLLKEAGATTKDLEQAVHDLHGGEKINDANAEEQRQALEKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
++ AS K LDP+ R++++ I+ L+ + K N V++GE +V G+
Sbjct: 167 DYTERASQGK-------LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
++ G+VPE+LRD + L L + + R E E+R++ + N + G+ I+
Sbjct: 220 ALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKSLLNDLEKSEGKIILF 276
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 18/197 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E E L + L+ +V Q + V ++N + + R+G R G F
Sbjct: 553 VSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPKRPNGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S ++ V I +S F + +
Sbjct: 607 ------LFLGPTGVGKTELTKALAEFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVG 660
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 661 YEEGGYL---TEAVRRKPYSVVLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNT 717
Query: 775 IVILSCESFSSRSRACS 791
+++++ S R + S
Sbjct: 718 VIVMTSNLGSDRIQEFS 734
>gi|85713565|ref|ZP_01044555.1| AAA ATPase [Nitrobacter sp. Nb-311A]
gi|85699469|gb|EAQ37336.1| AAA ATPase [Nitrobacter sp. Nb-311A]
Length = 878
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 33/295 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q TPLH+ +L S GL + ++ + +A+ AL++
Sbjct: 14 IQSAQSLAMREGHQQFTPLHILKVLLDDSEGLAGSLIDRAGGN---SRAILKATEAALDK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIELEQLI-- 136
+P + G Q ++ A AF+ A QA ++ G + +E+L+
Sbjct: 71 MPKVSGA----GAGQI-YLAPATARAFESAEQAAEKAGD----------SFVTVERLLQA 115
Query: 137 ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
+S+ D +++++ G + + + + +T ++ + + L+Q A
Sbjct: 116 LSLDKDSDAGKLLKDGGVTPQTLNAAINALRKGRTADSATAENAYDALKKYARDLTQAAR 175
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
K LDP+ R+E++ I+ L + K N V++GE + G+ +I G
Sbjct: 176 DGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
DVPE+L+D K L L + S R E E+R++ + V S G G +L + ++
Sbjct: 229 DVPESLKDKKLLALDLGSLIAGAKYRGEFEERLKAVLQEVTSADG-GFILFIDEM 282
>gi|315226312|ref|ZP_07868100.1| chaperone protein ClpB [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|315120444|gb|EFT83576.1| chaperone protein ClpB [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 868
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 148/362 (40%), Gaps = 42/362 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A + A+ A G+ QV PLH+ +++L G++R + + P A
Sbjct: 6 TTLAQEALGDAIQSASAAGNPQVEPLHLLDSLLRQDGGVVRGLVQATGADPQSIGA---Q 62
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP+++ G P S L AQ + ++E++ +
Sbjct: 63 TRRALAKLPSAS-----GSATAQPDGSRQLSQVIASAQKEMK--ALEDEY-------VST 108
Query: 133 EQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L+I I D ++R AG S ++ + Q + S K+ E L
Sbjct: 109 EHLLIGIAASDGEAGEILRHAGASVEALRKAIPQVRGGAKVTSPDAEGSYKALEKYSTDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R+ ++ VI+ L + K N V++GE VV G+
Sbjct: 169 TEQAREGK-------LDPVIGRDSEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
++ GDVP LRD K + L +SS + R E E+R++ + + ++ GR ++ D
Sbjct: 222 RVVAGDVPTGLRDKKIVSLDMSSMVAGSKYRGEFEERMKAVLDEIKKSDGR--IITFIDE 279
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
A ++E M+ G ++ + L+G T Y P+
Sbjct: 280 IHTIVGAGATEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPA 328
Query: 368 LE 369
LE
Sbjct: 329 LE 330
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + + +E L + L K+V QK+ V +++ V + R+G S++
Sbjct: 560 VGRLMQGENEKLLHMEEVLGKRVIGQKEAVAAVSDAVRRSRAGI----------SDLDRP 609
Query: 658 TWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
T F F G K ++AK LA +F V I +S + + S
Sbjct: 610 TASFLFLGPTGVGKTELAKALADFLFDDEKAIVRIDMSEYMEKESVSRLIG--------A 661
Query: 717 SCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 662 APGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDF 721
Query: 772 GDAIVILSC 780
+ I+IL+
Sbjct: 722 KNTILILTS 730
>gi|374293211|ref|YP_005040246.1| ATP-dependent chaperone [Azospirillum lipoferum 4B]
gi|357425150|emb|CBS88033.1| ATP-dependent chaperone [Azospirillum lipoferum 4B]
Length = 867
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 30/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
V+ A TLA RRGH ++TP H+ T+L GL + P KA + L++
Sbjct: 14 VQAAQTLAVRRGHQRLTPEHLLKTLLDDKEGLAANLIRAAGGDP---KAALSAVDAELDK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
LP + G Q ++ L F++A+ A + S ++ LLA +
Sbjct: 71 LPKVEGS----GAGQL-YLTPELSRVFEQAEKVAEKAGDSFVTAERILLA---------L 116
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
++ D +R ++ AG + + + + +I T S+ S E L + A
Sbjct: 117 AMADGTPSARALKSAGVTPQALNTAIN-----DIRKGRTADSA--SAEQGYDALKKYARD 169
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
+ LDP+ R+E++ I+ L + K N V++GE +V G+ +I KGD
Sbjct: 170 LTAAARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGD 229
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE L++ + L L + + R E E+R++ + + +++ G +V
Sbjct: 230 VPEGLKNKQLLSLDLGALVAGAKYRGEFEERLKAVLSEIQAAAGEIVVF 278
>gi|167587015|ref|ZP_02379403.1| AAA ATPase, ClpB [Burkholderia ubonensis Bu]
Length = 865
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALIAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + LV +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---LGRELVGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ DD V R+ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAAADDKGEVGRLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|254252226|ref|ZP_04945544.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
gi|124894835|gb|EAY68715.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
dolosa AUO158]
Length = 865
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALIAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I LV +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELVGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|126442131|ref|YP_001059258.1| ATPase AAA [Burkholderia pseudomallei 668]
gi|167719228|ref|ZP_02402464.1| ATPase AAA-2 [Burkholderia pseudomallei DM98]
gi|167893910|ref|ZP_02481312.1| ATPase AAA-2 [Burkholderia pseudomallei 7894]
gi|167918626|ref|ZP_02505717.1| ATPase AAA-2 [Burkholderia pseudomallei BCC215]
gi|126221624|gb|ABN85130.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 668]
Length = 865
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L +
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFVA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|313139529|ref|ZP_07801722.1| ClpB [Bifidobacterium bifidum NCIMB 41171]
gi|313132039|gb|EFR49656.1| ClpB [Bifidobacterium bifidum NCIMB 41171]
Length = 894
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 155/375 (41%), Gaps = 43/375 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR ++Q T A V+ A+ A G+AQV LHV + +L G+++ +
Sbjct: 1 MRHTEVDMEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAG 60
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIEN 120
P +A+ AL ++PA++ G P S L AA +A E
Sbjct: 61 GSP---QAIGAAVRNALVKMPAAS-----GSTTSQPQASRQLTAALAQA---------EK 103
Query: 121 QQQPLLAVKIELEQLIISILDD-PSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPV 178
+ Q + + E L+I I P+ S +++ G ++ ++ V +
Sbjct: 104 EMQQMGDEYVSTEHLLIGIAASAPNQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAE 163
Query: 179 SSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGEC 236
S K+ E L+ A K LDP+ R++++ VI+ L + K N V++GE
Sbjct: 164 GSYKALEKYSTDLTARAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEP 216
Query: 237 LASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
VV G+ +I GDVP L++ K + L + S + R E E+R++ + N +++
Sbjct: 217 GVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKN 276
Query: 295 CLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIAT 354
G+ ++ D A ++E M+ G ++ + L+G T
Sbjct: 277 ADGQ--IITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATT 323
Query: 355 FQSYMRCKSGHPSLE 369
Y P+LE
Sbjct: 324 LDEYRENIEKDPALE 338
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 43/240 (17%)
Query: 551 EASDKSTSEPSLRLYIPEHKDLKQ--PLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSEN 608
+A D +T E +P+H D + S P V + + +E
Sbjct: 528 DAEDGATGETKPEPMVPDHVDADSVAGIVSEWTGIP-------------VGRLMQGENEK 574
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGV 665
L S+ + L K+V QK+ + +++ V + R+G R G F F G
Sbjct: 575 LLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------------LFLGP 622
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYI---- 721
K ++AK LA +F V I +S + + S + YI
Sbjct: 623 TGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG--------AAPGYIGYEE 674
Query: 722 -ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L ++VE+A+ + ++ GR+ G V + I+I++
Sbjct: 675 GGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTS 734
>gi|168701615|ref|ZP_02733892.1| ATPase AAA-2 domain protein [Gemmata obscuriglobus UQM 2246]
Length = 871
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A + A LA R H Q+ H ++L GL ++ + A+ +
Sbjct: 6 FTEKAQQALAGAQKLAARLNHQQIDTEHALLSLLDQEKGLAPAILTKAG---VSVDAVTV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+RLP T T P ++ LV A+A ++ E +
Sbjct: 63 KLQRELDRLPKVTGT------NAEPRLTQRLVKLIDAAEAEAKKLKDEY---------VS 107
Query: 132 LEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L+++ DD + + +RE G + ++ S +++ + + P + +S E
Sbjct: 108 VEHLLLAATDDTGTAGKTLREFGLTRDRLLSALKEVRGSQRVTSQNPEETYQSLEKYGRD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ V++ L + K N V++GE VV G+
Sbjct: 168 LTQYARNGK-------LDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L+D + L + + R E E+R++ + V S GR I+
Sbjct: 221 QRIVRGDVPEGLKDKLIVALDMGALIAGAKYRGEFEERLKAVLKEVTSSDGRIILF 276
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 16/191 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L L L K+V Q + V + V++ RSG KD + +
Sbjct: 550 VSKLLEGEKEKLLHLEAELHKRVIGQDEAVTAVGEAVVRARSG-------LKDPN--RPI 600
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++A+ LA +F + I +S + S
Sbjct: 601 GSFIFLGPTGVGKTELARALAEFLFDDEKAMIRIDMSEYQEKHTVS-----RLVGAPPGY 655
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ V L +++E+A + ++ GR+ G V + I
Sbjct: 656 VGYDEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTI 715
Query: 776 VILSCESFSSR 786
VI++ S R
Sbjct: 716 VIMTSNVGSQR 726
>gi|76812125|ref|YP_333784.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|167738226|ref|ZP_02411000.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 14]
gi|167902362|ref|ZP_02489567.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei NCTC 13177]
gi|167910600|ref|ZP_02497691.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
pseudomallei 112]
gi|254261495|ref|ZP_04952549.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|254297398|ref|ZP_04964851.1| clpB protein [Burkholderia pseudomallei 406e]
gi|386861504|ref|YP_006274453.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
gi|418533774|ref|ZP_13099633.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|418540647|ref|ZP_13106174.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|418546892|ref|ZP_13112080.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|76581578|gb|ABA51053.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
gi|157807919|gb|EDO85089.1| clpB protein [Burkholderia pseudomallei 406e]
gi|254220184|gb|EET09568.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
gi|385360734|gb|EIF66648.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
gi|385361021|gb|EIF66923.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
gi|385362820|gb|EIF68618.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
gi|385658632|gb|AFI66055.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
Length = 865
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L +
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFVA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|374581523|ref|ZP_09654617.1| ATP-dependent chaperone ClpB [Desulfosporosinus youngiae DSM 17734]
gi|374417605|gb|EHQ90040.1| ATP-dependent chaperone ClpB [Desulfosporosinus youngiae DSM 17734]
Length = 872
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + A T+A R G++ V P H+ ++L G++ + + AL
Sbjct: 8 FTQKSQEAITGAQTMAERNGNSLVEPEHLLLSLLEQGEGVVPQVLTKIG---IAVGALIQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NR P + GG+ Q P + LVAA ++ P
Sbjct: 65 TVRQEINRFPRIS-----GGNVQLSISPRLRTVLVAA-------------HDEMAPFGDE 106
Query: 129 KIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L++ IL+ V ++ ++ G + ++ + + + + P + + E
Sbjct: 107 YVSTEHLLLGILEKAGGFVEQIFKKVGLNREKLLQALREVRGTQRVTSPNPEGTYAALEQ 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L L Q A R LDP+ R+E++ VI+ L + K N V++GE +V
Sbjct: 167 YGLNLVQQAR-------RGKLDPVIGRDEEIRRVIQTLSRRTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I +GDVPEA++D + + L + +
Sbjct: 220 EGLAQRIVRGDVPEAIKDKQVIALDLGTL 248
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + ++V Q++ V +++ V + R+G R G F
Sbjct: 551 VSKLMESEMQKLVRMEERIHQRVIGQEEAVKAVSDAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++++ LA +F V I +S + S
Sbjct: 605 ------LFLGPTGVGKTELSRALAEFLFDDEQAMVRIDMSEYMEKHTVS-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 654 PGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHSDVYNVLLQLLDDGRLTDGQGRIVNFK 713
Query: 773 DAIVILSC 780
+ +VIL+
Sbjct: 714 NTVVILTS 721
>gi|115526330|ref|YP_783241.1| ATPase [Rhodopseudomonas palustris BisA53]
gi|115520277|gb|ABJ08261.1| ATPase AAA-2 domain protein [Rhodopseudomonas palustris BisA53]
Length = 879
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 32/297 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + ++ A +LA R GH Q +PLHV +L S GL +S + +AL
Sbjct: 7 TERSRGFIQSAQSLAMREGHQQFSPLHVLKVLLDDSEGLAGGLIDRSGGN---SRALLKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
ALN+LP + GG Q P + A QA ++ G V
Sbjct: 64 TEEALNKLPKVSG----GGSGQIYLAPDTARLFTTA---EQAAEKAGDG--------FVT 108
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+E L +++ D +++ +AG + + + + +T ++ + +
Sbjct: 109 VERLLLALALDKDSEAGKLLAKAGITPQNLNAAINALRKGRTADSATAENAYDALKKYAR 168
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 169 DLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGL 221
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K L L + S R E E+R++ + + V S G I+
Sbjct: 222 ALRILNGDVPESLKDKKLLSLDLGSMIAGAKYRGEFEERLKAVLSEVTSAEGSIILF 278
>gi|126453997|ref|YP_001066525.1| clpB protein [Burkholderia pseudomallei 1106a]
gi|167815415|ref|ZP_02447095.1| ClpB heat-shock protein [Burkholderia pseudomallei 91]
gi|167823825|ref|ZP_02455296.1| ClpB heat-shock protein [Burkholderia pseudomallei 9]
gi|167845366|ref|ZP_02470874.1| ClpB heat-shock protein [Burkholderia pseudomallei B7210]
gi|217421888|ref|ZP_03453392.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|226197488|ref|ZP_03793065.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237812581|ref|YP_002897032.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242314296|ref|ZP_04813312.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|254179519|ref|ZP_04886118.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|254197201|ref|ZP_04903623.1| clpB protein [Burkholderia pseudomallei S13]
gi|403518952|ref|YP_006653085.1| clpB protein [Burkholderia pseudomallei BPC006]
gi|418382969|ref|ZP_12966888.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|418553114|ref|ZP_13117952.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|126227639|gb|ABN91179.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106a]
gi|169653942|gb|EDS86635.1| clpB protein [Burkholderia pseudomallei S13]
gi|184210059|gb|EDU07102.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
gi|217395630|gb|EEC35648.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
gi|225930867|gb|EEH26877.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
gi|237506453|gb|ACQ98771.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
gi|242137535|gb|EES23937.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
gi|385372048|gb|EIF77180.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
gi|385376808|gb|EIF81443.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
gi|403074594|gb|AFR16174.1| clpB protein [Burkholderia pseudomallei BPC006]
Length = 865
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L +
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFVA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|421734783|ref|ZP_16173839.1| ClpB protein [Bifidobacterium bifidum LMG 13195]
gi|407077286|gb|EKE50136.1| ClpB protein [Bifidobacterium bifidum LMG 13195]
Length = 887
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 154/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V+ A+ A G+AQV LHV + +L G+++ + +P +
Sbjct: 1 MEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGNP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL ++PA++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVKMPAAS-----GSTTSQPQASRQLTAALAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISILDD-PSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S +++ G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASAPNQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTARAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L S+ + L K+V QK+ + +++ V + R+G R G F
Sbjct: 557 VGRLMQGENEKLLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 610
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 611 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 657
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 658 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 716
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 717 DFKNTILIMTS 727
>gi|452825606|gb|EME32602.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Galdieria
sulphuraria]
Length = 922
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 33/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT +A ++ + LA GH+Q+TPLH+A + GL + ++ + P+ +
Sbjct: 6 LTDKAQEAIQASHELALENGHSQLTPLHLAAALFTEDHGLASSVATKAKADPVNVRR--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP+ P P S + + + AQ+ +++ Q LAV
Sbjct: 63 ELQKAVIRLPSQDPPP-----TTVPP-SQSFLKVIRDAQSLRKK-----QGDTHLAV--- 108
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQV-KSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ L+I++ DD V A FSS + K +E+AV + +K+ +S
Sbjct: 109 -DHLLIALCDDKDVI-----ACFSSADLTKHALEEAVK---SVRGNRKVDSKAADSTYDA 159
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A LDP+ R++++ VI L +RK N V++G+ +V G+
Sbjct: 160 LNQYAQDFVALAEEGKLDPVIGRDDEIRRVIRVLCRRRKNNPVLIGDPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I +GDVPE L + + L + + R E E+R++ + V+ G+ I+L + +
Sbjct: 220 QRIVRGDVPENL-NCRLYALDMGALVAGAKYRGEFEERLKAVLREVKEGEGK-IILFIDE 277
Query: 307 L 307
L
Sbjct: 278 L 278
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 35/266 (13%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETW 659
K + ++E L SL +L +++ Q + V +A VL+ R+G R ++
Sbjct: 560 KLSQSDAERLLSLSASLHQRIIGQDEAVDAVAAAVLRSRAGVSRPTQPLG--------SF 611
Query: 660 LFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCS 719
LF G K ++AK LA +F + V I S + + S
Sbjct: 612 LFL-GPTGVGKTELAKALAAELFDDEKHVVRIDCSEYMEQHSVS-----RLIGAPPGYVG 665
Query: 720 YIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y E + EAV P+ V L ++VE+A + ++ GR+ + G + + ++I
Sbjct: 666 YEEGGQLTEAVLRRPYNVVLFDEVEKAHRNVMNVLLQVLDDGRLTDNQGRTIDFTNTVII 725
Query: 778 LSCE---SFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSI 834
L+ F + P E +G+ EGT P VS+ I D+ T + +
Sbjct: 726 LTSNLGAQFLMNIGSKGP--------AELSEGSDHEGT-PVVSIPKEATI-DNRTREAVM 775
Query: 835 DDIGL------LESVDKRIIFKIMEL 854
++ L L +D +IFK + L
Sbjct: 776 REVKLHFRPEFLNRLDDIVIFKPLAL 801
>gi|53719118|ref|YP_108104.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|254189090|ref|ZP_04895601.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
gi|157936769|gb|EDO92439.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
Length = 876
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 17 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---IQALQG 73
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L +
Sbjct: 74 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFVA 118
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 119 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 178
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 179 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 231
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 232 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 287
>gi|402771387|ref|YP_006590924.1| chaperone protein ClpB [Methylocystis sp. SC2]
gi|401773407|emb|CCJ06273.1| Chaperone protein ClpB [Methylocystis sp. SC2]
Length = 873
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A ++A R GH Q TP H+ +L GL +A L + +AL
Sbjct: 7 TERARGFVQSAQSMATREGHQQFTPEHILKVLLDDDQGL--SAGLIDRAGGRSREALAKT 64
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
AL +LP + G Q ++ A F A+ A + S ++ LLA+ +
Sbjct: 65 -EAALAKLPKVGGS----GAGQL-YLAPATARLFDNAEKIAQKAGDSYVTVERLLLALAM 118
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E D +R++R+AG + + + +E ++ ++ + +
Sbjct: 119 E---------KDSEAARILRDAGVTPQTLNAAIEDLRKGRTADSASAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R+E++ ++ L + K N V++GE +V G+
Sbjct: 170 LTEAAREGK-------LDPVIGRDEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L D K L L + + R E E+R++ + N V + G I+
Sbjct: 223 LRIVNGDVPESLEDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGNVILF 278
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 72/192 (37%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L K+V Q D V ++ V + R+G R G F
Sbjct: 547 VDKMLEGEREKLLHMEDELAKRVVGQHDAVVAVSTAVRRARAGLQDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V + +S + S R
Sbjct: 601 ------IFLGPTGVGKTELTKALAAFLFDDETAMVRLDMSEYMEKHSVARLIGAPPG--- 651
Query: 711 RSRDEQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E A EAV P++V L +++E+A + ++ GR+ G
Sbjct: 652 ------YVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRT 705
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 706 VDFKNTLIIMTS 717
>gi|311063724|ref|YP_003970449.1| ClpB protein [Bifidobacterium bifidum PRL2010]
gi|310866043|gb|ADP35412.1| ClpB protein [Bifidobacterium bifidum PRL2010]
Length = 887
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 154/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V+ A+ A G+AQV LHV + +L G+++ + +P +
Sbjct: 1 MEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGNP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL ++PA++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVKMPAAS-----GSTTSQPQASRQLTAALAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISILDD-PSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S +++ G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASAPNQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTARAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 43/240 (17%)
Query: 551 EASDKSTSEPSLRLYIPEHKDLKQ--PLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSEN 608
+A D +T E +P+H D + S P V + + +E
Sbjct: 521 DAEDGATGETKPEPMVPDHVDADSVAGIVSEWTGIP-------------VGRLMQGENEK 567
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGV 665
L S+ + L K+V QK+ + +++ V + R+G R G F F G
Sbjct: 568 LLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------------LFLGP 615
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYI---- 721
K ++AK LA +F V I +S + + S + YI
Sbjct: 616 TGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG--------AAPGYIGYEE 667
Query: 722 -ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L ++VE+A+ + ++ GR+ G V + I+I++
Sbjct: 668 GGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTS 727
>gi|420237302|ref|ZP_14741773.1| ATP-dependent chaperone ClpB [Parascardovia denticolens IPLA 20019]
gi|391879573|gb|EIT88079.1| ATP-dependent chaperone ClpB [Parascardovia denticolens IPLA 20019]
Length = 879
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 147/362 (40%), Gaps = 42/362 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A + A+ A G+ QV PLH+ +++L G++R + + P A
Sbjct: 6 TTLAQEALGDAIQSASAAGNPQVEPLHLLDSLLRQDGGVVRGLVQATGADPQSIGA---Q 62
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP+++ G P S L AQ + +E++ +
Sbjct: 63 TRRALAKLPSAS-----GSATAQPDGSRQLSQVIASAQKEMK--VLEDEY-------VST 108
Query: 133 EQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L+I I D ++R AG S ++ + Q + S K+ E L
Sbjct: 109 EHLLIGIAASDGEAGEILRHAGASVEALRKAIPQVRGGAKVTSPDAEGSYKALEKYSTDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R+ ++ VI+ L + K N V++GE VV G+
Sbjct: 169 TEQAREGK-------LDPVIGRDSEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
++ GDVP LRD K + L +SS + R E E+R++ + + ++ GR ++ D
Sbjct: 222 RVVAGDVPTGLRDKKIVSLDMSSMVAGSKYRGEFEERMKAVLDEIKKSDGR--IITFIDE 279
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
A ++E M+ G ++ + L+G T Y P+
Sbjct: 280 IHTIVGAGATEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPA 328
Query: 368 LE 369
LE
Sbjct: 329 LE 330
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + + +E L + L K+V QK+ V +++ V + R+G S++
Sbjct: 560 VGRLMQGENEKLLHMEEVLGKRVIGQKEAVAAVSDAVRRSRAGI----------SDLDRP 609
Query: 658 TWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
T F F G K ++AK LA +F V I +S + + S
Sbjct: 610 TASFLFLGPTGVGKTELAKALADFLFDDEKAIVRIDMSEYMEKESVSRLIG--------A 661
Query: 717 SCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 662 APGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDF 721
Query: 772 GDAIVILSC 780
+ I+IL+
Sbjct: 722 KNTILILTS 730
>gi|402566351|ref|YP_006615696.1| ClpB protein [Burkholderia cepacia GG4]
gi|402247548|gb|AFQ48002.1| ClpB protein [Burkholderia cepacia GG4]
Length = 865
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGEIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|302903094|ref|XP_003048783.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729717|gb|EEU43070.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 923
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T A V+ AM LA + H+Q+ P+H+A ++L A + L R
Sbjct: 7 FTDRAQKAVEDAMALAEQYAHSQLVPVHLAVSLLDPPPDPSKDQQNAPAVVSTLFRQVIE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRG 116
++H P + + L RLP+ P H P N L A + + +
Sbjct: 67 RAHGDP---QLFDRALKKTLVRLPSQDPPP---EHVSLAPQFHNVLRKALELQKVQK--- 117
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
+ ++ LI ++ D+PS+ ++EA ++ V++AV ++
Sbjct: 118 ----------DTYVGVDHLITALSDEPSIQSALKEANIPKPKL---VQEAVQAIRGTKRV 164
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E N + T T++++ + +DP+ R E++ V+ L + K N V++G
Sbjct: 165 DSKTADTEEENENLAKFTIDMTEMARDK-KIDPVIGREEEIRRVVRILSRRTKNNPVLIG 223
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E VV G+ +I DVP+ L++ K L L + +
Sbjct: 224 EPGVGKTTVVEGLAQRIVNRDVPDNLKNCKLLSLDVGAL 262
>gi|254248039|ref|ZP_04941360.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
gi|124872815|gb|EAY64531.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
cenocepacia PC184]
Length = 865
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSL-----EICSQSTPVSSNKSKE 185
E ++++ DD ++ R+ G + + ++E A++ ++ SQ S ++ +
Sbjct: 108 SEMFLLAVSDDKGDAGKLARQHGLT----RKSLEAAIAAVRGGSQVHSQDAE-SQREALK 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE L+ + L L +++ R E E+R++ + N + GR IV
Sbjct: 216 VEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIV 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|406941815|gb|EKD74201.1| hypothetical protein ACD_45C00035G0005 [uncultured bacterium]
Length = 862
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + + A ++A R HA + P+HV +L G +R ++++++ L
Sbjct: 6 LTSKFQAALADAQSMALGRDHAFIEPVHVMKVLLDQEGGSIRPVLMKANAN---IAVLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+NRLP T GG N L+ + A +R+ I
Sbjct: 63 ALDAAINRLPQVEGT---GGEVHVSNDLNRLLNLTDKL-AQKRKDQY-----------IS 107
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ +D V ++R+A + ++ +E+ + ++ E +
Sbjct: 108 SELFLLAATEDAGVLGELLRKASITKQAIEKAIEEERGGQTVQDPNVEDQRRALEKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A K LDP+ R+ ++ I+ L+ + K N V++GE +V G+
Sbjct: 168 LTARAEQGK-------LDPVIGRDAEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VPE L+D + L L + + R E E+R++ + N
Sbjct: 221 QRIVNGEVPEGLQDKRLLALDLGALIAGAKFRGEFEERLKAVLN 264
>gi|310286828|ref|YP_003938086.1| ATP-binding subunit of Clp protease [Bifidobacterium bifidum S17]
gi|309250764|gb|ADO52512.1| ATP-binding subunit of Clp protease [Bifidobacterium bifidum S17]
Length = 887
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 154/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V+ A+ A G+AQV LHV + +L G+++ + +P +
Sbjct: 1 MEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGNP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL ++PA++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVKMPAAS-----GSTTSQPQASRQLTAALAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISILDD-PSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S +++ G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASAPNQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTARAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L S+ + L K+V QK+ + +++ V + R+G R G F
Sbjct: 557 VGRLMQGENEKLLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 610
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 611 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 657
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 658 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 716
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 717 DFKNTILIMTS 727
>gi|402572994|ref|YP_006622337.1| ATP-dependent chaperone ClpB [Desulfosporosinus meridiei DSM 13257]
gi|402254191|gb|AFQ44466.1| ATP-dependent chaperone ClpB [Desulfosporosinus meridiei DSM 13257]
Length = 864
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + +A T+A R G++ V P H+ T+L G++ + + +L
Sbjct: 8 FTQKSQEAISEAQTMAERNGNSLVEPEHLLLTLLEQGDGVIPQVLTKLG---IAVGSLIS 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
LNR P + G + Q P + N LVAA ++ P
Sbjct: 65 TIRQELNRFPRIS-----GSNVQMSISPRLRNVLVAAH-------------DEMAPFGDE 106
Query: 129 KIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L++ I + + +V+++AG + ++ + + + + P + + E
Sbjct: 107 YVSTEHLLLGIWEKSGGAAEKVLKQAGLTREKLLQALREIRGTQRVTSPNPEGTYAALEQ 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L L + A R LDP+ R+E++ VI+ L + K N V++GE +V
Sbjct: 167 YGLNLVRQAR-------RGRLDPVIGRDEEIRRVIQTLSRRTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I +GDVPEA++D + + L + +
Sbjct: 220 EGLAQRIVRGDVPEAIKDKQVISLDMGTL 248
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + + ++V Q++ V +A+ V + R+G R G F
Sbjct: 551 VTKLLESELQKLVQMEDRIHQRVIGQEEAVRAVADAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++++ LA +F V I +S + S
Sbjct: 605 ------LFLGPTGVGKTELSRALAEFLFDDEQAMVRIDMSEYMEKHTVS-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 654 PGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHTDVSNVLLQLLDDGRLTDGQGRIVNFK 713
Query: 773 DAIVILSC 780
+ +VIL+
Sbjct: 714 NTVVILTS 721
>gi|154245846|ref|YP_001416804.1| ATPase [Xanthobacter autotrophicus Py2]
gi|154159931|gb|ABS67147.1| ATPase AAA-2 domain protein [Xanthobacter autotrophicus Py2]
Length = 879
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 30/300 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A +LA R G+ Q TP H+ ++ GL ++ + + +A
Sbjct: 7 TERARGFVQSAQSLATREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNLVLVRA---E 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIE 131
AL +LP GG Q +S L F+ A QA ++ G V +E
Sbjct: 64 VEAALKKLPKVE-----GGSGQV-YLSQQLAKVFETAEQAAKKAGDG--------YVTVE 109
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L ++I D R++ +AG + + + +E +T ++ + + L
Sbjct: 110 RMLLALTIEKDTEAGRILVKAGVTPQTLNAAIEALRKGRTADSATAENAYDALKKYARDL 169
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+Q K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 TQAVRDGK-------LDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAR 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+L++ L L + S R E E+R++ + + V S G GI+L + ++
Sbjct: 223 RIVDGDVPESLKNKSLLALDMGSLIAGAKYRGEFEERLKSVLSEVESAEG-GIILFIDEM 281
>gi|392378192|ref|YP_004985351.1| ATP-dependent chaperone [Azospirillum brasilense Sp245]
gi|356879673|emb|CCD00599.1| ATP-dependent chaperone [Azospirillum brasilense Sp245]
Length = 876
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 32/290 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC-FNVALN 78
V+ A TLA RRGH ++TP H+ T+L GL + P AL L + L+
Sbjct: 14 VQAAQTLALRRGHQRLTPEHLLKTLLDDKEGLAANLIRAAGGDP----ALALSGVDAELD 69
Query: 79 RLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLI 136
+ P G Q ++ L F++A+A ++ S ++ LLA
Sbjct: 70 KQPKVEGA----GAGQV-YLTPELSRVFEQAEAVAKKAGDSYVTAERILLA--------- 115
Query: 137 ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
+++ D + V++ AG + + + + + + + S E L + A
Sbjct: 116 LAMADGTPSAAVLKRAGVTPQALNTAINEV-------RKGRTADTASAEQGYDALKKYAR 168
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
S LDP+ R+E++ I+ L + K N V++GE +V G+ +I KG
Sbjct: 169 DLTESAREGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKG 228
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVPE L++ K L L ++ R E E+R++ + +++ G IV
Sbjct: 229 DVPEGLKNKKLLSLDLAGMVAGAKYRGEFEERLKAVLQEIQAAAGEIIVF 278
>gi|134277175|ref|ZP_01763890.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
gi|134250825|gb|EBA50904.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
305]
Length = 865
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T +GG Q + L +A + + Q L +
Sbjct: 63 ALNEAISRLPQVTG---MGGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFVA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|390936186|ref|YP_006393745.1| ATP-dependent chaperone [Bifidobacterium bifidum BGN4]
gi|389889799|gb|AFL03866.1| ATP-dependent chaperone [Bifidobacterium bifidum BGN4]
Length = 887
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 153/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V+ A+ A G+AQV LHV + +L G+++ + P +
Sbjct: 1 MEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGSP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL ++PA++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVKMPAAS-----GSTTSQPQASRQLTAALAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISILDD-PSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S +++ G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASAPNQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTARAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 43/240 (17%)
Query: 551 EASDKSTSEPSLRLYIPEHKDLKQ--PLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSEN 608
+A D +T E +P+H D + S P V + + +E
Sbjct: 521 DAEDGATGETKPEPMVPDHVDADSVAGIVSEWTGIP-------------VGRLMQGENEK 567
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGV 665
L S+ + L K+V QK+ + +++ V + R+G R G F F G
Sbjct: 568 LLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------------LFLGP 615
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYI---- 721
K ++AK LA +F V I +S + + S + YI
Sbjct: 616 TGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG--------AAPGYIGYEE 667
Query: 722 -ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L ++VE+A+ + ++ GR+ G V + I+I++
Sbjct: 668 GGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTS 727
>gi|53723604|ref|YP_103036.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|67639679|ref|ZP_00438519.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|121598639|ref|YP_993186.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124385885|ref|YP_001026039.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10229]
gi|126448469|ref|YP_001080692.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei NCTC 10247]
gi|167003461|ref|ZP_02269247.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
gi|254178097|ref|ZP_04884752.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|254206315|ref|ZP_04912667.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|254358273|ref|ZP_04974546.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|52427027|gb|AAU47620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 23344]
gi|121227449|gb|ABM49967.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei SAVP1]
gi|124293905|gb|ABN03174.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10229]
gi|126241339|gb|ABO04432.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
10247]
gi|147753758|gb|EDK60823.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
gi|148027400|gb|EDK85421.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
2002721280]
gi|160699136|gb|EDP89106.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
mallei ATCC 10399]
gi|238520268|gb|EEP83730.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
4]
gi|243061022|gb|EES43208.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
Length = 865
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A + A R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALSDAQSFAAGRDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L +
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFVA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRRALESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|217978067|ref|YP_002362214.1| ATP-dependent chaperone ClpB [Methylocella silvestris BL2]
gi|217503443|gb|ACK50852.1| ATP-dependent chaperone ClpB [Methylocella silvestris BL2]
Length = 864
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 31/301 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A +LA R G+ Q TP H+ +L GL +A L + AL
Sbjct: 7 TERARGFVQSAQSLAMREGNQQFTPEHLLKVLLDDEQGL--SAGLIDKAGGRSRDALT-A 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
+AL +LP + G Q I+ L F A+ A + S ++ LLA+ +
Sbjct: 64 TELALAKLPKVEGS----GAGQV-YITPTLARLFDNAEKIAEKAGDSYVTVERLLLALAM 118
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E + +++ AG + + +E+ +T ++ + +
Sbjct: 119 E---------KNSEAGKILERAGATPQNLNKAIEELRKGRTADNATAENAYDALKKYTRD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTEAARSGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD K L L + S R E E+R++ I V S G GI+L + +
Sbjct: 223 LRIVNGDVPESLRDKKLLALDMGSLIAGAKYRGEFEERLKGILTEVTSAAG-GIILFIDE 281
Query: 307 L 307
+
Sbjct: 282 M 282
>gi|330817193|ref|YP_004360898.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
gi|327369586|gb|AEA60942.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
gladioli BSR3]
Length = 865
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV +++ + G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLASLIGQTDGSARSLMSRTGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDSFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGMTRKALEAAIAAVRGGSQVHSADAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARSGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKSVLNDIAKDEGRTIVF 276
>gi|416981826|ref|ZP_11938083.1| ClpB heat-shock protein, partial [Burkholderia sp. TJI49]
gi|325519579|gb|EGC98938.1| ClpB heat-shock protein [Burkholderia sp. TJI49]
Length = 282
Score = 68.2 bits (165), Expect = 2e-08, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFR--HMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|307243262|ref|ZP_07525433.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus stomatis
DSM 17678]
gi|306493390|gb|EFM65372.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus stomatis
DSM 17678]
Length = 862
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 169/814 (20%), Positives = 307/814 (37%), Gaps = 129/814 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T + + A + A R + QV +H+ +L GL+ + + + ++L+
Sbjct: 6 MTLRVQNALNDAFSEAVRNNNQQVDVIHLLYALLDQEDGLIPNIVEKMN---ISSESLKK 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT----ISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
+++LP+ T G + Q T I+ +V A K A +
Sbjct: 63 SVKNEISKLPSVTGG---GANSQGVTATRGINEIMVNAEKIADDFKDS------------ 107
Query: 128 VKIELEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
I +E ++++I D + R+ + G + L + Q S+
Sbjct: 108 -YISVEHIMLAIFDKEKSSVIGRIFGQYGLVKQEF---------LNVLHQVRGNQRVDSQ 157
Query: 185 ESNVLVLSQTASATKVSK--PRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ + + T T + K LDP+ R+E++ I L + K N V++GE
Sbjct: 158 DPEGIYDALTKYGTNLVKLAENNKLDPVIGRDEEIRRAIRILSRRTKNNPVLIGEPGVGK 217
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+V G+ +I KGDVPE L+D L + + R E E+R++ + V S G+
Sbjct: 218 TAIVEGLAQRIVKGDVPEGLKDKVIFSLDMGALIAGAKYRGEFEERLKAVLKEVSSSEGK 277
Query: 299 GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY 358
I+L + ++ A +E M+ G L+ + +G TF Y
Sbjct: 278 -IILFIDEIHTI-VGAGKTEGS-----------MDAGNLIKPMLARGELNCIGATTFDEY 324
Query: 359 MRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEE 418
+ +LE + P+ + SL T S L+ + G+
Sbjct: 325 RKYIEKDKALERRF--QPVIVDEPSLE----DTISILRGLKERFEIHHGIRI-------H 371
Query: 419 NKQLTCCADCSAKFEAEARSLQSSSCN--------SDSPTSSLPAWLQ-------QYKNE 463
+ + A S ++ + R L + + S SLP L + E
Sbjct: 372 DNAIVAAAKLSDRY-IQDRFLPDKAIDLIDEAGAMIRSEIDSLPTDLDIVRRRLLMLETE 430
Query: 464 KKATLSNNDKDSGVR---------DLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTS 514
++A L D+ S R DL ++ +S+ K+ S +
Sbjct: 431 REALLKEEDEKSKSRLEELEKELADLKEENDSMTARYEKEKNRITELKVLKSNLDEARAK 490
Query: 515 GFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQ 574
Y+++Y +F+K PK +F DK SE L LK+
Sbjct: 491 VEKYEREY-DFNKAAEVKFGQIPKLEEEIKNF------EDKYDSESGESL-------LKE 536
Query: 575 PLSSNRNSTPNST-SSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANT 633
++ N + S + + ++ K K LN E N L K+V Q + V ++N
Sbjct: 537 EVTENEIADIISKWTGIPVSKLVETEKAKLLNLE------NQLHKRVIGQDEAVTAVSNA 590
Query: 634 VLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIAL 693
+L+ R+G +K K F G K ++AK LAR +F S ++ V I +
Sbjct: 591 ILRSRAGLSDQK---------KPMGSFIFLGPTGVGKTELAKTLARDLFDSEDSIVRIDM 641
Query: 694 SSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKG 751
S + + S Y E + EA+ P+ V L +++E+A
Sbjct: 642 SEYMEKHSVS-----RLVGPPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHDDVFNI 696
Query: 752 FKRAIESGRIVTSSGDEVSLGDAIVILSCESFSS 785
F + ++ GR+ + G V ++++I++ SS
Sbjct: 697 FLQILDDGRLTDNKGKTVDFKNSLIIMTSNIGSS 730
>gi|221198117|ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|221208392|ref|ZP_03581395.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221215144|ref|ZP_03588111.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|421471427|ref|ZP_15919714.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|421475449|ref|ZP_15923396.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
gi|221165080|gb|EED97559.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
gi|221171805|gb|EEE04249.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
gi|221182049|gb|EEE14450.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
gi|400225514|gb|EJO55675.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
BAA-247]
gi|400230122|gb|EJO59935.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
Length = 865
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV +LA G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALLAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNDAIARLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|402820810|ref|ZP_10870374.1| hypothetical protein IMCC14465_16080 [alpha proteobacterium
IMCC14465]
gi|402510456|gb|EJW20721.1| hypothetical protein IMCC14465_16080 [alpha proteobacterium
IMCC14465]
Length = 881
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 34/307 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
+ + LT + V A LA R GH + P+H+ + + GL + ++P + +
Sbjct: 6 LPENLTDKLKGFVGSAQGLALREGHQRFEPIHILKIFMDDAEGLASGLIQVAGANPDKIR 65
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQA-HQRRGSIENQQQPLL 126
L ++P + G Q +S V F A+ Q+RG
Sbjct: 66 D---NLGAQLGKMPKVS-----GSGSQL-IMSPETVKVFSNAEELAQKRGD--------- 107
Query: 127 AVKIELEQLIISIL--DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
I +E L++++L DD SR+++EAG ++ ++ + SL Q+ S+ +S
Sbjct: 108 -SFISVELLLLAMLKTDDADTSRLLKEAGLTTDALEKAI---ASLRKGRQADSASAEQSY 163
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E+ + K LDP+ R+E++ ++ L + K N V++GE
Sbjct: 164 EALERYTRDLTDDARNGK----LDPVIGRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTA 219
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+ G+ +I GDVPE+L+ K L L + S R E E+R++ + V + G GI
Sbjct: 220 IAEGLALRIVDGDVPESLKGKKLLSLDMGSLIAGAKYRGEFEERLKSVLQDVTASEG-GI 278
Query: 301 VLNLGDL 307
VL + ++
Sbjct: 279 VLFIDEM 285
>gi|182677816|ref|YP_001831962.1| ATP-dependent chaperone ClpB [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633699|gb|ACB94473.1| ATP-dependent chaperone ClpB [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 865
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 37/297 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKALELCFNV 75
++ A +LA+R H Q TP H+ +L + GL+ A +S Q + +
Sbjct: 14 IQSAQSLAQRENHQQFTPEHLLKVLLDDPEGLAAGLIDRAGGRSRDALTQTE-------L 66
Query: 76 ALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQ 134
AL +LP + G PT + A K AQ + S ++ LLA+ +E
Sbjct: 67 ALAKLPKVQGSG--AGQVYLAPTTARIFENAEKIAQ--KAGDSFVTVERLLLALAME--- 119
Query: 135 LIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQT 194
+++ +AG + + + +EQ +T ++ + + L++
Sbjct: 120 ------KSAEAGKILEKAGVTPQSLGAAIEQLRKGRTADSATAENAYDALKKYARDLTEA 173
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
A + +LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 174 ARSG-------ALDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIV 226
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
GDVPE+LRD + L L + S R E E+R++ I N V++ G GI+L + ++
Sbjct: 227 NGDVPESLRDKRLLALDMGSLIAGAKYRGEFEERLKAILNEVQAAEG-GIILFIDEM 282
>gi|330795076|ref|XP_003285601.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
gi|325084423|gb|EGC37851.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
Length = 882
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 140/301 (46%), Gaps = 33/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + S++ +A LAR + ++Q+ P+H+A +++ L ++ ++ ++
Sbjct: 8 FTEKTNSILIKAQELAREKSNSQLAPIHLAVSLMNDEDSLAKSIYEKAGG---DIPKIDA 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTIS-NALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
F LN++P P IS N+L R+ + ++ + ++ +
Sbjct: 65 GFKRLLNKVPVQQPVP--------ADISPNSLFVQILRSASRYQKNNGDSH--------L 108
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
L+ LI+++LDD + V+ +AG + QV V++ + ++KS ES
Sbjct: 109 ALDHLILALLDDRDILSVLGDAGATKEQVMQAVKEI-------RGNKKITSKSAESTYDA 161
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ LDP+ R++++ VI L + K N V++GE VV G+
Sbjct: 162 LSKYGYDLVQQAQEGKLDPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I +GD+P+ L + + + L + + R + E+R++ + V+ G GI+L + +
Sbjct: 222 QRIVRGDIPDNL-NARVIALDMGALIAGAKYRGDFEERLKAVLKEVKDSNG-GIILFIDE 279
Query: 307 L 307
+
Sbjct: 280 I 280
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 34/211 (16%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L L L K+V Q + V +A+ VL+ +SG R
Sbjct: 550 VSKLSQTEKQRLLHLGEHLHKRVVGQDEAVDAVADAVLRSKSGLARENQPLG-------- 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSR 713
++LF G K ++AK LA +F + + I +S + S +R +
Sbjct: 602 SFLFL-GPTGVGKTELAKALAFELFDDEKHMIRIDMSEYMEQHSVSRLIGAPPGYVGYDQ 660
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
Q EAV P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 661 GGQ-------LTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVLDDGRLTDGQGRTVDFSN 713
Query: 774 AIVILSC--------------ESFSSRSRAC 790
++I++ ++FS+ S++C
Sbjct: 714 VVIIMTSNLGSQYILQEQSNQDNFSTLSQSC 744
>gi|209883928|ref|YP_002287785.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5]
gi|337742364|ref|YP_004634092.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5]
gi|386031329|ref|YP_005952104.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4]
gi|209872124|gb|ACI91920.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5]
gi|336096395|gb|AEI04221.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4]
gi|336100028|gb|AEI07851.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5]
Length = 877
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 35/296 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q +PLH+ +L S GL ++ + +A+ AL +
Sbjct: 14 IQSAQSLALREGHQQFSPLHILKVLLDDSEGLSGGLIDRAGGN---SRAILQATEQALAK 70
Query: 80 LPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAVKIELEQL 135
LP + GG Q P + A AA QA ++ G S ++ LLA+ ++ E
Sbjct: 71 LPKVSG----GGAGQIYLAPETARAFSAA---EQAAEKAGDSFVTVERLLLALSLDKES- 122
Query: 136 IISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+++ + G + + + + ++ ++ + + L+Q A
Sbjct: 123 --------EAGKLLAQGGVTPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAA 174
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
K LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 175 RDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILN 227
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
GDVPE+L+D K L L + + R E E+R++ + V + G GIVL + ++
Sbjct: 228 GDVPESLKDKKLLALDLGALIAGAKYRGEFEERLKAVLQEVTAAEG-GIVLFIDEM 282
>gi|288956987|ref|YP_003447328.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
gi|288909295|dbj|BAI70784.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
Length = 867
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 30/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A TLA RRGH ++TP H+ T+L GL + P +A + L++
Sbjct: 14 IQAAQTLAVRRGHQRLTPEHLLKTLLDDKEGLAANLIRTAGGDP---QAALSAVDAELDK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
LP + G Q ++ L F++A+ A + S ++ LLA +
Sbjct: 71 LPKVEGS----GAGQL-YLTPELSRLFEQAEKVAEKAGDSFVTAERILLA---------L 116
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
++ D +R ++ AG + + + + +I T S+ S E L + A
Sbjct: 117 AMADGTPSARALKSAGVTPQALNTAIN-----DIRKGRTADSA--SAEQGYDALKKYARD 169
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
+ LDP+ R+E++ I+ L + K N V++GE +V G+ +I KGD
Sbjct: 170 LTAAARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGD 229
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE L++ + L L + + R E E+R++ + + +++ G +V
Sbjct: 230 VPEGLKNKQLLSLDLGALVAGAKYRGEFEERLKAVLSEIQAAAGEIVVF 278
>gi|417942555|ref|ZP_12585822.1| Negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve CECT 7263]
gi|376166873|gb|EHS85750.1| Negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve CECT 7263]
Length = 889
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIKAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
>gi|302832301|ref|XP_002947715.1| hypothetical protein VOLCADRAFT_57497 [Volvox carteri f.
nagariensis]
gi|300267063|gb|EFJ51248.1| hypothetical protein VOLCADRAFT_57497 [Volvox carteri f.
nagariensis]
Length = 937
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 37/304 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + V+ A+ LA + HA +TP+H+A + GL R+A +++ +A C
Sbjct: 9 TQKVNEVLDSAINLATEQQHATLTPIHLAIVLFEEPQGLARSAAVRAGGE----EAWRSC 64
Query: 73 FNVA---LNRLPASTSTP--MLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
V LN+LP +P ++ G F ++ A R A+
Sbjct: 65 TRVLRRRLNKLPRVEPSPSTVVPGRELFKLLAAATKTQKDRGDAY--------------- 109
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ + L+ +++ P VS + EAG S Q++S +++ + + P++S + ++N
Sbjct: 110 --LGADTLLGAVIATPEVSESLAEAGVSRAQLESALQE---VRKTGGNGPLNS-PTADAN 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L + + + R DP+ R++++ V+ L + K N V++G+ +V
Sbjct: 164 FDALCKYGTDMTANAARA--DPVIGRDDEIRRVVRVLCRRTKNNPVLIGDPGVGKTAIVE 221
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I KGDVPE L+ V+ + L + S R E E+R+ + V+ GR +VL
Sbjct: 222 GLAQRIVKGDVPETLQGVRLIALDMGSLVAGAKFRGEFEERLRAVLTEVQQQAGR-VVLF 280
Query: 304 LGDL 307
+ +L
Sbjct: 281 IDEL 284
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + ++ + L L AL+++V Q+ V +A+ VL+ R+G R +
Sbjct: 552 VSRLRQAECDKLMELRAALQRRVVGQEAAVGAVADAVLRARAGLAARN---------RGS 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR-DEQ 716
++LF G K ++AK LA L+F + I + + R+ SR
Sbjct: 603 SFLFL-GPTGVGKTELAKALAELLFDDERMLIRIDMGEYME---------RHSVSRLIGA 652
Query: 717 SCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y+ + AEAV P+ V L ++VE+A ++ GR+ S G V+
Sbjct: 653 PPGYVGHEEGGQLAEAVRRRPYSVVLFDEVEKAHAEVFNVLLSILDDGRVTDSKGRTVNF 712
Query: 772 GDAIVILS 779
+ ++IL+
Sbjct: 713 ANTVIILT 720
>gi|294790548|ref|ZP_06755706.1| ATP-dependent chaperone protein ClpB [Scardovia inopinata F0304]
gi|294458445|gb|EFG26798.1| ATP-dependent chaperone protein ClpB [Scardovia inopinata F0304]
Length = 879
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 151/369 (40%), Gaps = 42/369 (11%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQ 65
++ + T A + A+ A G+ QV P+H+ + +L G+++ ++ + P
Sbjct: 1 MSMDEKFTTLAQEAIGDALQTASAAGNPQVEPIHLLDALLRQDGGVVKGLIKETGADP-- 58
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
+A+ AL LPA++ G P+ S L A+ NQ L
Sbjct: 59 -QAIGGDTRRALVNLPAAS-----GSSTTQPSASRQLSVVLSEAK---------NQMTSL 103
Query: 126 LAVKIELEQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
I E L+I++ + ++R AG S +++ V Q + + K+
Sbjct: 104 GDDYISTEHLLIALAMGQNEAGEILRTAGASPEELRKAVPQVRGGARVTSPDAEGTYKAL 163
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E L++ A K LDP+ R+ ++ VI+ L + K N V++GE
Sbjct: 164 EKYSTDLTEQAREGK-------LDPVIGRDAEIRRVIQILSRRTKNNPVLIGEPGVGKTA 216
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGI 300
VV G+ ++ GDVP L++ K + L +SS + R E E+R++ + + ++ G
Sbjct: 217 VVEGLAQRVVAGDVPTGLKNKKIVSLDMSSMVAGSKYRGEFEERMKAVLDEIKKA--NGT 274
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR 360
++ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 IITFIDEIHTIVGAGATEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYRE 323
Query: 361 CKSGHPSLE 369
P+LE
Sbjct: 324 NIEKDPALE 332
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + + +E L ++ + L K+V QK+ V +++ V + R+G S+
Sbjct: 564 VGRLMQGENEKLLTMEDQLSKRVVGQKEAVRAVSDAVRRSRAGI----------SDPDRP 613
Query: 658 TWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
T F F G K ++AK LA +F V I +S + + S
Sbjct: 614 TASFLFLGPTGVGKTELAKALADFLFDDERAIVRIDMSEYMEKESVSRLIG--------A 665
Query: 717 SCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 666 APGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDF 725
Query: 772 GDAIVILSC 780
+ I+I++
Sbjct: 726 KNTILIMTS 734
>gi|414172088|ref|ZP_11426999.1| chaperone ClpB [Afipia broomeae ATCC 49717]
gi|410893763|gb|EKS41553.1| chaperone ClpB [Afipia broomeae ATCC 49717]
Length = 879
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 31/301 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L S GL + ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAMRDGHQQFSPLHLLKVLLDDSEGLAGSLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
ALN+LP + GG Q ++ L AF A+ + + +
Sbjct: 64 TEDALNKLPKVSG----GGAGQV-YLAPELARAFDAAEKAAEKAGDSF---------VTV 109
Query: 133 EQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+L++ + D + ++ + G ++ + + +E +T ++ + +
Sbjct: 110 ERLLLGLAMDTNGEAGAILSKGGVTAQNLNAAIEALRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N +++GE +V G+
Sbjct: 170 LTQAAHDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPLLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+L+D K L L + + R E E+R++ + V S G GI+L + +
Sbjct: 223 LRIVNGDVPESLKDKKLLSLDMGALIAGAKYRGEFEERLKAVLQEVTSAEG-GIILFIDE 281
Query: 307 L 307
+
Sbjct: 282 M 282
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL K+V Q + V +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLKMEEALGKRVVGQAEAVRAVATAVRRSRAGLQDPNRPIGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|269926323|ref|YP_003322946.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
gi|269789983|gb|ACZ42124.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
Length = 867
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 33/304 (10%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
+G T +A + QA A R H+Q+ P H+ +L G++ + S P + +
Sbjct: 4 EGWTEKAREALIQAQREAENRSHSQIQPEHLLYALLTQENGIVPAVIRSAGSSP---EDV 60
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
L+RLP + T G P +S + A + AQ Q
Sbjct: 61 VRVLEAELSRLPRVSGT---GVQVYLSPVLSRIISNAEREAQQMQDE------------- 104
Query: 129 KIELEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ E L++++ +D + R++R G ++ V QA+S SQ ++ + E
Sbjct: 105 YLSTEHLLLALCEDMGTAGRILRSRGLD----RNTVLQALSKVRGSQKV---TDPNPEEK 157
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L + + LDP+ R+E++ VI+ L + K N V++GE +V
Sbjct: 158 YQALEKYGRDLTALAEQGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I +GDVPE+L++ + + L ++ R E E+R++ + V S G+ I+L
Sbjct: 218 GLAQRIVRGDVPESLKNCRIIQLDLAGMVAGTKFRGEFEERLKAVLKEVTSSEGK-IILF 276
Query: 304 LGDL 307
+ +L
Sbjct: 277 IDEL 280
>gi|222081552|ref|YP_002540916.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
gi|221726231|gb|ACM29320.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 870
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R G+ Q TPLH+ +L S GL +S + +A+
Sbjct: 7 TDRARGFIQSAQSLATREGNQQFTPLHILKVLLDDSEGLAGGLIDRSGGN---SRAILSS 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG----SIENQQQPL 125
AL +LP T G Q P + AA QA ++ G ++E Q L
Sbjct: 64 TEDALVKLPKVTGA----GAGQVYLAPETARLFTAA---EQAAEKAGDSFVTVERLLQAL 116
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+A K +++ + G + Q+ + + ++ ++ + +
Sbjct: 117 VADK------------HGEAGKLLAQGGVNPQQLNAAINALRKGRTADSASAENAYDALK 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+Q A +K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 165 KYARDLTQAARDSK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAI 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVPE+L+D K L L + + R E E+R++ + V S G GI+
Sbjct: 218 VEGLALRIVNGDVPESLKDKKLLALDLGALIAGAKYRGEFEERLKAVLQEVTSAAG-GII 276
Query: 302 LNLGDL 307
L + ++
Sbjct: 277 LFIDEM 282
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 84/227 (37%), Gaps = 29/227 (12%)
Query: 566 IPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY-------VHKFKELNSENLTSLCNALEK 618
IPE + + ++ NS+ T ++D + V K E + L + L K
Sbjct: 508 IPELEKKLAAVEASENSSITETVTADNIAQVVSRWTGVPVDKMLEGEKDKLLHMEEMLGK 567
Query: 619 KVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAK 675
+V Q V ++ V + R+G R G F F G K ++AK
Sbjct: 568 RVVGQAQAVRAVSTAVRRARAGLQDPSRPIGSF------------MFLGPTGVGKTELAK 615
Query: 676 ELARLVFGSHNNFVSIALSSFSSTR--ADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPH 733
LA +F V I +S F A DE EAV P+
Sbjct: 616 ALAEFMFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGV-----LTEAVRRRPY 670
Query: 734 RVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+V L +++E+A + ++ GR+ G V + ++I++
Sbjct: 671 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTS 717
>gi|115351836|ref|YP_773675.1| ATPase [Burkholderia ambifaria AMMD]
gi|172060806|ref|YP_001808458.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
gi|115281824|gb|ABI87341.1| ATPase AAA-2 domain protein [Burkholderia ambifaria AMMD]
gi|171993323|gb|ACB64242.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
Length = 865
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQHDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSL-----EICSQSTPVSSNKSKE 185
E ++++ DD ++ R+ G S + ++E A++ ++ SQ S ++ +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGLS----RKSLEAAIAAVRGGSQVHSQDAE-SQREALK 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 216 VEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIV 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|399115587|emb|CCG18390.1| Type VI secretion ClpV1 ATPase [Taylorella equigenitalis 14/56]
Length = 941
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 137/643 (21%), Positives = 234/643 (36%), Gaps = 112/643 (17%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+E++ +++ LM +R+ N ++ GE VV G ++ KGDVPE LRDV
Sbjct: 203 IDPVSGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFALRLAKGDVPETLRDVT 262
Query: 265 CLPLSISSFRHMNRV--EVEQR----VEEIK----------------------------- 289
L I + + E E R ++E++
Sbjct: 263 LYLLDIGLLQAGASMKGEFESRLRSVIDEVQSSEKPIVLFIDEIHTLVGAGGAQGTGDAA 322
Query: 290 NLVRSCLGRGIVLNLGDLEWAEFRASSSEQ---VRGYYCSIEHIIMEIGKLVCGIGENAR 346
NL++ L RG + +G WAE++ + R + H E E A
Sbjct: 323 NLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPNE---------EKAL 373
Query: 347 FWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT-TDSDLQSQSTSKKA 404
L GI+ +++ + ++E L IPA L I D+ + S+ A
Sbjct: 374 IMLRGISEPLENHHKVLLLDEAIEAAVRLSHRYIPARQLPDKAIALLDTACARVAVSQYA 433
Query: 405 ESG--------VSWLLFEGEEENKQLTCCADCSAKF---EAEARSLQSSSCNSDSPTSSL 453
E + +L E E ++ D S + E E +L+ D+ S
Sbjct: 434 EPAALEDTRRTIEYLNTEREIALREQKLGHDKSERLEEIEKELDTLEERQKELDAKWSEE 493
Query: 454 PAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSST 513
+++ +K N D KK SI K P +L+ ++ P+ +T
Sbjct: 494 KELIKKIFELRKIIQENTDLSR------KKSKSIPTEPAKNPELQADSLSEEASQPTEAT 547
Query: 514 SGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEA-SDKSTSEPSLRLYIPEHKDL 572
A EPK+ E S EA K SE L E +D+
Sbjct: 548 Q------------------AEEEPKEHVSED----SKEAPKSKKLSEKELDEVRKELRDV 585
Query: 573 KQPLSSNRNSTPNSTSSSDIMEMEY---------VHKFKELNSENLTSLCNALEKKVPWQ 623
+Q L + P S D + V + + + ++ +L + LEK+V Q
Sbjct: 586 QQKLLEKQGEYPLIFPSVDGNAVASVVADWTGIPVGRMVKNEANSILTLADTLEKRVIGQ 645
Query: 624 KDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFG 683
+ + I + R+ K D + K G K + A LA ++G
Sbjct: 646 RHGLETIVKRIQTSRA-------KLTDPN--KPVGVFLLTGPSGVGKTETALALAESLYG 696
Query: 684 SHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQ 743
N ++I +S F ST + EAV P+ V L+++VE+
Sbjct: 697 GEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVL---TEAVRRRPYSVVLLDEVEK 753
Query: 744 ADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSR 786
A + F + + G + G + + ++IL+ + R
Sbjct: 754 AHPDVHEIFFQVFDKGFMEDGEGRYIDFKNTVIILTSNVGTDR 796
>gi|170703405|ref|ZP_02894181.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
gi|170131681|gb|EDT00233.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
Length = 865
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQHDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSL-----EICSQSTPVSSNKSKE 185
E ++++ DD ++ R+ G S + ++E A++ ++ SQ S ++ +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGLS----RKSLEAAIAAVRGGSQVHSQDAE-SQREALK 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 216 VEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIV 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|162147426|ref|YP_001601887.1| chaperone clpB [Gluconacetobacter diazotrophicus PAl 5]
gi|161786003|emb|CAP55585.1| Chaperone clpB [Gluconacetobacter diazotrophicus PAl 5]
Length = 847
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 37/300 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T + ++ A T+A R H Q+TP H+ +L A++ L+R A Q+
Sbjct: 6 FTERSRGFLQAAQTIAVRDYHQQLTPEHLLKALLDDPEGAASSLIRAAGGQA-------P 58
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A++ AL ++P + GG P + LV AQ ++ E Q
Sbjct: 59 AVQAAVEAALAKVPR-----VQGGGAGQPQATPDLVRLLDAAQTAAQKAGDEYVAQ---- 109
Query: 128 VKIELEQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
++L+++I D R +R+ G ++ +++AV+ + V+S ++ S
Sbjct: 110 -----DRLLVAIAASDTPAGRALRDGGATA----QALDKAVA--AIRKGRTVTSENAEAS 158
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ T++++ + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 159 FDALKKYARDVTEIAQ-QGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEAL++ K L L + + R E E+R++ + + S G+ I+
Sbjct: 218 EGLALRIVNGDVPEALKNKKLLSLDLGALVAGAKFRGEFEERLKAVLKEIESAEGQVILF 277
>gi|61679301|gb|AAX52929.1| ClpB [Bifidobacterium breve UCC2003]
Length = 894
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + P +
Sbjct: 6 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDP---Q 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 63 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 108
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 109 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 168
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 169 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 221
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 222 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 279
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 280 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 328
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 329 IEKDPALE 336
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 564 VGRLMQGENEKLLHMEDYLSKRVIGQKEAIATVSDAVRRSRAGISDPNRPTGSF------ 617
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 618 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 664
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 665 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 724 DFKNTILIMTS 734
>gi|312115440|ref|YP_004013036.1| ATP-dependent chaperone ClpB [Rhodomicrobium vannielii ATCC 17100]
gi|311220569|gb|ADP71937.1| ATP-dependent chaperone ClpB [Rhodomicrobium vannielii ATCC 17100]
Length = 866
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 27/300 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R GH ++TP H+ +L S GL +S P A
Sbjct: 6 LTDRSKGFFQSAQSLALREGHQRLTPEHLLKVLLDDSEGLAAGLIAKSGGRPEDALA--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL ++P S G P ++ L A K A+ + S ++ LLA+ +E
Sbjct: 63 RVEQALAKIP-KVSGQGAGQIYIAPELARVLDQAEKIAE--KSGDSFITVERLLLALAME 119
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
D S+++ E+G + T + + + + + + S E L
Sbjct: 120 ---------KDAQTSKILAESGATPTGLNAAINDL-------RKGRTADSASAEQAYDAL 163
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + + LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 164 KRYARDLTDAAAKGQLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAL 223
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+LRD K L L + + R E E+R++ + + + + G G+VL + +L
Sbjct: 224 RIVNGDVPESLRDKKLLALDMGALIAGAKYRGEFEERLKAVLSEITAAAG-GVVLFIDEL 282
>gi|339479979|gb|ABE96446.1| ClpB protein [Bifidobacterium breve UCC2003]
Length = 889
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLSKRVIGQKEAIATVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|392374139|ref|YP_003205972.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258591832|emb|CBE68133.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 865
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++QA LA + H + H+ ++ + G+++ + + P Q +
Sbjct: 9 FTFKAQEAIQQAQKLAEQLEHQAIDVEHLLLALVQQAEGVVQPILGKMGTDPRQVAS--- 65
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L RLP + P H P + L AA A+ ++++ +
Sbjct: 66 RLTEELKRLPRVSGLPPGQVHIT-PRLEKVLSAALSEAE------RLKDEY-------VS 111
Query: 132 LEQLIISILD--DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L+++I D +V RV+REAG + + + +++ + + P ++ E
Sbjct: 112 TEHLLLAIADAGGGAVGRVLREAGITKDTIYAALQEVRGSQRVTDQVPEEKYQALERYAR 171
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+ A K LDP+ R++++ V++ L + K N V++GE +V G+
Sbjct: 172 DLTDLARKGK-------LDPVIGRDDEIRRVVQVLARRTKNNPVLIGEPGVGKTAIVEGL 224
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I GDVPE+L++ + L L I +
Sbjct: 225 AQRIVNGDVPESLKNKRVLALDIGAL 250
>gi|213693220|ref|YP_002323806.1| ATPase AAA [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM
1222]
gi|384200448|ref|YP_005586191.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|213524681|gb|ACJ53428.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320459400|dbj|BAJ70021.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
Length = 890
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|338973153|ref|ZP_08628522.1| ClpB protein [Bradyrhizobiaceae bacterium SG-6C]
gi|338233725|gb|EGP08846.1| ClpB protein [Bradyrhizobiaceae bacterium SG-6C]
Length = 877
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A TLA R GH Q TPLH+ +L S GL +S + +A+ ALN+
Sbjct: 14 IQSAQTLAMREGHQQFTPLHILKVLLDDSEGLAGGLIDRSGGN---SRAILKATEDALNK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG----SIENQQQPLLAVKIELEQL 135
+P S G P + A AA QA ++ G ++E Q L A K
Sbjct: 71 MP-KVSGAGAGQVYLAPATARAFDAA---EQAAEKAGDSFVTVERLLQALAADK------ 120
Query: 136 IISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
D ++ + G + N+ A++ + + + S E+ L + A
Sbjct: 121 ------DSDAGALLAKGGVTP----QNLNAAIN---ALRKGRTADSASAENAYDALKKYA 167
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
+ LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 168 RDLTEAAHDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIIN 227
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE+L+D K L L + + R E E+R++ + + V S G+ I+
Sbjct: 228 GDVPESLKDKKVLSLDMGALIAGAKYRGEFEERLKAVLSEVTSSDGQIILF 278
>gi|336176689|ref|YP_004582064.1| ATP-dependent chaperone ClpB [Frankia symbiont of Datisca
glomerata]
gi|334857669|gb|AEH08143.1| ATP-dependent chaperone ClpB [Frankia symbiont of Datisca
glomerata]
Length = 864
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 34/297 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPL-QCKALE 70
LTA + + A++ A G V PLH+ +L+ TG + L++ P+ Q +A
Sbjct: 6 LTARSQEALSSAVSRATGDGSPLVDPLHLLVAVLS-QTGGVAVDLLEAVDAPVPQVRA-- 62
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
A++RLP +T G P +S L+ A+ R E
Sbjct: 63 -RAEAAVSRLPHAT-----GASVAPPQLSRQLITVLDNAERQANRLGDEYTS-------- 108
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKS--NVEQAVSLEICSQSTPVSSNKSKESN 187
+E L++++ ++ SRV+ E G SS ++ ++ + + S+ P S ++ +
Sbjct: 109 -VEHLLVALAEEGGEASRVLTEFGASSEALRGAFDIVRGGVHRVTSRD-PEGSYRALDKY 166
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A K LDP+ R+ + V++ L + K N V++GE +V
Sbjct: 167 SVDLTEQARAGK-------LDPVIGRDAKIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVE 219
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGI 300
G+ ++ GDVPE+LR + + L + S +++ E E+R+ + N +RS GR I
Sbjct: 220 GLALRVVAGDVPESLRGRRIVSLDLGSMVAGSKLRGEFEERLRAVLNEIRSAEGRLI 276
>gi|384197880|ref|YP_005583624.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333110632|gb|AEF27648.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 894
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + P +
Sbjct: 6 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGGP---Q 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 63 AIGAAVRNALVALPSAS-----GSSTSPPQASRQLTAAIAQA---------EKEMQQMGD 108
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 109 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 168
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 169 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 221
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 222 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 279
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 280 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 328
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 329 IEKDPALE 336
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 26/190 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 564 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 617
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F V I +S + S +R
Sbjct: 618 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVG 671
Query: 711 RSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
+ Q EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 672 YEQGGQ-------LTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVD 724
Query: 771 LGDAIVILSC 780
+ I+I++
Sbjct: 725 FKNTILIMTS 734
>gi|299132195|ref|ZP_07025390.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2]
gi|298592332|gb|EFI52532.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2]
Length = 877
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q +PLH+ +L GL ++ + +A+ AL +
Sbjct: 14 IQSAQSLALREGHQQFSPLHILKVLLDDPEGLAGGLIDRAGGN---SRAILQATEQALAK 70
Query: 80 LPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAVKIELEQL 135
LP + GG Q P + A AA QA ++ G S ++ LLA+ ++
Sbjct: 71 LPKVSG----GGAGQIYLAPETARAFTAA---EQAAEKAGDSFVTVERLLLALTLD---- 119
Query: 136 IISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
D ++ + G + + + + ++ ++ + + L+Q A
Sbjct: 120 -----KDSEAGNLLAKGGVTPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAA 174
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
K LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 175 REGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILN 227
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE+L+D K L L + + R E E+R++ + V S G GI+L
Sbjct: 228 GDVPESLKDKKLLSLDLGAMVAGAKYRGEFEERLKAVLQEVTSAEG-GIIL 277
>gi|291457035|ref|ZP_06596425.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|291380870|gb|EFE88388.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve DSM
20213 = JCM 1192]
Length = 894
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + P +
Sbjct: 6 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDP---Q 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 63 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 108
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 109 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 168
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 169 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 221
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 222 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 279
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 280 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 328
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 329 IEKDPALE 336
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 564 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 617
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 618 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 664
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 665 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 724 DFKNTILIMTS 734
>gi|406830251|ref|ZP_11089845.1| ATP-dependent chaperone ClpB [Schlesneria paludicola DSM 18645]
Length = 871
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT +A ++ A A +GHAQ+ PLH+ +L G+++ + Q + +
Sbjct: 8 LTVKAQEALQSAQQSAESQGHAQLVPLHLLKALLDEQGGIVKPLLEKVGIRVPQLRGI-- 65
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L +LP S+ G S A+ +A +Q + +
Sbjct: 66 -VEADLAKLPRSSGGGQTGA-------SQAIRQVLDKAA---------DQADAMKDAFVS 108
Query: 132 LEQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L+I++ L D RV++ G + V S ++ + + P ++ E
Sbjct: 109 TEHLLIALTLVDDQAQRVLKLNGVTEADVLSALKTVRGSQSVTDQNPEDKYQALEKYGKD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L A A K+ DP+ R++++ VI+ L +RK N V++G+ +V G+
Sbjct: 169 LVALAQAGKI-------DPVIGRDQEIRRVIQVLSRRRKNNPVLIGDAGVGKTAIVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP+ L+D + + L + + R E E R++ + V GR I+
Sbjct: 222 HRIVMGDVPQNLKDKRVIALDMGALIAGAKYRGEFEDRLKAVLKEVSEADGRVILF 277
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + L + + + +++ Q + V +AN V + RSG R G F
Sbjct: 560 VSRLLQTEKTKLLEMEDHIHRRMIDQSEAVTAVANAVRRSRSGLQDPHRPIGSF------ 613
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V I +S F S R
Sbjct: 614 ------IFLGPTGVGKTELCKALAEFLFDDERAMVRIDMSEFMEKHSVARLIGAPPG--- 664
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L++++E+A + ++ GR+ S G
Sbjct: 665 ------YVGYEEGGKLTEAVRRRPYSVLLLDEIEKAHRDVFNVLLQLLDDGRLTDSHGRT 718
Query: 769 VSLGDAIVILSC 780
V + IV+++
Sbjct: 719 VDFTNTIVVMTS 730
>gi|255655991|ref|ZP_05401400.1| chaperone [Clostridium difficile QCD-23m63]
gi|296450582|ref|ZP_06892335.1| chaperone protein ClpB [Clostridium difficile NAP08]
gi|296879299|ref|ZP_06903294.1| chaperone protein ClpB [Clostridium difficile NAP07]
gi|296260426|gb|EFH07268.1| chaperone protein ClpB [Clostridium difficile NAP08]
gi|296429842|gb|EFH15694.1| chaperone protein ClpB [Clostridium difficile NAP07]
Length = 864
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 136/610 (22%), Positives = 234/610 (38%), Gaps = 102/610 (16%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ +I L + K N V++GE +V G+ ++I +GDVPE L+D
Sbjct: 182 LDPVIGRDEEIRRIIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKDKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
L + + R E E+R++ + V+S G+ I+L + ++ A +E
Sbjct: 242 VFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGK-IILFIDEIHTI-VGAGKTEGS-- 297
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAG 382
M+ G L+ + +G TF Y + +LE + P
Sbjct: 298 ---------MDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQ------PVI 342
Query: 383 SLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSS 442
+ ++ T S L+ + GV + + A S ++ + R L
Sbjct: 343 AEEPTVEDTISILRGLKERFEIHHGVRI-------HDNAIVAAAKLSNRY-IQDRFLPDK 394
Query: 443 SCN--------SDSPTSSLPAWLQQYK-------NEKKATLSNNDKDSGVR--DLCKKWN 485
+ + S SLP L + E++A L ND S R D+ K+
Sbjct: 395 AIDLIDEAGAMIRSEIDSLPTELDVVRRKLFTLETEREALLKENDDKSKSRLDDIQKEIA 454
Query: 486 SIC--NSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
+ N Y E++ + K D A + ++ RE
Sbjct: 455 ELKSKNDEMTAKYEKEKSQILDIKN-----------------LKAQLDEAKGKAEKYERE 497
Query: 544 HHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY------ 597
+ F + A K P L + +KQ + + + NS ++ E E
Sbjct: 498 YDF--NKAAEVKYGEIPKL------EEQIKQYEENMNDGSENSLLKEEVTEEEISSIVSK 549
Query: 598 -----VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHS 652
V K E E L L + L K+V Q + V ++N V++ R+G KD
Sbjct: 550 WTGIPVTKLVEGEREKLLKLEDELHKRVIGQDEAVTAVSNAVIRARAG-------LKD-- 600
Query: 653 EVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRS 712
E K F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 601 ERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVS-----RLVG 655
Query: 713 RDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Y E + EAV P+ V L +++E+A F + ++ GR+ + G V
Sbjct: 656 PPPGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGKTVD 715
Query: 771 LGDAIVILSC 780
+ ++I++
Sbjct: 716 FKNTLIIMTS 725
>gi|86743031|ref|YP_483431.1| ATPase [Frankia sp. CcI3]
gi|86569893|gb|ABD13702.1| ATPase AAA-2 [Frankia sp. CcI3]
Length = 869
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + + A++ A G V PLH+ N +L AS G+ A L S + +
Sbjct: 6 LTARSQEALSAAISRATADGSPLVDPLHLLNALLEASDGV-GAALLASAGTSVDT--VRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP +T G P +S L+A A E Q L
Sbjct: 63 RAEAAVTRLPRAT-----GLSVSPPQLSRQLIAVLNNA---------ERQAGQLGDEYTS 108
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQ--AVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ R++ AG + ++ E+ + + S+ P S ++ E
Sbjct: 109 VEHLVVALAEEGGEAGRILTSAGATPDALRGAFEKVRGGARRVTSRD-PEGSYRALEKYS 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R+ ++ VI+ L + K N V++GE +V G
Sbjct: 168 IDLTERAQQGK-------LDPVIGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVLNL 304
+ ++ GDVPE+LR + + L + S +++ E E+R+ + N +R G+ I+ +
Sbjct: 221 LALRVVAGDVPESLRGRRIVSLDLGSMVAGSKLRGEFEERLTSVLNEIREAEGQ-IITFI 279
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A ++E M+ G ++ + ++G T + Y
Sbjct: 280 DELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLEEYRTRIEK 327
Query: 365 HPSLE 369
P+LE
Sbjct: 328 DPALE 332
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 18/184 (9%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
+ E + L + +AL +V Q D V +++ V + R+G R G F
Sbjct: 556 RLLEGETAKLLRMESALHARVIGQDDAVRAVSDAVRRARAGIADPDRPTGSF-------- 607
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K ++AK LA +F V I +S ++ + + +
Sbjct: 608 ----LFLGPTGVGKTELAKALADFLFDDERAIVRIDMSEYAEKHSVARLIGAPPGYVGFE 663
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
S + EA+ P+ V L+++VE+A + ++ GR+ G V + I+
Sbjct: 664 SGG---QLTEAIRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTIL 720
Query: 777 ILSC 780
IL+
Sbjct: 721 ILTS 724
>gi|107028974|ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116689868|ref|YP_835491.1| ATPase [Burkholderia cenocepacia HI2424]
gi|105898138|gb|ABF81096.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
gi|116647957|gb|ABK08598.1| ATPase AAA-2 domain protein [Burkholderia cenocepacia HI2424]
Length = 865
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSL-----EICSQSTPVSSNKSKE 185
E ++++ DD ++ R+ G + + ++E A++ ++ SQ S ++ +
Sbjct: 108 SEMFLLAVSDDKGDAGKLARQHGLT----RKSLEAAIAAVRGGSQVHSQDAE-SQREALK 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 216 VEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIV 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|431805629|ref|YP_007232530.1| ClpB protein [Liberibacter crescens BT-1]
gi|430799604|gb|AGA64275.1| ClpB protein [Liberibacter crescens BT-1]
Length = 872
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 18 SVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVAL 77
S ++ + T A +GH Q+ P H+ ML S G+ A L K L C L
Sbjct: 12 SYLQTSQTYALEQGHQQLIPEHILYVMLEDSQGM---ASLLIERAGGDIKKLSTCNKAIL 68
Query: 78 NRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLII 137
++LP T G Q IS LV F +A+ ++ + +E+L++
Sbjct: 69 SKLPKIT-----GSDVQV-YISQNLVTLFSKAEEISKKAGDSF---------VTVERLLL 113
Query: 138 SILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
++ S++++++++G + N+ + ++ EI S+N E L + A
Sbjct: 114 AMASPKSSLAQLLKDSGITF----DNLNKVIN-EIRKGRVADSANA--EERFDSLKKYAR 166
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
V LDP+ R++++ I+ L + K N V++GE +V G+ +I G
Sbjct: 167 DLTVEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIING 226
Query: 255 DVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
DVPE L+D K + L + + ++ E E+R++ + N ++S G G++L + ++
Sbjct: 227 DVPETLKDKKLMALDMGALIAGTKMRGEFEERLKALLNEIQSENG-GVILFIDEM 280
>gi|161524599|ref|YP_001579611.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189350645|ref|YP_001946273.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|160342028|gb|ABX15114.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
gi|189334667|dbj|BAG43737.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
Length = 865
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV +LA G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALLAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNDAIARLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|170733207|ref|YP_001765154.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
gi|169816449|gb|ACA91032.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
Length = 865
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSL-----EICSQSTPVSSNKSKE 185
E ++++ DD ++ R+ G + + ++E A++ ++ SQ S ++ +
Sbjct: 108 SEMFLLAVSDDKGDAGKLARQHGLT----RKSLEAAIAAVRGGSQVHSQDAE-SQREALK 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 216 VEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIV 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|423082740|ref|ZP_17071329.1| ATP-dependent chaperone protein ClpB [Clostridium difficile
002-P50-2011]
gi|423086966|ref|ZP_17075356.1| ATP-dependent chaperone protein ClpB [Clostridium difficile
050-P50-2011]
gi|357545549|gb|EHJ27520.1| ATP-dependent chaperone protein ClpB [Clostridium difficile
050-P50-2011]
gi|357547858|gb|EHJ29733.1| ATP-dependent chaperone protein ClpB [Clostridium difficile
002-P50-2011]
Length = 864
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 136/610 (22%), Positives = 234/610 (38%), Gaps = 102/610 (16%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ +I L + K N V++GE +V G+ ++I +GDVPE L+D
Sbjct: 182 LDPVIGRDEEIRRIIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKDKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
L + + R E E+R++ + V+S G+ I+L + ++ A +E
Sbjct: 242 VFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGK-IILFIDEIHTI-VGAGKTEGS-- 297
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAG 382
M+ G L+ + +G TF Y + +LE + P
Sbjct: 298 ---------MDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQ------PVI 342
Query: 383 SLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSS 442
+ ++ T S L+ + GV + + A S ++ + R L
Sbjct: 343 AEEPTVEDTISILRGLKERFEIHHGVRI-------HDNAIVAAAKLSHRY-IQDRFLPDK 394
Query: 443 SCN--------SDSPTSSLPAWLQQYK-------NEKKATLSNNDKDSGVR--DLCKKWN 485
+ + S SLP L + E++A L ND S R D+ K+
Sbjct: 395 AIDLIDEAGAMIRSEIDSLPTELDVVRRKLFTLETEREALLKENDDKSKSRLDDIQKEIA 454
Query: 486 SIC--NSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
+ N Y E++ + K D A + ++ RE
Sbjct: 455 ELKSKNDEMTAKYEKEKSQILDIKN-----------------LKAQLDEAKGKAEKYERE 497
Query: 544 HHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY------ 597
+ F + A K P L + +KQ + + + NS ++ E E
Sbjct: 498 YDF--NKAAEVKYGEIPKL------EEQIKQYEENMNDGSENSLLKEEVTEEEISSIVSK 549
Query: 598 -----VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHS 652
V K E E L L + L K+V Q + V ++N V++ R+G KD
Sbjct: 550 WTGIPVTKLVEGEREKLLKLEDELHKRVIGQDEAVTAVSNAVIRARAG-------LKD-- 600
Query: 653 EVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRS 712
E K F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 601 ERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVS-----RLVG 655
Query: 713 RDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Y E + EAV P+ V L +++E+A F + ++ GR+ + G V
Sbjct: 656 PPPGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGKTVD 715
Query: 771 LGDAIVILSC 780
+ ++I++
Sbjct: 716 FKNTLIIMTS 725
>gi|421866946|ref|ZP_16298608.1| ClpB protein [Burkholderia cenocepacia H111]
gi|358073110|emb|CCE49486.1| ClpB protein [Burkholderia cenocepacia H111]
Length = 865
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGDAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|126699637|ref|YP_001088534.1| Chaperone protein [Clostridium difficile 630]
gi|255101151|ref|ZP_05330128.1| chaperone [Clostridium difficile QCD-63q42]
gi|255307025|ref|ZP_05351196.1| chaperone [Clostridium difficile ATCC 43255]
gi|423089174|ref|ZP_17077536.1| ATP-dependent chaperone protein ClpB [Clostridium difficile
70-100-2010]
gi|115251074|emb|CAJ68905.1| Chaperone protein [Clostridium difficile 630]
gi|357558537|gb|EHJ40029.1| ATP-dependent chaperone protein ClpB [Clostridium difficile
70-100-2010]
Length = 864
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 136/610 (22%), Positives = 234/610 (38%), Gaps = 102/610 (16%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ +I L + K N V++GE +V G+ ++I +GDVPE L+D
Sbjct: 182 LDPVIGRDEEIRRIIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKDKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
L + + R E E+R++ + V+S G+ I+L + ++ A +E
Sbjct: 242 VFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGK-IILFIDEIHTI-VGAGKTEGS-- 297
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAG 382
M+ G L+ + +G TF Y + +LE + P
Sbjct: 298 ---------MDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQ------PVI 342
Query: 383 SLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSS 442
+ ++ T S L+ + GV + + A S ++ + R L
Sbjct: 343 AEEPTVEDTISILRGLKERFEIHHGVRI-------HDNAIVAAAKLSHRY-IQDRFLPDK 394
Query: 443 SCN--------SDSPTSSLPAWLQQYK-------NEKKATLSNNDKDSGVR--DLCKKWN 485
+ + S SLP L + E++A L ND S R D+ K+
Sbjct: 395 AIDLIDEAGAMIRSEIDSLPTELDVVRRKLFTLETEREALLKENDDKSKSRLDDIQKEIA 454
Query: 486 SIC--NSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
+ N Y E++ + K D A + ++ RE
Sbjct: 455 ELKSKNDEMTAKYEKEKSQILDIKN-----------------LKAQLDEAKGKAEKYERE 497
Query: 544 HHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY------ 597
+ F + A K P L + +KQ + + + NS ++ E E
Sbjct: 498 YDF--NKAAEVKYGEIPKL------EEQIKQYEENMNDGSENSLLKEEVTEEEISSIVSK 549
Query: 598 -----VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHS 652
V K E E L L + L K+V Q + V ++N V++ R+G KD
Sbjct: 550 WTGIPVTKLVEGEREKLLKLEDELHKRVIGQDEAVTAVSNAVIRARAG-------LKD-- 600
Query: 653 EVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRS 712
E K F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 601 ERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVS-----RLVG 655
Query: 713 RDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Y E + EAV P+ V L +++E+A F + ++ GR+ + G V
Sbjct: 656 PPPGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGKTVD 715
Query: 771 LGDAIVILSC 780
+ ++I++
Sbjct: 716 FKNTLIIMTS 725
>gi|125578208|gb|EAZ19354.1| hypothetical protein OsJ_34905 [Oryza sativa Japonica Group]
Length = 892
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ V I ++++CRS RR + + WL F G D+
Sbjct: 485 NYKLLVERLFKVVGRQEEAVSAICESIVRCRSTESRR-------GPSRNDIWLCFHGSDS 537
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK++IA LA L+ GS N + + L+ +D + R + I+ E
Sbjct: 538 MAKKRIAVALAELMHGSKENLIYLDLN---------LQDWDDSSFRGKTG---IDCIVEQ 585
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+S V ++++++AD Q AI+SGR G V + D+IV+LS
Sbjct: 586 LSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLS 637
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 299 GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGI-ATFQS 357
G+++++GDL+ + Q G ++ E+ +++ + R W+MG AT+++
Sbjct: 47 GLIISIGDLKQLVPDEDAEAQENG-----RRVVAEVTRVLEAHSKVGRVWVMGWSATYET 101
Query: 358 YMRCKSGHPSLETLWSLH--PLTIPAGSLSLSLITTDSDLQSQST-----SKKAESGV-S 409
Y+ S P ++ W L P+T + + + L +T SK A S + S
Sbjct: 102 YLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSKPAASLMDS 161
Query: 410 WLLFEG-----EEEN-------KQLTCCADCSAKFEAEARSLQSSS--CNSDSPTSSLPA 455
++ F G EEN Q C C+ K+E E ++ S+S D LP+
Sbjct: 162 FVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAEDHHQGGLPS 221
Query: 456 WLQQY-----KNEKKATLSNNDK---DSGVRDLCKKWNSICNSIHK 493
LQ N +D+ +S + +L KKWN C +H+
Sbjct: 222 LLQNGSMMGPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQ 267
>gi|206560283|ref|YP_002231047.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|444358706|ref|ZP_21160085.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|444365745|ref|ZP_21165861.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
gi|198036324|emb|CAR52220.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
gi|443603407|gb|ELT71418.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
gi|443605667|gb|ELT73504.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
K56-2Valvano]
Length = 865
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGDAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|344303689|gb|EGW33938.1| heat shock protein Hsp104 [Spathaspora passalidarum NRRL Y-27907]
Length = 904
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 136/344 (39%), Gaps = 71/344 (20%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA-----STGLLRTACLQSHSHPLQCK 67
T A ++ A LA+ H+Q+ PLH M+ ST L+T + +
Sbjct: 7 TDNALQIITNATQLAKDNAHSQLVPLHFLAAMVPTDDTEHSTPYLKTLIQKGR---FEWA 63
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N L RLP+ + P L ++ Q + I+ QQ+
Sbjct: 64 PFERAVNKHLVRLPSQSPPP------------EDLRPSYAAGQVLTKANKIKQQQKDNY- 110
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I + +++++L+D S+ V +EAG + +K+ QA+ L + ++ S
Sbjct: 111 --IAQDHILLALLEDQSIKDVFKEAGINVDSIKT---QAIELRGSQRIDSRQADSSSSYE 165
Query: 188 VLV-----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
L L++ A K+ DP+ R E++ VI L + K N V++G+
Sbjct: 166 FLGKYCEDLTEKAREGKI-------DPVIGREEEIRRVIRVLARRTKCNSVLIGDAGVGK 218
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI---------- 288
+V GV +I GDVP L + + L + + + E E+R++ +
Sbjct: 219 TSIVEGVAQRIIDGDVPNVLANARLFALDLGALTAGAKYKGEFEERIKGVLNDIEKSKEF 278
Query: 289 -------------------KNLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G +AE+R
Sbjct: 279 IILFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 322
>gi|163848669|ref|YP_001636713.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
gi|222526605|ref|YP_002571076.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
gi|163669958|gb|ABY36324.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
gi|222450484|gb|ACM54750.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
Length = 861
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 29 RRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPM 88
R G+A+V P H+ +L S G++ + + L AL+ N ++R P M
Sbjct: 25 RLGNAEVQPEHLLYALLDQSDGVVPQVLAKLN---LPVGALKQQINNEISRFPR-----M 76
Query: 89 LGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPS--VS 146
GG Q S K AH ++ + E L+++ILD
Sbjct: 77 SGGGAQVQLGSRLRTVLIK---AHDELAQFGDEY-------VSTEHLLLAILDHAGGGAE 126
Query: 147 RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS 206
RV+++AG + ++ + + + + TP + + E L++ A+ K
Sbjct: 127 RVLKQAGLTRDKLLMVLREVRGAQRVTSPTPEGTYAALEQYGRDLTELAARNK------- 179
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ VI+ L + K N V++GE +V G+ +I +GDVPEAL++ +
Sbjct: 180 LDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEALKNKR 239
Query: 265 CLPLSISSF 273
+ L + +
Sbjct: 240 VIALDLGAL 248
>gi|344229473|gb|EGV61358.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 892
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 78/348 (22%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA----STGLLRTACLQSHSHPLQCK 67
T A ++ A LA+ H+Q+TPLH M+ S L+T +S +
Sbjct: 6 FTDNALRIINNASQLAKENAHSQLTPLHFLAAMVPTDDENSVPYLKTLIQKSR---YEWG 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N L R+P+ P + + +++ Q Q I+ QQ+
Sbjct: 63 DFERAVNKHLVRMPSQNPPP------------DDIRPSYQTGQVLQNATKIKAQQKDNY- 109
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE----ICSQSTPVSS--- 180
I + L++++L+D S+ +++E G +K+ QA+ L I S+ SS
Sbjct: 110 --IAQDHLLLALLEDSSIKDILKECGIKPDVIKT---QAIELRGNQRIDSRQADSSSSFE 164
Query: 181 --NKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGEC 236
NK E L++ A K+ DP+ R E++ VI L + K N V++GE
Sbjct: 165 FLNKYCED----LTEKAREGKI-------DPVIGREEEIRRVIRVLARRTKSNSVLIGEA 213
Query: 237 LASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI------ 288
+V GV +I GDVP L + + L + + + E E+R++ +
Sbjct: 214 GVGKTSIVEGVAQRIIDGDVPNVLANSRLFALDLGALTAGAKYKGEFEERIKGVLNEIEK 273
Query: 289 -----------------------KNLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G +AE+R
Sbjct: 274 SNEMIILFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 321
>gi|254975613|ref|ZP_05272085.1| chaperone [Clostridium difficile QCD-66c26]
gi|255093001|ref|ZP_05322479.1| chaperone [Clostridium difficile CIP 107932]
gi|255314742|ref|ZP_05356325.1| chaperone [Clostridium difficile QCD-76w55]
gi|255517416|ref|ZP_05385092.1| chaperone [Clostridium difficile QCD-97b34]
gi|255650526|ref|ZP_05397428.1| chaperone [Clostridium difficile QCD-37x79]
gi|260683626|ref|YP_003214911.1| chaperone [Clostridium difficile CD196]
gi|260687286|ref|YP_003218420.1| chaperone [Clostridium difficile R20291]
gi|306520482|ref|ZP_07406829.1| chaperone [Clostridium difficile QCD-32g58]
gi|384361253|ref|YP_006199105.1| chaperone [Clostridium difficile BI1]
gi|260209789|emb|CBA63611.1| chaperone [Clostridium difficile CD196]
gi|260213303|emb|CBE04864.1| chaperone [Clostridium difficile R20291]
Length = 864
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 136/610 (22%), Positives = 234/610 (38%), Gaps = 102/610 (16%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ +I L + K N V++GE +V G+ ++I +GDVPE L+D
Sbjct: 182 LDPVIGRDEEIRRIIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKDKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
L + + R E E+R++ + V+S G+ I+L + ++ A +E
Sbjct: 242 VFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGK-IILFIDEIHTI-VGAGKTEGS-- 297
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAG 382
M+ G L+ + +G TF Y + +LE + P
Sbjct: 298 ---------MDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQ------PVI 342
Query: 383 SLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSS 442
+ ++ T S L+ + GV + + A S ++ + R L
Sbjct: 343 AEEPTVEDTISILRGLKERFEIHHGVRI-------HDNAIVAAAKLSHRY-IQDRFLPDK 394
Query: 443 SCN--------SDSPTSSLPAWLQQYK-------NEKKATLSNNDKDSGVR--DLCKKWN 485
+ + S SLP L + E++A L ND S R D+ K+
Sbjct: 395 AIDLIDEAGAMIRSEIDSLPTELDVVRRKLFTLETEREALLKENDDKSKSRLDDIQKEIA 454
Query: 486 SIC--NSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDWAVVEPKQSWRE 543
+ N Y E++ + K D A + ++ RE
Sbjct: 455 ELKSKNDEMTAKYEKEKSQILDIKN-----------------LKAQLDEAKGKAEKYERE 497
Query: 544 HHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY------ 597
+ F + A K P L + +KQ + + + NS ++ E E
Sbjct: 498 YDF--NKAAEVKYGEIPKL------EEQIKQYEENMNDGSENSLLKEEVTEEEISSIVSK 549
Query: 598 -----VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHS 652
V K E E L L + L K+V Q + V ++N V++ R+G KD
Sbjct: 550 WTGIPVTKLVEGEREKLLKLEDELHKRVIGQDEAVTAVSNAVIRARAG-------LKD-- 600
Query: 653 EVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRS 712
E K F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 601 ERKPIGSFIFLGPTGVGKTELAKTLARNLFDSDDNIIRIDMSEYMEKHAVS-----RLVG 655
Query: 713 RDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Y E + EAV P+ V L +++E+A F + ++ GR+ + G V
Sbjct: 656 PPPGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGKTVD 715
Query: 771 LGDAIVILSC 780
+ ++I++
Sbjct: 716 FKNTLIIMTS 725
>gi|317482990|ref|ZP_07941994.1| ATP-dependent chaperone ClpB [Bifidobacterium sp. 12_1_47BFAA]
gi|316915597|gb|EFV37015.1| ATP-dependent chaperone ClpB [Bifidobacterium sp. 12_1_47BFAA]
Length = 889
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|430005294|emb|CCF21095.1| Chaperone [Rhizobium sp.]
Length = 868
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ P + + L + AL +
Sbjct: 14 LQSAQTHALSEGHQQFTPEHVLKVLLDDDQGMASSLITRAGGDPKEAR---LANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG Q +S L F A+ ++ S ++ LLA+ IE
Sbjct: 71 LPKVS-----GGGGQV-YLSQPLAKVFTTAEEAAKKAGDSFVTVERLLLALAIE------ 118
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
S S +++AG ++ + + E+ T S+N E L + A
Sbjct: 119 ---STASTSATLKKAGVTAQALNQVIN-----EVRKGRTADSANA--EQGFDALKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D K + L + S R E E+R++ + N V++ G I+
Sbjct: 229 VPESLKDKKLMALDMGSLIAGAKYRGEFEERLKAVLNEVQAESGEIILF 277
>gi|343524030|ref|ZP_08760990.1| ATP-dependent chaperone protein ClpB [Actinomyces sp. oral taxon
175 str. F0384]
gi|343399011|gb|EGV11536.1| ATP-dependent chaperone protein ClpB [Actinomyces sp. oral taxon
175 str. F0384]
Length = 893
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 151/371 (40%), Gaps = 51/371 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T ++ + AM A G+ Q+ P H+ +L + GLL C + + +A
Sbjct: 6 TTKSQEAISGAMQAAAAAGNPQIAPAHLLVELLSQPDGVAAGLLAAVCPDAAAR----QA 61
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ L +LPAS+ + M P S +L+AA + A + S E
Sbjct: 62 VGASARRILTQLPASSGSSM-----TQPQPSRSLLAALEAASTVAKELSDEY-------- 108
Query: 129 KIELEQLIISILDD------PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
I E L+I + P+V+R++ +AG + + + Q + + P + K
Sbjct: 109 -ISTEHLLIGLAKGDASGSAPTVARILADAGATPEALIEALPQVRGSSRVTSANPEGTYK 167
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ E L++ A + LDP+ R+ ++ V++ L + K N V++GE
Sbjct: 168 TLEKYGTDLTEAAREGR-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGK 220
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
VV G+ +I GDVPE+LR + + L +S R E E+R++ + ++ G
Sbjct: 221 TAVVEGLAQRIVAGDVPESLRGKRLISLDLSGMVAGAKYRGEFEERLKAVLKEIKDSDGE 280
Query: 299 GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY 358
++ + +L SE M+ G ++ + ++G T Y
Sbjct: 281 -VITFIDELHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEY 328
Query: 359 MRCKSGHPSLE 369
P+LE
Sbjct: 329 RENIEKDPALE 339
>gi|126666668|ref|ZP_01737645.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
sp. ELB17]
gi|126628713|gb|EAZ99333.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
sp. ELB17]
Length = 520
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ S + A +LA + H + PLH+ +L + ++ Q+ P + +
Sbjct: 6 LTSRLQSALADAQSLAVGKDHNFIEPLHLMQALLDQDSSSIKPLLKQAGGEPTRIR---- 61
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ + S P + G +SN + F A A +R+ + + LLA
Sbjct: 62 --QAVIKEI---ESLPEVKGSAGDVAMSNDMGRLFNIADKLAQKRKDQFVSSELMLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
++ D S+ RV+RE G ++ +E A E + + ++ + +
Sbjct: 115 --------ALEDRGSLGRVLREQGVDKAALEKAIENARGGESVDDAGAEENRQALDKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A + K LDP+ R++++ I+ L +RK N V++G+ +V G+
Sbjct: 167 DLTEMAESGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGDPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE L++ + L L + S
Sbjct: 220 AQRIVNGEVPEGLKNKRVLSLDMGSL 245
>gi|22329388|ref|NP_172200.2| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
gi|20260490|gb|AAM13143.1| unknown protein [Arabidopsis thaliana]
gi|30725704|gb|AAP37874.1| At1g07200 [Arabidopsis thaliana]
gi|332189970|gb|AEE28091.1| P-loop containing nucleoside triphosphate hydrolase domain and
Clp-N motif-containing protein [Arabidopsis thaliana]
Length = 422
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
++ SL L +KV WQ + V I+ + C++ + RR WL G D
Sbjct: 59 KDFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQA--------SGIWLALLGPD 110
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAE 726
K+K+A L+ + FG N++ + F + + R K + ++
Sbjct: 111 KVGKKKVAMTLSEVFFGGKVNYICV---DFGAEHCSLDDKFRGK--------TVVDYVTG 159
Query: 727 AVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+S PH V L+E+VE+A++ Q A+ +G+I G +S+ + IV+++
Sbjct: 160 ELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVVVT 212
>gi|218885671|ref|YP_002434992.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756625|gb|ACL07524.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 862
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 146/365 (40%), Gaps = 42/365 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + +A + A R GH QV H A ++ GL+ ++ P A
Sbjct: 6 FTEKSQQAIAEAQSTAVRLGHQQVDVEHAALALVRQEQGLVPRLLERAGYKP---DAFAG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL + PA + G ++ L A RAQ +R E +
Sbjct: 63 ALEAALQKRPAVSGPGAAQGQI---YVTQRLNQALVRAQDFAKRLKDEY---------VS 110
Query: 132 LEQLIISILDDP---SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E LI + L++P + RV RE G + ++ + +E + + P + ++ +
Sbjct: 111 VEHLICAFLEEPPSTDMGRVAREFGLTQDKLLAVLEDVRGAQRVTSQNPEDTYEALQKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A K LDP+ R+ ++ V+ L + K N V++GE +V G
Sbjct: 171 RDLVEEARKGK-------LDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I KGDVPE L++ L + + R E E+R++ + V GR IV+ +
Sbjct: 224 LAHRILKGDVPEGLKNRSLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGR-IVMFI 282
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A ++ M+ G L+ + +G T Y +
Sbjct: 283 DELHTI-VGAGKTDGA-----------MDAGNLLKPMLARGELHCIGATTLDEYRKYIEK 330
Query: 365 HPSLE 369
P+LE
Sbjct: 331 DPALE 335
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L L + L ++V Q + V +A VL+ R+G R G F
Sbjct: 552 VTRLLESEREKLLRLGDVLHERVVGQDEAVQAVAEAVLRARAGLSDPGRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S +N V I +S + A +
Sbjct: 606 ------IFLGPTGVGKTELCKTLAESLFDSEDNIVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A + ++ GR+ S G V
Sbjct: 655 PGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNVLLQILDDGRLTDSHGRTVDFK 714
Query: 773 DAIVILSCESFSS 785
+ I+I++ SS
Sbjct: 715 NTIIIMTSNIGSS 727
>gi|222615364|gb|EEE51496.1| hypothetical protein OsJ_32651 [Oryza sativa Japonica Group]
Length = 926
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ + I ++++CRS RR + + WL F G D+
Sbjct: 542 NYKLLVERLFKVVGRQEEALSAICESIVRCRSTESRRGPN-------RNDIWLCFHGSDS 594
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSC---SYIERF 724
AK++IA LA L+ GS +N + + L N + D+ S + I+
Sbjct: 595 MAKKRIAVALAELMHGSKDNLIYLDL---------------NLQDWDDSSFRGKTGIDCI 639
Query: 725 AEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
E +S V ++++++AD Q AI+SGR G V + D+IV+LS
Sbjct: 640 VEQLSKKRQSVLFLDNIDRADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLS 694
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 299 GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGI-ATFQS 357
G+++++GDL+ + Q +G ++ E+ +++ + R W+MG AT+++
Sbjct: 104 GLIISIGDLKQLVPDEDAEAQEKG-----RRVVAEVTRVLETHSKVGRVWVMGWSATYET 158
Query: 358 YMRCKSGHPSLETLWSLHPLTIPA-----------GSLSLSLITTDSDLQSQSTSKKAES 406
Y+ S P ++ W L L I A + L T S+ + +S
Sbjct: 159 YLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPATTVAAFSKPAASLMDS 218
Query: 407 GVSW--LLFEGEEEN-------KQLTCCADCSAKFEAEARSLQSSS--CNSDSPTSSLPA 455
V + L + EEN Q C C+ K+E E ++ S+S D LP+
Sbjct: 219 FVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAEDHHQGGLPS 278
Query: 456 WLQQY-----KNEKKATLSNNDK---DSGVRDLCKKWNSICNSIHK 493
LQ N + +D+ +S + +L KKWN C +H+
Sbjct: 279 LLQNGSMMGPNNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRLHQ 324
>gi|66802530|ref|XP_635137.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60463456|gb|EAL61641.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 886
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + +++ + LAR + + Q+ P+H+A T+L L ++ ++ ++
Sbjct: 8 FTDKTNTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGG---DVPKIDA 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTIS-NALVAAFKRAQA-HQRRGSIENQQQPLLAVK 129
F L + P P P IS N+L R+ A HQ+ N LAV
Sbjct: 65 GFKRLLAKQPVQNPVP--------PEISPNSLFLQVLRSAARHQK-----NNGDSHLAV- 110
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ LI+ +LDD + V+ +AG + QV QAV EI S K+ ES
Sbjct: 111 ---DHLILGLLDDRDILSVLGDAGATKEQVI----QAVK-EIRGNKKITS--KTAESTYE 160
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
LS+ LDP+ R+E++ VI L + K N V++GE VV G+
Sbjct: 161 ALSKYGYDLVSQAQEGKLDPVIGRDEEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGL 220
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
+I +GD+P+ L + + + L + + R + E+R++ + V+ G GI+L +
Sbjct: 221 AQRIVRGDIPDNL-NARVIALDMGALIAGAKYRGDFEERLKAVLKEVKDSNG-GIILFID 278
Query: 306 DL 307
++
Sbjct: 279 EI 280
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L SL + L +V Q + V +A+ VL+ +SG R
Sbjct: 550 VSKLSQTEKQRLLSLADHLHNRVVGQDEAVDAVADAVLRSKSGLARENQPLG-------- 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSR 713
++LF G K ++AK LA +F ++ V I +S + S +R +
Sbjct: 602 SFLFL-GPTGVGKTELAKALALELFDDESHMVRIDMSEYMEQHSVSRLIGAPPGYVGYDQ 660
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
Q EAV P+ V L ++VE+A + ++ GR+ G V +
Sbjct: 661 GGQ-------LTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSN 713
Query: 774 AIVILS 779
++I++
Sbjct: 714 VVIIMT 719
>gi|403509107|ref|YP_006640745.1| ATP-dependent chaperone protein ClpB [Nocardiopsis alba ATCC
BAA-2165]
gi|402798790|gb|AFR06200.1| ATP-dependent chaperone protein ClpB [Nocardiopsis alba ATCC
BAA-2165]
Length = 875
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 42/363 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + A+ A G Q PLH+ N +L + G+ R + + P K
Sbjct: 5 LTRKSQEALADAIRQATSDGSPQTEPLHLLNALLNQAEGITRPLLKEVGADPDLIKD--- 61
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ LP ++ G P+ S L+ + A QR +E++ +
Sbjct: 62 KVEAAIGGLPKAS-----GATVGSPSSSRQLIVSLN--TAAQRAQRMEDEY-------VS 107
Query: 132 LEQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L++ + D SR+++EAG ++ E+ + P + +S E +
Sbjct: 108 TEHLLVGLATDGGEASRILKEAGAGPDELLEAFERVRGTGRVTSENPEDTYQSLEKFGVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A KV DP+ R+ ++ VI+ L + K N V++GE VV G+
Sbjct: 168 LTERAREGKV-------DPVIGRDGEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVP++L + + L +S+ R E E+R++ + + ++ G+ V+ D
Sbjct: 221 QRIVAGDVPQSLLGKRLISLDLSAMVAGAKYRGEFEERLKAVLSEIKESEGQ--VITFID 278
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
A ++E M+ G ++ + ++G T Y P
Sbjct: 279 ELHTMVGAGAAEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRERIEKDP 327
Query: 367 SLE 369
+LE
Sbjct: 328 ALE 330
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E + L + + L +++ QKD V +++ V + R+G R G F
Sbjct: 556 VGRLMEGETSKLLRMEDELGRRLIGQKDAVAAVSDAVRRARAGISDPDRPTGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S +S + S
Sbjct: 610 ------LFLGPTGVGKTELAKALAEFLFDDERAIVRIDMSEYSEKHSVS-----RLVGAP 658
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G +V
Sbjct: 659 PGYVGYEEGGQLTEAVRRRPYTVVLLDEVEKAHLEVFDTLLQVLDDGRLTDGQGRQVDFR 718
Query: 773 DAIVILSC 780
+ I+IL+
Sbjct: 719 NTILILTS 726
>gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum DJO10A]
gi|239620927|ref|ZP_04663958.1| ClpB [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|322690037|ref|YP_004209771.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|239516188|gb|EEQ56055.1| ClpB [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|320461373|dbj|BAJ71993.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
Length = 894
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 6 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 63 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 108
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 109 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 168
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 169 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 221
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 222 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 279
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 280 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 328
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 329 IEKDPALE 336
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 564 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 617
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 618 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 664
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 665 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 724 DFKNTILIMTS 734
>gi|350545741|ref|ZP_08915197.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
gi|350526470|emb|CCD40355.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
Length = 865
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+H+ +LA G R L SH+ +Q +AL+
Sbjct: 6 LTTKFQEALSDAQSLAVGHDNQYIEPVHLLAALLAQQDGSAR--ALLSHAG-VQVQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T G+ Q +S L A + + Q L I
Sbjct: 63 ALNDAIDRLPQVQGTD---GNVQ---VSRELAGLLNTA---------DKEAQKLNDTYIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +I++ DD R+ ++ G + +++ + + S ++ + +
Sbjct: 108 SEMFLIAVADDRGEAGRIAKQHGLTRRALEAAINAVRGGAQVNSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPEMLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + E L + L ++V Q + + +AN + + R+G R G F
Sbjct: 554 VSRMMQREREKLLQIEGKLHERVIGQDEAIGAVANAIRRSRAGLSDPNRPYGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S ++ + I +S F + +
Sbjct: 608 ------LFLGPTGVGKTELCKALAAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVG 661
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L++++E+A + ++ GR+ G V +
Sbjct: 662 YEEGGYL---TEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNT 718
Query: 775 IVILSC 780
+++++
Sbjct: 719 VIVMTS 724
>gi|336264859|ref|XP_003347205.1| hypothetical protein SMAC_08097 [Sordaria macrospora k-hell]
gi|380087898|emb|CCC13976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 926
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 124/279 (44%), Gaps = 39/279 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTGLLRTAC 56
T A ++ AM LA + H+Q+ P+H+A ++L S+ L R
Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVSLLDPLPDPSKDQQNATPGTSSTLFRQVI 66
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
++H P + + +L RLP+ P + +++ + ++A Q+
Sbjct: 67 ERAHGDP---QLFDRALKKSLVRLPSQDPPP------EHVSMAPSFHTVLRKANELQK-- 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q+ +AV + LI ++ ++P+++ ++EA T++ ++ QA+ ++
Sbjct: 116 ---TQKDTYIAV----DHLITALAEEPAITNALKEANIPKTKLVTDAIQAIR---GTKRV 165
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E N + T T +++ +DP+ R E++ VI L + K N V++G
Sbjct: 166 DSRNADTEEENENLAKFTIDMTAMAR-EGKIDPVIGREEEIRRVIRILSRRTKNNPVLIG 224
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E VV G+ +I DVP+ L K L L + +
Sbjct: 225 EPGVGKTTVVEGLAQRIVNADVPDNLAACKLLSLDVGAL 263
>gi|340359012|ref|ZP_08681512.1| chaperone protein ClpB [Actinomyces sp. oral taxon 448 str. F0400]
gi|339885482|gb|EGQ75201.1| chaperone protein ClpB [Actinomyces sp. oral taxon 448 str. F0400]
Length = 905
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 41/347 (11%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ QV LH+ +L G+ + + + AL RLPAS+ G
Sbjct: 24 GNPQVDTLHLLAELLGQEDGVALGLLAAVNPDAGIRQTIGAATRRALTRLPASS-----G 78
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI----LDDPSVS 146
P S L+A + A + E I E L+I I + +
Sbjct: 79 SSVSQPQPSRGLLAGLEAASTEAKNLGDEY---------ISTEHLLIGIAAGNTSSDTAA 129
Query: 147 RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS 206
R++ E G ++T ++ + + + P + KS E L++ A + K
Sbjct: 130 RILSENGITATALRDALPKVRGNARVTSPNPEGTYKSLEKYGTDLTEAARSGK------- 182
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+ ++ VI+ L + K N V++GE VV G+ +I GDVPE+LRD +
Sbjct: 183 LDPVIGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRDKR 242
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
+ L ++ R E E+R++ + ++ G ++ + +L SE
Sbjct: 243 LIALDMAGMVAGAKYRGEFEERLKAVLKEIKDSDGE-VITFIDELHTVVGAGGGSEGA-- 299
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
M+ G ++ + L+G T Y P+LE
Sbjct: 300 ---------MDAGNMLKPMLARGELRLVGATTLDEYRENIEKDPALE 337
>gi|219848748|ref|YP_002463181.1| ATPase AAA-2 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219543007|gb|ACL24745.1| ATPase AAA-2 domain protein [Chloroflexus aggregans DSM 9485]
Length = 826
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 31/283 (10%)
Query: 32 HAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGG 91
H+Q+ H+ ML GL A + + P + +E L++LP ST + G
Sbjct: 26 HSQLDVEHLFLAMLRQRDGLASRALTRLNVDP---QEVERRIERELDKLPRMLSTHGISG 82
Query: 92 HCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISIL---DDPSVSRV 148
+ LV KRA+ R L + L+ L+I + D PS +R+
Sbjct: 83 QVYITPRTQRLV---KRAEEEANR---------LGDQYVGLDHLLIGLTGERDGPS-ARI 129
Query: 149 MREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLD 208
+ S Q+ V +EI + + S + S ES +L++ ++ + LD
Sbjct: 130 L-----QSYQIDQERMYQVLMEI--RGSQRSDDPSAESRYEILTKYSTDLTELARQDKLD 182
Query: 209 PI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCL 266
P+ R ++ VI L + K N V+VGE +V G+ +I +GDVP LRD K L
Sbjct: 183 PVIGREAEITRVIRILSRRTKNNPVLVGETGVGKTAIVEGLAQRIARGDVPPTLRDRKVL 242
Query: 267 PLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
L ++ + R E E+R++ + + VR+ GR I+L + +L
Sbjct: 243 ALDLAGMVAGSKFRGEFEERLKAVMDEVRNAKGR-IILFIDEL 284
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + L ++V Q + + +++ + + RSG R G F
Sbjct: 490 VSRMLETEREKLIHMEERLHERVIGQHEAIVALSDAIRRARSGLRDPRRPIGSF------ 543
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++A+ LA +F S + +S + R+ SR
Sbjct: 544 ------LFVGPTGVGKTELARALAEFMFDSEEAMTRVDMSEYQE---------RHTVSRL 588
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E+V P++V L +++E+A + ++ GR+ G
Sbjct: 589 IGAPPGYVGYDEGGQLTESVRRRPYQVILFDEIEKAHRDVFNALLQVLDDGRLTDGQGRT 648
Query: 769 VSLGDAIVILSC 780
V + I+I++
Sbjct: 649 VDFRNTIIIMTS 660
>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
Length = 866
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 129/297 (43%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + H Q+ P+H+ L G+ R ++ ++ AL
Sbjct: 6 LTTKFQQAFQDAQSLALGQDHQQMDPVHLLIAFLDQEGGIARPLLSKAG---VRVDALRN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
N L LP P G Q ++N L A K Q +RG I
Sbjct: 63 QLNRVLESLPKVQGHP---GEVQVGRDLTNMLNLADKMGQ---KRGD----------TYI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++++DD R+++EAG + ++ V E + ++ E +
Sbjct: 107 STEHFLLALMDDKGEAGRLLKEAGATIKDLEQAVHDLHGGEKINDVNAEEQRQALEKYTV 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
++ AS K LDP+ R++++ I+ L+ + K N V++GE +V G+
Sbjct: 167 DYTERASQGK-------LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
++ G+VPE+LRD + L L + + R E E+R++ + N + G+ I+
Sbjct: 220 ALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERLKSLLNDLEKSEGKIILF 276
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E E L + L+ +V Q + V ++N + + R+G R G F
Sbjct: 553 VSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPRRPNGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +F S ++ V + +S F + +
Sbjct: 607 ------LFLGPTGVGKTELSKALAEFLFDSEDHLVRVDMSEFMEKHSVARLIGAPPGYVG 660
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 661 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 717
Query: 775 IVILSCESFSSR 786
+++++ S R
Sbjct: 718 VIVMTSNLGSDR 729
>gi|23465812|ref|NP_696415.1| protease of ClpA/ClpB type [Bifidobacterium longum NCC2705]
gi|189440447|ref|YP_001955528.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|322691967|ref|YP_004221537.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|419850666|ref|ZP_14373646.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 35B]
gi|419851613|ref|ZP_14374539.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 2-2B]
gi|419855793|ref|ZP_14378541.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 44B]
gi|54035860|sp|Q8G4X4.1|CLPB_BIFLO RecName: Full=Chaperone protein ClpB
gi|23326506|gb|AAN25051.1| protease of ClpA/ClpB type [Bifidobacterium longum NCC2705]
gi|189428882|gb|ACD99030.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|320456823|dbj|BAJ67445.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|386408508|gb|EIJ23418.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 35B]
gi|386413330|gb|EIJ27943.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 2-2B]
gi|386414746|gb|EIJ29292.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 44B]
Length = 889
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|291516569|emb|CBK70185.1| ATP-dependent chaperone ClpB [Bifidobacterium longum subsp. longum
F8]
Length = 894
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 6 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 63 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 108
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 109 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 168
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 169 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 221
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 222 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 279
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 280 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 328
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 329 IEKDPALE 336
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 564 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 617
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 618 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 664
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 665 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 724 DFKNTILIMTS 734
>gi|209543912|ref|YP_002276141.1| ATP-dependent chaperone ClpB [Gluconacetobacter diazotrophicus PAl
5]
gi|209531589|gb|ACI51526.1| ATP-dependent chaperone ClpB [Gluconacetobacter diazotrophicus PAl
5]
Length = 867
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 35/299 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T + ++ A T+A R H Q+TP H+ +L A++ L+R A Q+
Sbjct: 6 FTERSRGFLQAAQTIAVRDYHQQLTPEHLLKALLDDPEGAASSLIRAAGGQA-------P 58
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A++ AL ++P + GG P + LV AQ ++ E Q L
Sbjct: 59 AVQAAVEAALAKVPR-----VQGGGAGQPQATPDLVRLLDAAQTAAQKAGDEYVAQDRLL 113
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
V I + D P+ R +R+ G ++ +++AV+ + V+S ++ S
Sbjct: 114 VAI-------AASDTPA-GRALRDGGATA----QALDKAVA--AIRKGRTVTSENAEASF 159
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ T++++ + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 160 DALKKYARDVTEIAQ-QGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVE 218
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEAL++ K L L + + R E E+R++ + + S G+ I+
Sbjct: 219 GLALRIVNGDVPEALKNKKLLSLDLGALVAGAKFRGEFEERLKAVLKEIESAEGQVILF 277
>gi|384200654|ref|YP_005586401.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
gi|338753661|gb|AEI96650.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 889
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIAAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|329114582|ref|ZP_08243341.1| Chaperone protein ClpB [Acetobacter pomorum DM001]
gi|326696062|gb|EGE47744.1| Chaperone protein ClpB [Acetobacter pomorum DM001]
Length = 890
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKALELCFNV 75
++ A T+A R + Q+TP H+ ML A++ L+R+A +P KA
Sbjct: 33 LQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAG----GNPEAVKA---ATEQ 85
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIELEQ 134
AL +LP + G P + LV A Q Q+ G Q LL
Sbjct: 86 ALAKLP-----KVQGSGAGQPAATPELVRILDNAEQTAQKAGDSFVAQDRLLVA------ 134
Query: 135 LIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQT 194
I+ D P+ R ++E G S+ +E+A++ I T S N E+N L +
Sbjct: 135 --IAASDTPA-GRALKENGASA----DTLEKAIT-TIRKGRTVTSENA--EANFDALKKY 184
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
A + LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 185 ARDVTEVALKGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIV 244
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPEAL++ K L L + + R E E+R++ + + S G+ I+
Sbjct: 245 NGDVPEALKNKKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILF 296
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L K V Q+ + ++N V + R+G R G F
Sbjct: 571 VDRMLEGERAKLLRMEDELRKSVVGQEQALKAVSNAVRRARAGLQDPNRPIGSF------ 624
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F + I +S F A +
Sbjct: 625 ------LFLGPTGVGKTELTKALARFLFDDDKALLRIDMSEFMEKHAVA-----RLIGAP 673
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 674 PGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFR 733
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 734 NTLIILTS 741
>gi|413962472|ref|ZP_11401699.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
gi|413928304|gb|EKS67592.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
Length = 865
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+H+ ++A G R+ L SH+ +Q +AL+
Sbjct: 6 LTTKFQEALSDAQSLAVGRDNQYIEPVHLLAALIAQQDGSARS--LLSHAG-VQVQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+NRLP T G+ Q +S L A + + Q L I
Sbjct: 63 ALNEAINRLPQVQGTD---GNVQ---VSRELAGLLNAA---------DKEAQKLNDTYIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +I++ DD R+ ++ G + +++ + + S ++ + +
Sbjct: 108 SEMFLIAVADDRGEAGRLAKQHGLTRRALEAAINAVRGGAQVNSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + + + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLHDIAKDEGQTIVF 276
>gi|258542820|ref|YP_003188253.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01]
gi|384042741|ref|YP_005481485.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-12]
gi|384051258|ref|YP_005478321.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-03]
gi|384054366|ref|YP_005487460.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-07]
gi|384057600|ref|YP_005490267.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-22]
gi|384060241|ref|YP_005499369.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-26]
gi|384063533|ref|YP_005484175.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-32]
gi|384119543|ref|YP_005502167.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421849531|ref|ZP_16282510.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
NBRC 101655]
gi|421852887|ref|ZP_16285570.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256633898|dbj|BAH99873.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01]
gi|256636957|dbj|BAI02926.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-03]
gi|256640010|dbj|BAI05972.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-07]
gi|256643066|dbj|BAI09021.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-22]
gi|256646121|dbj|BAI12069.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-26]
gi|256649174|dbj|BAI15115.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-32]
gi|256652161|dbj|BAI18095.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655218|dbj|BAI21145.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-12]
gi|371459718|dbj|GAB27713.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
NBRC 101655]
gi|371478886|dbj|GAB30773.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 871
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKALELCFNV 75
++ A T+A R + Q+TP H+ ML A++ L+R+A +P KA
Sbjct: 14 LQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAG----GNPEAVKA---ATEQ 66
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIELEQ 134
AL +LP + G P + LV A Q Q+ G Q LL
Sbjct: 67 ALAKLP-----KVQGSGAGQPAATPELVRILDNAEQTAQKAGDSFVAQDRLLVA------ 115
Query: 135 LIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQT 194
I+ D P+ R ++E G S+ +E+A++ I T S N E+N L +
Sbjct: 116 --IAASDTPA-GRALKENGASA----DTLEKAIT-TIRKGRTVTSENA--EANFDALKKY 165
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
A + LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 166 ARDVTEVALKGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIV 225
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPEAL++ K L L + + R E E+R++ + + S G+ I+
Sbjct: 226 NGDVPEALKNKKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILF 277
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L K V Q+ + ++N V + R+G R G F
Sbjct: 552 VDRMLEGERAKLLRMEDELRKSVVGQEQALKAVSNAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F + I +S F A +
Sbjct: 606 ------LFLGPTGVGKTELTKALARFLFDDDKALLRIDMSEFMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 715 NTLIILTS 722
>gi|296454972|ref|YP_003662116.1| ATPase domain-containing protein [Bifidobacterium longum subsp.
longum JDM301]
gi|296184404|gb|ADH01286.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 889
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|4587988|gb|AAD25929.1|AF085279_2 hypothetical protein [Arabidopsis thaliana]
Length = 798
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 49/279 (17%)
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS--LEICSQSTPVS 179
Q L VK+EL QLI+SILDDP VSRV EAGF S+++K ++ + V L SQ
Sbjct: 7 QNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPVPHLLRYSSQQPLFL 66
Query: 180 SN--KSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMY-VIENLMSKRK-RNFVVVGE 235
N + E N + T + N D+ Y I + +K K RN ++VG
Sbjct: 67 CNLTGNPEPNPVRWGFTVPSLNF-----------NGDLDYRRISAVFTKDKGRNPLLVG- 114
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--------------RVEV 281
S GV+ ++ +EK D LP + +N +
Sbjct: 115 --VSAYGVLTSYLNSLEKNQT-----DGMILPTKLHGLTAVNIGSEISDQISVKFDKTYT 167
Query: 282 EQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGI 341
+ R ++ L G G++L+ GDL R ++ + G + +I+ I +L+
Sbjct: 168 DTRFHDLGKLAEQGSGPGLLLHYGDL-----RVFTNGE--GNVPAANYIVNRISELLRRH 220
Query: 342 GENARFWLMGIATF-QSYMRCKSGHPSLETLWSLHPLTI 379
G R WL+G T + Y + P++E W L LTI
Sbjct: 221 GR--RVWLIGATTSNEVYEKMMRRFPNVEKDWDLQLLTI 257
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 572 LKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIA 631
LK+ L S S P S SS ++LN+E+ + L V Q D A
Sbjct: 394 LKKHLDSKDFSQPQSVSSYSF------DNPRDLNAESFKIIYRRLTDMVSGQ-----DEA 442
Query: 632 NTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSI 691
V+ C + + K S + + WL G D K +++ LA +V+ S + F+++
Sbjct: 443 ARVISC---ALSQPPK----SVTRRDVWLNLVGPDTVGKRRMSLVLAEIVYQSEHRFMAV 495
Query: 692 ALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKG 751
L + + +D R + + ++ E + NP V +E++E+AD Q
Sbjct: 496 DLGA-AEQGMGGCDDPMRLRGK-----TMVDHIFEVMCRNPFCVVFLENIEKADEKLQMS 549
Query: 752 FKRAIESGRIVTSSGDEVSLGDAIVILSCES 782
+AIE+G+ + S G EV +G+ I +++ S
Sbjct: 550 LSKAIETGKFMDSHGREVGIGNTIFVMTSSS 580
>gi|322709362|gb|EFZ00938.1| heat shock protein 101 [Metarhizium anisopliae ARSEF 23]
Length = 926
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 39/285 (13%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGL-------------- 51
T + T A V+ AM+LA + GH+Q+ P+H+A ++L L
Sbjct: 1 MTSRMDFTDRAQKAVEDAMSLAEQYGHSQLLPVHLAVSLLEPPVDLSKDQQNAPQNSIIT 60
Query: 52 -LRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
R ++H P + + L RLP+ P + +++ + A ++A
Sbjct: 61 LFRQVIEKAHGDP---QLFDRALKKTLVRLPSQDPPP------EQVSLAPSFHAVLRKAM 111
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
Q+ Q+ + V + LI ++ DDPS+ ++EA ++ + QA+
Sbjct: 112 ELQK-----VQKDSYIGV----DHLITALADDPSMQAPLKEASIPKPKLVQDAVQAIR-- 160
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKR 228
++ + +++ N + T T +++ + +DP+ R E++ V+ L + K
Sbjct: 161 -GTKRVDSKTADTEQENENLAKFTIDMTAMARDK-KIDPVIGREEEIRRVVRILSRRTKN 218
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
N V++GE VV G+ +I DVP+ L+ K L L + +
Sbjct: 219 NPVLIGEPGVGKTTVVEGLAQRIVNRDVPDNLKHCKLLSLDVGAL 263
>gi|285025947|dbj|BAI67908.1| ClpB protein [Acetobacter pasteurianus]
Length = 871
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKALELCFNV 75
++ A T+A R + Q+TP H+ ML A++ L+R+A +P KA
Sbjct: 14 LQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAG----GNPEAVKA---ATEQ 66
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIELEQ 134
AL +LP + G P + LV A Q Q+ G Q LL
Sbjct: 67 ALAKLP-----KVQGSGAGQPAATPELVRILDNAEQTAQKAGDSFVAQDRLLVA------ 115
Query: 135 LIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQT 194
I+ D P+ R ++E G S+ +E+A++ I T S N E+N L +
Sbjct: 116 --IAASDTPA-GRALKENGASA----DTLEKAIT-TIRKGRTVTSENA--EANFDALKKY 165
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
A + LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 166 ARDVTEVALKGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIV 225
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPEAL++ K L L + + R E E+R++ + + S G+ I+
Sbjct: 226 NGDVPEALKNKKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILF 277
>gi|347731266|ref|ZP_08864365.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. A2]
gi|347519973|gb|EGY27119.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. A2]
Length = 862
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 145/365 (39%), Gaps = 42/365 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + +A + A R GH QV H A ++ GL+ ++ P A
Sbjct: 6 FTEKSQQAIAEAQSTAVRFGHQQVDVEHAALALVRQEQGLVPRLLERAGYKP---DAFAA 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L + PA + G ++ L A RAQ RR E +
Sbjct: 63 ALEATLQKRPAVSGPGAAQGQI---YVTQRLNQALVRAQDFARRLKDEY---------VS 110
Query: 132 LEQLIISILDDP---SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E LI + L++P + +V RE G + ++ + +E + + P + ++ +
Sbjct: 111 VEHLICAFLEEPPATDMGKVAREFGLTQDKLLAVLEDVRGAQRVTSQNPEDTYEALQKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A K LDP+ R+ ++ V+ L + K N V++GE +V G
Sbjct: 171 RDLVEEARKGK-------LDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I KGDVPE L++ L + + R E E+R++ + V GR IV+ +
Sbjct: 224 LAHRILKGDVPEGLKNRSLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGR-IVMFI 282
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A S+ M+ G L+ + +G T Y +
Sbjct: 283 DELHTI-VGAGKSDGA-----------MDAGNLLKPMLARGELHCIGATTLDEYRKYIEK 330
Query: 365 HPSLE 369
P+LE
Sbjct: 331 DPALE 335
>gi|397661093|ref|YP_006501793.1| Type VI secretion ClpV1 ATPase [Taylorella equigenitalis ATCC
35865]
gi|394349272|gb|AFN35186.1| Type VI secretion ClpV1 ATPase [Taylorella equigenitalis ATCC
35865]
Length = 941
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 133/642 (20%), Positives = 231/642 (35%), Gaps = 110/642 (17%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+E++ +++ LM +R+ N ++ GE VV G ++ KGDVPE LRDV
Sbjct: 203 IDPVSGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFALRLAKGDVPETLRDVT 262
Query: 265 CLPLSISSFRHMNRV--EVEQR----VEEIK----------------------------- 289
L I + + E E R ++E++
Sbjct: 263 LYLLDIGLLQAGASMKGEFESRLRSVIDEVQSSEKPIVLFIDEIHTLVGAGGAQGTGDAA 322
Query: 290 NLVRSCLGRGIVLNLGDLEWAEFRASSSEQ---VRGYYCSIEHIIMEIGKLVCGIGENAR 346
NL++ L RG + +G WAE++ + R + H E E A
Sbjct: 323 NLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPNE---------EKAL 373
Query: 347 FWLMGIA-TFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLIT-TDSDLQSQSTSKKA 404
L GI+ +++ + ++E L IPA L I D+ + S+ A
Sbjct: 374 IMLRGISEPLENHHKVLLLDEAIEAAVRLSHRYIPARQLPDKAIALLDTACARVAVSQYA 433
Query: 405 ESG--------VSWLLFEGEEENKQLTCCADCSAKF---EAEARSLQSSSCNSDSPTSSL 453
E + +L E E ++ D S + E E +L+ D+ S
Sbjct: 434 EPAALEDTRRTIEYLNTEREIALREQKLGHDKSERLEEIEKELDTLEERQKELDAKWSEE 493
Query: 454 PAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSST 513
+++ +K N D KK SI + K P + + ++ P+ +T
Sbjct: 494 KELIKKIFELRKIIQENTDLSR------KKSKSIPTELAKNPELQADSSSEEASQPTEAT 547
Query: 514 SGFSYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLK 573
A EPK+ E K SE L E +D++
Sbjct: 548 Q------------------AEEEPKEHVSED---LKEAPKSKKLSEKELDEVRKELRDVQ 586
Query: 574 QPLSSNRNSTPNSTSSSDIMEMEY---------VHKFKELNSENLTSLCNALEKKVPWQK 624
Q L + P S D + V + + + ++ +L + LEK+V Q+
Sbjct: 587 QKLLEKQGEYPLIFPSVDGNAVASVVADWTGIPVGRMVKNEANSILTLADTLEKRVIGQR 646
Query: 625 DTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGS 684
+ I + R+ K D + K G K + A LA ++G
Sbjct: 647 HGLETIVKRIQTSRA-------KLTDPN--KPVGVFLLTGPSGVGKTETALALAESLYGG 697
Query: 685 HNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQA 744
N ++I +S F ST + EAV P+ V L+++VE+A
Sbjct: 698 EQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVL---TEAVRRRPYSVVLLDEVEKA 754
Query: 745 DYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSR 786
+ F + + G + G + + ++IL+ + R
Sbjct: 755 HPDVHEIFFQVFDKGFMEDGEGRYIDFKNTVIILTSNVGTDR 796
>gi|312133769|ref|YP_004001108.1| clpa2 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773050|gb|ADQ02538.1| ClpA2 [Bifidobacterium longum subsp. longum BBMN68]
Length = 889
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|315498625|ref|YP_004087429.1| ATP-dependent chaperone clpb [Asticcacaulis excentricus CB 48]
gi|315416637|gb|ADU13278.1| ATP-dependent chaperone ClpB [Asticcacaulis excentricus CB 48]
Length = 859
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 30/293 (10%)
Query: 19 VVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALN 78
+++ A +A+ R H TPLH+ + + R ++ P +A + LN
Sbjct: 13 LIQSAQAIAQSRNHQYFTPLHLLKALSEDRESVARPLIERAGGRP---EAFVGAVDATLN 69
Query: 79 RLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIIS 138
+LP+ T GG Q + N AF A EN + ++L+++
Sbjct: 70 KLPSVT-----GGTQQL-YMHNDTAKAFTDA---------ENDANKAGDAFVTADRLLVA 114
Query: 139 ILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
L++ + +++ AG S +K ++ + P +S+ + E+ L++ A
Sbjct: 115 ALNNSDGAALLKAAGTSLGALKDAQKE------FRKGKPANSSNA-EAGFDALNKYARDL 167
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
+ +DP+ R+E++ I+ L + K N V++GE +V G+ +I GDV
Sbjct: 168 TQAALDGKIDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDV 227
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
PE+L+D K L L + + R E E+R++ + N V G+ IVL + ++
Sbjct: 228 PESLKDKKLLSLDMGALIAGAKYRGEFEERLKSVLNEVTQAEGQ-IVLFIDEM 279
>gi|134295878|ref|YP_001119613.1| ATPase [Burkholderia vietnamiensis G4]
gi|134139035|gb|ABO54778.1| ATPase AAA-2 domain protein [Burkholderia vietnamiensis G4]
Length = 865
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAIARLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLNDIAKDEGQTIVF 276
>gi|345856613|ref|ZP_08809088.1| ATP-dependent chaperone ClpB [Desulfosporosinus sp. OT]
gi|344330288|gb|EGW41591.1| ATP-dependent chaperone ClpB [Desulfosporosinus sp. OT]
Length = 865
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + + + A R G++QV P H+ ++L G++ + + + AL
Sbjct: 8 FTQKSQEAITDSQSKAERNGNSQVEPEHLLLSLLEQGDGVVPQVLTKLN---MAVGALIQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+NR P + GG+ Q TIS+ L + AH G+ ++ +
Sbjct: 65 SIRQEINRFPRIS-----GGNVQL-TISSRLRSVL--VAAHDEMGTFGDEY-------VS 109
Query: 132 LEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L+++IL V +++++AG + ++ + + + + P + + E L
Sbjct: 110 TEHLLLAILGKAGGPVEQILKQAGLTREKLLQALREVRGTQRVTSQNPEGTYAALEQYGL 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + A R LDP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 170 NLVEQAR-------RGRLDPVIGRDEEIRRVIQTLSRRTKNNPVLIGEPGVGKTAIVEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVP+A+++ + + L + +
Sbjct: 223 AQRIVRGDVPDAIKNKQVVALDMGTL 248
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + + ++V Q++ V +A+ V + R+G R G F
Sbjct: 551 VAKLMESEMEKLVHMEDRIHERVIGQEEAVNAVADAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F V I +S + +
Sbjct: 605 ------LFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVA-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V P+ V L +++E+A + ++ GR+ G V+
Sbjct: 654 PGYVGYEEGGQLTEVVRRKPYSVILFDEIEKAHSDVTNVLLQLLDDGRLTDGQGRIVNFK 713
Query: 773 DAIVILSC 780
+ +VIL+
Sbjct: 714 NTVVILTS 721
>gi|326773038|ref|ZP_08232322.1| ATP-dependent chaperone protein ClpB [Actinomyces viscosus C505]
gi|326637670|gb|EGE38572.1| ATP-dependent chaperone protein ClpB [Actinomyces viscosus C505]
Length = 893
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 151/371 (40%), Gaps = 51/371 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T ++ + AM A G+ Q+ P H+ +L + GLL C + + +A
Sbjct: 6 TTKSQEAISGAMQAAAAAGNPQIEPAHLLVELLSQPDGVAAGLLAAVCPDAAAR----QA 61
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ L +LPAS+ + M P S +L+AA + A + S E
Sbjct: 62 VGASARRILTQLPASSGSSM-----TQPQPSRSLLAALEAASTVAKELSDEY-------- 108
Query: 129 KIELEQLIISILDD------PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
I E L+I + P+V+R++ +AG + + + Q + + P + K
Sbjct: 109 -ISTEHLLIGLAKGDTSGSAPTVARILADAGATPEALIEALPQVRGSSRVTSANPEGTYK 167
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ E L++ A + LDP+ R+ ++ V++ L + K N V++GE
Sbjct: 168 TLEKYGTDLTEAAREGR-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGK 220
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
VV G+ +I GDVPE+LR + + L +S R E E+R++ + ++ G
Sbjct: 221 TAVVEGLAQRIVAGDVPESLRGKRLISLDLSGMVAGAKYRGEFEERLKAVLKEIKDSDGE 280
Query: 299 GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY 358
++ + +L SE M+ G ++ + ++G T Y
Sbjct: 281 -VITFIDELHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEY 328
Query: 359 MRCKSGHPSLE 369
P+LE
Sbjct: 329 RENIEKDPALE 339
>gi|397571754|gb|EJK47942.1| chaperone CLPB [Thalassiosira oceanica]
Length = 924
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 31/300 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH-----SHPLQC 66
+T +++A+ +AR GH+Q P+H+A+ + A G+ +S S +
Sbjct: 7 MTDATTKALQEALVIARDNGHSQAEPIHLASALFAEDDGIGSRVVARSDAGCGPSSIIDV 66
Query: 67 KALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
+ + + A+ PA P ++S++L +RA A + + L+
Sbjct: 67 RLVRQGLSRAMLTRPAQNPPP------HEASMSSSLQKVIQRAMALAK-----SNADSLV 115
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A L+ L+++I DD S V+ AG + V+ V+ + ++ + ++ E
Sbjct: 116 A----LDHLLVAIYDDRSTKDVLESAGLTKKVVEKTVQSIRGKRKITSTSAEETFEALEK 171
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L + A K LDP+ R++++ VI+ L + K N +VGE +V
Sbjct: 172 YGIDLVKEAEDGK-------LDPVIGRDDEIRRVIQILCRRTKNNPCLVGEPGVGKTAIV 224
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP L+ V L + + R E E+R+ + + V+ G I+
Sbjct: 225 EGLARRILDGDVPVTLQGVSLRTLDMGALVAGAKYRGEFEERLRAVLDEVKQAEGNIILF 284
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 39/195 (20%)
Query: 599 HKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEET 658
+K + E + L + L+++V Q++ V + +++++ ++G R + ++
Sbjct: 571 NKLTQTERERILKLGDRLKERVVGQEEAVGAVVDSIMRSKAGLARAS---------QPDS 621
Query: 659 WLFFQGVDADAKEKIAKEL-ARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK L + L G + V I +S ++ +E S
Sbjct: 622 SFLFLGPTGTGKTELAKALFSELYDGDERSLVRIDMSEYT----------------EEHS 665
Query: 718 CS--------YIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
S YI + EAV P+ V L ++VE+A + ++ GR+ S
Sbjct: 666 VSRLIGSPPGYIGHEEGGQLTEAVRRKPYTVVLFDEVEKAHKKILTVLLQVLDEGRLTDS 725
Query: 765 SGDEVSLGDAIVILS 779
G V + ++IL+
Sbjct: 726 RGRTVDFTNTVIILT 740
>gi|78066617|ref|YP_369386.1| ATPase AAA [Burkholderia sp. 383]
gi|77967362|gb|ABB08742.1| AAA ATPase, ClpB [Burkholderia sp. 383]
Length = 865
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---IQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---IGRELSGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGDAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|333988986|ref|YP_004521600.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium sp.
JDM601]
gi|333484954|gb|AEF34346.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium sp.
JDM601]
Length = 848
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 153/796 (19%), Positives = 285/796 (35%), Gaps = 146/796 (18%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ ++ P H+ +L + G+ +P + L+RLP ++
Sbjct: 25 GNPEIRPAHLLQALLTQNDGIAVPLLEAVGVNPATIRTENQHL---LDRLPQAS------ 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSRVM 149
G P +S +AA AQ Q ++++ + E L++ + D V++V+
Sbjct: 76 GASAQPQLSRESLAAITVAQ--QLATELDDEY-------VSTEHLMVGLATGDSDVAKVL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
G S ++ + + P +S ++ E L+ A K LDP
Sbjct: 127 TGHGASPQALRDGFVKVRGSARVTNPDPEASYQALEKYSTDLTARAREGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD +
Sbjct: 180 VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVVS 239
Query: 268 LSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L + S R E E+R++ + + +++ G+ ++ + +L ++ E
Sbjct: 240 LDLGSMVAGAKYRGEFEERLKAVLDEIKNAAGQ-VITFIDELHTIVGAGATGEGA----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSLETL 371
M+ G ++ + L+G T + Y + G PS E
Sbjct: 294 ------MDAGNMIKPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVYVGEPSAEDT 347
Query: 372 WSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLFEGE 416
+ H + I +L + +D + ++ KA + S L E +
Sbjct: 348 IGILRGLKERYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEID 407
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCNSDSP-TSSLPAWLQQYKNEKKATLSNNDKDS 475
++ + E E +L ++ + L A L YK EK A
Sbjct: 408 SRPVEIDEVERLVRRLEIEEMALSKEEDDASADRLEKLRAELADYK-EKLA--------- 457
Query: 476 GVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHRDW 532
+L +W++ N+I E+ T S + G + + +Y + +
Sbjct: 458 ---ELTARWHNEKNAIDVVRELKEQLETLRGESDRAERDGDLAKAAELRYGRIPEVEKKL 514
Query: 533 AVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI 592
PK RE L D S IP + L+ ++ +
Sbjct: 515 EAALPKAEAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETAKL 561
Query: 593 MEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFK 649
+ ME + L K+V Q+ V +++ V + R+G R G F
Sbjct: 562 LRME-----------------DELAKRVVGQRKPVQAVSDAVRRSRAGVADPNRPTGSF- 603
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
F G K ++AK LA +F V I +S + + +
Sbjct: 604 -----------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHSVARLVG-- 650
Query: 710 KRSRDEQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
YI + EAV P+ V L ++VE+A + ++ GR+
Sbjct: 651 ------APPGYIGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDG 704
Query: 765 SGDEVSLGDAIVILSC 780
G V + I+IL+
Sbjct: 705 QGRTVDFRNTILILTS 720
>gi|149921121|ref|ZP_01909579.1| ATP-dependent chaperone protein ClpB [Plesiocystis pacifica SIR-1]
gi|149818008|gb|EDM77467.1| ATP-dependent chaperone protein ClpB [Plesiocystis pacifica SIR-1]
Length = 906
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 43/303 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +AR GH +VT LH+ +L GL R ++ H A E AL +
Sbjct: 17 LAHAQAMARELGHPEVTTLHLTQALLQQEGGLARPLLERAGVH---GAAAERAIRDALAK 73
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
P + GG S L A RA G E Q L+ E L++++
Sbjct: 74 RP-----QVAGGQL---GASRELAATLDRAA-----GEAEALQDKFLST----EHLLLAM 116
Query: 140 LDDPS-----------VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
L +P ++V+ E G S +++ +++ + + P S+ ++ +
Sbjct: 117 LPEPKKGFGGRSEFALATKVLVELGASRELLRAALDEMRGSQRVTTQDPESTYEALDKYT 176
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+ A + K LDP+ R+ ++ I+ L + K N V++G+ + G
Sbjct: 177 RDLTALARSQK-------LDPVIGRDAEIRRAIQVLSRRTKNNPVLIGDPGVGKTALAEG 229
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I GDVPE+LRD + L L +++ R E E+R++ + + + S G+ I+L +
Sbjct: 230 IGLRIAAGDVPESLRDRRLLQLDLAALVAGAKYRGEFEERLKAVLDEIASADGK-ILLFI 288
Query: 305 GDL 307
+L
Sbjct: 289 DEL 291
>gi|392426238|ref|YP_006467232.1| ATP-dependent chaperone ClpB [Desulfosporosinus acidiphilus SJ4]
gi|391356201|gb|AFM41900.1| ATP-dependent chaperone ClpB [Desulfosporosinus acidiphilus SJ4]
Length = 862
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + QA + R G++QV P H+ ++L G++ L AL
Sbjct: 8 FTQKSQEAIAQAQAVTERNGNSQVEPEHLLLSLLEQGDGVVPQVL---SKLDLAVGALIQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NR P + GG+ Q P + LVAA H + ++
Sbjct: 65 SLRQEINRFPRIS-----GGNLQITISPRLRTVLVAA------HDEMSTFGDEY------ 107
Query: 129 KIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E ++++I + + +++++AG S + + + + + + P + + E
Sbjct: 108 -VSTEHMLLAIFEKAGGAAEKILKQAGLSRESLLQALREVRGTQRVTSANPEGTYAALEQ 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L L + A R LDP+ R+E + VI+ L + K N V++GE +V
Sbjct: 167 YGLNLVEQAK-------RGRLDPVIGRDEVIRRVIQTLSRRTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I +GDVP A++D + + L + S
Sbjct: 220 EGLAQRIVRGDVPTAIKDKQVIALDLGSM 248
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + ++V Q + V +A+ V + R+G R G F
Sbjct: 551 VSKLMESEMEKLVQMEERIHQRVIGQDEAVRAVADAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF--SSTRADSTEDSRNKRS 712
F G K ++A+ LA +F V I +S + T A
Sbjct: 605 ------LFLGPTGVGKTELARALAEFLFDDDQALVRIDMSEYMEKHTVARLIGAPPGYVG 658
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
+E + EAV P+ V L ++ E+A + ++ GR+ G V+
Sbjct: 659 YEEGG-----QLTEAVRRKPYSVILFDETEKAHSDVTNVLLQLLDDGRLTDGQGRIVNFK 713
Query: 773 DAIVILSC 780
+ +VIL+
Sbjct: 714 NTVVILTS 721
>gi|118588511|ref|ZP_01545920.1| endopeptidase Clp ATP-binding chain B, clpB [Stappia aggregata IAM
12614]
gi|118439217|gb|EAV45849.1| endopeptidase Clp ATP-binding chain B, clpB [Stappia aggregata IAM
12614]
Length = 865
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 31/296 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A T A RGH Q P H+ +L G+ ++ + KAL+
Sbjct: 7 TERARGFVQSAQTFALGRGHQQFAPEHILKVLLDDQEGMASGLIDRAGGN---AKALKGD 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
L+++P + GG Q + A F++A+ A + S ++ LLA+ +
Sbjct: 64 LEGLLDKMPKVS-----GGSGQL-YMGQATARLFEQAEKIADKAGDSFVTVERLLLALAM 117
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ D ++M+ G + + + Q +T + + +
Sbjct: 118 DT---------DGETGKLMKRHGITPNALNEAINQLRQGRTADTATAENQYDALKKFARD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 169 LTQVAREGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D + L L + S R E E+R++ + + V++ G+ I+
Sbjct: 222 LRIVNGDVPESLKDKQLLALDMGSLIAGAKYRGEFEERLKGVLSEVQAAAGKVILF 277
>gi|387902393|ref|YP_006332732.1| ClpB protein [Burkholderia sp. KJ006]
gi|387577285|gb|AFJ86001.1| ClpB protein [Burkholderia sp. KJ006]
Length = 865
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLP T T GG Q I L +A + + Q L I
Sbjct: 63 ALNEAIARLPQVTGT---GGDIQ---IGRELAGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + +++ + S ++ + +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARKHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKSVLNDIAKDEGQTIVF 276
>gi|171317872|ref|ZP_02907049.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
gi|171096941|gb|EDT41811.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
Length = 865
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQHDGSARSLMSRAGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DREAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSL-----EICSQSTPVSSNKSKE 185
E ++++ DD ++ R+ G + + ++E A++ ++ SQ S ++ +
Sbjct: 108 SEMFLLAVSDDKGEAGKLARQHGLT----RKSLEAAIAAVRGGSQVHSQDAE-SQREALK 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 216 VEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIV 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|325090251|gb|EGC43561.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 925
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 47/303 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L A+S L
Sbjct: 6 LTDRANKALVDAHALAEQHAHPQLLPIHLAVSLLDPPADESKDQQVTTHPSHQASSASLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH 112
+ ++H P + L N +L RLP+ P P IS L +A ++
Sbjct: 66 KRVVEKAHGDP---QLLARALNRSLVRLPSQDPPPETIAPS--PAISKVLRSATNLSK-- 118
Query: 113 QRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEI 171
Q+ +A+ + LI ++ +DP++ R + +A + + + S ++Q ++
Sbjct: 119 -------TQKDSYVAI----DHLIAALAEDPAIQRALADANIPNVKLIDSAIQQIRGMKR 167
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
T + +S+ + T+ A + +DP+ R E++ VI L + K N
Sbjct: 168 VDSKTADTEEESENLKKFTIDMTSMAREGK-----IDPVIGREEEIRRVIRILSRRTKNN 222
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEE 287
V++GE VV G+ +I DVP L + K L L + S + R E E+R++
Sbjct: 223 PVLIGEPGVGKTTVVEGLARRIVNADVPANLSNCKLLSLDVGSLVAGSKYRGEFEERMKG 282
Query: 288 IKN 290
+ N
Sbjct: 283 VLN 285
>gi|57239368|ref|YP_180504.1| ClpA-type chaperone [Ehrlichia ruminantium str. Welgevonden]
gi|57161447|emb|CAH58372.1| heat shock protein ClpB [Ehrlichia ruminantium str. Welgevonden]
Length = 859
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 45/301 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAAS---TGLLRTACLQSHSHPLQCKALELCFNV- 75
+ QA T A GH + P H+ ML +L T+C C L +V
Sbjct: 14 IVQAQTSAVALGHQSLVPEHLLKVMLDDKDEIVEVLLTSC--------GCNVETLRNDVI 65
Query: 76 -ALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELE 133
ALN+LP S P GH ++ L A A+ HQ + +E
Sbjct: 66 SALNKLPV-VSGPG-SGHIHLSKEMAQVLQEAVNLAKRHQDS-------------YVTVE 110
Query: 134 QLI--ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+L+ ++I+ D +VSR++ G + +++S + V++ +++ V+S E L
Sbjct: 111 RLLQALTIIKDSNVSRILIAHGVTPQKLESLI---VNMRNGARADSVNS----EQKFNAL 163
Query: 192 SQTA-SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
+ A T+V++ LDP+ R+E++ I+ L+ + K N V++GE ++ G+
Sbjct: 164 KKYAKDVTEVARAG-KLDPVIGRDEEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIIEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
KI KGDVP LRD++ + L + R E E+R++ + N + S G I+L + +
Sbjct: 223 HKIVKGDVPIGLRDMRIMSLDLGMLVAGTKYRGEFEERLKAVVNEIVSSNG-SIILFIDE 281
Query: 307 L 307
L
Sbjct: 282 L 282
>gi|225560240|gb|EEH08522.1| heat shock protein CLPA [Ajellomyces capsulatus G186AR]
Length = 925
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 47/303 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L A+S L
Sbjct: 6 LTDRANKALVDAHALAEQHAHPQLLPIHLAVSLLDPPADESKDQQVTTHPSHQASSASLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH 112
+ ++H P + L N +L RLP+ P P IS L +A ++
Sbjct: 66 KRVVEKAHGDP---QLLARALNRSLVRLPSQDPPPETIAPS--PAISKVLRSATNLSK-- 118
Query: 113 QRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEI 171
Q+ +A+ + LI ++ +DP++ R + +A + + + S ++Q ++
Sbjct: 119 -------TQKDSYVAI----DHLIAALAEDPAIQRALADANIPNVKLIDSAIQQIRGMKR 167
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
T + +S+ + T+ A + +DP+ R E++ VI L + K N
Sbjct: 168 VDSKTADTEEESENLKKFTIDMTSMAREGK-----IDPVIGREEEIRRVIRILSRRTKNN 222
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEE 287
V++GE VV G+ +I DVP L + K L L + S + R E E+R++
Sbjct: 223 PVLIGEPGVGKTTVVEGLARRIVNADVPANLSNCKLLSLDVGSLVAGSKYRGEFEERMKG 282
Query: 288 IKN 290
+ N
Sbjct: 283 VLN 285
>gi|190347151|gb|EDK39372.2| hypothetical protein PGUG_03470 [Meyerozyma guilliermondii ATCC
6260]
Length = 900
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 33/286 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA----STGLLRTACLQSHSHPLQCK 67
T A +++ A +A+ HAQ+ PLH+ M+ + ST L+T ++ +
Sbjct: 6 FTDNALNIITNATQIAKEGSHAQLMPLHLLAAMVPSDNESSTPYLKTLITKAR---YEWP 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N + RLP+ P + ++ Q Q+ + QQ+
Sbjct: 63 DFERIVNRRVVRLPSQNPPP------------DTPAPSYATGQVLQKAAKFKTQQKDNY- 109
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I + +++++L+D S+ + +EAG ++ + S V + + + S + S
Sbjct: 110 --IAQDHILLALLEDASIKEIFKEAGINTETISSEVME------MRKGQRIDSRTADSSQ 161
Query: 188 VLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
K R +DP+ R E++ VI L + K N V++GE +V
Sbjct: 162 TFEFLSKYCEDLTEKAREGRIDPVIGREEEIRRVIRVLARRTKSNSVLIGEAGVGKTSIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI 288
GV +I GDVP L + L + + + E E+R++ +
Sbjct: 222 EGVAQRIVDGDVPNVLSQARLFALDLGALTAGAKYKGEFEERIKGV 267
>gi|414170239|ref|ZP_11425853.1| chaperone ClpB [Afipia clevelandensis ATCC 49720]
gi|410884911|gb|EKS32731.1| chaperone ClpB [Afipia clevelandensis ATCC 49720]
Length = 877
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A TLA R GH Q TPLH+ +L S GL +S + +A+ ALN+
Sbjct: 14 IQSAQTLAMREGHQQFTPLHILKVLLDDSEGLAGGLIDRSGGN---SRAILKATEDALNK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG----SIENQQQPLLAVKIELEQL 135
+P S G P + A AA QA ++ G ++E Q L A
Sbjct: 71 MP-KVSGAGAGQVYLAPATARAFDAA---EQAAEKAGDSFVTVERLLQALAA-------- 118
Query: 136 IISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
D S + + G + Q N+ A++ + + + S E+ L + A
Sbjct: 119 -----DKESDAGALLAKGGVTPQ---NLNAAIN---ALRKGRTADSASAENAYDALKKYA 167
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
+ LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 168 RDLTEAAHDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIIN 227
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE+L+D K L L + + R E E+R++ + + V S G+ I+
Sbjct: 228 GDVPESLKDKKVLSLDMGALIAGAKYRGEFEERLKAVLSEVTSSDGQIILF 278
>gi|420153501|ref|ZP_14660462.1| putative ATP-dependent chaperone protein ClpB [Actinomyces
massiliensis F0489]
gi|394759494|gb|EJF42241.1| putative ATP-dependent chaperone protein ClpB [Actinomyces
massiliensis F0489]
Length = 904
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 150/369 (40%), Gaps = 49/369 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA----ASTGLLRTACLQSHSHPLQCKA 68
T + + AM A G+ Q+ LH+ +L + GLL A + + LQ
Sbjct: 6 TTRSQEAISGAMQAAAAAGNPQIDTLHLLAELLGQEDGVAVGLL--AAVNPDAGALQT-- 61
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ AL +LPAS+ G P S L+AA + A +R E
Sbjct: 62 IGAATRRALTQLPASS-----GSSVSQPQPSRGLLAALEAASNEAKRLGDEY-------- 108
Query: 129 KIELEQLIISIL-DDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
I E L+I I +PS +R++ + G ++ ++ + + + P + KS
Sbjct: 109 -ISTEHLLIGIAAGNPSSDAAARILADNGATAEALRDALPKVRGGARVTSPNPEGTYKSL 167
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E L++ A A + LDP+ R+ ++ V++ L + K N V++GE
Sbjct: 168 EKYGTDLTEAARAGQ-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTA 220
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
VV G+ +I GDVPE+LR + + L ++ R E E+R++ + ++ G +
Sbjct: 221 VVEGLAQRIVAGDVPESLRGKRLIALDLAGMVAGAKYRGEFEERLKAVLKEIKDSDGE-V 279
Query: 301 VLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR 360
+ + +L SE M+ G ++ + L+G T Y
Sbjct: 280 ITFIDELHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRLVGATTLDEYRE 328
Query: 361 CKSGHPSLE 369
P+LE
Sbjct: 329 NIEKDPALE 337
>gi|170743190|ref|YP_001771845.1| ATP-dependent chaperone ClpB [Methylobacterium sp. 4-46]
gi|168197464|gb|ACA19411.1| ATP-dependent chaperone ClpB [Methylobacterium sp. 4-46]
Length = 878
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 40/305 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A LA R GH Q++P HV +L GL+ A QS Q +A
Sbjct: 7 TERARGFVQAAQNLALREGHPQLSPGHVLKVLLDDPEGLCAGLIERAGGQSRVALAQTEA 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLL 126
P + G P + L+ F A+ A ++ G S ++ LL
Sbjct: 67 W-------------LAKQPKVSGGASQPQATRDLMRLFDTAEKAAEKAGDSYVTVERLLL 113
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A+ +E D R + AG ++ + + + + + N + E+
Sbjct: 114 ALAVE---------KDSEAGRALAAAGVTAQSLNAAIN-------ALRKGRTADNPTAEN 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 AYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+LRD + L L + + R E E+R++ + + V + G GI+L
Sbjct: 218 EGLALRIINGDVPESLRDKQLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEG-GIIL 276
Query: 303 NLGDL 307
+ ++
Sbjct: 277 FIDEM 281
>gi|238027045|ref|YP_002911276.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
gi|237876239|gb|ACR28572.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
glumae BGR1]
Length = 865
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+HV ++ G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAAGHDNQYIEPVHVLAALIGQQDGSARSLMSRTGVH---VQALQG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A++RLP T T GG Q + L +A + + Q L I
Sbjct: 63 ALNEAISRLPQVTGT---GGDIQ---VGRELAGLLNQA---------DKEAQKLNDSFIA 107
Query: 132 LEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD ++ R+ G + ++S + + S ++ + +
Sbjct: 108 SEMFLLAVADDRGDAGKLARQHGLTRKSLESAIAAVRGGSQVHSADAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARSGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR IV
Sbjct: 221 QRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGRTIVF 276
>gi|58617389|ref|YP_196588.1| ClpB protein [Ehrlichia ruminantium str. Gardel]
gi|58417001|emb|CAI28114.1| ClpB protein [Ehrlichia ruminantium str. Gardel]
Length = 863
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 45/301 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAAS---TGLLRTACLQSHSHPLQCKALELCFNV- 75
+ QA T A GH + P H+ ML +L T+C C L +V
Sbjct: 18 IVQAQTSAVALGHQSLVPEHLLKVMLDDKDEIVEVLLTSC--------GCDVETLRNDVV 69
Query: 76 -ALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELE 133
ALN+LP S P GH ++ L A A+ HQ + +E
Sbjct: 70 SALNKLPV-VSGPG-SGHIHLSKEMAQVLQEAVNLAKRHQDS-------------YVTVE 114
Query: 134 QLI--ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+L+ ++I+ D +VSR++ G + +++S + V++ +++ V+S E L
Sbjct: 115 RLLQALTIIKDSNVSRILIAHGVTPQKLESLI---VNMRNGAKADSVNS----EQRFNAL 167
Query: 192 SQTA-SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
+ A T+V++ LDP+ R+E++ I+ L+ + K N V++GE ++ G+
Sbjct: 168 KKYAKDVTEVARAG-KLDPVIGRDEEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIIEGLA 226
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
KI KGDVP LRD++ + L + R E E+R++ + N + S G I+L + +
Sbjct: 227 HKIVKGDVPIGLRDMRIMSLDLGMLVAGTKYRGEFEERLKAVVNEIVSSNG-SIILFIDE 285
Query: 307 L 307
L
Sbjct: 286 L 286
>gi|227546979|ref|ZP_03977028.1| endopeptidase Clp [Bifidobacterium longum subsp. longum ATCC 55813]
gi|227212511|gb|EEI80400.1| endopeptidase Clp [Bifidobacterium longum subsp. infantis ATCC
55813]
Length = 894
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G+ R+ + P +
Sbjct: 6 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---Q 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 63 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 108
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 109 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 168
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++G+ V
Sbjct: 169 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGDPGVGKTAV 221
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 222 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 279
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 280 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 328
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 329 IEKDPALE 336
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 564 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 617
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 618 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 664
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 665 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 724 DFKNTILIMTS 734
>gi|340516387|gb|EGR46636.1| predicted protein [Trichoderma reesei QM6a]
Length = 923
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTG 50
T + T A ++ AM++A + GH+Q+ P+H+A +L +
Sbjct: 1 MTSRMDFTDRAQKAIEDAMSMAEQYGHSQLLPVHLAVALLEPPIDQSKDQQNGPQQTTVT 60
Query: 51 LLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
L R A ++H P + ++ L RLP+ P + ++S + A ++AQ
Sbjct: 61 LFRQAIERAHGDP---QLVDRALKKNLVRLPSQDPPP------EQVSLSPSFHAVLRKAQ 111
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
QR Q+ +A+ + LI ++ +D + V++E ++ QA
Sbjct: 112 ELQR-----VQKDTYIAI----DHLITALAEDAGIQAVLKEGNIPKPKLLQEAIQA---- 158
Query: 171 ICSQSTPVSSNKSKESNVLVLSQ-TASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRK 227
I S N ES L++ T T +++ + +DP+ R E++ V+ L + K
Sbjct: 159 IRGTKRVDSKNADTESENENLAKFTIDMTALAREK-KIDPVIGREEEIRRVVRILSRRTK 217
Query: 228 RNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
N V++GE VV G+ +I DVP+ L+ K L L + +
Sbjct: 218 NNPVLIGEPGVGKTTVVEGLAQRIVNRDVPDNLKACKLLSLDVGAL 263
>gi|414171579|ref|ZP_11426490.1| chaperone ClpB [Afipia broomeae ATCC 49717]
gi|410893254|gb|EKS41044.1| chaperone ClpB [Afipia broomeae ATCC 49717]
Length = 877
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A TLA R GH Q TPLH+ +L S GL +S + +A+ AL +
Sbjct: 14 IQSAQTLAMREGHQQFTPLHILKVLLDDSEGLAGGLIDRSGGN---SRAILKATEDALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG----SIENQQQPLLAVKIELEQL 135
+P S G P + A AA QA ++ G ++E Q L A K
Sbjct: 71 MP-KVSGAGAGQVYLAPATARAFDAA---EQAAEKAGDSFVTVERLLQALAADK------ 120
Query: 136 IISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
D ++ + G + + + ++ ++ + + L+Q A
Sbjct: 121 ------DSDAGALLAKGGVTPQNFNAAINALRKGRTADSASAENAYDALKKYARDLTQAA 174
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
K LDP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 175 HDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIIN 227
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE L+D K L L + + R E E+R++ + + V S G+ I+
Sbjct: 228 GDVPEGLKDKKVLSLDMGALIAGAKYRGEFEERLKAVLSEVTSSDGQIILF 278
>gi|365856785|ref|ZP_09396795.1| ATP-dependent chaperone protein ClpB [Acetobacteraceae bacterium
AT-5844]
gi|363717528|gb|EHM00900.1| ATP-dependent chaperone protein ClpB [Acetobacteraceae bacterium
AT-5844]
Length = 862
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 37/300 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T A ++ A T+A R H +VTP H+ +L A+ GL+R A + P K
Sbjct: 6 FTERARGFLQAAQTIAIREYHQRVTPEHLLKALLDDEQGAAAGLIRAAG----ADPNPVK 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
A + + +LP G QF P I L AA + QA + S Q + L+
Sbjct: 62 A---AVDAEVAKLPKVQGAG--AGQPQFVPEIVRVLDAA--QQQATKAGDSFVAQDRLLV 114
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A ++ D P+ R + AG ++ +++ VE + V S + E
Sbjct: 115 A---------LAASDTPA-GRALVAAGATAQKLEGAVEA------VRKGRKVDSANA-EQ 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 QFDALKKYARDLTAAARDGKLDPVIGRDEEIRRAIQVLARRTKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEALR+ + L L + + R E E+R++ + + + G I+
Sbjct: 218 EGLALRIVNGDVPEALRNKRVLALDLGAMVAGAKYRGEFEERLKGVLTEIETAAGEIILF 277
>gi|340777463|ref|ZP_08697406.1| Clp protease ATP-binding subunit ClpB [Acetobacter aceti NBRC
14818]
Length = 615
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 31/299 (10%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
Q T + ++ A T+A R + Q+TP H+ ML + G + + +PL +
Sbjct: 4 QKFTERSRGFLQAAQTIALREYNQQLTPEHLLKAMLDDNEGAASSLIKAAGGNPLGALS- 62
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLA 127
AL +LP + GG P + LV A+ A + S Q + L+A
Sbjct: 63 --AVEEALAKLP-----KVQGGGAGQPQATPDLVRLLDNAEQAAQKANDSFVAQDRLLVA 115
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ D + R +++ G S+ +E+AV+ + V+S + E+
Sbjct: 116 IAAS----------DTAAGRALKDNGASA----DALEKAVA--TVRKGRTVTSENA-EAG 158
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L + A LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 159 FDALKKYARDVTAVALAGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVE 218
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEALR+ K L L + + R E E+R++ + + S G+ I+
Sbjct: 219 GLAQRIVNGDVPEALRNKKLLSLDMGALIAGAKYRGEFEERLKAVLKEIESAEGQVILF 277
>gi|85083984|ref|XP_957228.1| heat shock protein 101 [Neurospora crassa OR74A]
gi|44889002|sp|P31540.2|HSP98_NEUCR RecName: Full=Heat shock protein hsp98; AltName: Full=Protein
aggregation-remodeling factor hsp98
gi|28918316|gb|EAA27992.1| heat shock protein 101 [Neurospora crassa OR74A]
Length = 927
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTGLLRTAC 56
T A ++ AM LA + H+Q+ P+H+A +L A++ L R
Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
++H P + + AL RLP+ P H +++ + ++A Q+
Sbjct: 67 ERAHGDP---QLFDRALKKALVRLPSQDPPP---DHV---SMAPSFHTVLRKANELQK-- 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q+ +AV + LI ++ ++PS+ ++EA ++ ++ QA+ ++
Sbjct: 116 ---TQKDTYIAV----DHLITALAEEPSIMNALKEANIPKPKLVTDAIQAIR---GTKRV 165
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E + + T T +++ +DP+ R E++ VI L + K N V++G
Sbjct: 166 DSRNADTEEEHENLAKFTIDMTAMAR-EGKIDPVIGREEEIRRVIRILSRRTKNNPVLIG 224
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E VV G+ +I DVP+ L + K L L + +
Sbjct: 225 EPGVGKTTVVEGLAQRIVNADVPDNLANCKLLSLDVGAL 263
>gi|58579335|ref|YP_197547.1| ClpB protein [Ehrlichia ruminantium str. Welgevonden]
gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium str. Welgevonden]
Length = 863
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 45/301 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAAS---TGLLRTACLQSHSHPLQCKALELCFNV- 75
+ QA T A GH + P H+ ML +L T+C C L +V
Sbjct: 18 IVQAQTSAVALGHQSLVPEHLLKVMLDDKDEIVEVLLTSC--------GCNVETLRNDVI 69
Query: 76 -ALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELE 133
ALN+LP S P GH ++ L A A+ HQ + +E
Sbjct: 70 SALNKLPV-VSGPG-SGHIHLSKEMAQVLQEAVNLAKRHQDS-------------YVTVE 114
Query: 134 QLI--ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+L+ ++I+ D +VSR++ G + +++S + V++ +++ V+S E L
Sbjct: 115 RLLQALTIIKDSNVSRILIAHGVTPQKLESLI---VNMRNGARADSVNS----EQKFNAL 167
Query: 192 SQTA-SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
+ A T+V++ LDP+ R+E++ I+ L+ + K N V++GE ++ G+
Sbjct: 168 KKYAKDVTEVARAG-KLDPVIGRDEEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIIEGLA 226
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
KI KGDVP LRD++ + L + R E E+R++ + N + S G I+L + +
Sbjct: 227 HKIVKGDVPIGLRDMRIMSLDLGMLVAGTKYRGEFEERLKAVVNEIVSSNG-SIILFIDE 285
Query: 307 L 307
L
Sbjct: 286 L 286
>gi|336469637|gb|EGO57799.1| heat shock protein [Neurospora tetrasperma FGSC 2508]
gi|350290715|gb|EGZ71929.1| heat shock protein [Neurospora tetrasperma FGSC 2509]
Length = 927
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTGLLRTAC 56
T A ++ AM LA + H+Q+ P+H+A +L A++ L R
Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
++H P + + AL RLP+ P H +++ + ++A Q+
Sbjct: 67 ERAHGDP---QLFDRALKKALVRLPSQDPPP---DHV---SMAPSFHTVLRKANELQK-- 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q+ +AV + LI ++ ++PS+ ++EA ++ ++ QA+ ++
Sbjct: 116 ---TQKDTYIAV----DHLITALAEEPSIMNALKEANIPKPKLVTDAIQAIR---GTKRV 165
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E + + T T +++ +DP+ R E++ VI L + K N V++G
Sbjct: 166 DSRNADTEEEHENLAKFTIDMTAMAR-EGKIDPVIGREEEIRRVIRILSRRTKNNPVLIG 224
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E VV G+ +I DVP+ L + K L L + +
Sbjct: 225 EPGVGKTTVVEGLAQRIVNADVPDNLANCKLLSLDVGAL 263
>gi|378731152|gb|EHY57611.1| hsp98-like protein [Exophiala dermatitidis NIH/UT8656]
Length = 932
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 43/283 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-------------------ASTGLL 52
T +A + A LA + H+Q+ P+H+A + AS L
Sbjct: 8 FTDRSAKALTDAANLAEQYAHSQILPVHLAVALFDPSPDESKDQQTTANASQQHASAPLF 67
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH 112
R ++H + L+ AL RLP+ P + T+S AL + A
Sbjct: 68 RQVVERAHG---DTQLLDRALKKALVRLPSQDPPP------EHVTMSPALAKVIRSATEL 118
Query: 113 QRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEIC 172
Q+ Q+ +A+ + LI++++ DP + ++EA +T++ N Q +
Sbjct: 119 QK-----TQKDSFVAI----DHLIVALVQDPKIQECLKEANVPNTKLIDNAIQQIR---G 166
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
++ + ++E N + T T++++ LDP+ R E++ VI L + K N
Sbjct: 167 TKRVDSKTADTEEENENLKKFTIDMTQLAR-EGKLDPVIGREEEIRRVIRILSRRTKNNP 225
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
V++GE ++ G+ +I DVP L + L L + S
Sbjct: 226 VLIGEPGVGKTTIIEGLAQRIINADVPANLAACRLLSLDVGSL 268
>gi|399543782|ref|YP_006557090.1| chaperone protein ClpB [Marinobacter sp. BSs20148]
gi|399159114|gb|AFP29677.1| Chaperone protein ClpB [Marinobacter sp. BSs20148]
Length = 858
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ S + A +LA + H + PLH+ +L + ++ Q+ P + +
Sbjct: 6 LTSRLQSALADAQSLAVGKDHNFIEPLHLIQALLDQESSSIKPLLKQAGGEPTRIR---- 61
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ + S P + G +SN + F A A +R+ + + LLA
Sbjct: 62 --QAVIKEI---ESLPEVKGSAGDVAMSNDMGRLFNIADKLAQRRKDQFVSSELMLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
++ D S+ RV+RE G ++ +E A E + + ++ + +
Sbjct: 115 --------ALEDRGSLGRVLREQGVDKAALEKAIENARGGESVDDAGAEENRQALDKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A + K LDP+ R++++ I+ L +RK N V++G+ +V G+
Sbjct: 167 DLTEMAESGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGDPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE L++ + L L + S
Sbjct: 220 AQRIVNGEVPEGLKNKRVLSLDMGSL 245
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E + L + AL K+V Q + V +AN V + R+G R G F
Sbjct: 548 VSKMLEGERDKLMRMEEALHKRVIGQNEAVEAVANAVRRSRAGLSDPHRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTDDAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|347739276|ref|ZP_08870577.1| ATP-dependent chaperone protein ClpB [Azospirillum amazonense Y2]
gi|346917470|gb|EGX99833.1| ATP-dependent chaperone protein ClpB [Azospirillum amazonense Y2]
Length = 880
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 30/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + V+ A TLA R GH + P H+ +L S GL S + P +AL
Sbjct: 6 FTERSRGFVQAAQTLALRGGHQTLNPEHLLKVLLDDSEGLAANLLRSSGADP--ARALS- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQPLLAVK 129
AL ++P S P G Q ++S L F A Q Q+ G S ++ LLA
Sbjct: 63 GVEAALAKMPV-VSGP---GAGQI-SLSRELAKVFDSALQLAQKAGDSFVTAERLLLA-- 115
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+++ + + ++V+ EAG + + ++ S + +
Sbjct: 116 -------LTMAEGTTAAKVLAEAGAKPQALNQAINALRKGRTADSASAEQSYDALKKYAR 168
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 169 DLTQAARDGK-------LDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGL 221
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE L++ + + L ++ R E E+R++ + ++S G IV
Sbjct: 222 ALRIVNGDVPEGLKNKRLMALDLAGLVAGAKFRGEFEERLKAVLQEIQSAAGEVIVF 278
>gi|425066581|ref|ZP_18469701.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
gi|404381369|gb|EJZ77846.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
Length = 855
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 37/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
T + +++A +LA + + + P+H+ T+L ST + TA + PL
Sbjct: 6 FTTKFQQALQEAQSLAIGKDNQFIEPVHLLTTLLNQQGGSTAPILTAS--GANLPL---- 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L N LNRLP + + GG Q ++ N L K AQ Q +
Sbjct: 60 LRNELNAELNRLPQVSGS---GGDVQVSRSLVNLLNLCDKLAQQRQDKF----------- 105
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E +++ L+D ++ V+++ G ++ +E+ + + S ++ E
Sbjct: 106 --ISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQALEKY 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 TIDLTARAESGK-------LDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVE 216
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 217 GLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILF 275
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + + ++N + + R+G R G F
Sbjct: 547 VAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F N V I +S F + S
Sbjct: 601 ------LFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVG 654
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + + ++ GR+ G V +
Sbjct: 655 YEEGGYL---TEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNT 711
Query: 775 IVILS 779
+VI++
Sbjct: 712 VVIMT 716
>gi|393766590|ref|ZP_10355145.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
gi|392727908|gb|EIZ85218.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
Length = 874
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 42/306 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A LA R GH Q+ P H+ +L GL+ A QS
Sbjct: 7 TERARGFVQAAQNLAMREGHPQLQPGHLLKVLLDDPEGLCAGLIDRAGGQSR-------- 58
Query: 69 LELCFNVALNRLPA-STSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQPL 125
VAL + P + G+ P + L+ F A QA ++ G S ++ L
Sbjct: 59 ------VALAQTDQWLAKQPKVSGNASAPQATRELMRLFDTAEQAAKKAGDSYVTVERLL 112
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
LA+ +E D R ++ AG + + + + + + N S E
Sbjct: 113 LALAVE---------KDSEAGRALQAAGVTPASLNAAIN-------ALRKGRTADNASAE 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L + A + LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 157 NAYDALKKYARDLTEAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAI 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVPE+LRD L L + S R E E+R++ + + V + G GI+
Sbjct: 217 VEGLALRIVNGDVPESLRDKSLLALDMGSLIAGAKYRGEFEERLKGVLSEVTAAEG-GII 275
Query: 302 LNLGDL 307
L + ++
Sbjct: 276 LFIDEM 281
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 550 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 604 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 652
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 653 PGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 712
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 713 NTLLIMTS 720
>gi|418940344|ref|ZP_13493712.1| ATP-dependent chaperone ClpB [Rhizobium sp. PDO1-076]
gi|375052964|gb|EHS49363.1| ATP-dependent chaperone ClpB [Rhizobium sp. PDO1-076]
Length = 866
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ P KA+ L + AL +
Sbjct: 14 LQSAQTYALSEGHQQFTPEHVLKVLLDDDQGMASSLISRAGGDP---KAIRLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP + GG Q ++ L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVS-----GGDGQV-YLAAPLAKVFSTAEDAAKKAGDSFVTVERLLLALAIE------ 118
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
S S +++ G ++ + + Q ++ E+ T S+N E L + A
Sbjct: 119 ---SSASTSASLKKGGVTA----NGLNQVIN-EVRKGRTADSANA--EQGFDALKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEARDGRLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L++ K + L + S R E E+R++ + N V+S G I+
Sbjct: 229 VPESLKEKKLMALDMGSLIAGAKYRGEFEERLKAVLNEVQSENGEIILF 277
>gi|358398145|gb|EHK47503.1| hypothetical protein TRIATDRAFT_157453 [Trichoderma atroviride IMI
206040]
Length = 925
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG---------------LLRTAC 56
T A ++ AM++A + GH+Q+ P+H+A ++L S L R A
Sbjct: 7 FTDRAQKAIEDAMSMAEQYGHSQLLPVHLAVSLLEPSIDQSKDQQNGPPQNTITLFRQAI 66
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
++H P + L+ +L RLP+ P ++S + A ++AQ Q+
Sbjct: 67 ERAHGDP---QLLDRALKKSLVRLPSQDPPP------DQVSLSPSFHAVLRKAQELQK-- 115
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q+ +AV + LI ++ +D S+ ++E ++ V++AV ++
Sbjct: 116 ---VQKDTYIAV----DHLITALTEDASIQAALKEGNIPKPKL---VQEAVQGIRGTRRV 165
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ +++ N + T T +++ + +DP+ R E++ V+ L + K N V++G
Sbjct: 166 DSKNADTEQENENLAKFTIDMTALARDK-KIDPVIGREEEIRRVVRILSRRTKNNPVLIG 224
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E V G+ +I DVP+ L+ K L L + +
Sbjct: 225 EPGVGKTTVAEGLAQRIVNRDVPDNLKACKLLSLDVGAL 263
>gi|295676449|ref|YP_003604973.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
gi|295436292|gb|ADG15462.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
Length = 865
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS--HSHPLQCKAL 69
LT + + A +LA + + P+HV ++A G R+ ++ H PLQ
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLAALVAQQDGSARSLLSRAGVHVQPLQT--- 62
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
N A+ RLP T G+ Q I L +A + + Q L
Sbjct: 63 --ALNDAITRLPQVRGTD---GNVQ---IGRELTGLLNQA---------DKEAQKLNDTF 105
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E ++++ DD V R+ RE G S +++ + S ++ +
Sbjct: 106 IASEMFLLAVADDKGDVGRLAREHGLSRKALETAIAAVRGGSQVHSQDAESQREALKKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 166 IDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE L++ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 219 LAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
Length = 858
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A +K+A ++ R+ H V H+ ++L GL+ ++ + + L
Sbjct: 6 FTEKAQVALKEAQDISVRKSHQTVDAEHLLQSLLEQENGLVPKLLSKAGGN---IETLSS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N +L+++PA + G ++ LV RAQ ++ + L +
Sbjct: 63 RLNQSLDKIPAVSGA---GSTYMTQRMNQILV----RAQ---------DEAKNLTDEYVS 106
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+E L++++ +D ++S+++ E+G + + Q + + + P + ++ E L
Sbjct: 107 VEHLVLAMFEDTTISKLLSESGVTRASFMEAMTQVRGNQRITSANPEDTYEALEKYGRDL 166
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R+ ++ VI+ L + K N V++GE + G+
Sbjct: 167 TEMAEQNK-------LDPVIGRDTEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAR 219
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVP++L+D + + L + + R E E+R++ + V GR I+L + +L
Sbjct: 220 RIVAGDVPDSLKDRRIVSLDMGALVAGAKYRGEFEERLKAVLQEVTQSAGR-IILFIDEL 278
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
+ E E L L + L ++V Q + V + + V++ RSG R G F
Sbjct: 549 RLLEGEKEKLLRLDDILHERVIGQDEAVNAVTDAVIRARSGLKDPKRPIGSF-------- 600
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF--SSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F S N + I +S + T A D
Sbjct: 601 ----IFLGPTGVGKTELARALAESLFDSEENMIRIDMSEYMEKHTVARLIGAPPGYVGYD 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
E + EAV P+ V L +++E+A Y + ++ GR+ S G V +
Sbjct: 657 EGG-----QLTEAVRRKPYSVLLFDEIEKAHYDVFNVLLQILDDGRLTDSHGRTVDFKNT 711
Query: 775 IVILSC 780
I+I++
Sbjct: 712 IIIMTS 717
>gi|311113965|ref|YP_003985186.1| chaperone protein ClpB [Gardnerella vaginalis ATCC 14019]
gi|310945459|gb|ADP38163.1| chaperone protein ClpB [Gardnerella vaginalis ATCC 14019]
Length = 868
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 30/304 (9%)
Query: 5 GCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPL 64
G ++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ +
Sbjct: 2 GVNMEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQTGADAQ 61
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQP 124
Q A AL LP+ST G P S L+AA +A+ R E
Sbjct: 62 QIGA---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRTMGDEY---- 109
Query: 125 LLAVKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
+ E ++I I+ +V+ + ++ S+ ++ V V+S
Sbjct: 110 -----VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPD 158
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ E N L + + LDP+ R++++ VI+ L + K N V++GE
Sbjct: 159 A-EGNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGK 217
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGR 298
VV G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+
Sbjct: 218 TAVVEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQ 277
Query: 299 GIVL 302
I
Sbjct: 278 IITF 281
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 558 VGRLMQGENEKLLNMEKELSKRVVGQSEAIRAIADAVRRSRAGIADPNRPTGSF------ 611
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 612 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 658
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 659 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTV 717
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 718 DFTNTILIMTS 728
>gi|376298110|ref|YP_005169340.1| ATP-dependent chaperone ClpB [Desulfovibrio desulfuricans ND132]
gi|323460672|gb|EGB16537.1| ATP-dependent chaperone ClpB [Desulfovibrio desulfuricans ND132]
Length = 865
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + V +A LA R GH Q+ H+ + ++A GL + P A
Sbjct: 6 FTRKTQEAVSEAQNLAIRSGHQQIDCEHLMHALVAQENGLAGQILRKLGVAP---DAYLG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ + ++P+ + + G ++ + A A ++R E +
Sbjct: 63 AIDAEIAKMPSVSGS---GARPDQVMVTQRMQQALVAADDMRKRMKDEY---------VS 110
Query: 132 LEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E + ++++D+P V RV ++ G +V + +E+ + + P ++ +S +
Sbjct: 111 VEHVFVALMDEPGNSGVGRVNKQFGLDKNKVLAALEEVRGKQRVTSDNPEATYESLKKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A + K LDP+ R+ ++ VI L + K N V++GE + G
Sbjct: 171 RDLVEEARSGK-------LDPVIGRDSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I KGDVPE L+D L +S+ R E E+R++ + V GR I+
Sbjct: 224 LAQRIVKGDVPEGLKDKTVFSLDMSALVAGAKYRGEFEERLKAVLKEVAESEGRIIMF 281
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E E L L + L ++V Q V +A+ VL+ R+G KD + +
Sbjct: 555 VSRLMEGEREKLLRLADVLHERVIGQDQAVQAVADAVLRARAG-------LKDPT--RPI 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF--SSTRADSTEDSRNKRSRDE 715
F G K ++ K LA +F + +N V I +S + T A DE
Sbjct: 606 GSFIFLGPTGVGKTELCKTLASALFDTEDNMVRIDMSEYMEKHTVARLIGAPPGYVGYDE 665
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV P+ V L +++E+A + + ++ GR+ S G V + I
Sbjct: 666 GG-----QLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI 720
Query: 776 VILS 779
VI++
Sbjct: 721 VIMT 724
>gi|350560805|ref|ZP_08929645.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349783073|gb|EGZ37356.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 857
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R H + P+HV +L G R Q+ + Q ++
Sbjct: 6 LTTKFQEALADAQSLAVGRDHQFIEPVHVLAALLNQEGGTARPVLAQAGGNVNQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL RLP TP G N L+ + A QR+ + + LLA
Sbjct: 63 ALDDALGRLPRVEGTP---GEVHVSNDLNRLLNVSDKL-AQQRKDQYISSELFLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
++ D + +++ AG +S ++ VEQ + + ++ E + L
Sbjct: 115 ------AVQDRGPAAEILKRAGVTSGALEKAVEQMRGGASVDDPSAEDTRQALEKYTIDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R++++ ++ L + K N V++GE +V G+
Sbjct: 169 TERAEQGK-------LDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKC 265
+I G+VPE L+D +
Sbjct: 222 RIINGEVPEGLKDKRV 237
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + A+ ++V Q++ + +AN + + R+G R G F
Sbjct: 548 VSKMLEGEKDKLLRMEEAIGQRVVGQEEAMRAVANAIRRARAGLSDPNRPSGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELTKALAAFLFDTEDAMVRIDMSEFMEKHSVARMIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|302529318|ref|ZP_07281660.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302438213|gb|EFL10029.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 874
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 31/295 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + A T A R G +V H+ +L S GL ++ + P + LE
Sbjct: 6 LTRKSQEALHDAQTAALRYGQPEVDGEHLLLALLDQSDGLASRLLEEAGADPAR---LEQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
AL+R P + + G + ++ L AA + A G +++ +
Sbjct: 63 ELEAALSRRPKVSGPGVTPGETRVTARLARVLDAADREA------GRLKDDY-------V 109
Query: 131 ELEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+E L+ ++L++ S S R++R AG + + + + + + +TP S+ ++ E
Sbjct: 110 SVEHLLAALLEEGSSSAAGRLLRGAGLTRDKFLEVLRKVRGNQRVTSATPESAYEALEKY 169
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L A+A K LDP+ R+ ++ VI+ L K K N V+ G+ +V
Sbjct: 170 GRDLVADAAAGK-------LDPVIGRDAEIRRVIQILSRKTKNNPVLTGDPGVGKTAIVE 222
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
G+ +I++GDVPE L+ L + + R E E+R++ + N V + GR
Sbjct: 223 GLAQRIDRGDVPEGLKGKTVFSLDLGALVAGAKYRGEFEERLKAVLNEVTAAEGR 277
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + +E E L L L ++V Q + V +A+ +++ RS + KD +
Sbjct: 556 VSRLQEGEREKLLRLDELLHERVIGQDEAVQLVADAIIRARS-------RIKDPR--RPI 606
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR---- 713
F G K ++AK LA +F + +N V I +S + R+ SR
Sbjct: 607 GSFLFLGPTGVGKTELAKALAADLFDTEDNIVRIDMSEYQE---------RHTVSRLVGA 657
Query: 714 DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y E + EAV P+ V L +++E+A + ++ GR+ + G V
Sbjct: 658 PPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRLTDAQGRTVDF 717
Query: 772 GDAIVILSC 780
+ ++I++
Sbjct: 718 RNTVIIMTS 726
>gi|18414279|ref|NP_567437.1| casein lytic proteinase B2 [Arabidopsis thaliana]
gi|347602480|sp|F4JVJ1.1|CLPB2_ARATH RecName: Full=Putative chaperone protein ClpB2, chloroplastic;
AltName: Full=ATP-dependent Clp protease ATP-binding
subunit ClpB homolog 2; AltName: Full=Casein lytic
proteinase B2
gi|332658073|gb|AEE83473.1| casein lytic proteinase B2 [Arabidopsis thaliana]
Length = 623
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 67/298 (22%)
Query: 17 ASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVA 76
AS AM+L+ H QVTPLH+ T+++ T + A + + +++ N +
Sbjct: 15 ASARSHAMSLS----HGQVTPLHLGVTLISDLTSVFYRAITSAGDGDISAQSVVNVINQS 70
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L +L ++ L K+ + L+
Sbjct: 71 LYKL----------------------------------------TKRNLGDTKVGVAVLV 90
Query: 137 ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
IS+L+D +S V++EAG +VKS VE+ V++ +
Sbjct: 91 ISLLEDSQISDVLKEAGVVPEKVKSEVEKL------------------RGEVILRALKTY 132
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
T + + LDP+ R+ ++ VIE L + K N V++GE VV G+ +I KG
Sbjct: 133 GTDLVEQAGKLDPVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKG 192
Query: 255 DVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWA 310
DVP L VK + L + R + E+R++ + V G+ +VL + ++ A
Sbjct: 193 DVPINLTGVKLISLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGK-VVLFIDEIHMA 249
>gi|209519546|ref|ZP_03268339.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
gi|209500025|gb|EEA00088.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
Length = 865
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS--HSHPLQCKAL 69
LT + + A +LA + + P+HV ++A G R+ ++ H PLQ
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLAALVAQQDGSARSLLSRAGVHVQPLQT--- 62
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
N A+ RLP T G+ Q I L +A + + Q L
Sbjct: 63 --ALNDAITRLPQVRGTD---GNVQ---IGRDLTGLLNQA---------DKEAQKLNDTF 105
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E ++++ DD V R+ RE G S +++ + S ++ +
Sbjct: 106 IASEMFLLAVADDKGDVGRLAREHGLSRKALETAIAAVRGGSQVHSQDAESQREALKKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 166 IDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE L++ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 219 LAQRIINGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|410460971|ref|ZP_11314624.1| ATP-dependent chaperone ClpB [Bacillus azotoformans LMG 9581]
gi|409926176|gb|EKN63372.1| ATP-dependent chaperone ClpB [Bacillus azotoformans LMG 9581]
Length = 869
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 30/303 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T + + + +LA R+GH QV HV +++L G+ + + + +P + L
Sbjct: 6 MTEKTQEALVNSQSLAVRKGHQQVDVEHVFSSLLTQEDGITTSILQKLNINPGTVQKL-- 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
ALN+LP + + + G I+ L + RA E++ L I
Sbjct: 64 -VEEALNKLPKVSGSGVESGAV---YITQRLQSLLVRA---------EDEASRLKDEYIS 110
Query: 132 LEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E LI+++ D+ ++++ ++ GF + + + + + TP + + +
Sbjct: 111 VEHLILAMTDEKQTTEIAKIFQQIGFDRASLLKVLTEVRGNQRVTSPTPEVTYDALKKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + K+ DP+ R+ ++ VI L K K N V++GE +V G
Sbjct: 171 RDLVEDVKKGKI-------DPVIGRDAEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I + DVPE L+D L +SS R E E+R++ + N V+ GR I+L +
Sbjct: 224 LAQRIVRKDVPEGLKDKTIFSLDMSSLVAGAKYRGEFEERLKAVLNEVKKSNGR-ILLFI 282
Query: 305 GDL 307
+L
Sbjct: 283 DEL 285
>gi|354557532|ref|ZP_08976790.1| ATP-dependent chaperone ClpB [Desulfitobacterium metallireducens
DSM 15288]
gi|353550326|gb|EHC19763.1| ATP-dependent chaperone ClpB [Desulfitobacterium metallireducens
DSM 15288]
Length = 863
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 29/264 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + A +A R G+++V P H+ +L G++ + L ALE
Sbjct: 8 FTQKSQEAIINAQNMAERNGNSEVEPEHLLLALLEQEDGVVSQVLTKLK---LAVGALEQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+NR P + GG+ Q TIS+ L AH ++ +
Sbjct: 65 KTRETINRFPRIS-----GGNVQL-TISSRLRTTL--VSAHDEMAIFNDEY-------VS 109
Query: 132 LEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++++L +V ++++EAG + ++ + + + + P + ++ E
Sbjct: 110 TEHILLALLSRAGGAVEQILKEAGLTREKLLQALREVRGTQRVTSQNPEGTYQALEQYGR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + A R LDP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 170 NLVEQAR-------RGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSIS 271
+I +GDVPE+++D K + L +
Sbjct: 223 AQRIVRGDVPESVKDKKLIALDMG 246
>gi|242067163|ref|XP_002448858.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
gi|241934701|gb|EES07846.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
Length = 1050
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 219/520 (42%), Gaps = 79/520 (15%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG-LLRTACLQ----SHSHP 63
+Q L A + + A+ ARRR HAQ T LH+ ++LA + LLR A + ++S
Sbjct: 9 RQCLAPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARARSAAYSPR 68
Query: 64 LQCKALELCFNVALNRL--PASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQ 121
LQ KAL+LCF V+L+RL ++S+ P ++N+L+AA KR+QA+QRR
Sbjct: 69 LQLKALDLCFAVSLDRLPSTPTSSSASSSNDQHEPPVANSLMAAIKRSQANQRRNPD--- 125
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV-EQAVSLEICSQSTPVSS 180
+ PS SRV +AGF S ++K + A + + +++ +
Sbjct: 126 -----TFHFYHHHHQAAASPTPS-SRVFADAGFRSNEIKVAILRPAPPVPLLARAGLPTR 179
Query: 181 NKSKESNVLVLSQTASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ L L A+A P + ED I ++++ R RN ++VG
Sbjct: 180 ARPPP---LFLCSFAAADDADVPSPA-GAAPGEDNCRRIADILA-RGRNPMLVG------ 228
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+ + LP+ +S + N+ ++ L + G GI
Sbjct: 229 -------VGAASAAADFANASPYRILPVGPASV-NQNQTDL---------LAVATPGSGI 271
Query: 301 VLNLGDL-EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENAR--FWLMGI-ATFQ 356
+ ++GDL + A + R ++ E+ +L+ R W+MG AT++
Sbjct: 272 IFSIGDLKDLVPDEADLQDAAR-------RVVAEVTRLLETHRAAGRHTVWVMGWSATYE 324
Query: 357 SYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITTDSDLQSQ----------STSKKAES 406
+Y+ S P ++ W L L I A + T + S +T+ ES
Sbjct: 325 TYLAFLSKFPLVDKDWELQLLPITAVRDARPCSRTRASSSSSKPRLLPCPMPATTSFMES 384
Query: 407 GVSW--LLFEGEEEN--KQLTCCADCSAKFEAE-ARSLQSSSCNSDSPTSSLPAWLQQ-- 459
V + L + E N Q C C+ ++E E A ++ S +++ LP+ LQ
Sbjct: 385 FVPFGGFLCDPYEANSCPQALRCQQCNDRYEQEVATIIRGSGITAEAHQDGLPSMLQNGS 444
Query: 460 --YKNEKKATLSNNDKD----SGVRDLCKKWNSICNSIHK 493
N L D + +++L KKWN C +H+
Sbjct: 445 MMGPNNGFDVLKVRDDQMVLSTKIQNLKKKWNEYCLRLHQ 484
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 608 NLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDA 667
N L L K V Q++ + I ++ +CRS RR+G K K + W F G D+
Sbjct: 654 NYKLLMERLFKAVGRQEEALSAICASIERCRS-MERRRGANK-----KNDIWFSFYGPDS 707
Query: 668 DAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEA 727
AK ++ + LA L+ G N + + LS + R KR+ D C AE
Sbjct: 708 IAKRRVGEALAELMHGGSENLIYLDLSLHDW----GNPNFRGKRATD---C-----IAEE 755
Query: 728 VSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS-LGDAIVILS 779
+ H V ++++++AD Q+ A+E+GR G V+ L ++IV+LS
Sbjct: 756 LRKKRHSVIFLDNIDRADCLVQESLIHAMETGRYKDLHGGRVADLNNSIVVLS 808
>gi|409439213|ref|ZP_11266272.1| Chaperone [Rhizobium mesoamericanum STM3625]
gi|408749118|emb|CCM77451.1| Chaperone [Rhizobium mesoamericanum STM3625]
Length = 867
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 27/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ P KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGDP---KAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + GG+ Q ++ L A+ ++ + V+ L+ L I
Sbjct: 71 LPKVS-----GGNGQI-YLAQPLAKVLSTAEEASKKAG-----DSFVTVERLLQALAIE- 118
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
S S ++ AG ++ + + EI T SSN E L + A
Sbjct: 119 -SSASTSTTLKNAGVTALALNQVIN-----EIRKGRTADSSNA--EQGFDSLKKYARDLT 170
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 171 GEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVP 230
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 231 ESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|146416239|ref|XP_001484089.1| hypothetical protein PGUG_03470 [Meyerozyma guilliermondii ATCC
6260]
Length = 900
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 31/269 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA----STGLLRTACLQSHSHPLQCK 67
T A +++ A +A+ HAQ+ PLH+ M+ + ST L+T ++ +
Sbjct: 6 FTDNALNIITNATQIAKEGSHAQLMPLHLLAAMVPSDNESSTPYLKTLITKAR---YEWP 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N + RLP+ P + ++ Q Q+ + QQ+
Sbjct: 63 DFERIVNRRVVRLPSQNPPP------------DTPAPSYATGQVLQKAAKFKTQQKDNY- 109
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I + +++++L+D S+ + +EAG ++ + S V + + + S + S
Sbjct: 110 --IAQDHILLALLEDASIKEIFKEAGINTETILSEVME------MRKGQRIDSRTADSSQ 161
Query: 188 VLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
K R +DP+ R E++ VI L + K N V++GE +V
Sbjct: 162 TFEFLSKYCEDLTEKAREGRIDPVIGREEEIRRVIRVLARRTKSNSVLIGEAGVGKTSIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
GV +I GDVP L + L + +
Sbjct: 222 EGVAQRIVDGDVPNVLSQARLFALDLGAL 250
>gi|5302773|emb|CAB46061.1| heat shock protein like [Arabidopsis thaliana]
gi|7268173|emb|CAB78509.1| heat shock protein like [Arabidopsis thaliana]
Length = 668
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 67/298 (22%)
Query: 17 ASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVA 76
AS AM+L+ H QVTPLH+ T+++ T + A + + +++ N +
Sbjct: 15 ASARSHAMSLS----HGQVTPLHLGVTLISDLTSVFYRAITSAGDGDISAQSVVNVINQS 70
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L +L ++ L K+ + L+
Sbjct: 71 LYKL----------------------------------------TKRNLGDTKVGVAVLV 90
Query: 137 ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
IS+L+D +S V++EAG +VKS VE+ V++ +
Sbjct: 91 ISLLEDSQISDVLKEAGVVPEKVKSEVEKL------------------RGEVILRALKTY 132
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
T + + LDP+ R+ ++ VIE L + K N V++GE VV G+ +I KG
Sbjct: 133 GTDLVEQAGKLDPVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKG 192
Query: 255 DVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWA 310
DVP L VK + L + R + E+R++ + V G+ +VL + ++ A
Sbjct: 193 DVPINLTGVKLISLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGK-VVLFIDEIHMA 249
>gi|90425750|ref|YP_534120.1| ATPase [Rhodopseudomonas palustris BisB18]
gi|90107764|gb|ABD89801.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB18]
Length = 879
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q +PLH+ +L S GL +S + +A+ ALN+
Sbjct: 14 IQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRSGGN---SRAILKATEDALNK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
+P S G P + A AA QA + G V +E L +++
Sbjct: 71 MP-KVSGAGAGQVYLAPDTARAFDAA---EQAADKAGDS--------FVTVERLLLALAL 118
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
D ++++ G + + + + +T ++ + + L+Q A K
Sbjct: 119 DRDSEAGALLKKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARDGK 178
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R+E++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 179 -------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVP 231
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
E+L+D K L L + + R E E+R++ + + V S G GI+L + ++
Sbjct: 232 ESLKDKKLLSLDLGALIAGAKYRGEFEERLKAVLSEVTSAEG-GIILFIDEM 282
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VEKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFDDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ +++++
Sbjct: 712 NTLIVMTS 719
>gi|309801709|ref|ZP_07695829.1| ATP-dependent chaperone protein ClpB [Bifidobacterium dentium
JCVIHMP022]
gi|308221651|gb|EFO77943.1| ATP-dependent chaperone protein ClpB [Bifidobacterium dentium
JCVIHMP022]
Length = 878
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LHV + +L G++R +Q+ +Q
Sbjct: 1 MEQKFTTMAQEAIGDAIQSASAAGNAQVDTLHVMDALLRQENGVIR-GLIQAAGGDVQ-- 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LPA++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPAAS-----GSTTSQPQASRQLTAAIAQA---------EKEMQAMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAEALRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKDGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIK 289
V G+ +I GDVP L++ K + L + S + R E E+R +EEIK
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIK 268
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEEYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|402848341|ref|ZP_10896604.1| ClpB protein [Rhodovulum sp. PH10]
gi|402501346|gb|EJW12995.1| ClpB protein [Rhodovulum sp. PH10]
Length = 869
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 31/294 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
V+ A +LA R GH Q P H+ +L G+ + +Q + + + AL +
Sbjct: 14 VQSAQSLALREGHQQFAPEHLLKVLLDDPEGMA-SGLIQRAGG--RARDVHAGVEAALKK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
P + G Q I L F A+ A + + S ++ LLA+ IE
Sbjct: 71 RPKVGGS----GAGQL-YIDPGLARVFDTAETAAEKAKDSFVTVERLLLALVIE------ 119
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
D +++ AG + + + +E S+ ++ + + L+Q A
Sbjct: 120 ---KDTEAGKILAAAGVTPQNLNAAIEALRKGRTADSSSAENAYDALKKYARDLTQAARD 176
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
K+ DP+ R+E++ I+ L + K N V++GE +V G+ +I GD
Sbjct: 177 GKI-------DPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGD 229
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
VPE+L D K L L + + R E E+R++ + V S G GIVL + ++
Sbjct: 230 VPESLADKKLLALDMGALIAGAKYRGEFEERLKAVLQEVTSSDG-GIVLFIDEM 282
>gi|306824225|ref|ZP_07457595.1| chaperone protein ClpB [Bifidobacterium dentium ATCC 27679]
gi|304552428|gb|EFM40345.1| chaperone protein ClpB [Bifidobacterium dentium ATCC 27679]
Length = 917
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LHV + +L G++R +Q+ +Q
Sbjct: 40 MEQKFTTMAQEAIGDAIQSASAAGNAQVDTLHVMDALLRQENGVIR-GLIQAAGGDVQ-- 96
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LPA++ G P S L AA +A E + Q +
Sbjct: 97 AIGAAVRNALVALPAAS-----GSTTSQPQASRQLTAAIAQA---------EKEMQAMGD 142
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 143 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAEALRKAVPGVRGGAKVTSPDAEGSYKALE 202
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 203 KYSTDLTAAAKDGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 255
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIK 289
V G+ +I GDVP L++ K + L + S + R E E+R +EEIK
Sbjct: 256 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIK 307
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + L K+V QK+ + +++ V + R+G R G F
Sbjct: 598 VGRLMQGENEKLLHMEEYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 651
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 652 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 698
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 699 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 757
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 758 DFKNTILIMTS 768
>gi|350563575|ref|ZP_08932396.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
gi|349778710|gb|EGZ33061.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
Length = 855
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 32/281 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + + Q+ +LA + + + PLH+ +++ LLR A + AL
Sbjct: 4 FTSQFQAALAQSQSLANSQDNQFIEPLHILASLMPEQGHLLRLAGVD-------VNALNQ 56
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L LP + T GG Q S A++ +R QA Q+ G + +E
Sbjct: 57 TVQAKLKTLPQVSGT---GGEVQLSRQSGAILNLMER-QA-QKNGDAYISSELFFQAALE 111
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ V+ ++++AG + ++ ++Q E S+ ++ E + L
Sbjct: 112 SKD---------QVADILKQAGAQANKLADAIQQVRGGESVQDQNAESTRQALEKYTIDL 162
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 163 TARAESGK-------LDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 215
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+I G+VPE LR + L L + S R E E+R++ +
Sbjct: 216 RIINGEVPEGLRHKRVLSLDLGSLLAGAKYRGEFEERLKAV 256
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E + L + ++L KV Q + V +++ + + R+G D + K
Sbjct: 547 VSRMMEGERDKLLRMEDSLSAKVVGQDEAVKAVSDAIRRSRAG-------LSDPN--KPN 597
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V + +S F + + +
Sbjct: 598 GSFLFLGPTGVGKTELTKSLADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQ 657
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 658 GGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIV 714
Query: 778 LSC 780
++
Sbjct: 715 MTS 717
>gi|429758129|ref|ZP_19290648.1| ATP-dependent chaperone protein ClpB [Actinomyces sp. oral taxon
181 str. F0379]
gi|429173788|gb|EKY15297.1| ATP-dependent chaperone protein ClpB [Actinomyces sp. oral taxon
181 str. F0379]
Length = 872
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 156/367 (42%), Gaps = 50/367 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++A V A+ A+ G+ QV LH+ +L G+ + ++P Q A
Sbjct: 6 FTSKAQEAVSSAVQSAQAAGNPQVDSLHLLEALLEQGEGIAYSLLQAIGANPQQIGA--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVA----AFKRAQAHQRRGSIENQQQPLLA 127
AL LP+++ G P S L+ A KRA+A +G
Sbjct: 63 RTRNALVALPSTS-----GSSVAQPQTSRGLIQVINDARKRAEA---KGD---------- 104
Query: 128 VKIELEQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+I++ +D S ++RE G ++ +++ +++ + P++S + S
Sbjct: 105 AYVSTEHLLIALAANDDSAGEILRENGATAERLQKALDEL-------RPDPITSADPEGS 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ T+V++ + LDP+ R+ ++ VI+ L + K N V++GE VV
Sbjct: 158 FEALKKYGRDLTEVAR-QGKLDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+L++ K + L ++ R E E+R++ + N + G I+
Sbjct: 217 EGLAQRIVAGDVPESLKNKKLIALDLTGMVAGAKYRGEFEERLKAVLNEIERSDGE-IIT 275
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
+ +L SE M+ G ++ + ++G T Y
Sbjct: 276 FIDELHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENI 324
Query: 363 SGHPSLE 369
P+LE
Sbjct: 325 EKDPALE 331
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + SE L + + + ++ QKD V +++ V + R+G R G F
Sbjct: 560 VGKLLQTESEKLVHMEDFIAHRLIGQKDAVRAVSDAVRRSRAGLSDPNRPTGSF------ 613
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S +S + +
Sbjct: 614 ------LFLGPTGVGKTELAKSLAEFLFDDERAMVRIDMSEYSEKHSVA-----RLVGAP 662
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y + + EAV P+ V L+++VE+AD + ++ GR+ G V
Sbjct: 663 PGYVGYEQGGQLTEAVRRRPYSVVLLDEVEKADPEIFNILLQVLDDGRLTDGQGRTVDFR 722
Query: 773 DAIVILSC 780
+ I+IL+
Sbjct: 723 NTILILTS 730
>gi|427736204|ref|YP_007055748.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
gi|427371245|gb|AFY55201.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
Length = 872
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 141/684 (20%), Positives = 258/684 (37%), Gaps = 100/684 (14%)
Query: 130 IELEQLIISILDDPSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I +E L+++ D + + +E G ++K ++Q + + P +S E
Sbjct: 108 ISIEHLLLAYARDDRFGKGLFKEFGIDERKLKDTIKQIRGSQKVTDQNPEGKYQSLEKYG 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q AS K LDP+ R++++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAASEGK-------LDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I GDVP++L+D K + L + + R E E+R++ + V G IVL +
Sbjct: 221 LAQRIIAGDVPQSLKDRKLIALDMGALIAGAKFRGEFEERLKAVLKEVTESQG-NIVLFI 279
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIG-----ENARFWLMGIATFQSYM 359
++ + + Q ++ ++ G+L C IG E ++ A + +
Sbjct: 280 DEIHTV--VGAGATQGAMDAGNLLKPMLARGELRC-IGATTLDEYRKYIEKDAALERRFQ 336
Query: 360 RCKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA---- 404
+ PS+E S+ H + I SL + ++ + + KA
Sbjct: 337 QVYVDQPSVEDTVSILRGLKERYEVHHGVKIADSSLVAAATLSNRYITDRFLPDKAIDLV 396
Query: 405 ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQS-SSCNSDSPTSSLPAWLQQYKNE 463
+ + L E + ++L + E E SLQ S S L L +K E
Sbjct: 397 DEAAARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRERLERLEKELADFKEE 456
Query: 464 KKATLSNNDKDSGVRDLCKKWNSICNSIHK---QPYYSERTLTFSSASPSSSTSGFSYDQ 520
++A LS + +D+ K S+ I + + +ER + A+ +
Sbjct: 457 QRA-LSGQWQSE--KDVITKIQSVKEEIDRVNVEIQQAERDYDLNRAA----------EL 503
Query: 521 QYPNFHKTHRDWAVVEPKQSWREH--HFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSS 578
+Y HR E + S +H L E ++ +E + S
Sbjct: 504 KYGKLTDLHRQLETAETELSQAQHSGKSLLREEVTEADIAE----------------VIS 547
Query: 579 NRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCR 638
P + K E E L L + L +V Q + V IA+ + + R
Sbjct: 548 KWTGIP-------------ISKLVESEKEKLLQLEDELHNRVVGQDEAVTAIADAIQRSR 594
Query: 639 SGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS 698
+G D + + F G K ++ K LA +F + V I +S +
Sbjct: 595 AG-------LADPN--RPIASFIFLGPTGVGKTELGKALASYMFDTEEAMVRIDMSEYME 645
Query: 699 TRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAI 756
A S Y E + EA+ P+ V L +++E+A + +
Sbjct: 646 KHAVS-----RLVGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQIL 700
Query: 757 ESGRIVTSSGDEVSLGDAIVILSC 780
+ GR+ S G V + I+I++
Sbjct: 701 DDGRVTDSQGRTVDFKNTIIIMTS 724
>gi|448526917|ref|XP_003869417.1| Hsp104 heat-shock protein [Candida orthopsilosis Co 90-125]
gi|380353770|emb|CCG23282.1| Hsp104 heat-shock protein [Candida orthopsilosis]
Length = 896
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 116/284 (40%), Gaps = 26/284 (9%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS--HSHPLQCKALE 70
T A +++ A L + + Q+ P+H+ + + LQ+ + A E
Sbjct: 7 TDNALRIIQNATNLCKENSNTQLQPIHLLAAFIPTDDTEKSSPYLQTLIQKARYEWPAFE 66
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
N L RLP+ P + + +++ Q Q IE QQ+ I
Sbjct: 67 RTVNKHLVRLPSQNPPP------------DDIRPSYQLGQVLQNAAKIEKQQKDYY---I 111
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ L++++L+D S+ + +EAG +K+ +LE+ S S+
Sbjct: 112 AQDHLLLALLEDQSIKDIFKEAGIKPDAIKTQ-----ALELRGDQRIDSRQADSSSSYEF 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ +DP+ R E++ VI L + K N V+VG+ +V GV
Sbjct: 167 LNKYCEDFTEKAREGRIDPVIGREEEIRRVIRVLARRSKSNSVLVGDAGVGKTSIVEGVA 226
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKN 290
+I GDVP L + + L + + + E E+R++ + N
Sbjct: 227 QRIVDGDVPNVLSNARLFSLDMGALTAGAKYKGEFEERLKGVLN 270
>gi|220925227|ref|YP_002500529.1| ATP-dependent chaperone ClpB [Methylobacterium nodulans ORS 2060]
gi|219949834|gb|ACL60226.1| ATP-dependent chaperone ClpB [Methylobacterium nodulans ORS 2060]
Length = 878
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 42/306 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A LA R GH Q+ P HV +L GL+ A QS
Sbjct: 7 TERARGFVQAAQALALREGHPQLAPGHVLKVLLDDPEGLCAGLIDRAGGQSR-------- 58
Query: 69 LELCFNVALNRLPA-STSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPL 125
VAL ++ A P + G P + L+ F A+ A ++ G S ++ L
Sbjct: 59 ------VALAQIEAWLAKQPKVSGAAAQPQATRDLMRLFDTAEKAAEKAGDSYVTVERLL 112
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
LA+ +E D + + AG ++ + + + + + N + E
Sbjct: 113 LALAVE---------KDSEAGKALSAAGVTAASLNAAIN-------ALRKGRTADNATAE 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L + A LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 157 NAYDALKKYARDLTEDAREGRLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAI 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVPE+LRD + L L + + R E E+R++ + + V + G GI+
Sbjct: 217 VEGLALRIVNGDVPESLRDKRLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEG-GII 275
Query: 302 LNLGDL 307
L + ++
Sbjct: 276 LFIDEM 281
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 32/223 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V +A V + R+G R G F
Sbjct: 554 VDKMLEGEREKLLAMEEALSKRVVGQREAVEAVATAVRRARAGLQDPNRPIGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V + +S + S R
Sbjct: 608 ------MFLGPTGVGKTELTKALANFLFDDETAMVRLDMSEYMEKHSVARLIGAPPG--- 658
Query: 711 RSRDEQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E A EAV P++V L +++E+A + ++ GR+ G
Sbjct: 659 ------YVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRT 712
Query: 769 VSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
V + +++++ S + P Q +D +E A + G
Sbjct: 713 VDFRNTLLVMT--SNLGAEYLVTQPEGQDTDAVRDEVMAVVRG 753
>gi|240278992|gb|EER42498.1| heat shock protein CLPA [Ajellomyces capsulatus H143]
Length = 925
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 47/303 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L A+S L
Sbjct: 6 LTDRANKALVDAHALAEQHAHPQLLPIHLAVSLLDPPADESKDQQVTTHPSHQASSASLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH 112
+ ++H P + L N +L RLP+ P P IS L +A ++
Sbjct: 66 KRVVEKAHGDP---QLLARALNRSLVRLPSQDPPPETIAPS--PAISKVLRSATNLSK-- 118
Query: 113 QRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEI 171
Q+ +A+ + LI ++ +DP + R + +A + + + S ++Q ++
Sbjct: 119 -------TQKDSYVAI----DHLIAALAEDPVIQRALADANIPNVKLIDSAIQQIRGMKR 167
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
T + +S+ + T+ A + +DP+ R E++ VI L + K N
Sbjct: 168 VDSKTADTEEESENLKKFTIDMTSMAREGK-----IDPVIGREEEIRRVIRILSRRTKNN 222
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEE 287
V++GE VV G+ +I DVP L + K L L + S + R E E+R++
Sbjct: 223 PVLIGEPGVGKTTVVEGLARRIVNADVPANLSNCKLLSLDVGSLVAGSKYRGEFEERMKG 282
Query: 288 IKN 290
+ N
Sbjct: 283 VLN 285
>gi|354546061|emb|CCE42790.1| hypothetical protein CPAR2_204330 [Candida parapsilosis]
Length = 896
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 34/288 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA---- 68
T A +++ A L + + Q+ PLH +LAA T + L KA
Sbjct: 7 TDNALRIIQNATNLCKENANTQLVPLH----LLAAFIPTDDTEGTSPYLQTLIQKARYEW 62
Query: 69 --LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
E N L RLP+ P + + +++ Q Q IE QQ+
Sbjct: 63 PVFERTVNKHLVRLPSQNPPP------------DDVRPSYQLGQVLQNAAKIEKQQKDYY 110
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I + L++++L+D S+ + +EAG +K+ +LE+ S S
Sbjct: 111 ---IAQDHLLLALLEDQSIKDIFKEAGIKPDAIKTQ-----ALELRGDQRIDSRQADSSS 162
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ +DP+ R E++ VI L + K N V+VG+ +V
Sbjct: 163 SYEFLNKYCEDFTEKAREGRIDPVIGREEEIRRVIRVLARRSKSNSVLVGDAGVGKTSIV 222
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKN 290
GV +I GDVP L + + L + + + E E+R++ + N
Sbjct: 223 EGVAQRIVDGDVPNVLSNARLFSLDMGALTAGAKYKGEFEERLKGVLN 270
>gi|117923463|ref|YP_864080.1| ATPase [Magnetococcus marinus MC-1]
gi|117607219|gb|ABK42674.1| ATPase AAA-2 domain protein [Magnetococcus marinus MC-1]
Length = 861
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 32/301 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q+ LT+++A + A+ LA R H V P H+ ML G++ A L + PL A
Sbjct: 3 QEQLTSKSAEALNSAVGLAAERNHQFVEPEHLLLAMLEQKDGVI-PALLIKMNTPL--PA 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQ-FPTISNALVAAFKRAQ--AHQRRGSIENQQQPL 125
L+ +VA+ LP GG Q P S L + ++ A+ A R + + L
Sbjct: 60 LQQATSVAVENLPRVHG----GGAAQTLP--SRRLQSLWQDAEREAATLRDDYTSTEHFL 113
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
LA+ E + S+L +++R T+V ++ S + + P + ++ E
Sbjct: 114 LAMTEHKEGALPSLLRPFTITR---------TRVLEALKTVRSGQRVTSKEPEGTFQALE 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A + K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 165 KYARDLTALAKSGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAI 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ ++E+GDVPE+L+ V+ + L + + R E E+R++ + V+ G+ I+
Sbjct: 218 VEGLALRMERGDVPESLKGVRVVALDMGALVAGAKYRGEFEERLKAVIKEVQEAQGKIIL 277
Query: 302 L 302
Sbjct: 278 F 278
>gi|39937493|ref|NP_949769.1| endopeptidase Clp ATP-binding subunit B [Rhodopseudomonas palustris
CGA009]
gi|192293280|ref|YP_001993885.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1]
gi|54035765|sp|Q6N1H2.1|CLPB_RHOPA RecName: Full=Chaperone protein ClpB
gi|39651352|emb|CAE29874.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas
palustris CGA009]
gi|192287029|gb|ACF03410.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1]
Length = 879
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A +LA R GH Q +PLH+ +L S GL ++ + +A+ AL +
Sbjct: 14 IQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN---SRAILKATEEALGK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
+P + + G Q ++ A AF A+ + V +E L +S+
Sbjct: 71 MPKVSGS----GAGQV-YLAPATARAFDAAEKAAEKAGDS-------FVTVERLLLALSL 118
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
D +++ + G + + + + +T ++ + + L+Q A K
Sbjct: 119 DKDSEAGQLLTKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARDGK 178
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R+E++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 179 -------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVP 231
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
E+L+D K L L + + R E E+R++ + N V + G GI+L + ++
Sbjct: 232 ESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEG-GIILFIDEM 282
>gi|419848228|ref|ZP_14371346.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 1-6B]
gi|386408369|gb|EIJ23282.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 1-6B]
Length = 889
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 150/368 (40%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A V A+ A G+AQV LHV + +L G++R+ + +
Sbjct: 1 MEQKFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGD---SQ 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LP+++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L+ K + L + S + R E E+R++ + N +++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 865
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + H Q+ P+H L G+ R ++ +Q AL
Sbjct: 6 LTTKFQQAFQDAQSLALAQDHQQIEPIHFLIAFLDQEGGIARPVLAKAG---VQVDALRN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
+ AL +P P G Q +S L F A + Q+RG I
Sbjct: 63 QLSRALEGMPKVHGQP---GEVQ---VSRDLNNMFNLADKISQKRGD----------SFI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E ++++LDD R+++ AG +S ++EQAV ++ +N ++ L
Sbjct: 107 STEHFLLALLDDKGEAGRLLKAAGATS----KDLEQAVH-DLHGGEKINDANAEEQRQAL 161
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
T + + + LDP+ R++++ I+ L+ + K N V++GE +V G+
Sbjct: 162 EKYTTDYTERARQGK--LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
++ G+VPE+LRD + L L + +
Sbjct: 220 ALRMVNGEVPESLRDKRLLGLDLGAL 245
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 18/197 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E E L + L+ +V Q + V +AN + + R+G R G F
Sbjct: 552 VSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVANAIRRSRAGLSDPRRPNGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 606 ------LFLGPTGVGKTELTKALAEFLFDSEDLLVRIDMSEFMEKHSVARLIGAPPGYVG 659
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 660 YEEGGYL---TEAVRRKPYSVVLLDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 775 IVILSCESFSSRSRACS 791
+++++ S R + S
Sbjct: 717 VIVMTSNLGSDRIQEFS 733
>gi|282857950|ref|ZP_06267153.1| ATP-dependent chaperone protein ClpB [Pyramidobacter piscolens
W5455]
gi|282584209|gb|EFB89574.1| ATP-dependent chaperone protein ClpB [Pyramidobacter piscolens
W5455]
Length = 869
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + +A LA GH +V H+ +L+ GL+ + L+ L
Sbjct: 6 LTQKSQEALSEAQNLAISHGHQEVDVEHLTLALLSQKDGLI-PSILEKLGANAAALGARL 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQ-----FPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
+ L R P T GG+ + +S L A KRAQA L
Sbjct: 65 --DQLLERKPRIT-----GGYDKDRIYLSQNLSKVLTDAEKRAQA-------------LG 104
Query: 127 AVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ +E L +ILD P V++++ E+G + +E + P + ++
Sbjct: 105 DEYVSVEHLFAAILDLPQHPVAKLLAESGVGADAFLKALESVRGGARVQSANPEETYEAL 164
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
+ + L + A + K LDP+ R+++++ VI+ L K K N V++GE
Sbjct: 165 KKYGVDLVEYARSDK-------LDPVIGRDDEILRVIQILSRKTKNNPVLIGEPGVGKTA 217
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+V G+ +I KGDVPE L++ L + S R E E+R++ + N V+ GR I
Sbjct: 218 IVEGLAQRILKGDVPEDLKNRTVFSLDMGSLIAGAKYRGEFEERLKAVINEVKRSEGRVI 277
Query: 301 VL 302
+
Sbjct: 278 LF 279
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E E L L + L K V Q + V +A+ +++ R+G R G F
Sbjct: 554 VTKLMEGEREKLLHLDDELHKGVIGQDEAVSLVADAIMRARAGIKDPRRPIGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LAR +F S +N + I +S + + S
Sbjct: 608 ------IFLGPTGVGKTELAKTLARTLFDSEDNMIRIDMSEYMEKYSVS-----RLLGAP 656
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV + P+ V L +++E+A + ++ GR+ S G V
Sbjct: 657 PGYVGYDEGGQLTEAVRSKPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSHGRTVDFK 716
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 717 NTVIIMTS 724
>gi|399037187|ref|ZP_10734066.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF122]
gi|398065179|gb|EJL56830.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF122]
Length = 867
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ P KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGDP---KAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG+ Q ++ L A+ ++ S ++ L A+ IE
Sbjct: 71 LPKVS-----GGNGQI-YLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIE------ 118
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
S S ++ AG ++ + + EI T SSN E L + A
Sbjct: 119 ---SSASTSTTLKNAGVTALALNQVIN-----EIRKGRTADSSNA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE +V G+ +I GD
Sbjct: 169 LTGEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 229 VPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|304319819|ref|YP_003853462.1| endopeptidase Clp: ATP-binding subunit B, clpB [Parvularcula
bermudensis HTCC2503]
gi|303298722|gb|ADM08321.1| endopeptidase Clp: ATP-binding subunit B, clpB [Parvularcula
bermudensis HTCC2503]
Length = 887
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 31/295 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP-LQCKALEL 71
T A +V+ A T+A R H Q+TP HV +L S GL ++ P L A+
Sbjct: 7 TDRAKGLVQAAQTIAIRENHQQITPFHVLKALLDDSEGLAANLMRRAGGDPDLALTAV-- 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL +LP + G + Q ++ F +A+ ++ +
Sbjct: 65 --DQALAKLPT-----VQGANAQV-YMAQPTARIFTQAEDIAKKAGDSY---------VT 107
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E+L++++ + + +++AG S + + + EI T + N + E L
Sbjct: 108 AERLLVALALEGETAATLKKAGLSPQSLNTAIN-----EIRKGRT--ADNANAEQGYDAL 160
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + LDPI R+E++ ++ L + K N V++GE + G+
Sbjct: 161 KRYARDLTDAAREGKLDPIIGRDEEIRRAMQILSRRTKNNPVLIGEPGVGKTAIAEGLAL 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D + L L + S R E E+R++ + + S G+ I+
Sbjct: 221 RIVNGDVPESLKDKRLLALDLGSLIAGAKYRGEFEERLKAVLSETTSAEGQIILF 275
>gi|315453968|ref|YP_004074238.1| ATPase AAA-2 domain-containing protein [Helicobacter felis ATCC
49179]
gi|315133020|emb|CBY83648.1| ATPase AAA-2 domain protein [Helicobacter felis ATCC 49179]
Length = 608
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 6/193 (3%)
Query: 601 FKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWL 660
+++L+ L +C ALEK+V Q + + +++ +G G K + L
Sbjct: 279 WEDLDKHKLDGICQALEKRVKGQHHAIRKVEKVIIRAFTGF---SGAAHSAKSQKPKWVL 335
Query: 661 FFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSY 720
FF G K ++AK LA +FG + F+ +S F+ ++D +
Sbjct: 336 FFVGPTGVGKTELAKSLAEFLFGDESAFLRFDMSEFNHEQSDQRLVGAPPGYVGHEEGG- 394
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ A+ P V L +++E+A F + +E GR+ G+ S G++++I +
Sbjct: 395 --QLTNAIRAKPFSVILFDEIEKAHERILDKFLQILEDGRLTDGRGETASFGESVIIFTS 452
Query: 781 ESFSSRSRACSPP 793
+S ++ P
Sbjct: 453 NIGASEIKSDGEP 465
>gi|160892139|ref|ZP_02073142.1| hypothetical protein BACUNI_04602 [Bacteroides uniformis ATCC 8492]
gi|317480862|ref|ZP_07939943.1| ATP-dependent chaperone ClpB [Bacteroides sp. 4_1_36]
gi|156858617|gb|EDO52048.1| ATP-dependent chaperone protein ClpB [Bacteroides uniformis ATCC
8492]
gi|316902947|gb|EFV24820.1| ATP-dependent chaperone ClpB [Bacteroides sp. 4_1_36]
Length = 864
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 135/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+HV +++ + + + + L
Sbjct: 6 FTIKAQEAVQEAVNLVQSRGQQAIEPVHVLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + +++ + + E + + + +S E +
Sbjct: 106 LEPVLLALLNVKSTASTILKDAGMTERELREAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|374995806|ref|YP_004971305.1| ATP-dependent chaperone ClpB [Desulfosporosinus orientis DSM 765]
gi|357214172|gb|AET68790.1| ATP-dependent chaperone ClpB [Desulfosporosinus orientis DSM 765]
Length = 866
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + A T+A R G++ V P H+ ++L G++ + + AL
Sbjct: 8 FTQKSQEAIANAQTMAERNGNSLVEPEHLLLSLLEQGEGVVPQVLTKLG---IAVGALIQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NR P + G + Q P + ALVAA H + ++
Sbjct: 65 TIRQEINRFPRIS-----GSNVQMSISPRLRTALVAA------HDEMATFGDEY------ 107
Query: 129 KIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L++ I + + +++R+ G + + + + + + P + + E
Sbjct: 108 -VSTEHLLLGIFEKAGGAADQILRKNGLTRESLLQALREIRGTQRVTSPNPEGTYAALEQ 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + Q A R LDP+ R+E++ VI+ L + K N V++GE +V
Sbjct: 167 YGLNMVQLAQ-------RGRLDPVIGRDEEIRRVIQTLSRRTKNNPVLIGEPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I +GDVPEA++D + + L + +
Sbjct: 220 EGLAQRIVRGDVPEAIKDKQVIALDLGTM 248
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + ++V Q + V +A+ V + R+G R G F
Sbjct: 551 VSKLMESEMQKLIHMEERIHQRVIGQDEAVRAVADAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++++ LA +F V I +S + S
Sbjct: 605 ------LFLGPTGVGKTELSRALAEFLFDDEQAMVRIDMSEYMEKHTVS-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 654 PGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHSDVFNVLLQLLDDGRLTDGQGRNVNFK 713
Query: 773 DAIVILSC 780
+ +VIL+
Sbjct: 714 NTVVILTS 721
>gi|347760901|ref|YP_004868462.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579871|dbj|BAK84092.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 867
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T + ++ A T+A R + Q+TP H+ +L A++ L+R A Q
Sbjct: 6 FTERSRGFLQAAQTIAMRDYNQQLTPEHLLKALLDDEQGAASSLIRAAGGQ-------VP 58
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
A+ AL +LP + G PT ++ LV A QA Q+ G Q LL
Sbjct: 59 AITAANEAALAKLP-----KVQGSGAGQPTATSELVRVLDGAEQAAQKAGDEYVAQDRLL 113
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A I+ + P+ + +R AG ++ Q +E+A++ + V S + E+
Sbjct: 114 AA--------IAASETPA-GQALR-AGGATPQA---LEKAIA--TIRKGRTVDSENA-EA 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
N L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 NFDALKKYARDVTEVALQGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEAL++ K L L + + R E E+R++ + + S G+ I+
Sbjct: 218 EGLAQRIVNGDVPEALKNKKLLSLDMGALVAGAKFRGEFEERLKAVLKEIESAEGQVILF 277
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L K V Q+ + ++N V + R+G R G F
Sbjct: 552 VDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F + I +S F A S
Sbjct: 606 ------LFLGPTGVGKTELCKALARFLFDDEKALLRIDMSEFMEKHAVS-----RLVGAP 654
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSC 780
+ +++L+
Sbjct: 715 NTLIVLTS 722
>gi|270296241|ref|ZP_06202441.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20]
gi|270273645|gb|EFA19507.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20]
Length = 864
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 135/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+HV +++ + + + + L
Sbjct: 6 FTIKAQEAVQEAVNLVQSRGQQAIEPVHVLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + +++ + + E + + + +S E +
Sbjct: 106 LEPVLLALLNVKSTASTILKDAGMTERELREAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|283456829|ref|YP_003361393.1| ATP-dependent chaperone ClpB [Bifidobacterium dentium Bd1]
gi|283103463|gb|ADB10569.1| ATP-dependent chaperone ClpB [Bifidobacterium dentium Bd1]
Length = 878
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LHV + +L G++R +Q+ +Q
Sbjct: 1 MEQKFTTMAQEAIGDAIQSASAAGNAQVDTLHVMDALLRQENGVIR-GLIQAAGGDVQ-- 57
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LPA++ G P S L AA +A E + Q +
Sbjct: 58 AIGAAVRNALVALPAAS-----GSTTSQPQASRQLTAAIAQA---------EKEMQAMGD 103
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 104 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAEALRKAVPGVRGGAKVTSPDAERSYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSTDLTAAAKDGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIK 289
V G+ +I GDVP L++ K + L + S + R E E+R +EEIK
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIK 268
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + L K+V QK+ + +++ V + R+G R G F
Sbjct: 559 VGRLMQGENEKLLHMEEYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 613 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 659
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 660 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 718
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 719 DFKNTILIMTS 729
>gi|423303492|ref|ZP_17281491.1| chaperone ClpB [Bacteroides uniformis CL03T00C23]
gi|423307785|ref|ZP_17285775.1| chaperone ClpB [Bacteroides uniformis CL03T12C37]
gi|392687856|gb|EIY81147.1| chaperone ClpB [Bacteroides uniformis CL03T00C23]
gi|392689654|gb|EIY82931.1| chaperone ClpB [Bacteroides uniformis CL03T12C37]
Length = 864
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 135/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+HV +++ + + + + L
Sbjct: 6 FTIKAQEAVQEAVNLVQSRGQQAIEPVHVLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + +++ + + E + + + +S E +
Sbjct: 106 LEPVLLALLNVKSTASTILKDAGMTERELREAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|125560774|gb|EAZ06222.1| hypothetical protein OsI_28464 [Oryza sativa Indica Group]
Length = 202
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 222 LMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHM-NRVE 280
++ +RN V+VG+ A + V++ I +I P AL K LPL + ++
Sbjct: 1 MLKPTRRNPVLVGD--AGPDAVLKEAIRRIPTAGFP-ALAGAKVLPLEAELAKLAGDKAA 57
Query: 281 VEQRVEEIKNLVRSCLGR--GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLV 338
+ R+ ++ +V LG G+VL+LGDL+W +++ G + + E+G+L+
Sbjct: 58 MAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDGPAAAASEGG-----KAAVAEMGRLL 112
Query: 339 CGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI 379
G A W + A +Y+RCK HP +E W LH + I
Sbjct: 113 RRFGR-AGVWAVCTAACTTYLRCKVYHPGMEAEWDLHAVPI 152
>gi|295112200|emb|CBL28950.1| ATP-dependent chaperone ClpB [Synergistetes bacterium SGP1]
Length = 870
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ S + A LA R H QV H+ +L + GL+ + P K LE
Sbjct: 6 LTTKSQSALAAAQDLAAARSHQQVDVEHLLLALLQDAEGLIPRMLRRMEVDP---KVLEK 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
+ + R+P + + G P +S L AA +RA+A L +
Sbjct: 63 LVSDEVARMPRVSGSGAEPGKVYVTPRLSRLLAAAEERAKA-------------LKDEYV 109
Query: 131 ELEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+E L +++LD+ + + R++ G + + + + + + P E+
Sbjct: 110 SVEHLFLAMLDEGTNTNLGRILNRLGITEDRFLKALTEVRGSQRVQSADP-------EAT 162
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ + LDP+ R+E+V VI L K K N V++G+ +V
Sbjct: 163 YEALAKYGRDLVAAAREGKLDPVIGRDEEVRRVIRILSRKTKNNPVLIGDPGVGKTAIVE 222
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I +GDVPE L+D L + S R E E+R++ + N V+ GR IVL
Sbjct: 223 GLAQRIVRGDVPEGLKDRTVFALDMGSLVAGAKFRGEFEERLKAVLNEVKQSEGR-IVLF 281
Query: 304 LGDL 307
+ +L
Sbjct: 282 IDEL 285
>gi|330465005|ref|YP_004402748.1| ATP-dependent chaperone ClpB [Verrucosispora maris AB-18-032]
gi|328807976|gb|AEB42148.1| ATP-dependent chaperone ClpB [Verrucosispora maris AB-18-032]
Length = 863
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 42/293 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
LT + + A+ LA +RGHA V P H+ ++L + + GLLR + P +
Sbjct: 6 LTTRSRETITGAVALANQRGHATVEPWHLLLSLLDTEGSTAAGLLRAVG----ADPAE-- 59
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L AL+ LPA+ G PT++ V A G+ E +PL
Sbjct: 60 -LRRVTQRALDALPAAR-----GSSIAEPTLAREFVNAI---------GAAEQIARPLGD 104
Query: 128 VKIELEQLIISILD-DPSVSRVMREAGFSS-TQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
E L+ + +VS ++ AG + T V + + + + P + ++
Sbjct: 105 EYTSTEHLLAGLARVGGAVSGALKAAGATEETLVAAFPKVRGGDRRVTSADPEQTYQALA 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ +A K+ DP+ R+ ++ VI+ L + K N V++GE +
Sbjct: 165 KYGVDLTASARDGKI-------DPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAI 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSI------SSFRHMNRVEVEQRVEEIKN 290
V G+ +I GDVPE+LRD K + L + +S+R ++ +EEIKN
Sbjct: 218 VEGLAQRIVAGDVPESLRDKKLVSLDLGAMVAGASYRGQFEERLKSVLEEIKN 270
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 22/207 (10%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
+ E + L + ++L ++V Q + V +++ V + R+G R G F
Sbjct: 555 RLLEGETAKLLRMEDSLRERVVGQAEAVGAVSDAVRRARAGVADPDRPTGSF-------- 606
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K ++AK LA +F V I +S + + +
Sbjct: 607 ----LFLGPTGVGKTELAKALAGFLFDDERAMVRIDMSEYGEKHSVA-----RLVGAPPG 657
Query: 717 SCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y E + EAV P+ V L+++VE+A + ++ GR+ G V +A
Sbjct: 658 YVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNA 717
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGC 801
I+IL+ SS + +Q+ +G
Sbjct: 718 ILILTSNLGSSVISDLTLAEEQRREGV 744
>gi|221056062|ref|XP_002259169.1| heat shock protein 101 [Plasmodium knowlesi strain H]
gi|193809240|emb|CAQ39942.1| heat shock protein 101, putative [Plasmodium knowlesi strain H]
Length = 906
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 34/281 (12%)
Query: 18 SVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVAL 77
+++ +A+R GH+Q+ P+H+ + + + G + L+ +S + L+ + AL
Sbjct: 43 NILNAGKNIAKRYGHSQLKPVHILSALAKSDYG---SNLLKENS--VNASNLKQYLDTAL 97
Query: 78 NRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLII 137
+ A P + N A+ Q + E + K+++E L+
Sbjct: 98 EQTRAG------------PPLDNKSKIAYS-DQVKEVLAEAEALANKYKSQKVDVEHLLS 144
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
+++D V+ ++ E + VK ++ S+ +K +S L L Q S
Sbjct: 145 GLMNDELVNEILNEVYLTDEAVKGILK--------SKLEKTKKDKDGKSGGLYLEQFGSN 196
Query: 198 T--KVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
KV ++ R+E++ VIE+L+ K + V+VG+ +V G++ +IEKGD
Sbjct: 197 LNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGD 256
Query: 256 VPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
VP+ LR + L+ F R E E R ++E+KN
Sbjct: 257 VPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKN 297
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGV 665
S+ L N+L K + +D + +++ V+K +G KD E T+LF G
Sbjct: 589 SKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATG-------MKD-PEKPIGTFLFL-GP 639
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--- 722
K ++AK LA +F S +N + + +S F+ + S Y+
Sbjct: 640 TGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITG--------SPPGYVGFSD 691
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+ EAV PH V L +++E+A K + + G I + + + I+I++
Sbjct: 692 SGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSNTIIIMT 750
>gi|111225976|ref|YP_716770.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111153508|emb|CAJ65266.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 872
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 45/365 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + + A++ A G V PLH+ +L A G+ A L S S A+
Sbjct: 6 LTARSQEALSAAISRATGDGSPLVDPLHLLTALLEAPDGV--GAALLS-STGTSVDAVRG 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A++RLP +T G P +S L+A A E Q L
Sbjct: 63 RAEAAVSRLPRAT-----GMSVSAPQLSRQLLAVLDNA---------ERQAGRLGDEYTS 108
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQ--AVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ R++ AG S ++ ++ + + S+ P S ++ E
Sbjct: 109 VEHLVVALAEEGGEAGRILTTAGASPDALRGAFDKVRGGARRVTSRD-PEGSYRALEKYS 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R+ ++ VI+ L + K N V++GE +V G
Sbjct: 168 IDLTERAQQGK-------LDPVIGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ ++ GDVPE+LR + + L + S + R E E+R+ + N +R G+ I+ +
Sbjct: 221 LALRVVAGDVPESLRGRRIVSLDLGSMVAGSKLRGEFEERLTSVLNEIREAEGQ-IITFI 279
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A +E M+ G ++ + ++G T + Y
Sbjct: 280 DELHTV-VGAGGAEGA-----------MDAGNMLKPMLARGELRMIGATTLEEYRTRIEK 327
Query: 365 HPSLE 369
P+LE
Sbjct: 328 DPALE 332
>gi|302344661|ref|YP_003809190.1| ATP-dependent chaperone ClpB [Desulfarculus baarsii DSM 2075]
gi|301641274|gb|ADK86596.1| ATP-dependent chaperone ClpB [Desulfarculus baarsii DSM 2075]
Length = 861
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 125/298 (41%), Gaps = 35/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTAC--LQSHSHPLQCKAL 69
T ++ ++++A++L +RGH QV P H+ L S + + L LQ +A
Sbjct: 6 FTVKSQEIIQEAVSLTDKRGHPQVEPAHLLAATLKISQEIAKPVLGKLGVAEAGLQAEAE 65
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L L R P + GG + S L+ Q + + E ++V
Sbjct: 66 AL-----LQRQPQVSG----GGQAYLSSASRELL--------QQAQNAAEQMHDDYVSV- 107
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
E L++++ + V ++R AG + + ++ + + P E
Sbjct: 108 ---EHLLVALAAEKGPVGELLRRAGAGPEAILAVLKDIRGSQRVTDQNP-------EDKY 157
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L Q A S R LDP+ R+E++ V++ L + K N V++GE +V G
Sbjct: 158 QALQQYAQDLTDSARRGKLDPVIGRDEEIRRVVQILSRRTKNNPVLIGEPGVGKTAIVEG 217
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVPE L+D + + L + + R E E R++ + V G+ I+
Sbjct: 218 LAQRIVAGDVPEGLKDKRVVSLDMGALIAGAKYRGEFEDRLKAVLKEVTEAAGQIILF 275
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 100/260 (38%), Gaps = 33/260 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + K+V QKD V +AN V + RSG R G F
Sbjct: 551 VARLMEGEREKLLHMEERIAKRVVGQKDAVEAVANAVRRARSGLQDPNRPVGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F + + +S F + S
Sbjct: 605 ------IFMGPTGVGKTELARALAEFMFDDEQAMIRLDMSEFMEKHSVSRLIGAPPGYVG 658
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y+ EAV P+ V L +++E+A + ++ GR+ G V +A
Sbjct: 659 YDEGGYL---TEAVRRKPYSVVLFDEIEKAHPDVFNALLQILDDGRLTDGQGRTVDFTNA 715
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSI 834
I+I++ S + + P +++ EE A+ L+ +
Sbjct: 716 IIIMTSNIGSQYIQDLAGPHQRQR--MEEAVMTALRAQFKPEFLN-------------RV 760
Query: 835 DDIGLLESVDKRIIFKIMEL 854
D++ + S+DK I I+EL
Sbjct: 761 DNVVIFHSLDKEHIAHIVEL 780
>gi|329961410|ref|ZP_08299533.1| ATP-dependent chaperone protein ClpB [Bacteroides fluxus YIT 12057]
gi|328531887|gb|EGF58710.1| ATP-dependent chaperone protein ClpB [Bacteroides fluxus YIT 12057]
Length = 864
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 135/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+HV +++ + + + + L
Sbjct: 6 FTIKAQEAVQEAVNLVQGRGQQAIEPVHVLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + +++ + + E + + + +S E +
Sbjct: 106 LEPVLLALLNVKSTASTILKDAGMTERELREAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|316935949|ref|YP_004110931.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris DX-1]
gi|315603663|gb|ADU46198.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris DX-1]
Length = 879
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T ++ A +LA R GH Q +PLH+ +L S GL ++ + +A+
Sbjct: 7 TERVRGFIQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL ++P + + G Q + A AF A+ + V +E
Sbjct: 64 TEDALGKMPKVSGS----GAGQV-YLDPATARAFDAAEKAAEKAGDS-------FVTVER 111
Query: 133 EQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLS 192
L +S+ D +++ + G + + + + +T ++ + + L+
Sbjct: 112 LLLALSLDKDSEAGKLLAKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLT 171
Query: 193 QTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDK 250
Q A K LDP+ R+E++ I+ L + K N V++GE +V G+ +
Sbjct: 172 QAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALR 224
Query: 251 IEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
I GDVPE+L+D K L L + + R E E+R++ + N V + G GI+L + ++
Sbjct: 225 ILNGDVPESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTTAEG-GIILFIDEM 282
>gi|427428354|ref|ZP_18918395.1| ClpB protein [Caenispirillum salinarum AK4]
gi|425882087|gb|EKV30769.1| ClpB protein [Caenispirillum salinarum AK4]
Length = 868
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 33/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A T+A R+ H QVTP H+ +L GL + + P KALE
Sbjct: 6 FTDRSKGFIQAAQTIALRQNHQQVTPEHLLKALLDDKEGLAANLLRSAGADP--VKALE- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A++++P M + A AA K ++ +
Sbjct: 63 AVTAAVDKMPKVEGAQMYVAQELGRVLDQATQAAEKAGDSY-----------------VT 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++++ + RV+++AG ++ ++ +++ + + + S E
Sbjct: 106 AEYMLLALATSGTQAGRVLKDAGLTADKLNGAIKEM-------RQGRTAQSASAEDQYDA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A + LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 159 LKKYARDLTEAAREGKLDPVVGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
++ GDVPE+L++ + L L + + R E E+R++ + + + GR IVL + +
Sbjct: 219 LRMVNGDVPESLQNKRLLALDLGAMVAGAKFRGEFEERLKAVLEEITAAEGR-IVLFIDE 277
Query: 307 L 307
+
Sbjct: 278 M 278
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQ 663
E L + + L+++V Q++ V ++N + + R+G R G F F
Sbjct: 560 EKLLRMEDNLQRRVVGQREAVVAVSNAIRRSRAGISDPNRPMGSF------------LFL 607
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE- 722
G K ++ K LA +F V I +S F A + Y E
Sbjct: 608 GPTGVGKTELTKALAEFLFDDETAMVRIDMSEFMEKHAVA-----RLIGAPPGYVGYEEG 662
Query: 723 -RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
EAV P++V L ++VE+A + ++ GR+ G V + +++++
Sbjct: 663 GSLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTS 721
>gi|328542101|ref|YP_004302210.1| ATPase AAA [Polymorphum gilvum SL003B-26A1]
gi|326411850|gb|ADZ68913.1| ATPase, AAA family [Polymorphum gilvum SL003B-26A1]
Length = 865
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 32/301 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A T A RGH Q P HV +L GL A L + +AL
Sbjct: 7 TERARGFIQSAQTHALGRGHQQFAPEHVLKVLLDDPEGL--AAGLIERAGGRAREALAEV 64
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
V L+++P T GG Q ++ A+ F + + A + S ++ LLA+ +
Sbjct: 65 ERV-LDKMPKVT-----GGSGQL-YMAPAMARFFDQVEKLAEKAGDSFVTVERMLLALAM 117
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ D +++ AG + T + V ++ S + +
Sbjct: 118 D---------GDSDAGKLLARAGVTPTALNQAVNSLRKGRTADSASAESQYDALKKYARD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 169 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+L+D + L L + + R E E+R++ I + V+S G G+VL + +
Sbjct: 222 LRIVNGDVPESLKDKQLLALDMGALIAGAKYRGEFEERLKAILSEVQSAAG-GVVLFIDE 280
Query: 307 L 307
+
Sbjct: 281 M 281
>gi|342879090|gb|EGU80364.1| hypothetical protein FOXB_09112 [Fusarium oxysporum Fo5176]
Length = 924
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T A V+ AM LA + GH+Q+ P+H+A ++L ++ L R
Sbjct: 7 FTDRAQKAVEDAMALAEQYGHSQLAPVHLAVSLLDPPPDPSKDQQNGPPPTSTLFRQVVE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRG 116
++H P + + L RLP+ P H P N L A + + +
Sbjct: 67 RAHGDP---QLFDRALKKTLVRLPSQDPPP---EHVSLAPQFHNVLRKAMELQKVQK--- 117
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
I ++ LI ++ +D ++ ++EA ++ V++AV ++
Sbjct: 118 ----------DTYIGVDHLITALSEDSTIQGPLKEANIPKPKL---VQEAVQAIRGTKRV 164
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E N + T T++++ + +DP+ R E++ V+ L + K N V++G
Sbjct: 165 DSKTADTEEENENLAKFTIDMTEMAREK-KIDPVIGREEEIRRVVRILSRRTKNNPVLIG 223
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E V+ G+ +I DVP+ L+ K L L + +
Sbjct: 224 EPGVGKTTVIEGLAQRIVNRDVPDNLKSCKLLSLDVGAL 262
>gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding chain - Arabidopsis thaliana
Length = 831
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 67/298 (22%)
Query: 17 ASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVA 76
AS AM+L+ H QVTPLH+ T+++ T + A + + +++ N +
Sbjct: 15 ASARSHAMSLS----HGQVTPLHLGVTLISDLTSVFYRAITSAGDGDISAQSVVNVINQS 70
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L +L ++ L K+ + L+
Sbjct: 71 LYKL----------------------------------------TKRNLGDTKVGVAVLV 90
Query: 137 ISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
IS+L+D +S V++EAG +VKS VE+ V++ +
Sbjct: 91 ISLLEDSQISDVLKEAGVVPEKVKSEVEKL------------------RGEVILRALKTY 132
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
T + + LDP+ R+ ++ VIE L + K N V++GE VV G+ +I KG
Sbjct: 133 GTDLVEQAGKLDPVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKG 192
Query: 255 DVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWA 310
DVP L VK + L + R + E+R++ + V G+ +VL + ++ A
Sbjct: 193 DVPINLTGVKLISLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGK-VVLFIDEIHMA 249
>gi|171742044|ref|ZP_02917851.1| hypothetical protein BIFDEN_01148 [Bifidobacterium dentium ATCC
27678]
gi|171277658|gb|EDT45319.1| ATP-dependent chaperone protein ClpB [Bifidobacterium dentium ATCC
27678]
Length = 917
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LHV + +L G++R +Q+ +Q
Sbjct: 40 MEQKFTTMAQEAIGDAIQSASAAGNAQVDTLHVMDALLRQENGVIR-GLIQAAGGDVQ-- 96
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ AL LPA++ G P S L AA +A E + Q +
Sbjct: 97 AIGAAVRNALVALPAAS-----GSTTSQPQASRQLTAAIAQA---------EKEMQAMGD 142
Query: 128 VKIELEQLIISIL-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I I P+ S ++ + G ++ ++ V + S K+ E
Sbjct: 143 EYVSTEHLLIGIAASKPNQSAEILEKNGVTAEALRKAVPGVRGGAKVTSPDAERSYKALE 202
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 203 KYSTDLTAAAKDGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 255
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIK 289
V G+ +I GDVP L++ K + L + S + R E E+R +EEIK
Sbjct: 256 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIK 307
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + L K+V QK+ + +++ V + R+G R G F
Sbjct: 598 VGRLMQGENEKLLHMEEYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 651
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 652 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 698
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 699 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 757
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 758 DFKNTILIMTS 768
>gi|254380625|ref|ZP_04995991.1| chaperone protein clpB [Streptomyces sp. Mg1]
gi|194339536|gb|EDX20502.1| chaperone protein clpB [Streptomyces sp. Mg1]
Length = 879
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 34/305 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A T A R GH +V H+ +L GL+ Q+ P K L
Sbjct: 6 LTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLEQAGKEP---KGLRE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L+R P T G F T +++ L AA E + + L
Sbjct: 63 AVREELSRRPKVTGPGAAPGQV-FVTQRLAHLLDAA-------------EREAKRLKDEY 108
Query: 130 IELEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ +E L++++ ++ S R++++AG + S + Q + + + P + ++ E
Sbjct: 109 VSVEHLLLALAEESSSTAAGRLLKQAGITRDSFLSALTQVRGNQRVTSANPEVAYEALEK 168
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A + + LDP+ R+ ++ V + L K K N V++G+ +V
Sbjct: 169 YGRDLVLEARSGR-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR I+L
Sbjct: 222 EGLAQRIVRGDVPEGLRDRTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGR-ILL 280
Query: 303 NLGDL 307
+ +L
Sbjct: 281 FVDEL 285
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V + + +++ RSG R G F
Sbjct: 556 VARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LAR +F S N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQE---------RHTVSRL 654
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ Y E + EAV P+ V L +++E+A + ++ GRI + G
Sbjct: 655 MGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|68479395|ref|XP_716229.1| hypothetical protein CaO19.6389 [Candida albicans SC5314]
gi|46437891|gb|EAK97230.1| hypothetical protein CaO19.6389 [Candida albicans SC5314]
Length = 355
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 138/341 (40%), Gaps = 63/341 (18%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-----ASTGLLRTACLQSHSHPLQC 66
T A ++ A LA+++ ++Q+ PLH + ST L+T ++ +
Sbjct: 4 FTDNAIKIINNATELAKQQANSQLLPLHFLAAFIPSDDTEGSTQYLKTLVKRAR---YEW 60
Query: 67 KALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
E N L ++P+ P + + +++ Q + I+ QQ+
Sbjct: 61 GDFERIVNRHLVKIPSQNPPP------------DEIRPSYQAGQVLTKANKIKQQQKDSY 108
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ + +++++L+D S+ + +EAG S +K+ QA+ L S + S ++ S
Sbjct: 109 VAQ---DHILLALLEDQSIKDIFKEAGMSVDTIKT---QAIELR---GSQRIDSRQADSS 159
Query: 187 NVLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ K R +DP+ R E++ VI L + K N V++G+ +
Sbjct: 160 SSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLIGDAGVGKTSI 219
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR----------------- 284
V GV +I GDVP L + L + + + E E+R
Sbjct: 220 VEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNEIEKSKEFIIL 279
Query: 285 -VEEI-----------KNLVRSCLGRGIVLNLGDLEWAEFR 313
++EI NL++ L RG + +G +AE+R
Sbjct: 280 FIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 320
>gi|114799774|ref|YP_759360.1| ATP-dependent chaperone protein ClpB [Hyphomonas neptunium ATCC
15444]
gi|114739948|gb|ABI78073.1| ATP-dependent chaperone protein ClpB [Hyphomonas neptunium ATCC
15444]
Length = 872
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP-LQCKALEL 71
T A ++++ A T A GH +TP H+ T+L L + P L + +
Sbjct: 7 TERARAIIQGAQTAALAAGHQVLTPAHILKTLLDDRDQLAVNLIRATGGRPELAVQGV-- 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVK 129
+ AL R+P + G + A F+ A+A ++ + ++ LLA
Sbjct: 65 --DAALGRVPKVS-----GAGAGGLRLEQAGAKLFQDAEAGAKKAGDAFVTAERLLLA-- 115
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
I + DP+ V++ AG + ++ + Q Q S ++E
Sbjct: 116 ------IAGLSGDPAAD-VLKNAGVTPKTLEGAIAQ------LRQGRTADSQNAEEGYEA 162
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
+ TK ++ LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 163 LKKYARDLTKDAR-EGKLDPVIGRDEEIRRAIQVLSRRSKNNPVLIGEPGVGKTAIAEGL 221
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K L L + + R E E+R++ + N V+ G GI+L
Sbjct: 222 ALRIVNGDVPESLKDKKLLALDMGALIAGAKFRGEFEERLKAVLNEVQQADG-GIIL 277
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + ++L +V Q+D + ++N V + R+G R G F
Sbjct: 550 VDKMMEGEREKLLRMEDSLRGRVVGQEDALLAVSNAVRRARAGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR--ADSTEDSRNKRS 712
F G K ++ K LA +F + + +S FS A
Sbjct: 604 ------LFVGPTGVGKTELTKALAEFMFDDDTAILRLDMSEFSEKHSVARLIGAPPGYVG 657
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE E+V P++V L ++VE+A + ++ GR+ G V
Sbjct: 658 YDEGGV-----LTESVRRRPYQVVLFDEVEKAHPDLFNTLLQVLDDGRLTDGQGRTVDFK 712
Query: 773 DAIVILSC 780
+ I+I++
Sbjct: 713 NTIIIMTS 720
>gi|374612446|ref|ZP_09685224.1| ATP-dependent chaperone ClpB [Mycobacterium tusciae JS617]
gi|373547610|gb|EHP74331.1| ATP-dependent chaperone ClpB [Mycobacterium tusciae JS617]
Length = 848
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 152/809 (18%), Positives = 286/809 (35%), Gaps = 136/809 (16%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + + + A+ A G+ Q+TP H+ +L + G+ P +A
Sbjct: 7 TTKTQAALTSALQAATAAGNPQITPAHLLMALLTQNDGIAAPLLEAVGVEPATIRAETQR 66
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
L+RLP+++ G P ++ + A A N + +
Sbjct: 67 L---LDRLPSAS------GSSSQPQLAPQSITAITTAT---------NLATEMDDEYVST 108
Query: 133 EQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L++ + D V++++ G S ++ + + P ++ ++ E L
Sbjct: 109 EHLLVGLATGDSDVAKLLTNHGASPEALRDAFTKVRGSARVTNPDPEATYQALEKYSTDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A K LDP+ R+ ++ V++ L + K N V++GE +V G+
Sbjct: 169 TARAREGK-------LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+LRD + L + S R E E+R++ + + +++ G+ I+ + +L
Sbjct: 222 RIVAGDVPESLRDKTVVSLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQ-IITFIDEL 280
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR------- 360
++ E M+ G ++ + ++G T Y +
Sbjct: 281 HTIVGAGATGEGA-----------MDAGNMIKPMLARGELRMVGATTLDEYRKYIEKDAA 329
Query: 361 -------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSK 402
G PS+E + H + I +L + +D + S+
Sbjct: 330 LERRFQQVLVGEPSVEDTVGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITSRFLPD 389
Query: 403 KA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCN-SDSPTSSLPAWL 457
KA + S L E + ++ + E E +L + S L A L
Sbjct: 390 KAIDLVDEAASRLRMEIDSRPVEVDEVERLVRRLEIEEMALAKEEDDASKDRLVKLRAEL 449
Query: 458 QQYKNEKKATLSNN-DKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGF 516
YK EK A L+ + G D+ + + + + +ER + AS
Sbjct: 450 ADYK-EKLAELTTRWQNEKGAIDIVRDLKEQLDRLRGEADRAERDGDLAKAS-------- 500
Query: 517 SYDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPL 576
+ +Y + + P RE+ L D S IP + L+
Sbjct: 501 --ELRYGRIPEVEKKLDAALPVAEARENVMLKEEVGPDDIADVVSAWTGIPAGRMLE--- 555
Query: 577 SSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLK 636
++ ++ ME L K+V QK V +++ V +
Sbjct: 556 ----------GETAKLLRME-----------------GELGKRVVGQKQAVQAVSDAVRR 588
Query: 637 CRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIAL 693
R+G R G F F G K ++AK LA +F + I +
Sbjct: 589 SRAGVADPNRPTGSF------------MFLGPTGVGKTELAKALAEFLFDDERAMIRIDM 636
Query: 694 SSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKG 751
S + + + Y + + EAV P+ V L +++E+A
Sbjct: 637 SEYGEKHSVA-----RLVGAPPGYVGYDQGGQLTEAVRRRPYSVILFDEIEKAHPDVFDV 691
Query: 752 FKRAIESGRIVTSSGDEVSLGDAIVILSC 780
++ GR+ G V + I+IL+
Sbjct: 692 LLAVLDEGRLTDGQGRTVDFRNTILILTS 720
>gi|170692320|ref|ZP_02883483.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
gi|170142750|gb|EDT10915.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
Length = 865
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP T G+ Q I L +A + + Q L I
Sbjct: 63 ALDDAITRLPQVQGTD---GNVQ---IGRELTGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ R+ G S ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGRIARQHGLSRKSLESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|407721675|ref|YP_006841337.1| chaperone protein ClpB [Sinorhizobium meliloti Rm41]
gi|407319907|emb|CCM68511.1| Chaperone protein ClpB [Sinorhizobium meliloti Rm41]
Length = 868
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ + + K + AL +
Sbjct: 14 LQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAK---VGTAAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP T GG+ +S L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVT-----GGNGSV-YLSQPLAKVFTTAEDAAKKAGDSFVTVERLLLALAIESSAATA 124
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
SIL +AG + T++ + EI T S+N E L + A
Sbjct: 125 SILS---------KAGVTPTKLNQVIN-----EIRKGRTADSANA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D + + L + + R E E+R++ + N VRS G I+
Sbjct: 229 VPESLKDKRLMALDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILF 277
>gi|384530490|ref|YP_005714578.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti BL225C]
gi|333812666|gb|AEG05335.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti BL225C]
Length = 868
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ + + K + AL +
Sbjct: 14 LQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAK---VGTAAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP T GG+ +S L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVT-----GGNGSV-YLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATA 124
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
SIL +AG + T++ + EI T S+N E L + A
Sbjct: 125 SILS---------KAGVTPTKLNQVIN-----EIRKGRTADSANA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D + + L + + R E E+R++ + N VRS G I+
Sbjct: 229 VPESLKDKRLMALDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILF 277
>gi|254500302|ref|ZP_05112453.1| ATPase, AAA family [Labrenzia alexandrii DFL-11]
gi|222436373|gb|EEE43052.1| ATPase, AAA family [Labrenzia alexandrii DFL-11]
Length = 865
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 32/296 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A T A RGH Q TP HV +L G+ + L S + KAL+
Sbjct: 7 TERARGFVQSAQTFALGRGHQQFTPEHVLKVLLDDPEGM--ASGLISRAGG-DAKALKGD 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
L+++P + GG Q + A F +A+ A + S ++ LLA+ +
Sbjct: 64 LEGILDKMPKVS-----GGTGQL-YMHQATARLFDQAEKIADKAGDSFVTVERLLLALAM 117
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ D ++ + G + + V Q +T + ++ +
Sbjct: 118 DA---------DSEAGKLFKRHGITPNALNEAVNQLRQGRTADSATAENQYEALKKYARD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R+E++ ++ L + K N V++GE + G+
Sbjct: 169 LTEVARDGK-------LDPVIGRDEEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D + L L + + R E E+R++ + + V + G GIVL
Sbjct: 222 LRIVNGDVPESLKDKQLLALDMGALIAGAKYRGEFEERLKSVLSEVEAAAG-GIVL 276
>gi|294672907|ref|YP_003573523.1| ATP-dependent chaperone protein ClpB [Prevotella ruminicola 23]
gi|294473088|gb|ADE82477.1| ATP-dependent chaperone protein ClpB [Prevotella ruminicola 23]
Length = 836
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 135/298 (45%), Gaps = 35/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++QA+ A+ G + P+H+ ++ + + T Q + + +EL
Sbjct: 6 FTIKAQEAIQQAVNAAQMNGQQVIEPVHILKGVIEKAKDVT-TFIFQKLG--VNAQQIEL 62
Query: 72 CFNVALNRLPA--STSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
+ + LP P L +N LV RAQ ++G E
Sbjct: 63 LVDQEIQHLPKVQGAGQPYLSSDS-----NNVLV----RAQEVAQKGGDEF--------- 104
Query: 130 IELEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+ +E +++++L + + SR+M++AG + +++ +++ Q V S +S + N
Sbjct: 105 VSVEPILLALLKVNSTASRIMKDAGCTEKDMQAAIQE------LRQGQKVQS-QSADDNY 157
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A + LDP+ R++++ V++ L + K N +++GE +V G
Sbjct: 158 QSLEKYAKNLVDLARQGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEG 217
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+ +I +GDVPE L+D + L + + + E E+R++ + N V GR I+
Sbjct: 218 LAGRIVRGDVPENLKDKQLYSLDMGALVAGAKYKGEFEERLKSVINEVTKAEGRIILF 275
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 16/198 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L L N L K+V Q + + +++ V + R+G K
Sbjct: 547 VTKMMQSEREKLLHLENELHKRVIGQDEAIIAVSDAVRRSRAGLQDPKRPI--------- 597
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LA +F I +S + + S
Sbjct: 598 ASFIFLGTTGVGKTELAKTLADYLFNDETMMTRIDMSEYQEKYSVS-----RLIGAPPGY 652
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ V L +++E+A + ++ GR+ + G + + I
Sbjct: 653 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTANFKNTI 712
Query: 776 VILSCESFSSRSRACSPP 793
+I++ + + RA P
Sbjct: 713 IIMTSNATREQLRATMRP 730
>gi|186475703|ref|YP_001857173.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
gi|184192162|gb|ACC70127.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
Length = 865
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+H+ ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHLLAALVAQQDGSARSLLARAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLP T G+ Q I L +A + + Q L I
Sbjct: 63 ALNDAITRLPQVQGTD---GNVQ---IGRDLTGLLNQA---------DKEAQKLNDTYIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES---N 187
E ++++ DD R+ RE G S +++ + V++ +Q + +E+
Sbjct: 108 SEMFLLAVADDKGEAGRLAREHGLSRKSLEAAI---VAVRGGAQVHSQDAESQREALKKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 165 TIDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 218 GLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|15966361|ref|NP_386714.1| ATP-dependent protease [Sinorhizobium meliloti 1021]
gi|334317365|ref|YP_004549984.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti AK83]
gi|384537190|ref|YP_005721275.1| ATP-dependent protease [Sinorhizobium meliloti SM11]
gi|433614428|ref|YP_007191226.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti GR4]
gi|54035884|sp|Q92MK7.1|CLPB_RHIME RecName: Full=Chaperone protein ClpB
gi|15075632|emb|CAC47187.1| Probable ATP-dependent protease (heat shock protein) [Sinorhizobium
meliloti 1021]
gi|334096359|gb|AEG54370.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti AK83]
gi|336034082|gb|AEH80014.1| ATP-dependent protease [Sinorhizobium meliloti SM11]
gi|429552618|gb|AGA07627.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti GR4]
Length = 868
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ + + K + AL +
Sbjct: 14 LQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAK---VGTAAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP T GG+ +S L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVT-----GGNGSV-YLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATA 124
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
SIL +AG + T++ + EI T S+N E L + A
Sbjct: 125 SILS---------KAGVTPTKLNQVIN-----EIRKGRTADSANA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D + + L + + R E E+R++ + N VRS G I+
Sbjct: 229 VPESLKDKRLMALDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILF 277
>gi|400601605|gb|EJP69248.1| heat shock protein HSP98 [Beauveria bassiana ARSEF 2860]
Length = 923
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 39/285 (13%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTG 50
T + T A V+ AM+LA + H+Q+ P+H+A ++L A
Sbjct: 1 MTARMDFTDRAQKAVEDAMSLAEQYAHSQLVPVHLAVSLLEPPIDQSKDQQNAPPGAIVT 60
Query: 51 LLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
L R ++H + + L RLP+ P + ++S A ++A
Sbjct: 61 LFRQVIERAHG---DSQLFDRALKKLLVRLPSQDPPP------EQVSLSPQFHAVLRKAM 111
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
Q+ Q+ + V + LI ++ D+PS+ ++EA ++ + QA+
Sbjct: 112 ELQK-----VQKDTYIGV----DHLITALADEPSIQAALKEANIPKPKLVQDAVQAIR-- 160
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKR 228
++ + +++ N + T T +++ + +DP+ R E++ VI L + K
Sbjct: 161 -GTKRVDSKTADTEQENENLAKFTIDLTALARDK-KVDPVIGREEEIRRVIRILSRRTKN 218
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
N V++GE VV G+ +I DVP+ L++ K L L + +
Sbjct: 219 NPVLIGEPGVGKTTVVEGLAQRIVIRDVPDNLKNCKLLSLDVGAL 263
>gi|415721679|ref|ZP_11468612.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
gi|388060384|gb|EIK83076.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
Length = 864
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMREMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ SV+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNSVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDILLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|373252760|ref|ZP_09540878.1| chaperone ClpB [Nesterenkonia sp. F]
Length = 880
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
LT ++ V A A G+ QV P H+ ++ + + LL+ A + +
Sbjct: 5 LTTKSQEAVSAAAMNANTAGNPQVEPAHILKALMDQRESVAVALLKAAGADPDAVSTRAS 64
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A A+ +LP+S+ G P S A + K AQA + Q +
Sbjct: 65 A-------AIQQLPSSS-----GDAVSSPQFSQAGLTVVKAAQA---------EAQQMGD 103
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+I + D R + EAG ++ +K+ + + P + +S E
Sbjct: 104 DYVSTEHLLIGVAADTGPAGRALAEAGATAEALKAELPGLRGDRRVTSPDPEGTFQSLEK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L++ A + + LDP+ R+ ++ V++ L + K N V++GE VV
Sbjct: 164 YGTDLTEIARSGQ-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQR----VEEIKN 290
G+ +I GDVPE+LR+ + L +S+ R E E+R +EEIKN
Sbjct: 217 EGLAQRIVAGDVPESLREKTLIALDLSAMIAGAKYRGEFEERMQAVLEEIKN 268
>gi|358379391|gb|EHK17071.1| hypothetical protein TRIVIDRAFT_216898 [Trichoderma virens Gv29-8]
Length = 923
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTG 50
T + T A ++ AM++A + GH+Q+ P+H+A ++L +
Sbjct: 1 MTSRMDFTDRAQKAIEDAMSMAEQYGHSQLLPVHLAVSLLEPPVDQSKDQQNGPQQTTVT 60
Query: 51 LLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
L R A ++H P + L+ L RLP+ P ++S + A ++AQ
Sbjct: 61 LFRQAVERAHGDP---QLLDRALKKTLVRLPSQDPPP------DQVSLSPSFHAVLRKAQ 111
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
Q+ Q+ +AV + LI ++ +D + ++E ++ +++AV+
Sbjct: 112 DLQK-----VQKDTFIAV----DHLITALSEDVGIQACLKEGNIPKPKL---LQEAVTAI 159
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKR 228
++ + +++ N + T T +++ + +DP+ R E++ V+ L + K
Sbjct: 160 RGTRRVDSKNADTEQENENLAKFTIDMTALARDK-KIDPVIGREEEIRRVVRILSRRTKN 218
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
N V++GE VV G+ +I DVP+ L+ K L L + +
Sbjct: 219 NPVLIGEPGVGKTTVVEGLAQRIVNRDVPDNLKACKLLSLDVGAL 263
>gi|418403509|ref|ZP_12976997.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti CCNWSX0020]
gi|359502569|gb|EHK75143.1| ATP-dependent chaperone ClpB [Sinorhizobium meliloti CCNWSX0020]
Length = 868
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ + + K + AL +
Sbjct: 14 LQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAK---VGTAAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP T GG+ +S L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVT-----GGNGSV-YLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATA 124
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
SIL +AG + T++ + EI T S+N E L + A
Sbjct: 125 SILS---------KAGVTPTKLNQVIN-----EIRKGRTADSANA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D + + L + + R E E+R++ + N VRS G I+
Sbjct: 229 VPESLKDKRLMALDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILF 277
>gi|406914738|gb|EKD53889.1| hypothetical protein ACD_60C00143G0031 [uncultured bacterium]
Length = 862
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + + A +LA R HA + P HV +L G +R +++++ L
Sbjct: 6 LTSKFQAALADAQSLAVGRDHAFIEPSHVMKALLDQEGGSIRPILTKANTN---IAVLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP P G N L+ + A +R+ + + LLA
Sbjct: 63 ELDAAIQRLPQVEGAP---GEVHVSNDLNRLLNVTDKL-AQKRKDQYISSELFLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST--PVSSNKSKESNVL 189
+I D + ++R+AG VK +E+A+ E Q+ P + ++ +
Sbjct: 115 ------AIEDTGVLGEMLRKAG----AVKQAIEKAIDEERKGQTVQDPNAEDQRRALEKY 164
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
+ TA A + LDP+ R+ ++ I+ L+ + K N V++GE +V G+
Sbjct: 165 TIDLTARAEQGK-----LDPVIGRDAEIRRTIQVLLRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I +VPE L+D + L L + + R E E+R++ + N
Sbjct: 220 AQRIVNREVPEGLQDKRLLALDLGALIAGAKFRGEFEERLKAVLN 264
>gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit B (clpB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189025305|ref|YP_001933077.1| ATP-dependent Clp protease, subunit B [Treponema pallidum subsp.
pallidum SS14]
gi|338706048|ref|YP_004672816.1| S14 family endopeptidase ClpB [Treponema paraluiscuniculi Cuniculi
A]
gi|378972572|ref|YP_005221176.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973638|ref|YP_005222244.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974701|ref|YP_005223309.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981547|ref|YP_005229852.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421621|ref|YP_005630980.1| ATP-dependent chaperone protein ClpB [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408501974|ref|YP_006869418.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|6647449|sp|O83110.1|CLPB_TREPA RecName: Full=Chaperone protein ClpB
gi|3322325|gb|AAC65062.1| ATP-dependent Clp protease subunit B (clpB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189017880|gb|ACD70498.1| ATP-dependent Clp protease, subunit B [Treponema pallidum subsp.
pallidum SS14]
gi|291059487|gb|ADD72222.1| ATP-dependent chaperone protein ClpB [Treponema pallidum subsp.
pallidum str. Chicago]
gi|335344109|gb|AEH40025.1| S14 family endopeptidase ClpB [Treponema paraluiscuniculi Cuniculi
A]
gi|374676895|gb|AEZ57188.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374677964|gb|AEZ58256.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679033|gb|AEZ59324.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680099|gb|AEZ60389.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pallidum
DAL-1]
gi|408475337|gb|AFU66102.1| S14 family endopeptidase ClpB [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 878
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 45/307 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP-------LQ 65
T +A+ + A++LA H QV H+ + +L+ G++ + + P LQ
Sbjct: 7 TVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLIEKIGAKPDFLYDELLQ 66
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
C L R P T P C PT+S A A R +++NQ +
Sbjct: 67 C----------LRRKPRVTG-PAAQTRCA-PTLSKAC--------ARAERLALKNQDE-- 104
Query: 126 LAVKIELEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ E L+++I + D + +R++ G +S + + ++ + + P S+ +
Sbjct: 105 ---YVSCEHLLLAISETDSNTARLLHSQGITSKTISAALKDIRGSKRVTSQDPESTFQCL 161
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E L+ A K+ DP+ R+E++ V++ L + K N V++GE
Sbjct: 162 EKYCRDLTTLAREEKI-------DPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTA 214
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+V G+ +I GDVPE+L+ + L L + + R E E+R++ + V+ G G+
Sbjct: 215 IVEGLARRIVSGDVPESLKGKRLLSLDLGALVAGAKFRGEFEERLKAVIEAVQKSDG-GV 273
Query: 301 VLNLGDL 307
+L + +L
Sbjct: 274 ILFIDEL 280
>gi|14335456|gb|AAK60626.1|AF362391_1 heat shock protein Hsp104 [Candida albicans]
Length = 899
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 139/343 (40%), Gaps = 63/343 (18%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-----ASTGLLRTACLQSHSHPL 64
+ T A ++ A LA+++ ++Q+ PLH + ST L+T ++
Sbjct: 2 EDFTDNAIKIINNATELAKQQANSQLVPLHFLAAFIPSDDTEGSTQYLKTLVKRAR---Y 58
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQP 124
+ E N L ++P+ P + + +++ Q R I+ QQ+
Sbjct: 59 EWGDFERIVNRHLVKIPSQNPPP------------DEIRPSYQAGQVLTRANKIKQQQKD 106
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ + +++++L+D S+ + +EAG S +K+ QA+ L S + S ++
Sbjct: 107 SYVAQ---DHILLALLEDQSIKDIFKEAGMSVDTIKT---QAIELR---GSQRIDSRQAD 157
Query: 185 ESNVLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
S+ K R +DP+ R E++ VI L + K N V++G+
Sbjct: 158 SSSSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLIGDAGVGKT 217
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR--------------- 284
+V GV +I GDVP L + L + + + E E+R
Sbjct: 218 SIVEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNEIEKSKEFI 277
Query: 285 ---VEEI-----------KNLVRSCLGRGIVLNLGDLEWAEFR 313
++EI NL++ L RG + +G +AE+R
Sbjct: 278 ILFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 320
>gi|330991477|ref|ZP_08315428.1| Chaperone protein ClpB [Gluconacetobacter sp. SXCC-1]
gi|329761496|gb|EGG77989.1| Chaperone protein ClpB [Gluconacetobacter sp. SXCC-1]
Length = 867
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 37/300 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T + ++ A T+A R + Q+TP H+ +L A++ L+R A Q
Sbjct: 6 FTERSRGFLQAAQTIAMRDYNQQLTPEHLLKALLDDDQGAASSLIRAAGGQ-------VP 58
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
+ + AL +LP + G PT + LV A QA Q+ G Q LL
Sbjct: 59 GITAANDAALAKLP-----KVQGSGAGQPTATGELVRLLDNAEQAAQKAGDEYVAQDRLL 113
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A I+ + P+ + +R AG ++ Q +E+A++ I T S N E+
Sbjct: 114 AA--------IAASETPA-GQALR-AGGATPQA---LEKAIA-AIRKGRTVTSENA--EA 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
N L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 NFDALKKYARDVTEVALQGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEAL++ K L L + + R E E+R++ + + + G+ I+
Sbjct: 218 EGLAQRIVNGDVPEALKNKKLLSLDMGALVAGAKFRGEFEERLKAVLKEIEAAEGQVILF 277
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L K V Q+ + ++N V + R+G R G F
Sbjct: 552 VDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F + I +S F A S
Sbjct: 606 ------LFLGPTGVGKTELCKALARFLFDDEKALLRIDMSEFMEKHAVS-----RLVGAP 654
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSC 780
+ +++L+
Sbjct: 715 NTLIVLTS 722
>gi|298246165|ref|ZP_06969971.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
gi|297553646|gb|EFH87511.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
Length = 864
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 32/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A + +A +AR R HAQV P H+ N +L G++ ++ +A+
Sbjct: 6 FTEKARQAIYEASEIARSRNHAQVEPEHLLNALLLQEGGVVPQIIQKAGG---STQAVLR 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+RL + + GG P IS L A + G +++ +
Sbjct: 63 RVESDLDRL-----SRVYGGSD--PGISPRLHKVLNDAWSEM--GKFKDEY-------MS 106
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++ D D + ++ AG S V + + + P ++ E
Sbjct: 107 VEHLLLALFDSDTEARKALQSAGLSRDSVLQALTSIRGAQRVTDQNPEGKYQALEKYGRN 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A K LDP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 167 LTAAAREGK-------LDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I +GDVP+ L + + + L +S+ R E E+R++ + V S G GI+L + +
Sbjct: 220 QRIVRGDVPKTLENKQVVTLDLSALVAGAKFRGEFEERLKAVLKEVTSAQG-GIILFIDE 278
Query: 307 L 307
L
Sbjct: 279 L 279
>gi|307942493|ref|ZP_07657842.1| ATP-dependent chaperone protein ClpB [Roseibium sp. TrichSKD4]
gi|307774314|gb|EFO33526.1| ATP-dependent chaperone protein ClpB [Roseibium sp. TrichSKD4]
Length = 865
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 32/301 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A T A +GH Q TP H+ +L + G+ +A L + + + L
Sbjct: 7 TERARGFIQSAQTFALGQGHQQFTPEHILKVLLDDAEGM--SAGLVAKAGG-DVQMLRQG 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
AL+++P + GG Q +S A F++A+ A + S ++ LLA+ +
Sbjct: 64 IENALSKMPKVS-----GGAGQL-YLSQATARLFEQAEKIAEKAGDSYVTVERFLLALVM 117
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ E +++++AG + V + +T + + +
Sbjct: 118 DAES---------EAGKLLKQAGLTPNSVNEAINALRQGRTADSATAENQYDALKKYARD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R+E++ ++ L + K N V++GE + G+
Sbjct: 169 LTEVARDGK-------LDPVIGRDEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+L+D + L L + + R E E+R++ + + V + G GI+L + +
Sbjct: 222 LRIVNGDVPESLKDKQLLALDMGALIAGAKYRGEFEERLKSVLSEVEAAAG-GIILFIDE 280
Query: 307 L 307
+
Sbjct: 281 M 281
>gi|358059249|dbj|GAA94937.1| hypothetical protein E5Q_01592 [Mixia osmundae IAM 14324]
Length = 888
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 27/255 (10%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
+ Q T +A ++ A +AR H QV P+HVA+ +LA LL++ ++ ++
Sbjct: 1 MTQNFTEKAQETLQNAFQIARDHSHVQVFPVHVASALLAEDGSLLKSVVERAGGDSVK-- 58
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L + AL RLP+ P + S++L + AQ Q++ Q
Sbjct: 59 -LNRAYQKALVRLPSQEPPP------DDYSPSSSLAKLIRSAQDLQKKNGDSYVSQ---- 107
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ LI ++L D S +++E+ + Q+KS + + S V S +++E
Sbjct: 108 -----DHLISALLGDDSSLALLKESSVNPVQLKSAIAE------VRGSRKVDSRQAEEGF 156
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ T +++ + LDP+ R+ + VI L + K N V++GE +V
Sbjct: 157 DALKKYAIDMTALAE-QGKLDPVIGRDNQIRRVIRILSRRTKSNPVLIGEPGVGKTAIVE 215
Query: 246 GVIDKIEKGDVPEAL 260
G+ +I DVP L
Sbjct: 216 GLAQRIINRDVPPGL 230
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 21/184 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + K+ E L +L + K++ Q + +AN + RSG ++ K+
Sbjct: 548 VSRLKQGEKEKLLNLERTMSKEIVGQPQAIKALANAIRLSRSGL----------ADPKKP 597
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K + AK LA+L+F S + I S +S + S
Sbjct: 598 PVFMFTGSSGSGKTQTAKCLAKLLFDSEEAMIRIDSSEYSEPHSIS-----RLIGSAPGY 652
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQ--KGFKRAIESGRIVTSSGDEVSLGD 773
Y E V P+ V LI+++E+A C Q + + GR+ + G V +
Sbjct: 653 VGYEEGGTLTNKVKERPYCVLLIDEIEKA--CRQFWMLLLQVFDDGRLTDNKGVVVDFSN 710
Query: 774 AIVI 777
I+I
Sbjct: 711 TIII 714
>gi|159901485|ref|YP_001547732.1| ATPase [Herpetosiphon aurantiacus DSM 785]
gi|159894524|gb|ABX07604.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus DSM 785]
Length = 859
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T ++ + + A ++A R G +++TP HV +L + G++ + P +AL
Sbjct: 7 TEKSRAAIFDAQSIASRNGQSEITPEHVLVALLEQADGVVPQIITKMDRDP---QALVAA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
N + RLP + T M G Q + Q + EN+ + + +
Sbjct: 64 VNDEIRRLPRVSGTQMQPGIGQ---------------RLDQVSQTAENEAKGMGDEYVST 108
Query: 133 EQLIISILDD----PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
E L++ + + PS R++ G + + + + + P ++ E
Sbjct: 109 EHLLLGLASERAKGPS-QRLLTSFGITKDAILKTLTAIRGNQRVTDQNPEGKYQALEKYG 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+ A R LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 168 RDLTTLAQ-------RGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I +GDVPEALR+ + + L + + R E E+R++ + + V S GR I+
Sbjct: 221 LAARIVRGDVPEALRNKRLIALDLGALVAGAKFRGEFEERLKAVLSEVTSADGRVILF 278
>gi|150397697|ref|YP_001328164.1| ATPase [Sinorhizobium medicae WSM419]
gi|150029212|gb|ABR61329.1| ATPase AAA-2 domain protein [Sinorhizobium medicae WSM419]
Length = 868
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ + + K + AL +
Sbjct: 14 LQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAK---VGTAAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP T GG+ +S L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVT-----GGNGSV-YLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATA 124
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
SIL +AG + T++ + EI T S+N E L + A
Sbjct: 125 SILS---------KAGVTPTKLNQVIN-----EIRKGRTADSANA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D + + L + + R E E+R++ + N VRS G I+
Sbjct: 229 VPESLKDKRLMALDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILF 277
>gi|340352261|ref|ZP_08675144.1| chaperone protein ClpB [Prevotella pallens ATCC 700821]
gi|339614638|gb|EGQ19329.1| chaperone protein ClpB [Prevotella pallens ATCC 700821]
Length = 862
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A+ LA R G + PLH+ ++ ++ H + + +E
Sbjct: 6 FTIKAQEAIQAAINLASRNGQQVIEPLHILAGIMEKGKDVVNYIF---HKSGINLQIVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ LP + GG +N ++ + ++ Q + +
Sbjct: 63 AVQSEISHLPKVS-----GGEPYLSPDANKVIQ------------TTMDESQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++L + S SR++++AG + +K+ ++ Q + V N+S + N
Sbjct: 106 IEPLLLALLKVNSSASRILKDAGCTEEIMKAAIKD------LRQGSKVQ-NQSGDENYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LSKYARNLVEYARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAL 243
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L L K+V Q + + +AN V + R+G K K F G
Sbjct: 555 DKLLHLEEELHKRVIGQDEAISAVANAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F I +S FS +R Y E
Sbjct: 606 GTGKTELAKALAEYLFNDETMMTRIDMSEYQEKFSVSRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRMVNFKNTIIIMTS 716
>gi|322697157|gb|EFY88940.1| heat shock protein 101 [Metarhizium acridum CQMa 102]
Length = 926
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 124/285 (43%), Gaps = 39/285 (13%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA---------------ASTG 50
T + T A V+ AM LA + GH+Q+ P+H+A ++L ++
Sbjct: 1 MTSRMDFTDRAQKAVEDAMGLAEQYGHSQLLPVHLAVSLLEPPVDLSKDQQNAPQNSTIT 60
Query: 51 LLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
L R ++H P + + L RLP+ P + +++ + A ++A
Sbjct: 61 LFRQVIEKAHGDP---QLFDRALKKTLVRLPSQDPPP------EQVSLAPSFHAVLRKAM 111
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
Q+ Q+ + V + LI ++ DD S+ ++EA ++ + QA+
Sbjct: 112 ELQK-----VQKDTYIGV----DHLITALADDSSMQAPLKEASIPKPKLVQDAVQAIR-- 160
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKR 228
++ + +++ N + T T +++ + +DP+ R E++ V+ L + K
Sbjct: 161 -GTKRVDSKTADTEQENENLAKFTIDMTAMARDK-KIDPVIGREEEIRRVVRILSRRTKN 218
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
N V++GE VV G+ +I DVP+ L+ K L L + +
Sbjct: 219 NPVLIGEPGVGKTTVVEGLAQRIVNRDVPDNLKHCKLLSLDVGAL 263
>gi|156098506|ref|XP_001615285.1| heat shock protein 101 [Plasmodium vivax Sal-1]
gi|148804159|gb|EDL45558.1| heat shock protein 101, putative [Plasmodium vivax]
Length = 905
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 18 SVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVAL 77
+++ +A+R GH+Q+ P+H+ + + + G + L+ +S + L+ + AL
Sbjct: 42 NILNAGKNVAKRYGHSQLKPVHILSALAKSDYG---SNLLKENS--VNASNLKEYIDTAL 96
Query: 78 NRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLII 137
+ A + L A A ++ + K+++E L+
Sbjct: 97 EQTRAGAPLDNKSKIAYSDEVKEVLAEAEALASKYKSQ-------------KVDVEHLLS 143
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
+++D V+ +M E + E+AV + S+ +K +S L L Q S
Sbjct: 144 GLMNDELVNEIMNEVYLT--------EEAVKGIMKSKFEKTKKDKDGKSGGLYLEQFGSN 195
Query: 198 T--KVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
KV ++ R+E++ VIE+L+ K + V+VG+ +V G++ +IEKGD
Sbjct: 196 LNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGD 255
Query: 256 VPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
VP+ LR + L+ F R E E R ++E+KN
Sbjct: 256 VPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKN 296
>gi|56807845|ref|ZP_00365685.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Streptococcus pyogenes M49 591]
Length = 700
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 377 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 430
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A + K R
Sbjct: 431 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA------KLVRA 478
Query: 715 EQS-CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 479 PPGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSF 538
Query: 772 GDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 539 KDTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 571
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 75 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 134
Query: 264 KCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
+ + L + S R + E+R +EEI+N
Sbjct: 135 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 167
>gi|260912679|ref|ZP_05919165.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
gi|260633057|gb|EEX51222.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
Length = 855
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 33/297 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + +A +LA + + + P+H+ + +L G + S ++ L
Sbjct: 6 FTTKFQQAIAEAQSLAIGKDNQFIEPVHLLSALLNQQDGSIAPILTTSGAN---LSVLRN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
VALN+LP + GG+ Q +SN+LV A QR+
Sbjct: 63 ELQVALNKLPQVSGN---GGNVQ---VSNSLVNTLNLCDKLAQQRQDKF----------- 105
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
I E +++ +D ++ + +++G K N++QA+ Q+ ++++ E N
Sbjct: 106 ISSELFLLAGFEDKTLGEIFKKSGVK----KENLQQAIDKVRGGQNV---NDQNAEENRQ 158
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 159 ALDKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 218
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 219 AQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILF 275
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L K+V Q + + +AN + + R+G R G F
Sbjct: 547 VAKMMEGEKEKLLRMEDELHKRVIGQHEAIEAVANAIRRSRAGLSDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F N V I +S F + S
Sbjct: 601 ------LFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVG 654
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + + ++ GR+ G V +
Sbjct: 655 YEEGGYL---TEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNT 711
Query: 775 IVILS 779
+VI++
Sbjct: 712 VVIMT 716
>gi|329955552|ref|ZP_08296460.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
gi|328525955|gb|EGF52979.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
Length = 864
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+H+ +++ + + + + L
Sbjct: 6 FTIKAQEAVQEAVNLTQARGQQAIEPVHLLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + E +
Sbjct: 63 VLDKQVDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEPILLALLNVKSTASTILKDAGMTEKELRNAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|302546991|ref|ZP_07299333.1| ATP-dependent chaperone ClpB [Streptomyces hygroscopicus ATCC
53653]
gi|302464609|gb|EFL27702.1| ATP-dependent chaperone ClpB [Streptomyces himastatinicus ATCC
53653]
Length = 887
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 30/303 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ ++ A T A R GH +V H+ +L GL+ Q + P +A+
Sbjct: 6 LTEKSQEALQNAQTTAMRFGHTEVDGEHLLFALLDQPEGLIPRLVTQVGADP---EAMRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L R P T G F + Q + E + + L +
Sbjct: 63 MLEAELARKPKVTGPGAAPGQV------------FVTQRLSQLLDTAEQEAKRLKDEYVS 110
Query: 132 LEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L+++ D+ S RV++E G + + Q + + + P + ++ E
Sbjct: 111 VEHLVLAFTDEGSGTAAGRVLKEHGITKDAFLHALTQVRGSQRVTSANPEVAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A + K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVLEARSGK-------LDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I +GDVPE LRD L + S R E E+R++ + V++ GR I+L +
Sbjct: 224 LAQRIVRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLAEVKAAQGR-ILLFI 282
Query: 305 GDL 307
+L
Sbjct: 283 DEL 285
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + KE E L L L+++V Q + V +++ +++ RSG R G F
Sbjct: 556 VSRLKEGEREKLLRLDEILQERVIGQDEAVKLVSDAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F + N + + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLAAALFDTEENMIRLDMSEYQE---------RHTVSRL 654
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L++++E+A + ++ GRI + G
Sbjct: 655 VGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHTDVFNTLLQVLDDGRITDAQGRL 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|158312094|ref|YP_001504602.1| ATPase [Frankia sp. EAN1pec]
gi|158107499|gb|ABW09696.1| ATPase AAA-2 domain protein [Frankia sp. EAN1pec]
Length = 870
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 158/368 (42%), Gaps = 51/368 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP---LQCKA 68
LTA + + A++ A G V PLH+ +L A G+ A L++ P ++ +A
Sbjct: 6 LTARSQEALSSAISRATGDGSPLVDPLHLLTALLEAPDGV-GAALLEAVGTPAADIRSRA 64
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
A+ RLP + G + P +S LVA A E Q L
Sbjct: 65 -----EAAVGRLPRAA-----GANVAPPQLSRQLVAVLNNA---------ERQAARLGDE 105
Query: 129 KIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQ--AVSLEICSQSTPVSSNKSKE 185
+E L++++ ++ SR++ EAG + ++ ++ + + S+ P + ++ E
Sbjct: 106 YTSVEHLVVALAEEGGEASRILAEAGATPDALRGAFDRVRGGARRVTSRD-PEGAYRALE 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A K LDP+ R+ ++ V++ L + K N V++GE +
Sbjct: 165 KYSIDLTARARDGK-------LDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAI 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIV 301
V G+ ++ GDVPE+LR + + L + S +++ E E+R+ + +R G+ I+
Sbjct: 218 VEGLALRVAAGDVPESLRGRRIVSLDLGSMVAGSKLRGEFEERLTSVLTEIREAEGQ-II 276
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ +L A ++E M+ G ++ + ++G T Y
Sbjct: 277 TFIDELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLDEYRTR 324
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 325 IEKDPALE 332
>gi|116672282|ref|YP_833215.1| ATPase [Arthrobacter sp. FB24]
gi|116612391|gb|ABK05115.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 889
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 41/344 (11%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ QV P H+ ++ G+ + + P A+ + + A+ LPAS+ G
Sbjct: 24 GNPQVEPAHLLKALMDQREGVAVALLRATGADP---DAVSVQASTAIKALPASS-----G 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSRVM 149
Q +S A + A K AQ N+ L + E L++ + +V ++M
Sbjct: 76 ASVQQAQLSRAALQAIKNAQ---------NEADKLGDTYVSTEHLLLGLSAGSDAVGKLM 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
R+AG S + + + + + P ++ ++ E L+ A + K LDP
Sbjct: 127 RDAGASHEALLAALPGVRGDRKVTNADPENTFQALEKFGTDLTAIARSGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ +I+ L + K N V++GE VV G+ +I DVPE+LR +
Sbjct: 180 VIGRDAEIRRIIQVLSRRTKNNPVIIGEPGVGKTAVVEGLAQRIVANDVPESLRGKTLIA 239
Query: 268 LSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L ++S R E E+R++ + ++S G+ IV + +L +S +
Sbjct: 240 LDLASMVAGAKYRGEFEERLKAVLEEIKSSEGQ-IVTFIDELHTVVGAGASGDSS----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
M+ G ++ + L+G T Y P+LE
Sbjct: 294 ------MDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALE 331
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFF 662
S+ L + L K++ QK V +++ V + R+G R G F F
Sbjct: 565 SQKLLHMEEELGKRLIGQKKAVTAVSDAVRRARAGISDPNRPTGSF------------LF 612
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G K ++AK LA +F V I +S + + + Y E
Sbjct: 613 LGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVA-----RLVGAPPGYVGYEE 667
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L+++VE+A + ++ GR+ G V + I++L+
Sbjct: 668 GGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILVLTS 727
>gi|260753989|ref|YP_003226882.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553352|gb|ACV76298.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 864
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 126/295 (42%), Gaps = 25/295 (8%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT A ++ A T+A R H ++ P H+ +L G+ ++ P+
Sbjct: 6 LTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDDQGMASGLIRRAGGDPMIAVR--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL ++P+ + + G P + N V +A+ + V +E
Sbjct: 63 DTDAALAKIPSVSGS----GANTPPGLDNDTVRLLDQAEQIATKAGDSY-------VTVE 111
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L ++++ + V ++++++G + + + + + +S + + E L
Sbjct: 112 RLLLAMTLMPETQVGKILKDSGLKAEALNTAINEL-------RSGRTADTATAEDRYDAL 164
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 165 KKFARDLTAAAREGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIVEGLAL 224
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE LRD + L + S R E E+R++ + + V+ G+ I+
Sbjct: 225 RIVNGDVPEGLRDRVLMGLDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQIILF 279
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L K+V Q+D V ++ V + R+G R G F
Sbjct: 549 VDKMLEGEREKLIHMEDWLGKRVIGQEDAVKAVSRAVRRARAGLQDPSRPIGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 603 ------LFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEYMEKHAVA-----RLIGAP 651
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 652 PGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFS 711
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 712 NTLIILTS 719
>gi|339021675|ref|ZP_08645681.1| Clp protease ATP-binding subunit ClpB [Acetobacter tropicalis NBRC
101654]
gi|338751322|dbj|GAA08985.1| Clp protease ATP-binding subunit ClpB [Acetobacter tropicalis NBRC
101654]
Length = 868
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 41/302 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T + ++ A T+ R + Q+TP H+ ML A++ L+R A P K
Sbjct: 6 FTERSRGFLQAAQTICIRDFNQQLTPEHLLKAMLDDEEGAASSLIRAAG----GKPEAVK 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
A AL +LP + GG P + LV A QA Q+ G Q
Sbjct: 62 A---ATEQALAKLP-----KVQGGGAGQPQATPDLVRVLDGAEQAAQKAGDSFVAQ---- 109
Query: 127 AVKIELEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
++L+I I D R ++E G + +E+AV+ I T S N E
Sbjct: 110 ------DRLLIGIAQSDTPAGRALKENGATP----DALEKAVA-AIRKGRTVTSENA--E 156
Query: 186 SNVLVLSQTA-SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
+N L + A T+V++ LDP+ R+E++ I+ L + K N V++GE
Sbjct: 157 ANFDALKKYARDVTEVAQAG-KLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTA 215
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+V G+ +I GDVPEAL++ K L L + + R E E+R++ + + S G+ I
Sbjct: 216 IVEGLAQRIVNGDVPEALKNKKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQII 275
Query: 301 VL 302
+
Sbjct: 276 LF 277
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L K V Q+ + ++N V + R+G R G F
Sbjct: 551 VDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGLQDPNRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F + + +S F A +
Sbjct: 605 ------LFLGPTGVGKTELTKALARFLFDDEKALLRVDMSEFMEKHAVA-----RLIGAP 653
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 654 PGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFR 713
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 714 NTIIVLTS 721
>gi|443288064|ref|ZP_21027158.1| Chaperone protein ClpB [Micromonospora lupini str. Lupac 08]
gi|385881830|emb|CCH22251.1| Chaperone protein ClpB [Micromonospora lupini str. Lupac 08]
Length = 863
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 46/295 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
LT ++ + A+ LA +RGHA V P H+ ++L + + GLLR + + L+
Sbjct: 6 LTTKSRETITGAVALANQRGHATVEPWHLLLSLLDTDGSTAAGLLR--AVGADPAELRRA 63
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
AL A++ LPA+ G PT++ V A G+ E +PL
Sbjct: 64 ALR-----AVDALPAAR-----GSSIAEPTLAREFVNAI---------GAAEQIARPLGD 104
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN--VEQAV--SLEICSQSTPVSSNKS 183
E L+ + R G S +KS E+A+ + +
Sbjct: 105 EYTSTEHLLTGL---------ARVGGAVSAALKSAGATEEALVAAFPTVRGGDRRVTTAD 155
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L++ S +DP+ R+ ++ VI+ L + K N V++GE
Sbjct: 156 PEQTYQALTKYGVDLTASARDGKIDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKT 215
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQR----VEEIKN 290
+V G+ +I GDVPE+LRD K + L + + R + E+R +EEIKN
Sbjct: 216 AIVEGLAQRIVAGDVPESLRDKKLVSLDLGAMVAGAQYRGQFEERLKSVLEEIKN 270
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 22/207 (10%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
+ E + L + +L +V Q + V +++ V + R+G R G F
Sbjct: 555 RLLEGETAKLLRMEESLGGRVVGQAEAVGAVSDAVRRARAGVADPDRPTGSF-------- 606
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K ++AK LA +F V I +S + + +
Sbjct: 607 ----LFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVA-----RLVGAPPG 657
Query: 717 SCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y E + EAV P+ V L+++VE+A + ++ GR+ G V +A
Sbjct: 658 YVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNA 717
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGC 801
I+IL+ SS + +Q+ +G
Sbjct: 718 ILILTSNLGSSVISDLTLAEEQRREGV 744
>gi|307729565|ref|YP_003906789.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
gi|307584100|gb|ADN57498.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
Length = 865
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP T G+ Q I L +A + + Q L I
Sbjct: 63 ALDEAITRLPQVQGTD---GNVQ---IGRELTGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++I DD R+ R+ G S ++S + S ++ + +
Sbjct: 108 SEMFLLAIADDKGEAGRLARQHGLSRKSLESAIAAVRGGSQVHSQDAESQREALKKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|197103195|ref|YP_002128573.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
gi|196480471|gb|ACG79998.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
Length = 868
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 36/305 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T A +++ A T+A R H ++ P H+ +L + GL+R+A + L +
Sbjct: 6 FTDRAKGMLQAAQTVAVRLNHQRIAPEHILKALLEDPEGMAAGLIRSA---GGTPELAGR 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
+ + AL ++PA T G Q P + N + +A Q Q+ G
Sbjct: 63 EV----DSALAKIPAVTGA----GASQPPGLDNDAIRLLDQAEQVAQKAGDT-------- 106
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
V +E L +++ + R + AG + ++ + ++ ++ +
Sbjct: 107 FVTVERLLLAMALSASSTAGRALASAGVKPEALSKAIDALRGGRLADTASAEDRYEALKK 166
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L++ A A K LDP+ R+E++ ++ L + K N V++G+ +V
Sbjct: 167 YARDLTEAARAGK-------LDPVIGRDEEIRRTVQILARRTKNNPVLIGDPGVGKTAIV 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP+ LRD K + L + + R E E+R++ + + V+S G IVL
Sbjct: 220 EGLAIRIANGDVPDTLRDRKLMALDMGALIAGAKYRGEFEERLKGVLDEVKSAEGH-IVL 278
Query: 303 NLGDL 307
+ ++
Sbjct: 279 FIDEM 283
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L + AL ++V Q + ++ V + R+G KD + +
Sbjct: 549 VDKMLEGEREKLIHMEEALGRRVIGQAHAISAVSRAVRRARAG-------LKDPN--RPL 599
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSR 713
F G K ++ K LA +F V I +S F S R
Sbjct: 600 GSFLFLGPTGVGKTELTKALAGFLFDDDTAMVRIDMSEFMEKHSVARLIGAPPG------ 653
Query: 714 DEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 654 ---YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHNDVFNVLLQVLDDGRLTDGQGHTVDF 710
Query: 772 GDAIVILSC 780
+ ++IL+
Sbjct: 711 SNTLIILTS 719
>gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
gi|53754469|emb|CAH15953.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
Length = 858
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQMALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + T GG ISNAL + + QR+ + + +
Sbjct: 57 IPLLRTLIDQALDKLPKVSGT---GGDIH---ISNALNRLLNLTDKLSQQRKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I +D ++++++++AG + ++ +++ E + ++
Sbjct: 111 FILA----------AINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL ++ Q + V ++N + + R+G R G F
Sbjct: 548 VSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|52841977|ref|YP_095776.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777611|ref|YP_005186049.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|52629088|gb|AAU27829.1| ClpB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508426|gb|AEW51950.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
Length = 858
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQMALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + T GG ISNAL + + QR+ + + +
Sbjct: 57 IPLLRTLIDQALDKLPKVSGT---GGDIH---ISNALNRLLNLTDKLSQQRKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I +D ++++++++AG + ++ +++ E + ++
Sbjct: 111 FILA----------AINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL ++ Q + V ++N + + R+G R G F
Sbjct: 548 VSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|317474140|ref|ZP_07933417.1| ATP-dependent chaperone ClpB [Bacteroides eggerthii 1_2_48FAA]
gi|316909711|gb|EFV31388.1| ATP-dependent chaperone ClpB [Bacteroides eggerthii 1_2_48FAA]
Length = 864
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ L + RG + P+H+ +++ + + + + L
Sbjct: 6 FTIKAQEAVQTAVNLTQTRGQQAIEPVHLLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMNDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEPILLALLNVKSTASTILKDAGMTEKELRNAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|222053891|ref|YP_002536253.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
gi|221563180|gb|ACM19152.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
Length = 866
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 28/300 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T + + QA A +RG++ + P H+ + ML GL + + P +
Sbjct: 7 MTIKTQEALSQAQEAAAQRGNSAIEPEHLLSAMLGQEGGLTGSILQKMGVTP---NLVNE 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL +LP ++ M PT+++ L AA K +A + + + + LLA+ E
Sbjct: 64 RLAEALRKLPRASGATM--QVFLSPTLNHVLDAAQK--EADTMKDAFVSTEHLLLALVGE 119
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+I IL + V+R A + + ++++ E L
Sbjct: 120 KGSIIAGILRESGVTREGILAALKDIRGDEKI----------------TDQAAEDKYQAL 163
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A R LDP+ R++++ VI+ L + K N V++GE +V G+
Sbjct: 164 TKYARDLTDLARRGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQ 223
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE LRD K + L + + R E E R++ + V G+ I+L + +L
Sbjct: 224 RIISGDVPETLRDKKLVALDMGALIAGAKYRGEFEDRLKAVIKEVEKAEGK-IILFIDEL 282
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 75/192 (39%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V++ E SE L + L+ +V Q + + +AN V + RSG R G F
Sbjct: 553 VNRMLETESEKLVRMEERLKGRVVGQDEALELVANAVRRSRSGLSDPNRPIGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K + A+ LA +F V I +S + R+ +R
Sbjct: 607 ------IFLGPTGVGKTETARALAEFLFDDDQAIVRIDMSEYQ---------ERHTVARL 651
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EA+ P+ + L +++E+A + ++ GR+ G
Sbjct: 652 IGAPPGYVGYEEGGQLTEAIRRRPYSIVLFDEIEKAHSDVFNILLQVLDDGRLTDGQGRT 711
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 712 VDFRNTVIIMTS 723
>gi|218130541|ref|ZP_03459345.1| hypothetical protein BACEGG_02130 [Bacteroides eggerthii DSM 20697]
gi|217986885|gb|EEC53216.1| ATP-dependent chaperone protein ClpB [Bacteroides eggerthii DSM
20697]
Length = 864
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 136/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ L + RG + P+H+ +++ + + + + L
Sbjct: 6 FTIKAQEAVQTAVNLTQTRGQQAIEPVHLLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEVFQKATQYSKEMNDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEPILLALLNVKSTASTILKDAGMTEKELRNAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|393240309|gb|EJD47836.1| hypothetical protein AURDEDRAFT_183947 [Auricularia delicata
TFB-10046 SS5]
Length = 906
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPL------- 64
T +A + A+ LAR +AQV P H+A+ +L +G + A Q H +
Sbjct: 7 FTDKAQESLATAIQLARDHHNAQVHPAHLASALLNEGSGPAQGAQPQHQQHSIFAGAIQK 66
Query: 65 ---QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQ 121
A++ + RLPA P + +I A+ + AQ+ + S+ +
Sbjct: 67 AGGDTAAVQRAIQKLIVRLPAQEPAP------EETSIGPAMQRLLREAQSLPK--SMNDS 118
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSN 181
I + L++++L DP+++ V + S T +KS +EQ ++ +
Sbjct: 119 Y-------IAQDHLLLALLKDPNMADVFKSCALSETALKSAIEQM-------RANKRVDS 164
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
KS ES L++ A LDP+ R+ ++ VI L + K N V++GE
Sbjct: 165 KSAESGFDALNKYAQDLTALAEEGKLDPVIGRDNEIRRVIRVLSRRTKNNPVLIGEPGVG 224
Query: 240 IEGVVRGVIDKIEKGDVPEAL 260
+ G+ +I K DVP +L
Sbjct: 225 KTAIAEGLAQRIVKRDVPASL 245
>gi|323526162|ref|YP_004228315.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407713481|ref|YP_006834046.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
gi|323383164|gb|ADX55255.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
gi|407235665|gb|AFT85864.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
[Burkholderia phenoliruptrix BR3459a]
Length = 865
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+HV ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLAALVAQQDGSARSLLSRAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP T G+ Q I L +A + + Q L I
Sbjct: 63 ALDDAITRLPQVQGTD---GNVQ---IGRELTGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++I DD R+ R+ G S ++S + S ++ + +
Sbjct: 108 SEMFLLAIADDKGEAGRLARQHGLSRKSLESAIAAVRGGSQVHSQDAESQREALKKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|357385913|ref|YP_004900637.1| ClpB protein [Pelagibacterium halotolerans B2]
gi|351594550|gb|AEQ52887.1| ClpB protein [Pelagibacterium halotolerans B2]
Length = 871
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKALELCFNV 75
++ A +A RGH Q TPLH+ ++ +TGL+ A +A+
Sbjct: 14 IQSAQQMALSRGHQQFTPLHILKVLVDDPEGMATGLIERAGGN-------AQAVRAGVEE 66
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRG-SIENQQQPLLAVKIELE 133
L +LP+ + G +S L F+ A+A Q+ G S ++ LLA+ IE
Sbjct: 67 GLKKLPSVS------GDSGQIYLSRELARVFETAEAAAQKAGDSFVAVERMLLALTIE-- 118
Query: 134 QLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQ 193
D +V+ AG ++ + + +E + + + S E+ L +
Sbjct: 119 -------KDTDAGKVLASAGVTANGLNAAIE-------AIRKGRTADSASAENTYDALKK 164
Query: 194 TASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKI 251
A LDP+ R+E++ I+ L + K N V++GE + G+ +I
Sbjct: 165 YARDLTEDAREGKLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRI 224
Query: 252 EKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE+L++ L L + + R E E+R++ + + V+S G+ I+
Sbjct: 225 VNGDVPESLKNKSLLALDMGALIAGAKYRGEFEERLKSVLSEVQSAEGQIILF 277
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 23/200 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + L K+V Q + V ++ V + R+G R G F
Sbjct: 550 VDKMLEGERDKLLRMEDELAKRVIGQSEAVEAVSRAVRRARAGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA+ +F V + +S F A +
Sbjct: 604 ------MFLGPTGVGKTELTKALAQFLFDDETAMVRLDMSEFMEKHAVARLIGAPPGYVG 657
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 658 YDEGGV-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFR 712
Query: 773 DAIVILSCESFSSRSRACSP 792
+ ++I++ + S A P
Sbjct: 713 NTLIIMTS-NLGSEYLAAQP 731
>gi|170751814|ref|YP_001758074.1| ATP-dependent chaperone ClpB [Methylobacterium radiotolerans JCM
2831]
gi|170658336|gb|ACB27391.1| ATP-dependent chaperone ClpB [Methylobacterium radiotolerans JCM
2831]
Length = 874
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A LA R GH Q+ P H+ +L GL+ A QS Q +
Sbjct: 7 TERARGFVQAAQNLAMREGHPQLQPGHLLKVLLDDPEGLCAGLIDRAGGQSRVALAQTEQ 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLL 126
P + G+ P + L+ F A+ A ++ G S ++ LL
Sbjct: 67 W-------------LAKQPKVSGNAAAPQATRELMRLFDTAEKAAEKAGDSYVTVERLLL 113
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A+ +E D R ++ AG + + + + + + N S E+
Sbjct: 114 ALAVE---------KDSEAGRALQAAGVTPASLNAAIN-------ALRKGRTADNASAEN 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 AYDALKKYARDLTEAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+LRD L L + + R E E+R++ + + V + G GI+L
Sbjct: 218 EGLALRIVNGDVPESLRDKSLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEG-GIIL 276
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 24/219 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 550 VDKMLEGEREKLLAMEEALSKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 604 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 652
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 653 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 712
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
+ ++I++ S + P Q +D +E + G
Sbjct: 713 NTLLIMT--SNLGAEYLVNQPAGQDTDAVRDEVMGVVRG 749
>gi|397664204|ref|YP_006505742.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395127615|emb|CCD05814.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQMALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + T GG ISNAL + + QR+ + + +
Sbjct: 57 IPLLRTLIDQALDKLPKVSGT---GGDIH---ISNALNRLLNLTDKLSQQRKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I +D ++++++++AG + ++ +++ E + ++
Sbjct: 111 FILA----------AINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL ++ Q + V ++N + + R+G R G F
Sbjct: 548 VSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|435853886|ref|YP_007315205.1| ATP-dependent chaperone ClpB [Halobacteroides halobius DSM 5150]
gi|433670297|gb|AGB41112.1| ATP-dependent chaperone ClpB [Halobacteroides halobius DSM 5150]
Length = 855
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 39/299 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q+GLT +A LA G +V P H+ +L + G++ L+ ++ L
Sbjct: 9 QEGLT--------EAQYLADDNGQQEVYPAHLLMALLE-NEGIV-GPILEKNN--LDMVE 56
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
L+ ++NRLP + G + + S AL ++A+ + + L
Sbjct: 57 LKDDLRESINRLPK-----VYGDDNELYS-SRALGQVLRQAR---------KEAKELTDK 101
Query: 129 KIELEQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E L+++IL D S++++ G + ++K +E+ E + S ++ E+
Sbjct: 102 YISTEHLLLAILATDNKTSKLLQNKGVNKAKLKKAIEEIRGDEKVTSQHAESQYQALENY 161
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A K LDP+ R+E + +++ L ++K N V++GE +V
Sbjct: 162 TMDLTKQAKEGK-------LDPVIGRDEKIRRLMQVLSRRKKNNPVLIGEPGVGKTAIVE 214
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPEALRD K + L + R E E R++ + ++ G+ I+
Sbjct: 215 GLAQRIINGDVPEALRDKKVISLDMGFLVAGTKYRGEFEDRLKSVLKEIKKAKGQIILF 273
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L +L + L K+V Q + + ++N + + R+G R G F
Sbjct: 548 VTKVMEGEKEKLVNLEDELAKRVVGQANAIKAVSNAIRRSRTGLQDKDRPLGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + + V + +S + A +
Sbjct: 602 ------LFMGPTGVGKTELAKTLAATLFDNQSALVRLDMSEYMERHAVAKLIG------- 648
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
Y+ + E + P+ V L++++E+A + ++ G + S G EV
Sbjct: 649 -SPPGYVGFEDGGQLTEQIRRKPYSVILLDEIEKAHPDVFNILLQILDDGLLTDSQGKEV 707
Query: 770 SLGDAIVILSC 780
+ ++I++
Sbjct: 708 DFRNTVIIMTS 718
>gi|297204729|ref|ZP_06922126.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197710804|gb|EDY54838.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 879
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 30/303 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A + A R GH +V H+ +L GL+ QS + P + +A
Sbjct: 6 LTQKSQEALQEAQSAAGRLGHTEVDGEHLLLALLDQEEGLIPRLLQQSGTEPEELRA--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+R P T G ++ L A+ +R E +
Sbjct: 63 AVREELSRRPKVTGPGAAPGQV---FVTQRLARLLDEAEREAKRLKDEY---------VS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ S + R+++E G + + Q + + + P + ++ E
Sbjct: 111 VEHLLLALAEEGSATAAGRLLKEHGVTRDSFLGALTQIRGNQRVTSANPEVAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A A + LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVAEARAGR-------LDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR I+L +
Sbjct: 224 LAQRIVRGDVPEGLRDRTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAAGR-ILLFV 282
Query: 305 GDL 307
+L
Sbjct: 283 DEL 285
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L + L ++V Q + V +A+ +++ RSG R G F
Sbjct: 556 VSRLQEGEREKLLRLDDILRERVIGQDEAVKLVADAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LAR +F S N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLARALFDSEENMVRLDMSEYQE---------RHTVSRL 654
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L ++VE+A + ++ GRI + G
Sbjct: 655 VGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHTDVFNTLLQVLDDGRITDAQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|406669407|ref|ZP_11076678.1| hypothetical protein HMPREF9707_00581 [Facklamia ignava CCUG 37419]
gi|405583324|gb|EKB57282.1| hypothetical protein HMPREF9707_00581 [Facklamia ignava CCUG 37419]
Length = 838
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 39/296 (13%)
Query: 16 AASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNV 75
A +V+K A LA + +A+VT LH+ +L GL+R + ++LE ++
Sbjct: 10 ALNVIKTANQLAIKYSNAEVTDLHLFCALLRLPEGLIRDDL---KILKIDVQSLEDATDL 66
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQL 135
A+ +L ++ L + AL+ + + A R E+Q I++E L
Sbjct: 67 AIQKLRSAKGLTSLYTSRSY---QRALLISEEVA-----RNQYEDQ--------IKVEHL 110
Query: 136 IISIL--DDPSVSRVMREAGFSST---QVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
++++L +D ++++++ G + T Q+K L +Q T + K V
Sbjct: 111 LLALLREEDMPTAKLVQQYGLTYTTYYQLKGQQFNENLLSGLNQETLQTLKKYGR----V 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A LDP+ R E+ +I L + K N V++GE +V G++
Sbjct: 167 LTQEAMEG-------LLDPVIGREEETRDMIRILSRRIKNNPVLIGEAGVGKTAIVEGLV 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I KGDVP+AL+D L +++ R + E+R+++I L+R G+ I+
Sbjct: 220 QRIAKGDVPDALKDKVVFSLDMTALVAGAKYRGDFEERLKKILELIRDSEGQIILF 275
>gi|405354006|ref|ZP_11023415.1| ClpB protein [Chondromyces apiculatus DSM 436]
gi|397092697|gb|EJJ23446.1| ClpB protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 874
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 31/295 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A +++ TLARR + Q P H+A +L G++ + + K
Sbjct: 7 TVKAQEAIQEGQTLARRADNPQYEPEHLAAALLGQKDGIVEPLLRKIGA---DVKLFAAR 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP M GG + L+ F +A E++ + L I
Sbjct: 64 LGEALQKLPR-----MQGGESAM--LGQRLLKTFDKA---------EDEAKSLKDEFISS 107
Query: 133 EQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L++++ D +V VM+ +G + +V S +++ + S+ ++ E L
Sbjct: 108 EHLLLALTHDKGAVGEVMKSSGVTRERVLSGLKEVRGSGRVTSQDAESTYQALEKYGRDL 167
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 168 TDAARSGK-------LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAR 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE L++ + + L + + R E E+R++ + + G I+
Sbjct: 221 RIVDGDVPEGLKNKRLVSLDLGAMVAGAKYRGEFEERLKAVLKEIADAAGEVILF 275
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 111/294 (37%), Gaps = 49/294 (16%)
Query: 576 LSSNRNSTPNSTSSSDIMEMEY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYD 629
L N+ + DI E+ V + E + L + + L K+V Q+ +
Sbjct: 522 LQKNQKFLKEEVDAEDIAEVVAKWTGIPVSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEA 581
Query: 630 IANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHN 686
++N V + RSG R G F F G K + AK LA +F +
Sbjct: 582 VSNAVRRARSGLQDPNRPIGSF------------IFLGPTGVGKTETAKALAEFLFDDDS 629
Query: 687 NFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIED 740
V I +S + S R Y E + EAV P+ V L ++
Sbjct: 630 AMVRIDMSEYMEKHSVARLVGAPPG---------YVGYEEGGQLTEAVRRRPYTVVLFDE 680
Query: 741 VEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDG 800
+E+A + + ++ GR+ S G V + ++IL+ S +A ++ +
Sbjct: 681 IEKAHHDVFNVLLQILDEGRLTDSQGRTVDFKNTVLILTSNLGSQDIQAGMAGKEELDER 740
Query: 801 CEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFKIMEL 854
EE A+ L+ +D++ + E + K+ I++I++L
Sbjct: 741 TREEVMDALRSHFRPEFLN-------------RVDEVVIFEPLRKKDIYRIVDL 781
>gi|430761748|ref|YP_007217605.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011372|gb|AGA34124.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 857
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 26/256 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R H + P+HV +L G R Q+ + Q ++
Sbjct: 6 LTTKFQEALADAQSLAVGRDHQFIEPVHVLAALLNQEGGTARPVLAQAGGNVNQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL RLP TP G N L+ + A QR+ + + LLA
Sbjct: 63 ALDDALGRLPRVEGTP---GEVHVSNDLNRLLNVSDKL-AQQRKDQYISSELFLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
++ D + +++ AG + ++ VEQ + + ++ E + L
Sbjct: 115 ------AVQDRGPAAEILKRAGVTPGALEKAVEQMRGGASVDDPSAEDTRQALEKYTIDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R++++ ++ L + K N V++GE +V G+
Sbjct: 169 TERAEQGK-------LDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKC 265
+I G+VPE L+D +
Sbjct: 222 RIINGEVPEGLKDKRV 237
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + A+ ++V Q + V +AN + + R+G R G F
Sbjct: 548 VSKMLEGEKDKLLRMEEAVGQRVVGQDEAVRAVANAIRRARAGLSDPNRPSGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELTKALAAFLFDTEDAMVRIDMSEFMEKHSVARMIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|288918778|ref|ZP_06413124.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288349863|gb|EFC84094.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 870
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 155/365 (42%), Gaps = 45/365 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + + A++ A G V PLH+ +L A G+ A L + + A+
Sbjct: 6 LTARSQEALSSAISRATGDGSPLVDPLHLLTALLEAHDGV-GAALLDAVG--VDAAAVRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP + G + P +S LVA A+ R S E I
Sbjct: 63 RAEAAVGRLPRAA-----GANVAPPQLSRQLVAVLNNAERQAARMSDEY---------IS 108
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQ--AVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ SR++ + G ++ ++ ++ + + S+ P + ++ E
Sbjct: 109 VEHLVVALAEEGGEASRILADTGATADALRGAFDRVRGGARRVTSRD-PEGAYRALEKYS 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L+ A K LDP+ R+ ++ V++ L + K N V++GE +V G
Sbjct: 168 IDLTARAREGK-------LDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVLNL 304
+ ++ GDVPE+LR + + L + S +++ E E+R+ + +R G+ ++
Sbjct: 221 LALRVAAGDVPESLRGRRIVSLDLGSMVAGSKLRGEFEERLTSVLTEIREAEGQ--IITF 278
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
D A ++E M+ G ++ + ++G T Y
Sbjct: 279 IDELHTVVGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLDEYRSRIEK 327
Query: 365 HPSLE 369
P+LE
Sbjct: 328 DPALE 332
>gi|54297663|ref|YP_124032.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|296107341|ref|YP_003619041.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|53751448|emb|CAH12866.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|295649242|gb|ADG25089.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|307610448|emb|CBX00019.1| endopeptidase Clp ATP-binding chain B [Legionella pneumophila 130b]
Length = 858
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQMALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + T GG ISNAL + + QR+ + + +
Sbjct: 57 IPLLRTLIDQALDKLPKVSGT---GGDIH---ISNALNRLLNLTDKLSQQRKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I +D ++++++++AG + ++ +++ E + ++
Sbjct: 111 FVLA----------AINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL ++ Q + V ++N + + R+G R G F
Sbjct: 548 VSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|86604906|ref|YP_473669.1| ATP-dependent chaperone protein ClpB [Synechococcus sp. JA-3-3Ab]
gi|86553448|gb|ABC98406.1| ATP-dependent chaperone protein ClpB [Synechococcus sp. JA-3-3Ab]
Length = 880
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 29/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A S + Q+ +ARR Q+ H+ ++L GL +T ++ P +
Sbjct: 9 FTEKAWSAIVQSQDVARRHQQQQLETEHLLISLLDQEGGLTQTILQRAGLDPRLVRDRVE 68
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
F +N+ P L + L RA+ ++ + I
Sbjct: 69 SF---INQQPKLARVDQL-------YLGRGLETTLDRAEEFRKEYGDDF---------IS 109
Query: 132 LEQLIISILDDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++ LDD V RV+ G + ++K ++Q + + P S ++ E
Sbjct: 110 VEHLLLGSLDDERVGKRVLAPLGLTVERLKPVIQQVRGKQRVTDKNPESRYEALERYGRD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ VI+ L + K N V++GE +V G+
Sbjct: 170 LTKAAREGK-------LDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE+L++ + + L + S
Sbjct: 223 QRINRGDVPESLKNRRVIALDMGSL 247
>gi|415709998|ref|ZP_11463559.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 6420B]
gi|388055692|gb|EIK78584.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 6420B]
Length = 864
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 42/307 (13%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISIL-DDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK- 184
+ E ++I ++ +P +V+ + + K NV S ++ ++ P +K
Sbjct: 106 --VSTEHMLIGMVASEPNAVADIFK---------KHNV----SADVLRKAVPTVRGGAKV 150
Query: 185 -----ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECL 237
E N L + + LDP+ R++++ VI+ L + K N V++GE
Sbjct: 151 TSPDAEGNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPG 210
Query: 238 ASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSC 295
VV G+ +I GDVP L++ + + L ++S + R E E+R++ + ++
Sbjct: 211 VGKTAVVEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQS 270
Query: 296 LGRGIVL 302
G+ I
Sbjct: 271 DGQIITF 277
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|117929326|ref|YP_873877.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117649789|gb|ABK53891.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 864
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 152/367 (41%), Gaps = 50/367 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG----LLRTACLQSHSHPLQCK 67
LT ++ + QA+ A GH V P H+ +L S G LLR + + LQ
Sbjct: 6 LTTKSQEALNQAVHAAAEAGHPHVEPAHLLMALLQQSDGTALPLLRAVGVNPVA--LQGD 63
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E+ L+RLP ++ + P+I L AA K A L
Sbjct: 64 VREI-----LDRLPRASGATVAPPGLDRPSI-QVLNAAAKEAAE-------------LGD 104
Query: 128 VKIELEQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L++ + + +V+ ++R G + + + E+ + P S+ ++ E
Sbjct: 105 EYVSTEHLLVGLAREGGAVAALLRRHGATPENLLAAFERVRGHARVTSPDPESTYQALEK 164
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A + LDPI R+ ++ VI+ L + K N V++GE +V
Sbjct: 165 YGVDLTERARKGQ-------LDPIIGRDTEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+LRD + + L + + R E E+R++ + N ++ G+ V+
Sbjct: 218 EGLAQRIVAGDVPESLRDKRLIALDLGAMVAGAKYRGEFEERLKAVLNEIKESNGQ--VI 275
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
D A ++E M+ G ++ + ++G T Y
Sbjct: 276 TFIDELHTVVGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLDEYRERI 324
Query: 363 SGHPSLE 369
P+LE
Sbjct: 325 EKDPALE 331
>gi|389696003|ref|ZP_10183645.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
gi|388584809|gb|EIM25104.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
Length = 873
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 48/309 (15%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A LA R GH Q+ P H+ +L GL C L
Sbjct: 7 TERARGFVQAAQNLAVREGHPQLAPGHILKVLLDDPEGL--------------CAGL--- 49
Query: 73 FNVALNRLPASTST--------PMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQ 122
+ A R + +T P + G P + L+ F A+ A ++ G S +
Sbjct: 50 IDRAGGRSRDAHATVEQWLAKQPKVSGSASQPQATRELMRFFDTAEKAAEKAGDSFVTVE 109
Query: 123 QPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
+ LLA+ +E D +++ +AG ++ + + + +T ++
Sbjct: 110 RMLLALAVE---------KDTEAGKILAQAGVTAQGLNAAINALRKGRTADNATAENAYD 160
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ + L++ A K LDP+ R+E++ I+ L + K N V++GE
Sbjct: 161 ALKKYARDLTEAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+V G+ +I GDVPE+L+D + L L + + R E E+R++ + V S G
Sbjct: 214 TAIVEGLALRIVNGDVPESLKDKQLLALDMGALIAGAKYRGEFEERLKAVLQEVTSAEG- 272
Query: 299 GIVLNLGDL 307
GI+L + ++
Sbjct: 273 GIILFIDEM 281
>gi|240142543|ref|YP_002967054.1| putative ATP-dependent protease ATP-binding subunit
[Methylobacterium extorquens AM1]
gi|240012488|gb|ACS43713.1| Putative ATP-dependent protease ATP-binding subunit
[Methylobacterium extorquens AM1]
Length = 871
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 43/307 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A ++ A +LA R G+ Q T LH+ +L + GL+ A S S + +A
Sbjct: 7 TDRAKGFIQSAQSLATREGNQQFTSLHLLKVLLDDNEGLAGGLIDRAGGTSRSILGETEA 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRA-QAHQRRGSIENQQQP 124
AL +LP + G Q P ++ AA K A +A ++E Q
Sbjct: 67 -------ALAKLPKVSGA----GSGQVYLAPDLARVFAAAEKIADKAGDSFVTVERLLQA 115
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
L A K D +++ G + + +E + + + S
Sbjct: 116 LAADK------------DGDAGKLLARGGVGKQHLDAAIE-------ALRKGRTADSASA 156
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E+ L + A + LDP+ R+E++ I+ L + K N V++GE
Sbjct: 157 ENAYDALKKYARDLTKAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTA 216
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+V G+ +I GDVPE+L+D K L L + S R E E+R++ + V S G GI
Sbjct: 217 IVEGLALRIVNGDVPESLKDKKLLSLDLGSLIAGAKYRGEFEERLKAVLQEVTSAAG-GI 275
Query: 301 VLNLGDL 307
+L + ++
Sbjct: 276 ILFIDEM 282
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 69/188 (36%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + L K+V Q V ++ V + R+G R G F
Sbjct: 548 VDRMLEGEKEKLLKMEEQLIKRVVGQTQAVRAVSTAVRRARAGLQDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR--ADSTEDSRNKRS 712
F G K ++AK LA +F V I +S F A
Sbjct: 602 ------MFLGPTGVGKTELAKALAEFMFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 656 YDEGGV-----LTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 710
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 711 NVVIILTS 718
>gi|406867503|gb|EKD20541.1| heat shock protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 932
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 47/308 (15%)
Query: 7 TIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AA 47
T T A + AM +A H Q+ PLH+A+++L A+
Sbjct: 3 TSNMNFTDRATKALSDAMAIAESYAHPQLLPLHLASSLLDPPVDESKDQQATVNASHGAS 62
Query: 48 STGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFK 107
S L R ++H P +A + N AL RLP T P P+ + L +
Sbjct: 63 SQSLFRQVVERAHGDP---QAFQRALNRALVRLP--TQNPPPDQISMAPSFTKLL----R 113
Query: 108 RAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAV 167
+A Q+ Q+ +AV + LII++ +D + ++E +V + Q +
Sbjct: 114 QANELQK-----TQKDSFIAV----DHLIIALSEDTTCQAALKEGNIPHVKVLQDAVQNI 164
Query: 168 -SLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMS 224
T + + + + TA+A + +DP+ R E++ V+ L
Sbjct: 165 RGTRRVDSKTADTEEEFENLKKFTIDMTATAREGK-----IDPVIGREEEIRRVVRILSR 219
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVE 282
+ K N V++GE VV G+ +I DVP+ L K L L + S + R E E
Sbjct: 220 RTKNNPVLIGEPGVGKTTVVEGLAQRIVNNDVPDNLATCKLLSLDVGSLVAGSKYRGEFE 279
Query: 283 QRVEEIKN 290
+R++ + N
Sbjct: 280 ERMKGLLN 287
>gi|448090847|ref|XP_004197175.1| Piso0_004415 [Millerozyma farinosa CBS 7064]
gi|448095287|ref|XP_004198206.1| Piso0_004415 [Millerozyma farinosa CBS 7064]
gi|359378597|emb|CCE84856.1| Piso0_004415 [Millerozyma farinosa CBS 7064]
gi|359379628|emb|CCE83825.1| Piso0_004415 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 137/348 (39%), Gaps = 78/348 (22%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA----STGLLRTACLQSHSHPLQCK 67
T A ++ A LA+ H Q+ PLH M+ ST L+T + +
Sbjct: 6 FTDNALRIITAATQLAKDNSHTQLVPLHFLAAMVPTDDENSTPYLKTLIEKGR---YEWA 62
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N L RLP+ T P + ++ Q I++QQ+
Sbjct: 63 NFERAVNRHLVRLPSQTPAP------------EDIRPSYAAGQVLTNATKIKSQQKDSYV 110
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE----ICSQSTPVSS--- 180
+ + +++++L+D S+ + +E G + +K+ QA+ L I S+ SS
Sbjct: 111 AQ---DHILLALLEDNSIKDIFKECGINVEAIKT---QAIELRGNQRIDSRQADSSSSYE 164
Query: 181 --NKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGEC 236
NK E L++ A K+ DP+ R E++ VI L + K N V++GE
Sbjct: 165 FLNKYCED----LTEKARQGKI-------DPVIGREEEIRRVIRVLARRTKSNSVLIGEA 213
Query: 237 LASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI------ 288
+V GV +I GDVP L + + L + + + E E+R++ +
Sbjct: 214 GVGKTSIVEGVAQRIIDGDVPNVLANSRLFALDLGALTAGAKYKGEFEERIKGVLNDIEK 273
Query: 289 -----------------------KNLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G +AE+R
Sbjct: 274 SKEMIVLFIDEIHMLMGDGKSDAANLLKPMLARGTLHCIGATTFAEYR 321
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 17/184 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L ++ L +V Q + V ++N V RSG + +
Sbjct: 557 VTKLTQAENSKLINMEKVLSSEVVGQSEAVKAVSNAVRLSRSGL----------ANPNQP 606
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G+ K ++AK++A +F + I S + S
Sbjct: 607 ASFLFLGLSGSGKTELAKKVAGFLFADERAMIRIDCSELGDKWSAS-----KLLGAAPGY 661
Query: 718 CSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E E + P+ V L ++VE+AD + ++ GR+ +S G V+ +AI
Sbjct: 662 VGYEEGGILTEPLLRRPYSVILFDEVEKADPAVLTVLLQILDDGRVTSSQGKVVNCSNAI 721
Query: 776 VILS 779
+I++
Sbjct: 722 IIMT 725
>gi|340348958|ref|ZP_08671982.1| chaperone protein ClpB [Prevotella nigrescens ATCC 33563]
gi|339612524|gb|EGQ17327.1| chaperone protein ClpB [Prevotella nigrescens ATCC 33563]
Length = 862
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A+ LA R G + PLH+ ++ ++ H + + +E
Sbjct: 6 FTIKAQEAIQAAIDLASRNGQQVIEPLHILAGIMEKGKDVVNYLF---HKSGINLQIVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LP + GG +N ++ + ++ Q + +
Sbjct: 63 AVQSEITHLPKVS-----GGEPYLSPDANKVIQ------------TTMDESQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++L + S SR++++AG + +++ +++ Q + V N+S + N
Sbjct: 106 IEPLLLALLKVNSSASRILKDAGCTEEIMRAAIKE------LRQGSKVQ-NQSGDENYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LSKYARNLVEYARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAL 243
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L L K+V Q + + +AN V + R+G K K F G
Sbjct: 555 DKLLHLEEELHKRVIGQDEAISAVANAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F I +S FS +R Y E
Sbjct: 606 GTGKTELAKALAEYLFNDETMMTRIDMSEYQEKFSVSRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTS 716
>gi|415728587|ref|ZP_11472032.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
gi|388065003|gb|EIK87508.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
Length = 864
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISIL-DDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +P +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASEPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|346319655|gb|EGX89256.1| heat shock protein HSP98 [Cordyceps militaris CM01]
Length = 923
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 39/285 (13%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTG 50
T + T A V+ AM LA + H+Q+ P+H+A ++L A
Sbjct: 1 MTARMDFTDRAQKAVEDAMALAEQYAHSQLVPVHLAVSLLEPPVDQSKDQQNAPPGAIAT 60
Query: 51 LLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ 110
L R ++H P + + L RLP+ P + ++S A ++A
Sbjct: 61 LFRQVIERAHGDP---QLFDRALKKTLVRLPSQDPPP------EQVSLSPQFHAVLRKAM 111
Query: 111 AHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE 170
Q+ Q+ + V + LI ++ ++P++ +REA ++ + QA+
Sbjct: 112 ELQK-----VQKDTYIGV----DHLITALSEEPTIQATLREANIPKPKLIQDAVQAIR-- 160
Query: 171 ICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKR 228
++ + +++ N + T T +++ + +DP+ R E++ VI L + K
Sbjct: 161 -GTKRVDSKTADTEQENENLAKFTIDMTAMARDK-KVDPVIGREEEIRRVIRILSRRTKN 218
Query: 229 NFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
N V++GE VV G+ +I DVP+ L+ + L L + +
Sbjct: 219 NPVLIGEPGVGKTTVVEGLAQRIVIRDVPDNLKSCRLLSLDVGAL 263
>gi|423349309|ref|ZP_17326965.1| chaperone ClpB [Scardovia wiggsiae F0424]
gi|393702857|gb|EJD65059.1| chaperone ClpB [Scardovia wiggsiae F0424]
Length = 888
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 29/291 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A + A+ A G+ QV PLH+ +++L G+++ S + + A
Sbjct: 5 FTTMAQEAIGDAVQSASAAGNPQVGPLHLLDSLLRQDGGVVKGLIQASGADTQKIGA--- 61
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL LP+++ G P S L + A + GS+ ++ I
Sbjct: 62 QVRRALASLPSAS-----GSSTAQPDASRQLAKVL--SDARREMGSLGDEY-------IS 107
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L+I+I D ++R AG + ++ + + + S K+ E +
Sbjct: 108 TEHLLIAIAQSDGEAGDILRSAGADAKALRKAIPEVRGGAKVTSPDAEGSYKALEKYSID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R+ ++ VI+ L + K N V++GE VV G+
Sbjct: 168 LTERAREGK-------LDPVIGRDAEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLG 297
++ GDVP L++ + + L +SS + R E E+R++ + N ++ G
Sbjct: 221 QRVVAGDVPAGLQNRRIISLDMSSMVAGSKYRGEFEERMKAVLNEIKKSDG 271
>gi|414342706|ref|YP_006984227.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
oxydans H24]
gi|411028041|gb|AFW01296.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
oxydans H24]
Length = 866
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQ 65
Q T + ++ A T+A R H Q+TP H+ +L A++GL+R A P
Sbjct: 4 QKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAG----GDP-- 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
K ++ + AL +LP + GG P + V A+A + + Q
Sbjct: 58 -KVVQAANDAALAKLP-----KVQGGGAGQPQATPDFVRLLDTAEAAAKNAGDSHVAQ-- 109
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN---VEQAVSLEICSQSTPVSSNK 182
++L+++I S AG + + K++ +E+AV+ +I T S+
Sbjct: 110 -------DRLLVAIAASNS------PAGKALVEGKADASALERAVA-QIRKGRTVTSA-- 153
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
S E+ L + A LDP+ R+E++ I+ L + K N V++GE
Sbjct: 154 SAENTFDALKKYARDVTAVAQAGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+V G+ +I GDVPEALR+ K + L + + R E E+R++ + V + G
Sbjct: 214 TAIVEGLALRIVNGDVPEALRNKKLMSLDMGALIAGAKFRGEFEERLKAVLKEVETAEGE 273
Query: 299 GIVL 302
I+
Sbjct: 274 IILF 277
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L +V Q+ + ++N V + R+G R G F
Sbjct: 551 VDRMLEGERAKLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQDPNRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA+ +F + I +S F A S
Sbjct: 605 ------LFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPGYVG 658
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 659 YDEGGV-----LTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFR 713
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 714 NTIIVLTS 721
>gi|288941086|ref|YP_003443326.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
gi|288896458|gb|ADC62294.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
Length = 865
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q LTA+ + A +LA R H + P+H+ +L G +R + +
Sbjct: 3 QDKLTAKFQLALADAQSLALGRDHQFIEPVHLMAALLDQQGGTIRHLL---NKADVNTNK 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQPLL 126
L AL RLP + +GG +SN L + A QR N Q
Sbjct: 60 LRSALGEALERLP---TVQGVGGDVH---VSNDLSRLLNLTDKLAQQR-----NDQY--- 105
Query: 127 AVKIELEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
I E +++ L+D ++ +REAG S KS +EQA+ QS V+ ++E
Sbjct: 106 ---ISSELFVLAALEDKGTLGSALREAGAS----KSAIEQAIQTVRGGQS--VNDPNAEE 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ T T+ ++ + LDP+ R++++ I+ L + K N V++GE +
Sbjct: 157 QRQALEKYTIDLTERAE-QGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKN 290
V G+ +I G+VPE L+ + L L +++ + R E E+R++ + N
Sbjct: 216 VEGLAQRIVNGEVPEGLKSKRLLALDMAALIAGSKFRGEFEERLKAVLN 264
>gi|50914607|ref|YP_060579.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pyogenes MGAS10394]
gi|50903681|gb|AAT87396.1| ATP-dependent clp protease ATP-binding subunit [Streptococcus
pyogenes MGAS10394]
Length = 760
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|390949641|ref|YP_006413400.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
gi|390426210|gb|AFL73275.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
Length = 866
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 29/287 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q LTA+ + A +LA R H + P+H+ +L G +R ++ +
Sbjct: 3 QDKLTAKFQMALADAQSLALGRDHQFIEPIHLMVALLDQEGGTVRHLLTRAD---VNANR 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
L AL+RL GG N L+ + A QR N Q
Sbjct: 60 LRSTLGEALDRLATVQGA---GGDVHLGNDLNRLLNLTDKL-AQQR-----NDQY----- 105
Query: 129 KIELEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E +++ LDD V +REAG S K+ +E+A+ E+ V+ ++E
Sbjct: 106 -ISSELFVLAALDDKGVLGNALREAGAS----KAAIEKAIQ-EVRGGQQAVNDPNAEEQR 159
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ T T+ ++ + LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 160 QALQKYTIDLTERAE-QGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 218
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VPE L+ + L L +++ R E E+R++ + N
Sbjct: 219 GLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLN 265
>gi|445115470|ref|ZP_21378256.1| chaperone ClpB [Prevotella nigrescens F0103]
gi|444840407|gb|ELX67440.1| chaperone ClpB [Prevotella nigrescens F0103]
Length = 862
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A+ LA R G + PLH+ ++ ++ H + + +E
Sbjct: 6 FTIKAQEAIQAAIDLASRNGQQVIEPLHILAGIMEKGKDVVNYLF---HKSGINLQIVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LP + GG +N ++ + ++ Q + +
Sbjct: 63 AVQSEITHLPKVS-----GGEPYLSPDANKVIQ------------TTMDESQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++L + S SR++++AG + +++ +++ Q + V N+S + N
Sbjct: 106 IEPLLLALLKVNSSASRILKDAGCTEEIMRAAIKE------LRQGSKVQ-NQSGDENYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LSKYARNLVEYARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAL 243
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L L K+V Q + + +AN V + R+G K K F G
Sbjct: 555 DKLLHLEEELHKRVIGQDEAISAVANAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F I +S FS +R Y E
Sbjct: 606 GTGKTELAKALAEYLFNDETMMTRIDMSEYQEKFSVSRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTS 716
>gi|71903841|ref|YP_280644.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pyogenes MGAS6180]
gi|306827043|ref|ZP_07460341.1| ATP-dependent Clp protease [Streptococcus pyogenes ATCC 10782]
gi|383480265|ref|YP_005389159.1| ATP-dependent endopeptidase clp ATP-binding subunit ClpE/ClpA
[Streptococcus pyogenes MGAS15252]
gi|383494247|ref|YP_005411923.1| ATP-dependent endopeptidase clp ATP-binding subunit ClpE/ClpA
[Streptococcus pyogenes MGAS1882]
gi|386363042|ref|YP_006072373.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
pyogenes Alab49]
gi|421892498|ref|ZP_16323151.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Streptococcus
pyogenes NS88.2]
gi|71802936|gb|AAX72289.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pyogenes MGAS6180]
gi|94544273|gb|ABF34321.1| ATP-dependent endopeptidase clp ATP-binding subunit clpE
[Streptococcus pyogenes MGAS10270]
gi|304430789|gb|EFM33800.1| ATP-dependent Clp protease [Streptococcus pyogenes ATCC 10782]
gi|350277451|gb|AEQ24819.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
pyogenes Alab49]
gi|378928255|gb|AFC66461.1| ATP-dependent endopeptidase clp ATP-binding subunit ClpE/ClpA
[Streptococcus pyogenes MGAS15252]
gi|378929974|gb|AFC68391.1| ATP-dependent endopeptidase clp ATP-binding subunit ClpE/ClpA
[Streptococcus pyogenes MGAS1882]
gi|379981750|emb|CCG26873.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Streptococcus
pyogenes NS88.2]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|302840379|ref|XP_002951745.1| hypothetical protein VOLCADRAFT_61636 [Volvox carteri f.
nagariensis]
gi|300262993|gb|EFJ47196.1| hypothetical protein VOLCADRAFT_61636 [Volvox carteri f.
nagariensis]
Length = 928
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 37/304 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + +V ++ LA+ HA +TPLH+A + G+ R+A + +A C
Sbjct: 9 TEKVNEIVSSSIHLAQEEQHATLTPLHLAVVLFEEPQGIARSAASRVGGD----EAWRSC 64
Query: 73 FNVA---LNRLPASTSTP--MLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
V L +LP P + G +S A A R A+
Sbjct: 65 IRVLRRRLAKLPKVQPAPDSVSPGRDLTKMLSTAAKAQKDRNDAY--------------- 109
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ ++ L+ +++ VS + EAG S Q+++ + + + S + PV S ++ ++N
Sbjct: 110 --LGVDTLLSAVIAAQDVSEALSEAGVSKAQLETALAE---VRQASGNGPVDS-QTADAN 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
LS+ + + R DP+ R++++ V+ L + K N V++GE +V
Sbjct: 164 FDALSKYGTDLTANAARA--DPVIGRDDEIRRVVRVLCRRTKNNPVLIGEPGVGKTAIVE 221
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I KGDVPE LR V+ + L + S R E E+R++ + V+ G+ +VL
Sbjct: 222 GLAQRIVKGDVPETLRGVRLISLDMGSLVAGAKYRGEFEERLKAVLTEVQQQQGK-VVLF 280
Query: 304 LGDL 307
+ +L
Sbjct: 281 IDEL 284
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + K+ E L L + L+K+V Q D V +A+ VL+ R+G R +
Sbjct: 552 VSRLKQSEREKLLELRSELQKRVVGQDDAVAAVADAVLRSRAGLASRN---------RGS 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
++LF G K ++AK LA+L+F + I + + R+ SR +
Sbjct: 603 SFLFL-GPTGVGKTELAKALAQLLFDDEKMMIRIDMGEYM---------ERHSVSRLVGA 652
Query: 718 -CSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y+ + EAV P+ V L ++VE+A ++ GR+ S G V+
Sbjct: 653 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHAEVFNILLSILDDGRVTDSKGRTVNF 712
Query: 772 GDAIVILS 779
+ ++IL+
Sbjct: 713 ANTVIILT 720
>gi|453329128|dbj|GAC88738.1| Clp protease ATP-binding subunit ClpB [Gluconobacter thailandicus
NBRC 3255]
Length = 866
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQ 65
Q T + ++ A T+A R H Q+TP H+ +L A++GL+R A P
Sbjct: 4 QKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAG----GDP-- 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
K ++ + AL +LP + GG P + V A+A + + Q
Sbjct: 58 -KVVQAANDAALAKLP-----KVQGGGAGQPQATPDFVRLLDSAEAAAKNAGDSHVAQ-- 109
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN---VEQAVSLEICSQSTPVSSNK 182
++L+++I S AG + + K++ +E+AV+ +I T S+
Sbjct: 110 -------DRLLVAIAASNS------PAGKALVEGKADASALERAVA-QIRKGRTVTSA-- 153
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
S E+ L + A LDP+ R+E++ I+ L + K N V++GE
Sbjct: 154 SAENTFDALKKYARDVTAVAQAGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+V G+ +I GDVPEALR+ K + L + + R E E+R++ + V + G
Sbjct: 214 TAIVEGLALRIVNGDVPEALRNKKLMSLDMGALIAGAKFRGEFEERLKAVLKEVETAEGE 273
Query: 299 GIVL 302
I+
Sbjct: 274 IILF 277
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L +V Q+ + ++N V + R+G R G F
Sbjct: 551 VDRMLEGERAKLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQDPNRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA+ +F + I +S F A S
Sbjct: 605 ------LFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPGYVG 658
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 659 YDEGGV-----LTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFR 713
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 714 NTIIVLTS 721
>gi|148359294|ref|YP_001250501.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
gi|148281067|gb|ABQ55155.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
Length = 858
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQMALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + T GG ISNAL + + QR+ + + +
Sbjct: 57 IPLLRTLIDQALDKLPKVSGT---GGDIH---ISNALNRLLNLTDKLSQQRKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I +D ++++++++AG + ++ +++ E + ++
Sbjct: 111 FVLA----------AINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL ++ Q + V ++N + + R+G R G F
Sbjct: 548 VSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVVLLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|139473467|ref|YP_001128183.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pyogenes str. Manfredo]
gi|134271714|emb|CAM29947.1| putative ATP-dependent Clp protease ATP-binding subunit
[Streptococcus pyogenes str. Manfredo]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|21910699|ref|NP_664967.1| ATP-dependent protease [Streptococcus pyogenes MGAS315]
gi|28895611|ref|NP_801961.1| ATP-dependent protease [Streptococcus pyogenes SSI-1]
gi|21904902|gb|AAM79770.1| putative ATP-dependent protease [Streptococcus pyogenes MGAS315]
gi|28810860|dbj|BAC63794.1| putative ATP-dependent protease [Streptococcus pyogenes SSI-1]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|330997711|ref|ZP_08321556.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila
YIT 11841]
gi|329570239|gb|EGG51979.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila
YIT 11841]
Length = 866
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 128/296 (43%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A +++A+ L + RG + P H+ +L + + + +E
Sbjct: 6 FTIKAQEAIQEAVNLVQARGQQAIEPEHLLAGILKVGENV---TNFLFQKLGVNSRQIEQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LP + GG P +S RAQ + +G E +
Sbjct: 63 VLESQIASLPK-----VQGGE---PYLSRESNEVLTRAQDYASKGGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S SR++++AG + ++ S V + + V+S S E
Sbjct: 106 LEPMLLALLNVKSTASRILKDAGITEKELASAVNE------LRKGEKVTSQNS-EDTYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LNKYAKNLIEEARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L+D + L + + + E E+R++ + N V GR I+
Sbjct: 219 HRILRGDVPENLKDKQLYSLDMGALIAGAKYKGEFEERLKSVINEVTKSEGRIILF 274
>gi|327412779|emb|CAX67785.1| putative Clp ATPase [Yersinia enterocolitica]
Length = 847
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 65/348 (18%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
I L EA + A++LA R H +V H+ ++ A TGL+ L + L+
Sbjct: 10 IVANLDVEARKCLDAAISLAVSRTHHEVETEHLLLALMIAHTGLIEKLGLNAG---LRGD 66
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L +LN L + S P P +S +LV +R+ H S+ QQ L
Sbjct: 67 DLLDALTTSLNSLRSGNSRP--------PVLSESLVEHLERSWLH---ASVNWQQNHL-- 113
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQA--VSLEICSQST---PVSSNK 182
++ + +L+D S ++V R + S + + E A + L+ C+ + P++S
Sbjct: 114 ---PVQAFLGCLLNDLSGNQV-RFSSMLSQALSCDGELADKLLLQECTTAVARQPMNSGN 169
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
S +S + ++ + K +LDP R ++ +I+ L+ +R+ N V+ GE
Sbjct: 170 SDDSTLAKYTRNLTEQARQK---ALDPALGREAEIRQIIDVLLRRRQNNPVLTGEPGVGK 226
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVE----EIK----- 289
VV G+ +I +G VPE L++++ L L + + V E E R++ E+K
Sbjct: 227 TAVVEGLAQRIVEGSVPETLKNMEILSLDMGLLQAGASVKGEFENRLQTLLREVKAYSSP 286
Query: 290 ------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + L WAE++
Sbjct: 287 VILFIDEAHTLIGAGGQAGQNDAANLLKPALARGEIRVLAATTWAEYK 334
>gi|170516911|gb|ACB15391.1| ClpB [Bifidobacterium longum]
Length = 852
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 145/356 (40%), Gaps = 43/356 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
V A+ A G+AQV LHV + +L G+ R+ + P +A+ AL
Sbjct: 4 VGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDP---QAIGAAVRNALVA 60
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP+++ G P S L AA +A E + Q + + E L+I I
Sbjct: 61 LPSAS-----GSSTSQPQASRQLTAAIAQA---------EKEMQQMGDEYVSTEHLLIGI 106
Query: 140 L-DDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
P+ S ++ + G ++ ++ V + S K+ E L+ A
Sbjct: 107 AASKPNQSAEILEKNGVTAASLRKAVPGVRGGAKVTSPDAEGSYKALEKYSTDLTAAAKE 166
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
K LDP+ R++++ VI+ L + K N V++GE VV G+ +I GD
Sbjct: 167 GK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGD 219
Query: 256 VPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFR 313
VP L+ K + L + S + R E E+R++ + N +++ G+ ++ D
Sbjct: 220 VPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQ--IITFIDEIHTIVG 277
Query: 314 ASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
A ++E M+ G ++ + L+G T Y P+LE
Sbjct: 278 AGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALE 322
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + + L K+V QK+ + +++ V + R+G R G F
Sbjct: 550 VGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 604 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 650
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 651 -AAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 709
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 710 DFKNTILIMTS 720
>gi|443893992|dbj|GAC71180.1| chaperone HSP104 and related ATP-dependent Clp proteases
[Pseudozyma antarctica T-34]
Length = 1382
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 127/296 (42%), Gaps = 45/296 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA--------------ASTGLLRTACL 57
T A S V A+ LA+ H QV+P H+A +L +S L ++ C
Sbjct: 470 FTDRAQSSVSAALQLAKDHSHPQVSPAHLALALLTDDTSNSQGVQSTNESSQSLFKSICT 529
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++ + K LE AL ++P+ T P ++S+ + K A
Sbjct: 530 KAG---VDIKILEDKLRTALRKIPSQTPPP------DDISLSSPALKVLKEA-------- 572
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEICSQST 176
ENQ+ I + +++ +++D ++ ++++EAG ++ Q +K+ + QA +
Sbjct: 573 -ENQKSTQRDAYIAQDHILLGLINDNTIKQLLKEAGLANEQLIKTAITQA-------RGG 624
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+KS E+ L++ + SLDP+ R+ ++ + L + K N V++G
Sbjct: 625 RHIDSKSAEAGYDALAKYCTDLTQLAAEGSLDPVIGRDNEIRRAVRVLSRRTKNNAVLIG 684
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFR--HMNRVEVEQRVEEI 288
+V G+ ++ DVP L K L L + R E E+RV+ +
Sbjct: 685 SPGVGKTAIVEGLAQRVVDRDVPPNLLG-KILSLDVGGLMAGAKYRGEYEERVKSV 739
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E L L L K+V Q + V +A + RSG
Sbjct: 1033 VSRMLESEKSKLLRLERTLAKEVIGQDEAVKSVAQAIRLSRSGLADANRPIAS------- 1085
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K +++ LA+ +F S + + I S FS + S +
Sbjct: 1086 --FLFAGSSGSGKTLLSRTLAKCMFDSADAMIRIDCSEFSEKHSISRLIGAPPGYVGHEE 1143
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EAV P + L++++E+A + F ++ GR+ S G +VS + I+I
Sbjct: 1144 GGVL---TEAVRRKPFSIVLLDEIEKASREFVQLFLGVLDEGRLQDSQGRQVSFRNTIII 1200
Query: 778 LS 779
++
Sbjct: 1201 MT 1202
>gi|328871453|gb|EGG19823.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
Length = 892
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + S++ +A LAR + + Q+TP+H+ ++ L +T ++ +E
Sbjct: 6 FTQKTNSILLKAQELAREKENTQLTPIHLFVALIQDEDALAKTIFEKAGG---DFNKIER 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL++ P P + +N+L + A Q+ N LA
Sbjct: 63 AALRALSQFPTQHPPP------NDISPNNSLANILRTAVKLQK-----NNGDSHLA---- 107
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L+ L++++L+D +V ++ +AG QVK+ V++ + +++S ES L
Sbjct: 108 LDHLLVALLEDSTVLSILGDAGAGKEQVKAAVKEV-------RGNKKITSESAESTYEAL 160
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
S+ LDP+ R++++ VI L + K N V++GE VV G+
Sbjct: 161 SKYGHDLVADAQSGKLDPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I +GD+P+ L + + + L + + R E E+R++ + V+ G GI+L + ++
Sbjct: 221 RIVRGDIPDNL-NARVISLDMGALIAGAKYRGEFEERLKAVLKEVKDSNG-GIILFIDEI 278
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V K + + L + L ++V Q + V +A+ V++ ++G R G F
Sbjct: 548 VSKLSQTERQRTLHLADHLHQRVVGQYEAVDAVADAVMRSKAGLARLNQPLGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F + V I +S F S R
Sbjct: 602 ------LFLGPTGVGKTELAKALAYELFDDEKHMVRIDMSEFMEQHSVARLIGAPPG--- 652
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + +EAV P+ V L ++VE+A + ++ GR+ G
Sbjct: 653 ------YVGYDEGGQLSEAVRRKPYSVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGKGKT 706
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 707 VDFSNVVIIMTS 718
>gi|94994743|ref|YP_602841.1| ATP-dependent endopeptidase clp ATP-binding subunit clpE
[Streptococcus pyogenes MGAS10750]
gi|94548251|gb|ABF38297.1| ATP-dependent endopeptidase clp ATP-binding subunit clpE
[Streptococcus pyogenes MGAS10750]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ +IE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRIIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|295690764|ref|YP_003594457.1| ATP-dependent chaperone Clpb [Caulobacter segnis ATCC 21756]
gi|295432667|gb|ADG11839.1| ATP-dependent chaperone ClpB [Caulobacter segnis ATCC 21756]
Length = 859
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 42/284 (14%)
Query: 16 AASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNV 75
A V+ A +LA RGH Q P H+ +L GL R + P Q L+
Sbjct: 10 AKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQ---LDGGVET 66
Query: 76 ALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQ 134
L + P GG P + A K A+ + E+
Sbjct: 67 LLAKTPRVDGA---GGQLYMKPDTARVFAEAEKAAKTSGD-------------AFVTTER 110
Query: 135 LIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV--- 190
L+I+I + +++ +EAG S+ +++ + T S+N + + L
Sbjct: 111 LLIAIAKEGGEAAKLFKEAGVSAQSLETAANA-----VRKGRTADSANAEEGYDALKRYA 165
Query: 191 --LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 166 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+ +I GDVPE+L+D K L L + S R E E+R++ +
Sbjct: 219 LALRIVNGDVPESLKDKKLLSLDMGSLIAGAKYRGEFEERLKAV 262
>gi|209559675|ref|YP_002286147.1| ATP-dependent protease [Streptococcus pyogenes NZ131]
gi|209540876|gb|ACI61452.1| Putative ATP-dependent protease [Streptococcus pyogenes NZ131]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
+ + L + S R + E+R +EEI+N
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|71911053|ref|YP_282603.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pyogenes MGAS5005]
gi|71853835|gb|AAZ51858.1| ATP-dependent clp protease ATP-binding subunit [Streptococcus
pyogenes MGAS5005]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYIGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|319901560|ref|YP_004161288.1| ATP-dependent chaperone ClpB [Bacteroides helcogenes P 36-108]
gi|319416591|gb|ADV43702.1| ATP-dependent chaperone ClpB [Bacteroides helcogenes P 36-108]
Length = 864
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 135/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+H+ +++ A + L + + L
Sbjct: 6 FTIKAQEAVQEAVNLVQSRGQQAIEPVHLLQSVMKAGENVTNFIF---QKLALNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ + LP + GG +N + ++A + + E +
Sbjct: 63 VIDKQIESLPKVS-----GGEAYLSREANEV---LQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L+ S S ++++AG + +++S + + E + + + +S E +
Sbjct: 106 LEPILLALLNVRSTASNILKDAGMTEKELRSAITELRKGEKVTSQSSEDTYQSLEKYAVN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVINEVKKSEGDIILF 274
>gi|15675411|ref|NP_269585.1| ATP-dependent protease [Streptococcus pyogenes SF370]
gi|410680907|ref|YP_006933309.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
pyogenes A20]
gi|13622598|gb|AAK34306.1| putative ATP-dependent protease [Streptococcus pyogenes M1 GAS]
gi|395454294|dbj|BAM30633.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pyogenes M1 476]
gi|409693496|gb|AFV38356.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
pyogenes A20]
Length = 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYIGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVRS 294
+ + L + S R + E+R++++ +R+
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|91978556|ref|YP_571215.1| ATPase [Rhodopseudomonas palustris BisB5]
gi|91685012|gb|ABE41314.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB5]
Length = 879
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 29/300 (9%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T ++ A +LA R GH Q +PLH+ +L S GL ++ + +A+
Sbjct: 7 TERVRGFIQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN---SRAILQS 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIE 131
AL+++P + + G Q ++ A AF A QA ++ G V +E
Sbjct: 64 TEAALSKMPKVSGS----GAGQV-YLAPATARAFDAAEQAAEKAGDS--------FVTVE 110
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L +++ + +++ + G + + S + +T ++ + + L
Sbjct: 111 RLLLALALDRESDAGQLLAKGGVTPQNLNSAINALRKGRTADSATAENAYDALKKYSRDL 170
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 171 TQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 223
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+L+D K L L + + R E E+R++ + + V S G GI+L + ++
Sbjct: 224 RILNGDVPESLKDKKLLSLDLGALIAGAKYRGEFEERLKAVLSEVTSAEG-GIILFIDEM 282
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + + K+V Q + V+ ++ V + R+G R G F
Sbjct: 549 VDKMLEGEKEKLLRMEDQIGKRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA+ +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAQYLFDDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ +++++
Sbjct: 712 NTLIVMTS 719
>gi|452963184|gb|EME68265.1| ATPase with chaperone activity [Magnetospirillum sp. SO-1]
Length = 863
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A TLA R GH ++TP H+A +LA GL + P KAL+ L +
Sbjct: 14 IQSAQTLALRSGHQRLTPEHLAQVLLADKEGLAANLIRAAGGDP--VKALK-GIEAELGK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP P GG P ++ L A Q + G V E L +++
Sbjct: 71 LP-KVEGPGAGGVHLTPELARLLDQAV---QLADKAGDS--------FVTAERLLLALAL 118
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
++V+ EAG + + +E + ++ S + + L+Q A K
Sbjct: 119 ATGTPTAKVLAEAGLTPQGLNHAIEDVRKGRKANSASAEDSYDALKKYARDLTQAARDGK 178
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R+E++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 179 -------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLASRIVNGDVP 231
Query: 258 EALRDVKCLPLSISSF 273
E L++ + + L + +
Sbjct: 232 ETLKNKRLMVLDLGAL 247
>gi|346971213|gb|EGY14665.1| heat shock protein HSP98 [Verticillium dahliae VdLs.17]
Length = 921
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 40/279 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T A V+ AM LA + H+Q+ P+H+A ++L A S + R
Sbjct: 7 FTDRAEKAVQDAMALAEQYAHSQLLPVHLAVSLLDPPADQSKDQQNGPAPSASMFRQVVE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++H P + + +L RLP+ P +++ A ++AQ Q+
Sbjct: 67 RAHGDP---QLFDRALKKSLVRLPSQDPPP------DQVSVAPGFHAVLRKAQELQK--- 114
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEICSQST 176
Q+ +A+ + LI ++ +D ++ +REA + V+ V+Q +
Sbjct: 115 --VQRDSFIAI----DHLITALAEDHNIQTALREANIPKPKLVQDAVQQIRGTKRVDNKN 168
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ + + + TA A + +DP+ R E++ V+ L + K N V++G
Sbjct: 169 ADTEEEHENLAKFTIDMTAMARDSN-----MDPVIGREEEIRRVVRILSRRTKNNPVLIG 223
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E V+ G+ +I DVP+ L+ K L L + +
Sbjct: 224 EPGVGKTTVIEGLAQRIVNRDVPDNLKHCKLLSLDVGAL 262
>gi|407770695|ref|ZP_11118062.1| chaperone clpB [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286269|gb|EKF11758.1| chaperone clpB [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 863
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 32/302 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A +LA R H Q P+H+ +L GL + P A +
Sbjct: 6 FTDRSKGFLQAAQSLALRENHQQFVPIHLLKVLLDDEEGLAANLIKAAGGKP--KTAQDR 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
C L +LP + GG+ Q +S+ +AQ ++ +
Sbjct: 64 CAQ-ELAKLPKVS-----GGNGQI-YLSSDFARLIDQAQEVAKKAGDSY---------VT 107
Query: 132 LEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E+L+++I DP +V+ +AG ++ + + +I T SS ES
Sbjct: 108 AERLLLTIALDPKSVAGKVLADAGLTAQALNGAIN-----DIRKGRTADSSGA--ESQYD 160
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + A + LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 161 ALKKYARDLTAAAREGKLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGL 220
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
+I KGDVPE L+D K L L + + R E E+R++ + + + + G+ IVL +
Sbjct: 221 ALRIVKGDVPETLKDKKLLSLDLGALIAGAKFRGEFEERLKAVMSEIEAEAGQ-IVLFID 279
Query: 306 DL 307
+L
Sbjct: 280 EL 281
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L K+V Q + V I+N V + R+G R G F
Sbjct: 547 VDKMLEGEREKLLGMEDILRKRVVGQDEAVRSISNAVRRARAGLQDPNRPMGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA+ +F V I +S F A +
Sbjct: 601 ------LFLGPTGVGKTELTKALAQFLFDDEQAMVRIDMSEFMEKHAVA-----RLIGAP 649
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 650 PGYVGYEEGGSLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDEGRLTDGQGRTVDFR 709
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 710 NTLIILTS 717
>gi|226505462|ref|NP_001140336.1| uncharacterized protein LOC100272383 [Zea mays]
gi|194699042|gb|ACF83605.1| unknown [Zea mays]
Length = 138
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 721 IERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
++ F EA+ NPHRV LI+ VE Q G ++E+G + G VSL D+IV+ C
Sbjct: 1 MQTFYEAIRENPHRVVLIDGVEHHSKL-QAGIMGSMENGTVRGCDGGVVSLEDSIVVC-C 58
Query: 781 ESFSSRSR---ACSP-PTKQ--KSD-GCEEEKGAAMEGTSPSVSLDLNIC-IDDDSTEDQ 832
E+F SRS + SP P KQ SD + E A +G P SLDLN C IDD E+
Sbjct: 59 EAFESRSLPRVSSSPRPVKQMITSDVDSKVEGDDADKGVVPHFSLDLNTCAIDDGEGEEA 118
Query: 833 S 833
S
Sbjct: 119 S 119
>gi|348680558|gb|EGZ20374.1| hypothetical protein PHYSODRAFT_558773 [Phytophthora sojae]
Length = 894
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 127/295 (43%), Gaps = 30/295 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A +A GH+Q+TPLHVA+ + G + H + +
Sbjct: 6 FTDKTNEYLRNAQDMAEELGHSQLTPLHVAHALFEDRNGTAKRVADLVHGN---VAGFQQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ + +LP+ T P G +ALV K AH+ R +++ +
Sbjct: 63 DVMLQIKKLPSQTPAPDTIG------ADSALVKMLK--YAHKMRKDMKDTH-------LA 107
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ L++++ + V+ +++ QVK V + PV+S S E N L
Sbjct: 108 ADHLLVALYHNSQVASLLKANQMDENQVKDAVAK------MRGGRPVTS-ASAEENYDAL 160
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ +DP+ R+E++ V+ L + K N V++GE +V G+
Sbjct: 161 NKYGQNLIELAEAGKIDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAR 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP++L + K + L + + R E E+R++ + V+ G+ I+
Sbjct: 221 RIVVGDVPDSL-NCKLISLDMGALIAGAKYRGEFEERLKAVLKEVKDSDGKVILF 274
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR---KGKFKDHSEVKEETWLFF 662
+ L L + ++V Q++ V + + VL+ R+G R G F F
Sbjct: 560 GDRLMHLEERIHQRVVGQEEAVKAVCDAVLRSRAGLARSGQPTGSF------------LF 607
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G K ++AK LA +F + V I +S + S YI
Sbjct: 608 LGPTGVGKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIG--------SPPGYIG 659
Query: 723 -----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EAV NP+ V L++++E+A + ++ GR+ S G V + +VI
Sbjct: 660 HEEGGQLTEAVRRNPYNVILMDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFANTVVI 719
Query: 778 LS 779
++
Sbjct: 720 MT 721
>gi|374328354|ref|YP_005078538.1| Chaperonin ClpB [Pseudovibrio sp. FO-BEG1]
gi|359341142|gb|AEV34516.1| Chaperonin ClpB [Pseudovibrio sp. FO-BEG1]
Length = 859
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 32/301 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A T A +GH Q TP H+ +L S G+ +A L + + + + L
Sbjct: 7 TDRARGFIQSAQTYALGQGHQQFTPAHILKVLLDDSEGM--SAGLIERAGG-RVQDVRLQ 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
L LP + GG+ Q ++ F++AQ A + S ++ LLA+ +
Sbjct: 64 IETDLAALPKVS-----GGNGQL-YLAPETARLFEQAQKIAEKAGDSFVTVERLLLALAM 117
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ D + + +AG V N V E+ T S+ S E+
Sbjct: 118 D---------KDSKAGKALSQAG-----VTPNALNEVINELRKGRTADSA--SAENQFDA 161
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A + LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 162 LKKFAQDLTEAAREGKLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+L+D + L L + + R E E+R++ + N V++ G GI+L + +
Sbjct: 222 LRIVNGDVPESLKDKQLLALDMGALIAGAKYRGEFEERLKGVLNEVQAADG-GIILFIDE 280
Query: 307 L 307
+
Sbjct: 281 M 281
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
+ K E E L + + L K+V Q++ V+ ++ V + R+G R G F
Sbjct: 549 IDKMLEGEREKLLRMEDELAKRVVGQQEAVHAVSTAVRRSRAGLQDPNRPIGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V + +S F S R
Sbjct: 603 ------MFLGPTGVGKTELTKALASYLFDDETAMVRVDMSEFMEKHSVARLIGAPPG--- 653
Query: 711 RSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E EAV P++V L ++VE+A + ++ GR+ G
Sbjct: 654 ------YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRT 707
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 708 VDFRNTLIIMTS 719
>gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 28/283 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQC-KALELCFNVALN 78
++ A TLA R GH ++TP H+A +LA GL + P++ KA+E L+
Sbjct: 14 IQNAQTLALRSGHQRLTPEHLAQVLLADKEGLAANLIRAAGGDPIRALKAVETL----LD 69
Query: 79 RLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIIS 138
+LP P GG P ++ L A + A ++ L +
Sbjct: 70 KLP-KVEGPGAGGVHLSPELARLLDQAVQLA----------DKAGDSFVTAERLLLALTL 118
Query: 139 ILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
PS ++ + EAG + + + +E + ++ S + + L+Q A
Sbjct: 119 ATGTPS-AKALAEAGVTPQGLNAAIEDVRKGRKANSASAEDSYDALKKYARDLTQAARDG 177
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
K LDP+ R+E++ I+ L + K N V++GE +V G+ +I GDV
Sbjct: 178 K-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLASRIINGDV 230
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
PE L++ + + L + + R E E+R++ + V + G
Sbjct: 231 PETLKNKRLMVLDLGALVAGAKFRGEFEERLKAVLTEVTAANG 273
>gi|194335404|ref|YP_002017198.1| ATPase AAA [Pelodictyon phaeoclathratiforme BU-1]
gi|194307881|gb|ACF42581.1| AAA ATPase central domain protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 441
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A TLA R H Q+ P H+ M + + A + + L+L
Sbjct: 8 FTLKAQEALQAASTLAASRQHQQIEPEHLLYAMFDDKSSI---AVQIAQKLEASAETLQL 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ + R+P T G + + A K A+ S++++ I
Sbjct: 65 ALDREIERIPRVTGASATGQYIS-QNLGKVFDVALKEAE------SLKDEY-------IS 110
Query: 132 LEQLIISILD-DPSVSRVMREAGF---SSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
E L+I++ + VSR++R+AGF S +V + V S + SQS S N K+ +
Sbjct: 111 SEHLLIAMGEAGIPVSRMLRDAGFNRDSILKVLATVRG--SQRVTSQSAEESYNSLKKYS 168
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ Q LDP+ R+E++ V++ L + K N V++GE +V
Sbjct: 169 RNLNDQARKG--------KLDPVIGRDEEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVE 220
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE L+ + L I+ R E E+R++ + V+S G I+
Sbjct: 221 GIAQRIVAGDVPENLKSKEIAALDIAQLVAGAKFRGEFEERLKAVVREVQSAEGEVILF 279
>gi|385802257|ref|YP_005838660.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis
HMP9231]
gi|333393814|gb|AEF31732.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis
HMP9231]
Length = 864
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRTMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIRAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|159481478|ref|XP_001698806.1| ClpB chaperone, Hsp100 family [Chlamydomonas reinhardtii]
gi|158273517|gb|EDO99306.1| ClpB chaperone, Hsp100 family [Chlamydomonas reinhardtii]
Length = 925
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 37/304 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + +V+ +A+ LA+ HA +TP H+A + GL + A + + A+
Sbjct: 9 TEKVNNVLGEAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKVAGEEVWRSAIR-V 67
Query: 73 FNVALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L +LP P P +S L AA A+ + RG +
Sbjct: 68 LRKRLTKLPKVDPAP----ESVSPGRELSKVLTAA---AKLQKDRGD----------AFL 110
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVK---SNVEQAVSLEICSQSTPVSSNKSKESN 187
+ L+ ++++ VS + EAG S Q++ S V QA P++S ++ ++N
Sbjct: 111 GTDTLLTAVINAAEVSEALGEAGISKAQLETALSEVRQAAG------GGPINS-ETADAN 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ + + R DP+ R++++ V+ L + K N V++GE +V
Sbjct: 164 FDALAKYGTDLTANAARA--DPVIGRDDEIRRVVRVLCRRTKNNPVLIGEPGVGKTAIVE 221
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I K DVPE L+ V+ + L + S R E E+R++ + N V G+ +VL
Sbjct: 222 GLAQRIVKNDVPETLQGVRLISLDMGSLVAGAKYRGEFEERLKAVLNEVAQQQGK-VVLF 280
Query: 304 LGDL 307
+ +L
Sbjct: 281 IDEL 284
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V++ K+ + L SL + L+++V Q V +A+ VL+ R+G R +
Sbjct: 552 VNRLKQTERDKLLSLRSELQQRVVGQDAAVAAVADAVLRSRAGLAARG---------RGS 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSR 713
++LF G K ++AK LA+L+F + I + + S +R +
Sbjct: 603 SFLFL-GPTGVGKTELAKALAQLLFDDEKMMIRIDMGEYMEKHSVSRLIGAPPGYVGHEQ 661
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
Q EAV P+ V L ++VE+A ++ GR+ S G V+ +
Sbjct: 662 GGQ-------LTEAVRRRPYSVVLFDEVEKAHAEVFNVLLSILDDGRVTDSKGRTVNFAN 714
Query: 774 AIVILSC 780
++IL+
Sbjct: 715 TVIILTS 721
>gi|302410733|ref|XP_003003200.1| heat shock protein HSP98 [Verticillium albo-atrum VaMs.102]
gi|261358224|gb|EEY20652.1| heat shock protein HSP98 [Verticillium albo-atrum VaMs.102]
Length = 921
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 40/279 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T A V+ AM LA + H+Q+ P+H+A ++L A S + R
Sbjct: 7 FTDRAEKAVQDAMALAEQYAHSQLLPVHLAVSLLDPPADQSKDQQNGPAPSASMFRQVVE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++H P + + +L RLP+ P +++ A ++AQ Q+
Sbjct: 67 RAHGDP---QLFDRALKKSLVRLPSQDPPP------DQVSVAPGFHAVLRKAQELQK--- 114
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEICSQST 176
Q+ +A+ + LI ++ +D ++ +REA + V+ V+Q +
Sbjct: 115 --VQRDSFIAI----DHLITALAEDHNIQTALREANIPKPKLVQDAVQQIRGTKRVDNKN 168
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ + + + TA A + +DP+ R E++ V+ L + K N V++G
Sbjct: 169 ADTEEEHENLAKFTIDMTAMARDSN-----MDPVIGREEEIRRVVRILSRRTKNNPVLIG 223
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E V+ G+ +I DVP+ L+ K L L + +
Sbjct: 224 EPGVGKTTVIEGLAQRIVNRDVPDNLKHCKLLSLDVGAL 262
>gi|344344157|ref|ZP_08775021.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
gi|343804114|gb|EGV22016.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
Length = 864
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 38/288 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA+ + A +LA R H + P+H+ +L G +R ++ + Q ++
Sbjct: 4 LTAKFQLALADAQSLAVGRDHQFIEPVHLLIALLDQEGGTVRHLLTRADVNVNQLRS--- 60
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK-- 129
L+RLP GG + N L G + NQ L +
Sbjct: 61 ALGELLDRLPVVEGA---GGEVH---VGNDL-------------GRLLNQTDKLAQQRQD 101
Query: 130 --IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E +++ LDD + RV+REAG S ++ +E + ++ E
Sbjct: 102 QYVSSELFVLAALDDRGELGRVLREAGASKGALERAIESVRGGQKVDDPNAEEQRQALEK 161
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R++++ ++ L + K N V++GE +V
Sbjct: 162 YTIDLTERAEQGK-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIV 214
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VPE L+ + L L +++ R E E+R++ + N
Sbjct: 215 EGLAQRIVNGEVPEGLKSRRLLSLDMAALIAGAKFRGEFEERLKAVLN 262
>gi|365898598|ref|ZP_09436548.1| Chaperone [Bradyrhizobium sp. STM 3843]
gi|365420664|emb|CCE09090.1| Chaperone [Bradyrhizobium sp. STM 3843]
Length = 879
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L + GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAMRDGHQQFSPLHLLKVLLDDNEGLASGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--GSIENQQQPLLAVKI 130
ALN+LP + + G Q +S L AF A+ + S ++ LL + +
Sbjct: 64 TEDALNKLPKVSGS----GAGQV-YLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E + ++ + G ++ + + +E +T ++ + +
Sbjct: 119 E---------KNGEAGGILNKGGVTAQNLNAAIESLRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D + L L + + R E E+R++ + V + G I+
Sbjct: 223 LRIINGDVPESLKDKRLLALDLGALIAGAKYRGEFEERLKAVLQEVTAAEGSFILF 278
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + +L K+V Q + V +A V + R+G R G F
Sbjct: 549 VDKMLEGEKEKLLKMEESLGKRVVGQAEAVRAVATAVRRSRAGLQDPNRPIGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|241959204|ref|XP_002422321.1| heat shock protein Hsp104, putative [Candida dubliniensis CD36]
gi|223645666|emb|CAX40327.1| heat shock protein Hsp104, putative [Candida dubliniensis CD36]
Length = 899
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 63/343 (18%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-----ASTGLLRTACLQSHSHPL 64
+ T A ++ A LA+++ ++Q+ PLH + ST L+T ++
Sbjct: 2 EDFTDNAIKIINNATELAKQQANSQLLPLHFLAAFIPSDDTEGSTQYLKTLIKRAR---Y 58
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQP 124
+ E N L ++P+ + P + + +++ Q + I+ QQ+
Sbjct: 59 EWGDFERIVNRHLVKIPSQSPPP------------DEIRPSYQAGQVLTKANKIKQQQKD 106
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ + +++++L+D S+ + +EAG S +K+ QA+ L S + S ++
Sbjct: 107 SYVAQ---DHILLALLEDQSIKDIFKEAGMSVDTIKT---QAIELR---GSQRIDSRQAD 157
Query: 185 ESNVLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
S+ K R +DP+ R E++ VI L + K N V++G+
Sbjct: 158 SSSSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLIGDAGVGKT 217
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR--------------- 284
+V GV +I GDVP L + L + + + E E+R
Sbjct: 218 SIVEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNEIEKSKEFI 277
Query: 285 ---VEEI-----------KNLVRSCLGRGIVLNLGDLEWAEFR 313
++EI NL++ L RG + +G +AE+R
Sbjct: 278 ILFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 320
>gi|14335454|gb|AAK60625.1|AF362390_1 heat shock protein Hsp104 [Candida albicans]
Length = 899
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 139/343 (40%), Gaps = 63/343 (18%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-----ASTGLLRTACLQSHSHPL 64
+ T A ++ A LA+++ ++Q+ PLH + ST L+T ++
Sbjct: 2 EDFTDNAIKIINNATELAKQQANSQLVPLHFLAAFIPSDDTEGSTQYLKTLVKRAR---Y 58
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQP 124
+ E N L ++P+ P + + +++ Q + I+ QQ+
Sbjct: 59 EWGDFERIVNRHLVKIPSQNPPP------------DEIRPSYQAGQVLTKANKIKQQQKD 106
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ + +++++L+D S+ + +EAG S +K+ QA+ L S + S ++
Sbjct: 107 SYVAQ---DHILLALLEDQSIKDIFKEAGMSVDTIKT---QAIELR---GSQRIDSRQAD 157
Query: 185 ESNVLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
S+ K R +DP+ R E++ VI L + K N V++G+
Sbjct: 158 SSSSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLIGDAGVGKT 217
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR--------------- 284
+V GV +I GDVP L + L + + + E E+R
Sbjct: 218 SIVEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNEIEKSKEFI 277
Query: 285 ---VEEI-----------KNLVRSCLGRGIVLNLGDLEWAEFR 313
++EI NL++ L RG + +G +AE+R
Sbjct: 278 ILFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 320
>gi|415704682|ref|ZP_11459953.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 75712]
gi|388051404|gb|EIK74428.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 75712]
Length = 864
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRTMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|397667476|ref|YP_006509013.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395130887|emb|CCD09136.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQMALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + T GG +SNAL + + QR+ + + +
Sbjct: 57 IPLLRTLIDQALDKLPKVSGT---GGDIH---VSNALNRLLNLTDKLSQQRKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I +D ++++++++AG + ++ +++ E + ++
Sbjct: 111 FVLA----------AINEDSNLAKILKQAGGDNKAIEKAIDELRGGETVNDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKGVLN 264
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL ++ Q + V ++N + + R+G R G F
Sbjct: 548 VSKMMEGEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|417555953|ref|ZP_12207015.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 315-A]
gi|333603276|gb|EGL14694.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 315-A]
Length = 864
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRTMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|103487872|ref|YP_617433.1| ATPase [Sphingopyxis alaskensis RB2256]
gi|98977949|gb|ABF54100.1| ATPase AAA-2 [Sphingopyxis alaskensis RB2256]
Length = 859
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 132/297 (44%), Gaps = 29/297 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H +++P H+A +L S G+ A L ++S +A+
Sbjct: 6 FTDRAKGFLQAAQTIAIRMNHQRISPEHIAKALLEDSQGM--AAGLIANSGGDTARAVA- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L +LPA + + G P + N V +A+ + E +
Sbjct: 63 GIDALLAKLPAVSGS----GAQATPGLDNDAVRLLDQAEQVAAKAGSEY---------VA 109
Query: 132 LEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
++ ++++++ PS V + +AG S+ + + + + ++ +
Sbjct: 110 VQNILLAMVLAPSTPVGKAFADAGVSADALNAAIAKLTGGRTADTASAEDRYDALRKFAR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R+E++ ++ L + K N V++GE + G+
Sbjct: 170 DLTEVAREGK-------LDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP++L+D + L L + + R E E+R++ + + V++ G I+
Sbjct: 223 ALRIVNGDVPDSLKDRRLLALDMGALIAGAKYRGEFEERLKGVLDDVKAAEGEIILF 279
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + L ++V Q + V ++ V + R+G R G F
Sbjct: 549 VDRMMEGEREKLLKMEETLTQRVIGQDEAVRAVSTAVRRARAGLQDPNRPLGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F N V I +S + + +
Sbjct: 603 ------LFLGPTGVGKTELTKALARFLFDDDNAMVRIDMSEYMEKHSVA-----RLVGAP 651
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 652 PGYVGYEEGGTLTEAVRRRPYQVVLFDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVDFT 711
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
+ ++IL+ + S++ A P GA +E P+V
Sbjct: 712 NTLIILTS-NLGSQAIAALP------------DGAPVEQAEPAV 742
>gi|415703742|ref|ZP_11459493.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|388051048|gb|EIK74073.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
Length = 864
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRTMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIRAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|238756475|ref|ZP_04617782.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
gi|238705324|gb|EEP97734.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
Length = 857
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + A +LA R + + PLH+ + +L G +R S + L
Sbjct: 6 LTSKFQLALADAQSLALGRDNQFIEPLHLMSALLTQDGGTVRPLL---TSAGIDVARLRT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL RLP T GG Q P+ V A +R I
Sbjct: 63 EIDQALGRLPQVEGT---GGDVQ-PSHELVRVLNLCDKLAQKRADKF-----------IS 107
Query: 132 LEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E I+++L+D S++ +++ AG ++ ++ +EQ + + ++ + +
Sbjct: 108 SELFILAVLEDRGSLTDLLKAAGATADKISKAIEQMRGGDTVDDAGAEDQRQALKKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VPE L+ + L L + + R E E+R++ + N
Sbjct: 221 QRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLKGVLN 264
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 26/201 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E + L + L K+V Q + V ++N + + R+G R G F
Sbjct: 548 VSRMLESERDKLLRMEQDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC--------ESFSSRS 787
+VI++ E F RS
Sbjct: 713 VVIMTSNLGSDLIQERFGERS 733
>gi|358448455|ref|ZP_09158958.1| ATPase [Marinobacter manganoxydans MnI7-9]
gi|357227243|gb|EHJ05705.1| ATPase [Marinobacter manganoxydans MnI7-9]
Length = 858
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + + A ++A + H + P+H+ +L ++ Q+ + P + +
Sbjct: 6 LTSKLQTALADAQSIAVGKDHNFIEPVHLMQALLDQEGSAIKPLLKQAGAEPGRIRQ--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
A+ R + P + G ++SN + F A A +R+ + + LLA
Sbjct: 63 ----AIAR--EIENLPEVQGSAGDVSMSNDMGRLFNIADKLAQKRKDQYISSELMLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
++ D ++ RV+RE G ++ ++ E + ++ + ++ +
Sbjct: 115 --------ALEDRGTLGRVLREQGVDKAALEKAIDDVRGGEAVNDASAEENRQALSKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A A K LDP+ R++++ I+ L +RK N V++GE +V G+
Sbjct: 167 DLTERAEAGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VP+ L+D K L L + + R E E+R++ + N
Sbjct: 220 AQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL +V Q + V ++N V + R+G R G F
Sbjct: 548 VSKMLEGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|415711243|ref|ZP_11464056.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 55152]
gi|388058554|gb|EIK81344.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 55152]
Length = 864
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|91783442|ref|YP_558648.1| heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385209766|ref|ZP_10036634.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
gi|91687396|gb|ABE30596.1| Heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
gi|385182104|gb|EIF31380.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
Length = 865
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+HV + ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLSALVAQQDGSARSLLSRAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP T G+ Q I L +A + + Q L I
Sbjct: 63 ALGDAITRLPQVQGTD---GNVQ---IGRDLTGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ R+ G S ++S + S ++ + +
Sbjct: 108 SEMFLLAVADDKGEAGRLARQHGLSRKSLESAIAAVRGGSQVHSQDAESQREALKKYTVD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 221 QRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|380513637|ref|ZP_09857044.1| ATP-dependent clp protease subunit protein [Xanthomonas sacchari
NCPPB 4393]
Length = 861
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 118/284 (41%), Gaps = 30/284 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ + A +LA R H + P+HV +L + G R Q+ + L
Sbjct: 6 LTSRFQQALADAQSLAVGRDHTIIEPVHVFVALLDQAGGSTRPLLAQAG---VNVPVLRE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL++LP + P G +S L K AQ H N Q I
Sbjct: 63 RLGEALDKLPKVSGQP--GNVSMGNDLSRLLNQTDKLAQQH-------NDQ------FIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ DD + +R AG +++S +++ E ++ E +
Sbjct: 108 SEWFVLAAADDGGPLGLALRAAGADKKKLESAIDKLRGGETVQSENAEEQRQALEKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A + K LDP+ R+E++ ++ L + K N V++GE +V G+
Sbjct: 168 LTARAESGK-------LDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VPE LR + L L + + R E E+R++ + N
Sbjct: 221 QRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V+K E + L + + L ++V Q++ + +++ V + R+G R G F
Sbjct: 548 VNKMLEGERDKLLRMEDELHQRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + + I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAEFLFDSSDAMIRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ + L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSLILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|145592687|ref|YP_001156984.1| ATPase [Salinispora tropica CNB-440]
gi|145302024|gb|ABP52606.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 863
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
LT ++ + A+TLA +RGHA V P H+ ++L + + GLLR + + P
Sbjct: 6 LTTKSREAITGAVTLAGQRGHATVEPWHLLLSLLDTEGSTTVGLLRA----TGADP---D 58
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L A+ LP + G PT++ V A G+ E +PL
Sbjct: 59 DLRRAAERAVAALPVAR-----GSSVAEPTLAREFVNAI---------GAAEQIARPLGD 104
Query: 128 VKIELEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
E L+ + +VS +R AG + + S ++ E
Sbjct: 105 EYTSTEHLLAGLAQVGGAVSAALRTAGVTEEAL------VASFPTVRGGDRRVTSADPEQ 158
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L++ S +DP+ R+ ++ VI+ L + K N V++GE +V
Sbjct: 159 TYQALAKYGVDLTASARDGRIDPVIGRDTEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIV 218
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSI------SSFRHMNRVEVEQRVEEIKN 290
G+ +I GDVPE+LRD K + L + +S+R ++ +EEIKN
Sbjct: 219 EGLAQRIVAGDVPESLRDKKLVSLDLGAMVAGASYRGQFEERLKSVLEEIKN 270
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 22/207 (10%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
+ E + L + +L ++V Q V +A+ V + R+G R G F
Sbjct: 555 RLLEGETAKLLRMEESLGEQVVGQARAVGAVADAVRRARAGIADPDRPTGSF-------- 606
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K ++AK LA +F V I +S + + +
Sbjct: 607 ----LFLGPTGVGKTELAKALAGFLFDDERAMVRIDMSEYGEKHSVA-----RLVGAPPG 657
Query: 717 SCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y E + EAV P+ V L+++VE+A + ++ GR+ G V +A
Sbjct: 658 YVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDLLLQVLDDGRLTDGQGRTVDFRNA 717
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGC 801
I+IL+ SS + P +Q+ +G
Sbjct: 718 ILILTSNLGSSMVGDLTVPEEQRREGV 744
>gi|225012799|ref|ZP_03703233.1| ATP-dependent chaperone ClpB [Flavobacteria bacterium MS024-2A]
gi|225003073|gb|EEG41049.1| ATP-dependent chaperone ClpB [Flavobacteria bacterium MS024-2A]
Length = 905
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 119/268 (44%), Gaps = 36/268 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ VV+ A LA RGH ++ H+ ++ +L P K L+L
Sbjct: 45 LTLKSQEVVQAAQQLAFERGHQEIENEHLFQGLIEVDDNVL----------PYLFKKLQL 94
Query: 72 CFNVA--LNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ LN + + + GG QF P S L++A A+ Q+ +A
Sbjct: 95 NLTLVKQLNESILKSFSKVEGGQQQFSPKASQTLLSAINNAK---------QQKDEYVAT 145
Query: 129 KIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
E L +++ + S V +++++ G + +++ +++ E + ++ + S E
Sbjct: 146 ----EHLFMAVFESNSKVGKMLKDQGVTKKDLEAAIKELRKGEKVTSASAEGNFNSLEKY 201
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ A K LDP+ R+E++ +++ L + K N ++VGE +
Sbjct: 202 AKNLNKLAEEGK-------LDPVIGRDEEIRRLLQILTRRTKNNPILVGEPGTGKTAIAE 254
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I GDVPE L+D + L + +
Sbjct: 255 GLAHRIIDGDVPENLKDKQIFALDMGAL 282
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + E L L + L +++ Q+ V +++ V + R+G R G F
Sbjct: 585 VSKMLQTDKEKLLRLEDQLHQRLVGQEKAVEAVSDAVRRSRAGLQDQNRPIGSF------ 638
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA ++F NN I +S + A S
Sbjct: 639 ------LFLGTTGVGKTELAKALADVLFDDENNITRIDMSEYQERHAVS-----RLVGAP 687
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L++++E+A + + ++ GR+ + G
Sbjct: 688 PGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDTFNVLLQVLDEGRLTDNKGRLTDFK 747
Query: 773 DAIVILSC 780
++I+I++
Sbjct: 748 NSIIIMTS 755
>gi|385330270|ref|YP_005884221.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
gi|311693420|gb|ADP96293.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
Length = 858
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + + A ++A + H + P+H+ +L ++ Q+ + P + +
Sbjct: 6 LTSKLQTALADAQSIAVGKDHNFIEPVHLMQALLDQEGSAIKPLLKQAGAEPGRIRQ--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
A+ R + P + G ++SN + F A A +R+ + + LLA
Sbjct: 63 ----AIAR--EIENLPEVQGSAGDVSMSNDMGRLFNIADKLAQKRKDQYISSELMLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
++ D ++ RV+RE G ++ ++ E + ++ + ++ +
Sbjct: 115 --------ALEDRGTLGRVLREQGVDKAALEKAIDDVRGGEAVNDASAEENRQALSKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A A K LDP+ R++++ I+ L +RK N V++GE +V G+
Sbjct: 167 DLTERAEAGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VP+ L+D K L L + + R E E+R++ + N
Sbjct: 220 AQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL +V Q + V ++N V + R+G R G F
Sbjct: 548 VSKMLEGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|162456450|ref|YP_001618817.1| ABC transporter ATPase [Sorangium cellulosum So ce56]
gi|161167032|emb|CAN98337.1| ATPase with chaperone activity, two ATP-bindingdomains [Sorangium
cellulosum So ce56]
Length = 869
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 34/302 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T +A ++ A+ RRG+ ++ P H+ +++ G+ PL KA
Sbjct: 6 MTTKAQEAIRDAVDFGSRRGNPELYPEHLVRAIVSQDGGV---------GAPLVQKAGAD 56
Query: 72 CFNVALNRLPASTST-PMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
V L L A T P + G + P +S + ++A E++ + L I
Sbjct: 57 PAGV-LRLLDAKIDTYPRVSGGAE-PNLSRRALTVLQKA---------EDEAKALKDEYI 105
Query: 131 ELEQLIIS-ILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E ++++ I D + + AG S ++ S++ + + P ++ E
Sbjct: 106 STEHVLLAGIKADKEIQSIFERAGLSYDKLLSSLAAVRGNQRVTDRDPEGKFQALEKYTR 165
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K+ DP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 166 DLTKLARQGKI-------DPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGI 218
Query: 248 IDKIEKGDVPEALRD--VKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
+I GDVPE+L+D + L L+ R E E R++ + + GR I+L +
Sbjct: 219 AQRIVAGDVPESLKDKTIAALDLAAMVAGSKFRGEFEDRLKAVLKEIEGSNGR-IILFID 277
Query: 306 DL 307
+L
Sbjct: 278 EL 279
>gi|254292513|ref|YP_003058536.1| ATP-dependent chaperone ClpB [Hirschia baltica ATCC 49814]
gi|254041044|gb|ACT57839.1| ATP-dependent chaperone ClpB [Hirschia baltica ATCC 49814]
Length = 873
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 31/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A +++ A T A GH Q++ H+ + S L + HP Q + L
Sbjct: 6 FTDRARTLLGTAQTSAVAAGHQQLSSEHILKALFEESDQLSANLMRAAGGHPEQAQQLN- 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
ALN +P T + G Q +I+ A +Q ++ +
Sbjct: 65 --EQALNTIPKVTGS----GVGQL-SINQGAAAVLTTSQTDAQKAGDSF---------VT 108
Query: 132 LEQLIISIL--DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+E+L+++I +D + S ++ AG ++ +++ VE Q S ++ES
Sbjct: 109 VERLLVAIAKGNDKAAS-ALKTAGVTAKALETAVEN------LRQGRKADSANAEES-YE 160
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
LS+ A+ + LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 161 ALSKYATDLTDAARAGKLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGL 220
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
++I GDVP++LRD + L L + + R E E+R++ + V S G+ I+
Sbjct: 221 ANRIVDGDVPDSLRDKRLLSLDMGALIAGAKYRGEFEERLKAVLTEVTSAHGQIILF 277
>gi|239607132|gb|EEQ84119.1| heat shock protein CLPA [Ajellomyces dermatitidis ER-3]
Length = 927
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 45/284 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L ++S L
Sbjct: 6 LTDRANKALVDAHALAEQHAHPQLLPIHLAVSLLDPPPDESKDQQVTTHPSHQSSSASLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH 112
+ ++H P Q L N +L RLP+ P P IS + +A ++
Sbjct: 66 KRVVEKAHGDPQQ---LGRSLNRSLVRLPSQDPPPETVAPS--PAISKVIRSATNLSK-- 118
Query: 113 QRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEI 171
Q+ +A+ + LI ++ DP++ R + +A + + + S ++Q ++
Sbjct: 119 -------TQKDSYVAI----DHLIAALAHDPTIQRALADANIPNVKMIDSAIQQIRGMKR 167
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
T + +S+ + T+ A + +DP+ R E++ VI L + K N
Sbjct: 168 VDSKTADTEEESENLKKFTIDMTSMAREGK-----IDPVIGREEEIRRVIRILSRRTKNN 222
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
V++GE VV G+ +I DVP L + K L L + S
Sbjct: 223 PVLIGEPGVGKTTVVEGLARRIVNADVPANLSNCKLLSLDVGSL 266
>gi|301097499|ref|XP_002897844.1| heat shock protein 101 [Phytophthora infestans T30-4]
gi|262106592|gb|EEY64644.1| heat shock protein 101 [Phytophthora infestans T30-4]
Length = 895
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 42/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A +A GH+Q+TPLHVA + G + H + +
Sbjct: 6 FTDKTNEYLRNAQDMAEELGHSQLTPLHVAYALFDDHNGTAKRVAELVHGN---VAGFKQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L +LP T P G +AL+ K AH+ R +++ +
Sbjct: 63 DVMLQLKKLPKQTPAPESVG------ADSALMKMLK--YAHKMRKDMKDTH-------LA 107
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV- 190
+ L++++ ++ V+ +++ QVK V++ PV+S ++E+ +
Sbjct: 108 ADHLVVALYNNSQVAGLLKSNQMDENQVKDAVQK------IRGGRPVTSAAAEENYDALN 161
Query: 191 -----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L + A A K+ DP+ R+E++ VI L + K N V++GE +
Sbjct: 162 KYGQNLIELAEAGKI-------DPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAI 214
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP++L + K + L + + R E E+R++ + V+ G+ I+
Sbjct: 215 VEGLARRIVVGDVPDSL-NCKLVSLDMGALIAGAKYRGEFEERLKAVLKEVKDSDGKIIL 273
Query: 302 L 302
Sbjct: 274 F 274
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 18/177 (10%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRR---KGKFKDHSEVKEETWLFF 662
+ L L L K+V Q + V + + VL+ R+G R G F F
Sbjct: 560 GDRLMHLDERLHKRVVGQDEAVKAVCDAVLRSRAGLARSGQPTGSF------------LF 607
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G K ++AK LA +F + V I +S + S Q
Sbjct: 608 LGPTGVGKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGAPPGFVGYQESG--- 664
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+ EAV NP+ V L++++E+A + ++ GR+ S G V + ++I++
Sbjct: 665 QLTEAVRRNPYNVVLLDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFANTVIIMT 721
>gi|68479564|ref|XP_716146.1| hypothetical protein CaO19.13747 [Candida albicans SC5314]
gi|46437803|gb|EAK97143.1| hypothetical protein CaO19.13747 [Candida albicans SC5314]
gi|238880223|gb|EEQ43861.1| heat shock protein 104 [Candida albicans WO-1]
Length = 899
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 139/343 (40%), Gaps = 63/343 (18%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-----ASTGLLRTACLQSHSHPL 64
+ T A ++ A LA+++ ++Q+ PLH + ST L+T ++
Sbjct: 2 EDFTDNAIKIINNATELAKQQANSQLLPLHFLAAFIPSDDTEGSTQYLKTLVKRAR---Y 58
Query: 65 QCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQP 124
+ E N L ++P+ P + + +++ Q + I+ QQ+
Sbjct: 59 EWGDFERIVNRHLVKIPSQNPPP------------DEIRPSYQAGQVLTKANKIKQQQKD 106
Query: 125 LLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ + +++++L+D S+ + +EAG S +K+ QA+ L S + S ++
Sbjct: 107 SYVAQ---DHILLALLEDQSIKDIFKEAGMSVDTIKT---QAIELR---GSQRIDSRQAD 157
Query: 185 ESNVLVLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
S+ K R +DP+ R E++ VI L + K N V++G+
Sbjct: 158 SSSSYEFLNKYCEDFTEKAREGKIDPVIGREEEIRRVIRVLARRSKSNSVLIGDAGVGKT 217
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR--------------- 284
+V GV +I GDVP L + L + + + E E+R
Sbjct: 218 SIVEGVAQRIVDGDVPNVLAGSRLFALDLGALTAGAKYKGEFEERLKGVLNEIEKSKEFI 277
Query: 285 ---VEEI-----------KNLVRSCLGRGIVLNLGDLEWAEFR 313
++EI NL++ L RG + +G +AE+R
Sbjct: 278 ILFIDEIHMLMGDGKSDAANLLKPMLARGALHCIGATTFAEYR 320
>gi|261201039|ref|XP_002626920.1| heat shock protein CLPA [Ajellomyces dermatitidis SLH14081]
gi|239593992|gb|EEQ76573.1| heat shock protein CLPA [Ajellomyces dermatitidis SLH14081]
gi|327351085|gb|EGE79942.1| heat shock protein ClpA [Ajellomyces dermatitidis ATCC 18188]
Length = 927
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 45/284 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L ++S L
Sbjct: 6 LTDRANKALVDAHALAEQHAHPQLLPIHLAVSLLDPPPDESKDQQVTTHPSHQSSSASLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH 112
+ ++H P Q L N +L RLP+ P P IS + +A ++
Sbjct: 66 KRVVEKAHGDPQQ---LGRSLNRSLVRLPSQDPPPETVAPS--PAISKVIRSATNLSK-- 118
Query: 113 QRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEI 171
Q+ +A+ + LI ++ DP++ R + +A + + + S ++Q ++
Sbjct: 119 -------TQKDSYVAI----DHLIAALAHDPTIQRALADANIPNVKMIDSAIQQIRGMKR 167
Query: 172 CSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
T + +S+ + T+ A + +DP+ R E++ VI L + K N
Sbjct: 168 VDSKTADTEEESENLKKFTIDMTSMAREGK-----IDPVIGREEEIRRVIRILSRRTKNN 222
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
V++GE VV G+ +I DVP L + K L L + S
Sbjct: 223 PVLIGEPGVGKTTVVEGLARRIVNADVPANLSNCKLLSLDVGSL 266
>gi|377821024|ref|YP_004977395.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
gi|357935859|gb|AET89418.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
Length = 865
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+H+ ++A G R+ L SH+ +Q +AL+
Sbjct: 6 LTTKFQEALSDAQSLAVGHDNQYIEPVHLLAALIAQQDGSARS--LLSHAG-VQVQALQA 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N A+ RLP T G+ Q +S L A + + Q L I
Sbjct: 63 SLNDAIARLPQVQGTD---GNVQ---VSRELAGLLNAA---------DKEAQKLNDTYIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAV--SLEICSQSTPVSSNKSKESNV 188
E +I++ DD R+ ++ G + +++ + AV +I SQ S ++ +
Sbjct: 108 SEMFLIAVADDRGEAGRLGKQHGLTRKALEAAI-NAVRGGAQIDSQDAE-SQREALKKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 166 VDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE L+ + L L +++ R E E+R++ + N + G IV
Sbjct: 219 LAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGMTIVF 276
>gi|254472239|ref|ZP_05085639.1| ATP-dependent chaperone ClpB [Pseudovibrio sp. JE062]
gi|211958522|gb|EEA93722.1| ATP-dependent chaperone ClpB [Pseudovibrio sp. JE062]
Length = 859
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 133/301 (44%), Gaps = 32/301 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A T A +GH Q TP H+ +L S G+ A L + + + + L
Sbjct: 7 TDRARGFIQSAQTYALGQGHQQFTPAHILKVLLDDSEGM--AAGLIERAGG-RVQDVRLQ 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKI 130
L LP + GG+ Q ++ F++AQ A + S ++ LLA+ +
Sbjct: 64 IETDLAALPKVS-----GGNGQL-YLAPETARLFEQAQKIAEKAGDSFVTVERLLLALAM 117
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ D + + +AG V N V E+ T S+ S E+
Sbjct: 118 D---------KDSKAGKALAQAG-----VTPNALNEVINELRKGRTADSA--SAENQFDA 161
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A + LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 162 LKKFAQDLTEAAREGKLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+L+D + L L + + R E E+R++ + N V++ G GI+L + +
Sbjct: 222 LRIVNGDVPESLKDKQLLALDMGALIAGAKYRGEFEERLKGVLNEVQAADG-GIILFIDE 280
Query: 307 L 307
+
Sbjct: 281 M 281
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
+ K E E L + + L K+V Q++ V+ ++ V + R+G R G F
Sbjct: 549 IDKMLEGEREKLLRMEDELAKRVVGQQEAVHAVSTAVRRSRAGLQDPNRPIGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V + +S F S R
Sbjct: 603 ------MFLGPTGVGKTELTKALASYLFDDETAMVRVDMSEFMEKHSVARLIGAPPG--- 653
Query: 711 RSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E EAV P++V L ++VE+A + ++ GR+ G
Sbjct: 654 ------YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRT 707
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 708 VDFRNTLIIMTS 719
>gi|88799109|ref|ZP_01114689.1| putative ATPase subunit of ATP-dependent protease [Reinekea
blandensis MED297]
gi|88778092|gb|EAR09287.1| putative ATPase subunit of ATP-dependent protease [Reinekea sp.
MED297]
Length = 923
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 35/301 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
L A+ +++ A A RGH Q+T H+ LL+ L L A+
Sbjct: 13 LNADCGVMMEAAAGFAASRGHYQITVEHL----------LLK---LLEDDRRLHIDAIVA 59
Query: 72 CFNVALNRL---PASTSTPMLGGHCQFPTISNALVAAFKRA----QAHQRRGSIENQQQP 124
FNV ++RL + + H P IS+AL ++A H R I++
Sbjct: 60 YFNVDVDRLWQAMIESVNALRSDHQGKPGISDALFQTLEKAVLINTVHYGRDDIDSA--A 117
Query: 125 LLAVKIELEQLIISILD----DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSS 180
LL IEL ++ DP V +R+ S Q ++VE S + ++S S+
Sbjct: 118 LLEAIIELAPVVPGFSGFRELDPIVLEELRQHRLSICQ--ASVEGVQSQGVKARSLKQSA 175
Query: 181 NKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLA 238
+ ES L+Q + +DPI R+E++ I+ L +RK N ++VGE
Sbjct: 176 SPEAES---ALAQFTTDLTERAASDDMDPITGRHEEIRMAIDILCRRRKNNPILVGEPGV 232
Query: 239 SIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCL 296
VV G+ K+ +G+VP L++++ L + + V E E+R++ + + VR
Sbjct: 233 GKTAVVEGLAQKVVRGEVPALLQNIRIHVLDMGLLQAGAGVKGEFERRLKAVIDEVRDAA 292
Query: 297 G 297
G
Sbjct: 293 G 293
>gi|163846611|ref|YP_001634655.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222524408|ref|YP_002568879.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163667900|gb|ABY34266.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222448287|gb|ACM52553.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 826
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 135/304 (44%), Gaps = 33/304 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A + A + + H+Q+ H+ ML GL A + + P + E
Sbjct: 6 FTEKAQNAFHIAQEIMQEHQHSQLDVEHLFLAMLRQRDGLAARALARLNVDPHEV---ER 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L +LP S +G + LV KRA+ R L +
Sbjct: 63 RVERELEKLPKILSPYGMGSQVYITPRTQRLV---KRAEEEANR---------LGDQYVG 110
Query: 132 LEQLIISIL---DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
L+ L+I + D PS +R++ S Q+ V +EI + + S + S ES
Sbjct: 111 LDHLLIGLANERDGPS-ARIL-----QSYQIDQERIYQVLMEI--RGSQRSDDPSAESRY 162
Query: 189 LVLSQ-TASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+LS+ + T++++ LDP+ R ++ VI L + K N V+VGE +V
Sbjct: 163 EILSKYSVDLTELARED-KLDPVIGREAEITRVIRILSRRTKNNPVLVGETGVGKTAIVE 221
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I +GDVP LRD K L L ++ + R E E+R++ + + VR+ GR I+L
Sbjct: 222 GLAQRIARGDVPPTLRDRKLLALDLAGMVAGSKFRGEFEERLKAVMDEVRNAKGR-IILF 280
Query: 304 LGDL 307
+ +L
Sbjct: 281 IDEL 284
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + L ++V Q + + +++ + + RSG R G F
Sbjct: 490 VSRMLETEREKLIHMEERLHERVIGQHEAIVALSDAIRRARSGLRDPRRPIGSF------ 543
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++A+ LA +F S + +S + R+ SR
Sbjct: 544 ------LFVGPTGVGKTELARALAEFMFDSEEAMTRVDMSEYQE---------RHTVSRL 588
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E++ P++V L +++E+A + ++ GR+ G
Sbjct: 589 IGAPPGYVGYDEGGQLTESIRRRPYQVVLFDEIEKAHRDVFNALLQVLDDGRLTDGQGRT 648
Query: 769 VSLGDAIVILSC 780
V + I+I++
Sbjct: 649 VDFRNTIIIMTS 660
>gi|119476932|ref|ZP_01617213.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2143]
gi|119449739|gb|EAW30976.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
proteobacterium HTCC2143]
Length = 860
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 31/301 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + + A +LA + H + PLH+ + +L G ++ Q+ + AL+
Sbjct: 6 FTNQLQNALSDAQSLAVGKDHNSIDPLHLLSALLDQVNGSVQPLMRQAGGN---IPALKD 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A++ LP + T G +SN L A + Q Q +
Sbjct: 63 TLGQAMSNLPTVSGTV---GDIH---MSNDLARVLNLA---------DKQSQQNNDAYLS 107
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E + +++LD + +VS+++ ++G S + S +E E + + ++ + +
Sbjct: 108 CEVVAMALLDANIAVSKLLTDSGVSKQALGSAIESVRGGEAVNDPAAEENRQALDKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I G+VPE L+D + L L + S R E E+R++ + N + GR I+L + +
Sbjct: 221 QRIVNGEVPEGLKDKRVLSLDLGSLLAGAKFRGEFEERLKAVLNELSKQEGR-IILFIDE 279
Query: 307 L 307
L
Sbjct: 280 L 280
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + +L+K+V Q + V ++N V + R+G R G F
Sbjct: 548 VSKMLEGERDKLLRMEESLQKRVIGQSEAVISVSNAVRRSRAGLSDPNRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAMFLFDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|335425025|ref|ZP_08554016.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
gi|334886701|gb|EGM25048.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
Length = 861
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ S + +A +LA R H ++ P+HV +L G +R PL A
Sbjct: 4 LTSKLQSALGEAQSLAVGRDHNEIQPVHVLLALLDTEGGTVR---------PLLDGAGLD 54
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
++ L A + P +G S ALV + + Q+RG I
Sbjct: 55 VRDIRNRLLKALDNLPTVGEATGDVGASQALVRVLNLSDKLAQKRGD----------SFI 104
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++ L+D S +++ AG + ++ + +++ E + + + +
Sbjct: 105 SSELFVLAALEDKSEAGTILKNAGATRDKLTAQIDKIRGGENVDDANAEEQRGALDKYTI 164
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R+E++ VI+ L + K N +VGE +V G+
Sbjct: 165 DLTERAEQGK-------LDPVIGRDEEIRRVIQVLSRRTKNNPTLVGEPGVGKTAIVEGL 217
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE+LRD + L L +
Sbjct: 218 AQRIINGEVPESLRDKRVLVLDLGGM 243
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V++ E + L + ++L ++V Q + V +++ + + RSG R G F
Sbjct: 548 VNRMLEAERDKLLRMEDSLHERVIGQNEAVSAVSDAIRRSRSGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K +A +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSIATFLFDTESAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEQGGYL---TEAVRRKPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|219847263|ref|YP_002461696.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485]
gi|219541522|gb|ACL23260.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485]
Length = 861
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
Query: 29 RRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPM 88
R G+A+V P H+ +L S G++ + + L A++ N + R P TS
Sbjct: 25 RLGNAEVQPEHLLYALLDQSDGVVPKVLAKLN---LPVGAIKQQINNEIARFPRITS--- 78
Query: 89 LGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDP--SVS 146
G Q S K AH ++ + E L+++ILD +
Sbjct: 79 --GSVQVQLGSRLRTVLVK---AHDELAQFGDEY-------VSTEHLLLAILDHAGGAAE 126
Query: 147 RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVS 206
RV+++AG + ++ + + + + P + + E L++ A+ K
Sbjct: 127 RVLKQAGLTRDKLLMALREVRGAQRVTSPNPEGTYAALEQYGRDLTELAARNK------- 179
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ VI+ L + K N V++GE +V G+ +I +GDVPE+L++ +
Sbjct: 180 LDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESLKNKR 239
Query: 265 CLPLSISSF 273
+ L + +
Sbjct: 240 VIALDLGAL 248
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 34/219 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L ++V Q + V +AN V + R+G R G F
Sbjct: 550 VTKLLEGELEKLVHMEERLHQRVVGQDEAVTAVANAVRRARAGLQDPNRPLGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++A+ LA +F V I +S + S R
Sbjct: 604 ------LFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHSVARLIGAPPG--- 654
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GR+ G
Sbjct: 655 ------YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRV 708
Query: 769 VSLGDAIVILSCE----SFSSRSRACSPPTKQKSDGCEE 803
V+ + ++I++ + +RA +P + ++ EE
Sbjct: 709 VNFKNTVIIMTSNIASATIQELARAGAPQGEIRAAVMEE 747
>gi|300088401|ref|YP_003758923.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528134|gb|ADJ26602.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 857
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A + A LA HAQ+ H+ +++A G++ + + P A+
Sbjct: 6 FTEKAQQAIFAAQRLAEDSRHAQIESEHLLLSLVAQEGGVVPQLLGKMGNQP---SAIAD 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L +LP + + P + L AA K + +
Sbjct: 63 KLQGELEKLPKAYGVTQV---FMSPNMKQILEAAEKETANFKDEYT-------------S 106
Query: 132 LEQLIISILD--DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E + I+ILD + + R++REAG + ++ + Q + + P ++ E
Sbjct: 107 TEHIFIAILDKDNRAGGRILREAGITKDRLYQALTQIRGSQRVTDPNPEGKYQALEKYGH 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A R LDP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 167 DLTEAAR-------RGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I KGDVPE L++ + + L + S R E E+R++ + ++ G I+
Sbjct: 220 AQRIVKGDVPEGLKNKRLVSLDMGSLVAGAKYRGEFEERLKAVLKEIQEAQGEYILF 276
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E + L + N L ++ Q + + +AN++ + R+G R G F
Sbjct: 550 VSRLMEGEIQKLLQMENRLRLRLVGQDEAIKAVANSIRRARAGLQDPNRPVGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V + +S + S
Sbjct: 604 ------IFLGPTGVGKTELAKALAEFMFDDEKAMVRLDMSEYMEKHTVS-----RLVGAP 652
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P+ V L++++E+A + ++ GR+ G V
Sbjct: 653 PGYVGYEEGGHLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQILDDGRLTDGQGRTVDFK 712
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 713 NTVIIMTS 720
>gi|281205439|gb|EFA79630.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 880
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 160/382 (41%), Gaps = 43/382 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + S++ + LAR + + Q+TP H+ +L+ L T ++ +E
Sbjct: 8 FTEKTNSILLASQELAREKCNTQLTPAHLLQALLSDEDHLATTIFEKAGG---DINKIEN 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L LP P Q + +++++ + A +Q+ N LAV
Sbjct: 65 GTKRLLQTLPVQRPPP------QDISPNSSMINVLRTAAKNQK-----NNGDSHLAV--- 110
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ LI+ +L+DPSV V+ + G QV++ V++ + + +T ES L
Sbjct: 111 -DHLILGLLEDPSVLSVLGDGGARKDQVQAAVKEVRGNKKITSATA-------ESTYEAL 162
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
S+ LDP+ R++++ VI L + K N V++GE VV G+
Sbjct: 163 SKYGHDLVADAATGKLDPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GD+P+ L + K + L + + R E E+R++ + V+ G GI+L + ++
Sbjct: 223 RIVHGDIPDNL-NCKVIALDMGALIAGAKYRGEFEERLKAVLKDVKESNG-GIILFIDEI 280
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
A ++ M+ L+ + +G T Y + P+
Sbjct: 281 HLV-LGAGKTDGA-----------MDAANLLKPMLARGELRCIGATTLDEYRKYVEKDPA 328
Query: 368 LETLWSLHPLTIPAGSLSLSLI 389
E + ++ P+ S ++S++
Sbjct: 329 FERRFQQVMVSEPSVSDTISIL 350
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEV 654
V K + + SL L ++V Q + V +A+ VL+ R+G R G F
Sbjct: 550 VTKLSQTEKQRTLSLGKHLHERVVGQDEAVDAVADAVLRSRAGLARLNQPLGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + + I +S + A +
Sbjct: 604 ------LFLGPTGVGKTELAKALAVELFDDEKHMIRIDMSEYMEQHAVA-----RLIGAP 652
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y + + EAV P+ V L ++VE+A + ++ GR+ G +
Sbjct: 653 PGYVGYDQGGQLTEAVRRKPYSVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGQGRTIDFS 712
Query: 773 DAIVILS 779
+ ++IL+
Sbjct: 713 NVVIILT 719
>gi|167762587|ref|ZP_02434714.1| hypothetical protein BACSTE_00943 [Bacteroides stercoris ATCC
43183]
gi|167699693|gb|EDS16272.1| ATP-dependent chaperone protein ClpB [Bacteroides stercoris ATCC
43183]
Length = 864
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ L + RG + P+H+ +++ + + + + L
Sbjct: 6 FTIKAQEAVQEAVNLTQARGQQAIEPVHLLQSVMKVGENVTNFIF---QKLGMNGQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S F++A + + E +
Sbjct: 63 VLDKQIDSLPKVS-----GGE---PYLSRETNEIFQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S S ++++AG + +++ + + E + + + +S E +
Sbjct: 106 LEPMLLALLTVKSTASTILKDAGMTEKDLRNAINELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKAVVNEVKKSEGDIILF 274
>gi|408380655|ref|ZP_11178237.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium
albertimagni AOL15]
gi|407745431|gb|EKF56965.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium
albertimagni AOL15]
Length = 867
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ P KA+ + + AL +
Sbjct: 14 LQSAQTYALSEGHQQFTPEHVLKVLLDDEQGMASSLISRAGGDP---KAVRIANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP + GG+ Q ++ L F A+ A ++ G S ++ LLA+ IE
Sbjct: 71 LPKVS-----GGNGQV-YLAQPLAKVFSTAEDAAKKAGDSFVTVERLLLALAIE------ 118
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
S S +++ G ++ + + EI T +N E+ L + A
Sbjct: 119 ---SSASTSASLKKGGVTAGALNQVIN-----EIRKGRTADGANA--EAGFDALKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTEEAREGRLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L++ K + L + + R E E+R++ + N V++ G I+
Sbjct: 229 VPESLKEKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|330446996|ref|ZP_08310647.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491187|dbj|GAA05144.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 858
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR--TACLQSHSHPLQCKAL 69
T++ S + A +LA R H + P H+ +L +R L L+ +
Sbjct: 6 FTSKFQSAISDAQSLALGRDHQYIEPAHLMVALLNQDGSTVRPLLTLLNIDITQLRSRLA 65
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
EL L+R+P T +GG Q L+ + A +R+
Sbjct: 66 EL-----LDRMPKVTG---IGGEVQLSHGMGVLLNMCDKL-AQKRKDKF----------- 105
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E I++ +D + + +E G ++ ++ ++Q + + ++ E
Sbjct: 106 ISSELFILAAAEDKGPLGELFKELGLTAKNIEQAIDQIRGGQKVDDPNAEENRQALEKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 166 IDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE LRD + L L + S R E E+R++ + N + GR I+
Sbjct: 219 LAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGRVILF 276
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E + L + + L +V Q + V +AN + + R+G R G F
Sbjct: 548 VSKMLEGERDKLLRMEDELHHRVIGQDEAVEAVANAIRRSRAGLADPQRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSLANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSCESFSSR 786
++I++ S R
Sbjct: 713 VIIMTSNLGSDR 724
>gi|348174862|ref|ZP_08881756.1| Clp protease ATP binding subunit [Saccharopolyspora spinosa NRRL
18395]
Length = 843
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 88 MLGGHCQFPTISNALVAAFKRA--QAHQRRGSIENQQQPLLAVKIELEQLIISILDDP-- 143
ML G P+ S L A KRA AH R Q I E ++ ++LDDP
Sbjct: 100 MLPGASAEPSASPGLTPAAKRALIGAHAR-------SQAAGKSYIGPEHILAALLDDPDS 152
Query: 144 SVSRVMREAGFSSTQVKSNVEQAVSLE----ICSQSTPVSSNKSKESNVLVLSQTASATK 199
+ +++ +S +++ V+QA + E TP S++ L+ A + K
Sbjct: 153 AAVKLLESQEVNSGKLRDRVDQAAATENIPTTAGSDTPTLDEYSRD-----LTGEARSGK 207
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LD + R +++ +E L + K N V++GE +V G+ +I GDVP
Sbjct: 208 -------LDLVVGRADEIEQTVEILSRRSKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVP 260
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E L+D + L L ++ R E EQR++++ + VR+ G I+
Sbjct: 261 ETLQDKRVLALDLTGLVAGSQYRGEFEQRLKKVIDEVRAAKGSVILF 307
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 16/191 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E L L AL ++V Q + V +A V + R+G H +
Sbjct: 514 VAQLTEDEKHRLLRLEEALHERVVGQDEAVLAVAEAVRRNRAGMA--------HPDRPIG 565
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
++LF G K ++ K LA L+FG + + +S F S
Sbjct: 566 SFLFL-GPTGVGKTELGKALAELMFGDEHKLIRFDMSEFQEKHTVS-----RLVGAPPGY 619
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + E V P+ V L +++E+A + ++ GR+ + G V + +
Sbjct: 620 VGYEEAGQLTEKVRRQPYSVLLFDEIEKAHRDVFNTLLQVLDDGRLTDAQGRTVDFRNTV 679
Query: 776 VILSCESFSSR 786
VI++ + R
Sbjct: 680 VIMTSNIGAQR 690
>gi|404252290|ref|ZP_10956258.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sphingomonas
sp. PAMC 26621]
Length = 859
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 29/292 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H ++ P H+ +L G+ + P + +
Sbjct: 6 FTDRAKGFLQSAQTVAIRMSHQRIAPEHILKALLEDEQGMASGLITAAGGDPKRATS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
++ L ++PA + + G Q P + N V +A+ A + S ++ L+A+
Sbjct: 63 ETDLLLAKIPAVSGS----GAQQTPGLDNDAVRVLDQAEQIATKSGDSFVTVERLLVALA 118
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ L + + + ++ AG + + + +EQ + + + + +
Sbjct: 119 LSL---------NTAAGKALKTAGVAPEALNAAIEQVRNGRVADSAGAEDKFDALKKFAR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 170 DLTQAARDGK-------LDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVP+ L+D K + L + S R E E+R++ + + V++ G
Sbjct: 223 ALRIANGDVPDTLKDRKLMSLDMGSLIAGAKYRGEFEERLKGVLDEVKAADG 274
>gi|415716971|ref|ZP_11466658.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1500E]
gi|388061471|gb|EIK84127.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1500E]
Length = 864
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 42/307 (13%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
+ AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 S---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISIL-DDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK- 184
+ E ++I ++ +P SV+ + + K NV S ++ + P +K
Sbjct: 106 --VSTEHMLIGMVASEPNSVADIFK---------KHNV----SADVLRKVVPTVRGGAKV 150
Query: 185 -----ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECL 237
E N L + + LDP+ R++++ VI+ L + K N V++GE
Sbjct: 151 TSPDAEGNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPG 210
Query: 238 ASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSC 295
VV G+ +I GDVP L++ + + L ++S + R E E+R++ + ++
Sbjct: 211 VGKTAVVEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQS 270
Query: 296 LGRGIVL 302
G+ I
Sbjct: 271 DGQIITF 277
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|149186279|ref|ZP_01864593.1| ATP-dependent Clp protease [Erythrobacter sp. SD-21]
gi|148830310|gb|EDL48747.1| ATP-dependent Clp protease [Erythrobacter sp. SD-21]
Length = 858
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 128/297 (43%), Gaps = 30/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H ++TP H+ +L G+ ++ +P E+
Sbjct: 6 FTDRAKGFLQAAQTVAIRMSHQRITPAHLLKALLDDEQGMAAQLIQRAGGNP-GVAITEI 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ AL ++P+ + GG Q P + N V A +A+ A + S Q+ L A+
Sbjct: 65 --DTALGKVPSVSG----GGAQQTPGLDNDAVRALDQAEQLAEKAGDSFVPVQRILQALA 118
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
++ D ++ AG + +++ +++A + + + +
Sbjct: 119 MQ----------DNDAGHALKAAGIDAKSLEAAIQEATGGRTADSAGAEDAYDAMKKYAR 168
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E++ ++ L + K N ++GE + G+
Sbjct: 169 DLTQAARDGK-------LDPVIGRDEEIRRTVQILARRTKNNPALIGEPGTGKTAIAEGL 221
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP++L+ + L + + R E E+R++ + + V+ G+ I+
Sbjct: 222 ALRIANGDVPDSLKGRTLMSLDLGALIAGAKYRGEFEERLKAVLDEVKGAEGQIILF 278
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 70/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + N L K+V Q + ++ V + R+G R G F
Sbjct: 548 VDKMMEGEREKLLDMENILAKRVIGQSQAIDAVSKAVRRARAGLQDPGRPLGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S F A +
Sbjct: 602 ------LFLGPTGVGKTELTKALAGFLFDDDQAMVRIDMSEFMEKHAVA-----RLIGAP 650
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 651 PGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVDFS 710
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 711 NTLIILTS 718
>gi|395490671|ref|ZP_10422250.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sphingomonas
sp. PAMC 26617]
Length = 859
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 29/292 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H ++ P H+ +L G+ + P + +
Sbjct: 6 FTDRAKGFLQSAQTVAIRMSHQRIAPEHILKALLEDEQGMASGLITAAGGDPKRATS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
++ L ++PA + + G Q P + N V +A+ A + S ++ L+A+
Sbjct: 63 ETDLLLAKIPAVSGS----GAQQTPGLDNDAVRVLDQAEQIATKSGDSFVTVERLLVALA 118
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ L + + + ++ AG + + + +EQ + + + + +
Sbjct: 119 LSL---------NTAAGKALKTAGVAPEALNTAIEQVRNGRVADSAGAEDKFDALKKFAR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 170 DLTQAARDGK-------LDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVP+ L+D K + L + S R E E+R++ + + V++ G
Sbjct: 223 ALRIANGDVPDTLKDRKLMSLDMGSLIAGAKYRGEFEERLKGVLDEVKAAEG 274
>gi|325179668|emb|CCA14066.1| heat shock protein 101 putative [Albugo laibachii Nc14]
Length = 888
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 48/306 (15%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP---LQC 66
Q T + ++ A +LA GHAQ+TP+H+ + + GL + + ++ LQ
Sbjct: 4 QDFTDKTQEYLQAAKSLAEDAGHAQLTPIHLVQALFDDADGLAKRLADRVDANKTGILQE 63
Query: 67 KALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
A +L +P+ T P ++ + + K A +RR +++ L
Sbjct: 64 TARQLKL------IPSQTPAP------DQVSVDSGMTKVLKYAD--KRRKEMKDTH---L 106
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
AV + LI+++ + V + GF +VK +E+ PV+S +++
Sbjct: 107 AV----DHLILALFTHTQCATVFKSNGFDERKVKEAIEK------VRGGRPVTSTSAED- 155
Query: 187 NVLVLSQTASATKVSKPRVSL------DPI--RNEDVMYVIENLMSKRKRNFVVVGECLA 238
+ TK + VSL DP+ R+E++ VI L + K N V++GE
Sbjct: 156 ------MYDALTKYGQNLVSLAESGKIDPVIGRDEEIRRVIRILCRRTKNNPVLIGEPGV 209
Query: 239 SIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCL 296
VV G+ +I GDVPE+L + + L + + R E E+R++ + V+
Sbjct: 210 GKTAVVEGLAQRIVFGDVPESL-NCQLFSLDMGALIAGAKYRGEFEERLKAVLKEVKDSD 268
Query: 297 GRGIVL 302
GR I+
Sbjct: 269 GRIILF 274
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 26/182 (14%)
Query: 605 NSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRK---GKFKDHSEVKEETWLF 661
S+ L L + +V Q++ V + V++ R+G RR+ G F
Sbjct: 557 TSDRLLHLEERIHNRVVGQEEAVNAVCEAVVRSRAGLSRREQPTGSF------------L 604
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LA +F + + V I +S + S R Q
Sbjct: 605 FLGPTGVGKTELAKALAFELFDNDKHMVRIDMSEYMEEHSVARLIGAPPGYVGHEEGGQ- 663
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
E++ P+ V L++++E+A + ++ GR+ S G V + +VI
Sbjct: 664 ------LTESIRRKPYNVVLLDEIEKAHPKVLNILLQLLDDGRLTDSHGRTVDFTNVVVI 717
Query: 778 LS 779
++
Sbjct: 718 MT 719
>gi|332142053|ref|YP_004427791.1| ClpB protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327552075|gb|AEA98793.1| ClpB protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 789
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + A +LA R H + P+H+ ML G +R Q++ + AL
Sbjct: 26 FTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQAN---INVNALRS 82
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP +GG Q S L+ + A QR+ I
Sbjct: 83 ALSQAIERLPRIEG---IGGDVQLSKDSGILLNLCDKI-AQQRKDEY-----------IT 127
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ L+D + +++ + ++S ++ + + ++ E
Sbjct: 128 SEIFVLAALEDKGRLGEILKSLNITKDAIESAIDDMRGGQKVTDPNAEDVRQALEKYTTD 187
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ ++ L + K N V++GE +V G+
Sbjct: 188 LTERAEQGK-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 240
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 241 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILF 296
>gi|295671390|ref|XP_002796242.1| heat shock protein HSP98 [Paracoccidioides sp. 'lutzii' Pb01]
gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidioides brasiliensis]
gi|226284375|gb|EEH39941.1| heat shock protein HSP98 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 926
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 55/289 (19%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L A+S L
Sbjct: 6 LTDRANQALVDAHALAEQHAHPQLLPIHLAVSLLDPPVDESKDQQVTTHPSHQASSGSLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRL-----PASTSTPMLGGHCQFPTISNALVAAFK 107
+ ++H P Q L N +L RL P T +P P + L AA
Sbjct: 66 KRVVEKAHGDPQQ---LRRALNKSLVRLASQDPPPETISPS-------PAFAKVLRAASN 115
Query: 108 RAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQA 166
++ Q+ +A+ + LI ++ DP++ R + +A + + + S ++Q
Sbjct: 116 LSK---------TQKDTYVAI----DHLIAALAQDPTIQRALADANIPNVKMIDSAIQQI 162
Query: 167 VSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMS 224
++ T + +S+ + TA A + +DP+ R E++ VI L
Sbjct: 163 RGMKRVDSKTADTEEESENLKKFTVDMTAMAREGK-----IDPVIGREEEIRRVIRILSR 217
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
+ K N V++GE VV G+ +I DVP L + K L L + S
Sbjct: 218 RTKNNPVLIGEPGVGKTTVVEGLARRIVNADVPANLANCKLLSLDVGSL 266
>gi|225681830|gb|EEH20114.1| heat shock protein [Paracoccidioides brasiliensis Pb03]
Length = 926
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 55/289 (19%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L A+S L
Sbjct: 6 LTDRANQALVDAHALAEQHAHPQLLPIHLAVSLLDPPVDESKDQQVTTHPSHQASSGSLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRL-----PASTSTPMLGGHCQFPTISNALVAAFK 107
+ ++H P Q L N +L RL P T +P P + L AA
Sbjct: 66 KRVVEKAHGDPQQ---LRRALNKSLVRLASQDPPPETISPS-------PAFAKVLRAASN 115
Query: 108 RAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQA 166
++ Q+ +A+ + LI ++ DP++ R + +A + + + S ++Q
Sbjct: 116 LSK---------TQKDTYVAI----DHLIAALAQDPTIQRALADANIPNVKMIDSAIQQI 162
Query: 167 VSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMS 224
++ T + +S+ + TA A + +DP+ R E++ VI L
Sbjct: 163 RGMKRVDSKTADTEEESENLKKFTVDMTAMAREGK-----IDPVIGREEEIRRVIRILSR 217
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
+ K N V++GE VV G+ +I DVP L + K L L + S
Sbjct: 218 RTKNNPVLIGEPGVGKTTVVEGLARRIVNADVPANLANCKLLSLDVGSL 266
>gi|406573719|ref|ZP_11049464.1| ATPase with chaperone activity [Janibacter hoylei PVAS-1]
gi|404556856|gb|EKA62313.1| ATPase with chaperone activity [Janibacter hoylei PVAS-1]
Length = 857
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 147/363 (40%), Gaps = 58/363 (15%)
Query: 20 VKQAMTLARR----RGHAQVTPLHVANTMLAAST----GLLRTACLQSHSHPLQCKALEL 71
V +A+ LA+R +GH +VTP H+ + ++ T LL+ A + Q A
Sbjct: 9 VAEALALAQRSAQTQGHPEVTPEHLVSALVQLDTPQCDTLLQAAGTGAGHVLAQADA--- 65
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQR-RGSIENQQQPLLAVKI 130
A S P G PT+ +L+A ++A R +G LL
Sbjct: 66 ----------AVRSLPTTSGAAASPTLGRSLLAVLQQADTLMRAKGDTHLALDLLLLALA 115
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L SR R+ +++ +++ + + TP +S E
Sbjct: 116 ETGHLA------AVESRGARD-------MEAKIDELRAGRKVTSETPAEGGESLEQYGTD 162
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 163 LTQAARDGK-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 215
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD + + L + + R E E+R++ + +++ G+ IV + +
Sbjct: 216 QRIVDGDVPESLRDKRLVSLDLGAMVAGAKYRGEFEERLKAVLEEIKASDGQ-IVTFIDE 274
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
L +S E M+ G ++ + L+G T + P
Sbjct: 275 LHTVVGAGASGEGA-----------MDAGNMLKPMLARGELRLVGATTLDEFREHIEKDP 323
Query: 367 SLE 369
+LE
Sbjct: 324 ALE 326
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 22/181 (12%)
Query: 605 NSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLF 661
+E L S+ + + ++ Q D V +++ V + R+G R G F
Sbjct: 556 ETEKLLSMESIIGSRLVGQADAVRAVSDAVRRSRAGIADPNRPTGSF------------L 603
Query: 662 FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYI 721
F G K ++AK LA +F V I +S ++ A + Y
Sbjct: 604 FLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYAERHAVA-----RLIGAPPGYVGYE 658
Query: 722 E--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
E + EAV P+ V L+++VE+A + + ++ GR+ G V + I++++
Sbjct: 659 EGGQLTEAVRRRPYSVVLLDEVEKAHPETFDILLQVLDDGRLTDGQGRTVDFRNVILVMT 718
Query: 780 C 780
Sbjct: 719 S 719
>gi|386347206|ref|YP_006045455.1| ATP-dependent chaperone ClpB [Spirochaeta thermophila DSM 6578]
gi|339412173|gb|AEJ61738.1| ATP-dependent chaperone ClpB [Spirochaeta thermophila DSM 6578]
Length = 870
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 132/301 (43%), Gaps = 28/301 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A L + H + P H+A ++ G+++ + + Q +E
Sbjct: 6 FTVKAQEALQNATKLMHQYDHTLLEPEHIALAIVQQEEGIIKPLVERLGASRAQ---IEH 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L + P + GG ++SN +A+ +R E +
Sbjct: 63 ELVALLEKKPKVYAE---GGSTTGVSLSNQAARVLSKAEMEAKRMQDEY---------VS 110
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++S+ +P V RV + G + +K +E + P S+ ++ E
Sbjct: 111 VEHILLSLAQEPGEVGRVFQRNGLTYEGIKHAIEGIRQGRRVTSQDPESTYQALEKYCRD 170
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A K LDP+ R+E++ +I+ L+ + K N V++G +V G+
Sbjct: 171 LTALARQEK-------LDPVIGRDEEIRRMIQVLLRRTKNNPVLMGPPGVGKTAIVEGLA 223
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVP++L+D + L L + + R E E+R++ + N V + G+ I+L + +
Sbjct: 224 RRIVAGDVPDSLKDKRILALDLGALVAGAKYRGEFEERLKAVINEVIASEGK-IILFIDE 282
Query: 307 L 307
L
Sbjct: 283 L 283
>gi|386725033|ref|YP_006191359.1| protein ClpE [Paenibacillus mucilaginosus K02]
gi|384092158|gb|AFH63594.1| ClpE [Paenibacillus mucilaginosus K02]
Length = 713
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K ++ + L L LE KV Q + V +A V + R+G + K
Sbjct: 401 VGKLQQDEAAKLKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPKN---------KPI 451
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE-DSRNKRSRDEQ 716
F G K +++K LA +FGS + + + +S + + S S E+
Sbjct: 452 ASFLFVGPTGVGKTELSKSLAEELFGSADAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEE 511
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
+ ER V NP+ + L++++E+A Q F + +E GR+ S G VS D ++
Sbjct: 512 AGQLTER----VRRNPYSIILLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTVSFKDTVI 567
Query: 777 ILS 779
I++
Sbjct: 568 IMT 570
>gi|387813183|ref|YP_005428664.1| ATP-dependent protease [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338194|emb|CCG94241.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 859
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP---LQCKA 68
LT++ + + A ++A + H + P+H+ +L G ++ Q P Q A
Sbjct: 6 LTSKLQTALADAQSIAVGKDHNFIEPVHLMQALLDQQGGSMKPLLKQVGVEPGRVRQAVA 65
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLA 127
E+ + P + G+ ++SN + F + + Q+RG + +L
Sbjct: 66 KEI------------ENLPEVQGNAGDVSMSNDMGRLFNISDKLAQKRGDQFISSELVLL 113
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+E D S+ R++RE G ++ +++ E + + + ++
Sbjct: 114 AAVE---------DRGSLGRILREQGVDKAALEKAIDEVRGGESVNDAGAEENRQALSKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A K LDP+ R++++ I+ L +RK N V++GE +V
Sbjct: 165 TIDLTERAEAGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VP+ L+D K L L + + R E E+R++ + N
Sbjct: 218 GLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL +V Q + V ++N V + R+G R G F
Sbjct: 548 VSKMLEGERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+V+++
Sbjct: 713 VVVMTS 718
>gi|89075037|ref|ZP_01161478.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
SKA34]
gi|89049124|gb|EAR54689.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
SKA34]
Length = 858
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR--TACLQSHSHPLQCKAL 69
T++ S + A +LA R H + P H+ +L +R L L+ +
Sbjct: 6 FTSKFQSAISDAQSLALGRDHQYIEPAHLMVALLNQDGSTVRPLLTLLNIDITQLRSRLA 65
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
EL L+R+P T +GG Q L+ + A +R+
Sbjct: 66 EL-----LDRMPKVTG---IGGEVQLSHGMGVLLNMCDKL-AQKRKDKF----------- 105
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E I++ +D + + +E G ++ ++ ++Q + + ++ E
Sbjct: 106 ISSELFILAAAEDKGPLGELFKELGLTAKNIEQAIDQVRGGQKVDDPNAEENRQALEKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 166 VDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE LRD + L L + S R E E+R++ + N + GR I+
Sbjct: 219 LAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGRVILF 276
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E + L + + L +V Q + V +AN + + R+G R G F
Sbjct: 548 VSKMLEGERDKLLRMEDELHHRVIGQDEAVVAVANAIRRSRAGLADPQRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSLANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSCESFSSR 786
++I++ S R
Sbjct: 713 VIIMTSNLGSDR 724
>gi|291295274|ref|YP_003506672.1| ATP-dependent chaperone ClpB [Meiothermus ruber DSM 1279]
gi|290470233|gb|ADD27652.1| ATP-dependent chaperone ClpB [Meiothermus ruber DSM 1279]
Length = 854
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A + Q+ LAR H+Q+ H+A ML + GL ++ +P + +
Sbjct: 7 TEQARQAIAQSQVLARESAHSQIDLPHLAAVMLRDAAGLPAKIVQKAGQNP---QNIYQA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
L RLP + T GG +S+ L +A RA+ LA
Sbjct: 64 AQSELGRLPKVSGTE--GGQY----LSSRLASALGRAEK--------------LA----- 98
Query: 133 EQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV-- 190
++L + ++ + E G+ Q S V QA+ EI T S + N L
Sbjct: 99 DELKDRFVALDTLLLALAETGYGGLQA-SAVRQALQ-EIRGGRTVNSEHAEGTYNALEQY 156
Query: 191 ---LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ A K LDP+ R+E++ VI+ L+ + K N V++GE VV
Sbjct: 157 GLDLTRQAEEGK-------LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAVVE 209
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I KGDVPE L+ + + L + S
Sbjct: 210 GLAQRIVKGDVPEGLKGKRIVSLQMGSL 237
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L L + L K+V Q + + +A+ + + R+G KD + +
Sbjct: 538 VAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAG-------LKDPN--RPI 588
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS--TRADSTEDSRNKRSRDE 715
F G K ++AK LA +F + N V I +S + T A +E
Sbjct: 589 GSFLFLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEE 648
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV P+ V L +++E+A + ++ GR+ G V + +
Sbjct: 649 GG-----QLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTV 703
Query: 776 VILSC 780
+IL+
Sbjct: 704 IILTS 708
>gi|28872533|ref|NP_795152.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28855788|gb|AAO58847.1| clpB protein, putative [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 882
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+++ +
Sbjct: 94 QDALLVANLELGQTQVEQAALILALLRNP-----MRYAGSRYQPLLAKLNIDRLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
Q P + + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 KQEQPANGKSAAQGESLLERFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+AL+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQALKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|410091572|ref|ZP_11288129.1| clpB protein [Pseudomonas viridiflava UASWS0038]
gi|409761113|gb|EKN46212.1| clpB protein [Pseudomonas viridiflava UASWS0038]
Length = 882
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+++ +
Sbjct: 94 QDALLVANLELGQTQVEQAALILALLRNP-----MRYAGSRYQPLLAKLNIDRLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
Q P + + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QQEQPANGKPAAQGESLLERFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+AL+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQALKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|424069851|ref|ZP_17807295.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407993816|gb|EKG34444.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 882
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+++ +
Sbjct: 94 QDALLVANLELGQTQVEQAALILALLRNP-----MRYAGSRYQPLLAKLNIDRLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
Q P + + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QQEQPANGKSAAQGESLLERFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+AL+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQALKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|226288964|gb|EEH44476.1| heat shock protein HSP98 [Paracoccidioides brasiliensis Pb18]
Length = 771
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 55/289 (19%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML-------------------AASTGLL 52
LT A + A LA + H Q+ P+H+A ++L A+S L
Sbjct: 6 LTDRANQALVDAHALAEQHAHPQLLPIHLAVSLLDPPVDESKDQQVTTHPSHQASSGSLF 65
Query: 53 RTACLQSHSHPLQCKALELCFNVALNRL-----PASTSTPMLGGHCQFPTISNALVAAFK 107
+ ++H P Q L N +L RL P T +P P + L AA
Sbjct: 66 KRVVEKAHGDPQQ---LRRALNKSLVRLASQDPPPETISPS-------PAFAKVLRAASN 115
Query: 108 RAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQA 166
++ Q+ +A+ + LI ++ DP++ R + +A + + + S ++Q
Sbjct: 116 LSK---------TQKDTYVAI----DHLIAALAQDPTIQRALADANIPNVKMIDSAIQQI 162
Query: 167 VSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMS 224
++ T + +S+ + TA A + +DP+ R E++ VI L
Sbjct: 163 RGMKRVDSKTADTEEESENLKKFTVDMTAMAREGK-----IDPVIGREEEIRRVIRILSR 217
Query: 225 KRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
+ K N V++GE VV G+ +I DVP L + K L L + S
Sbjct: 218 RTKNNPVLIGEPGVGKTTVVEGLARRIVNADVPANLANCKLLSLDVGSL 266
>gi|336415800|ref|ZP_08596138.1| chaperone ClpB [Bacteroides ovatus 3_8_47FAA]
gi|335939703|gb|EGN01575.1| chaperone ClpB [Bacteroides ovatus 3_8_47FAA]
Length = 862
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHIILALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|408501733|ref|YP_006865652.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
gi|408466557|gb|AFU72086.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
Length = 927
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 151/367 (41%), Gaps = 42/367 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
+ + T A + A+ A G+ QV LH+ +++L +G++ +Q+ Q
Sbjct: 1 MNENFTTMAQQAIGDAIQSASAAGNPQVDVLHLLDSLLRQQSGVV-PGLIQAAGGDSQRV 59
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E+ AL LP+++ G P S L A +A E + Q +
Sbjct: 60 GAEV--RQALVALPSAS-----GSTASQPDASRQLSMALAQA---------EKEMQAMGD 103
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+I+I PS + ++ G + ++ V Q + + K+ E
Sbjct: 104 EYVSTEHLLIAIAQGPSQAADILNRNGLQADTLRKAVPQVRGGAKVTSPDAEGTYKALEK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L+ A K LDP+ R++++ V++ L + K N V++GE VV
Sbjct: 164 YSTDLTAQAKEGK-------LDPVIGRDQEIRRVMQILSRRTKNNPVLIGEPGVGKTAVV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ ++I GDVP L+ + + L +SS + R E E+R++ + N ++S G+ ++
Sbjct: 217 EGLAERIVAGDVPTTLQGKRLISLDLSSMVAGSKYRGEFEERLKAVLNEIKSANGQ--II 274
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
D A ++E M+ G ++ + L+G T Y
Sbjct: 275 TFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYRENI 323
Query: 363 SGHPSLE 369
P+LE
Sbjct: 324 EKDPALE 330
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E +E L + + L K+V Q++ ++ +++ V + R+G R G F
Sbjct: 568 VGRLMEGENEKLLHMEDYLGKRVVGQQEAIHAVSDAVRRSRAGIADPDRPTGSF------ 621
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F V I +S + S +R
Sbjct: 622 ------MFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPG--- 672
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L ++VE+A+ + ++ GR+ G
Sbjct: 673 ------YVGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDLLLQVLDDGRLTDGQGRT 726
Query: 769 VSLGDAIVILSC 780
V + I+I++
Sbjct: 727 VDFKNTILIMTS 738
>gi|293370802|ref|ZP_06617348.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CMC 3f]
gi|292634162|gb|EFF52705.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CMC 3f]
Length = 862
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHIILALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|94988865|ref|YP_596966.1| ATP-dependent endopeptidase Clp ATP-binding subunit [Streptococcus
pyogenes MGAS9429]
gi|94992755|ref|YP_600854.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus pyogenes MGAS2096]
gi|417856576|ref|ZP_12501635.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus pyogenes HKU QMH11M0907901]
gi|94542373|gb|ABF32422.1| ATP-dependent endopeptidase clp ATP-binding subunit [Streptococcus
pyogenes MGAS9429]
gi|94546263|gb|ABF36310.1| ATP-dependent endopeptidase clp ATP-binding subunit clpE
[Streptococcus pyogenes MGAS2096]
gi|387933531|gb|EIK41644.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus pyogenes HKU QMH11M0907901]
Length = 760
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
+ + L + S R + E+R +EEI+N
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|160887374|ref|ZP_02068377.1| hypothetical protein BACOVA_05393 [Bacteroides ovatus ATCC 8483]
gi|237722645|ref|ZP_04553126.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 2_2_4]
gi|299148949|ref|ZP_07042011.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_23]
gi|383114770|ref|ZP_09935532.1| chaperone ClpB [Bacteroides sp. D2]
gi|423288294|ref|ZP_17267145.1| chaperone ClpB [Bacteroides ovatus CL02T12C04]
gi|423295450|ref|ZP_17273577.1| chaperone ClpB [Bacteroides ovatus CL03T12C18]
gi|156107785|gb|EDO09530.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus ATCC 8483]
gi|229448455|gb|EEO54246.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 2_2_4]
gi|298513710|gb|EFI37597.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_23]
gi|313693519|gb|EFS30354.1| chaperone ClpB [Bacteroides sp. D2]
gi|392671183|gb|EIY64659.1| chaperone ClpB [Bacteroides ovatus CL02T12C04]
gi|392673178|gb|EIY66642.1| chaperone ClpB [Bacteroides ovatus CL03T12C18]
Length = 862
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHIILALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|120553812|ref|YP_958163.1| ATPase [Marinobacter aquaeolei VT8]
gi|120323661|gb|ABM17976.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
Length = 859
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP---LQCKA 68
LT++ + + A ++A + H + P+H+ +L G ++ Q P Q A
Sbjct: 6 LTSKLQTALADAQSIAVGKDHNFIEPVHLMQALLDQQGGSIKPLLKQVGVEPGRVRQAVA 65
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLA 127
E+ + P + G+ ++SN + F + + Q+RG + +L
Sbjct: 66 KEI------------ENLPEVQGNAGDVSMSNDMGRLFNISDKLAQKRGDQFISSELVLL 113
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+E D S+ R++RE G ++ +++ E + + + ++
Sbjct: 114 AAVE---------DRGSLGRILREQGVDKAALEKAIDEVRGGESVNDAGAEENRQALSKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A K LDP+ R++++ I+ L +RK N V++GE +V
Sbjct: 165 TIDLTERAEAGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VP+ L+D K L L + + R E E+R++ + N
Sbjct: 218 GLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL +V Q + V ++N V + R+G R G F
Sbjct: 548 VSKMLEGERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+V+++
Sbjct: 713 VVVMTS 718
>gi|255692798|ref|ZP_05416473.1| ATP-dependent chaperone protein ClpB [Bacteroides finegoldii DSM
17565]
gi|260621516|gb|EEX44387.1| ATP-dependent chaperone protein ClpB [Bacteroides finegoldii DSM
17565]
Length = 862
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDRQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHIILALLTIKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|415725997|ref|ZP_11470498.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis
00703Dmash]
gi|388063870|gb|EIK86438.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis
00703Dmash]
Length = 864
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I ++ +V+ + ++ S+ ++ V + + K+ E
Sbjct: 106 --VSTEHMLIGMVASAPNAVADIFKKYNVSADALRKAVPTVRGGAKVTSPDAEGNYKALE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ ++ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KYSIDMTARAREGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|90580379|ref|ZP_01236186.1| putative clpB, ATPase with chaperone activity [Photobacterium
angustum S14]
gi|90438681|gb|EAS63865.1| putative clpB, ATPase with chaperone activity [Vibrio angustum S14]
Length = 858
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLR--TACLQSHSHPLQCKAL 69
T++ S + A +LA R H + P H+ +L +R L L+ +
Sbjct: 6 FTSKFQSAISDAQSLALGRDHQYIEPAHLMVALLNQDGSTVRPLLTLLNIDITQLRSRLA 65
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
EL L+R+P T +GG Q L+ + A +R+
Sbjct: 66 EL-----LDRMPKVTG---IGGEVQLSHGMGVLLNMCDKL-AQKRKDKF----------- 105
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E I++ +D + + +E G ++ ++ ++Q + + ++ E
Sbjct: 106 ISSELFILAAAEDKGPLGELFKELGLTAKNIEQAIDQIRGGQKVDDPNAEENRQALEKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 166 IDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE LRD + L L + S R E E+R++ + N + GR I+
Sbjct: 219 LAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERLKAVLNELSQEDGRVILF 276
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E + L + + L +V Q + V +AN + + R+G R G F
Sbjct: 548 VSKMLEGERDKLLRMEDELHHRVIGQDEAVVAVANAIRRSRAGLADPQRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSLANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSCESFSSR 786
++I++ S R
Sbjct: 713 VIIMTSNLGSDR 724
>gi|71730024|gb|EAO32116.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
Length = 861
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSH-PLQCKALE 70
LT+ + + A +LA R H + P+HV + +L G R+ +Q+ + PL + L
Sbjct: 6 LTSRFQNALADAQSLAVGRDHTIIEPVHVFSALLDQQGGSTRSLLVQAGVNVPLLRERLT 65
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKR----AQAHQRRGSIENQQQPLL 126
+ P + G + SN L F R AQ H + +
Sbjct: 66 EILE----------ALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQ---------FM 106
Query: 127 AVKIELEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
A E +++++DD + + +R AG ++++ +++ E ++ E
Sbjct: 107 AS----EWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRGGETVQTENAEEQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 163 KYTIDLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE LR + L L + + R E E+R++ + N + GR I+
Sbjct: 216 VEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVIL 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|404424640|ref|ZP_11006201.1| chaperone ClpB [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|403650808|gb|EJZ06006.1| chaperone ClpB [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
Length = 848
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 148/811 (18%), Positives = 284/811 (35%), Gaps = 140/811 (17%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + + + A+ A G+ ++ P H+ +L + G+ P +A
Sbjct: 7 TTKTQAALTSALQAASSAGNPEIRPAHLLMALLTQNEGIAAPLLEAVGVDPATIRA---G 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
L++LP+++ G P +S +AA AQ N + +
Sbjct: 64 AQRLLDQLPSAS------GASSQPQLSRESLAAITTAQ---------NLATEMDDEYVST 108
Query: 133 EQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L++ + D V++++ G S ++ + + P S ++ E L
Sbjct: 109 EHLMVGLATGDSEVAKLLTGHGASPEALREAFTKVRGSARVTSPDPEGSYQALEKYSTDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A K LDP+ R+ ++ V++ L + K N V++GE +V G+
Sbjct: 169 TARAREGK-------LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+LRD + L + S R E E+R++ + + ++ G+ ++ + +L
Sbjct: 222 RIVAGDVPESLRDKTVISLDLGSMVAGAKYRGEFEERLKAVLDEIKDSAGQ-VITFIDEL 280
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR------- 360
++ E M+ G ++ + L+G T Y +
Sbjct: 281 HTIVGAGATGESA-----------MDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAA 329
Query: 361 -------CKSGHPSLETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSK 402
G PS+E + H + I +L + +D + ++
Sbjct: 330 LERRFQQVLVGEPSVEDTVGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPD 389
Query: 403 KA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCN-SDSPTSSLPAWL 457
KA + S L E + ++ + E E +L+ + S L L
Sbjct: 390 KAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALEKEEDDASKERLEKLRGEL 449
Query: 458 QQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFS 517
YK + + + G D+ ++ +S+ + +ER + A+
Sbjct: 450 ADYKEKLSELTTRWQNEKGAIDVVRELKEQLDSLRGEADRAERDGDLAKAA--------- 500
Query: 518 YDQQYPNFHKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLS 577
+ +Y + + P RE+ L D IP + L+
Sbjct: 501 -ELRYGRIPEVEKKLDAALPVAEARENVMLKEEVGPDDIAEVVEAWTGIPAGRMLE---- 555
Query: 578 SNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKC 637
S+ ++ ME L K+V Q+ V +++ V +
Sbjct: 556 ---------GESAKLLRME-----------------EELGKRVIGQRAAVTAVSDAVRRT 589
Query: 638 RSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS 694
R+G R G F F G K ++AK LA +F V I +S
Sbjct: 590 RAGVADPNRPTGSF------------MFLGPTGVGKTELAKALAEFLFDDERAMVRIDMS 637
Query: 695 SFSSTRADSTEDSRNKRSRDEQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQ 749
+ + + YI + EAV P+ V L +++E+A
Sbjct: 638 EYGEKHSVARLVG--------APPGYIGYDQGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 689
Query: 750 KGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ ++ GR+ G V + I+IL+
Sbjct: 690 DVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720
>gi|357239826|ref|ZP_09127160.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
ictaluri 707-05]
gi|356751582|gb|EHI68734.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
ictaluri 707-05]
Length = 691
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V KE L +L + L+K+V Q + V IA T+ + R G R G F
Sbjct: 377 VGNLKEKEQSQLINLADDLKKQVIGQDEAVDKIAKTIRRNRVGLGSPNRPIGSF------ 430
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 431 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----ELVGAP 479
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 480 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 539
Query: 773 DAIVILSCESFSSRSRAC 790
D I+I++ + + +S A
Sbjct: 540 DTIIIMTSNAGTGKSEAS 557
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
+DP+ R+E+++ VIE L + K N V++GE VV G+ KI G VP L+
Sbjct: 77 DIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGK 136
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVR 293
+ + L + S R + E+R++++ +R
Sbjct: 137 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIR 168
>gi|297243145|ref|ZP_06927083.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
AMD]
gi|296889356|gb|EFH28090.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
AMD]
Length = 864
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 42/307 (13%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A E + +
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQA---------EKEMHAMGD 103
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK- 184
+ E ++I ++ +V+ + + K NV S ++ ++ P +K
Sbjct: 104 EYVSTEHMLIGMVASAPNAVADIFK---------KHNV----SADVLRKAVPTVRGGAKV 150
Query: 185 -----ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECL 237
E N L + + LDP+ R++++ VI+ L + K N V++GE
Sbjct: 151 TSPDAEGNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPG 210
Query: 238 ASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSC 295
VV G+ +I GDVP L++ + + L ++S + R E E+R++ + ++
Sbjct: 211 VGKTAVVEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQS 270
Query: 296 LGRGIVL 302
G+ I
Sbjct: 271 DGQIITF 277
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|423299025|ref|ZP_17277050.1| chaperone ClpB [Bacteroides finegoldii CL09T03C10]
gi|408474374|gb|EKJ92893.1| chaperone ClpB [Bacteroides finegoldii CL09T03C10]
Length = 862
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDRQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHIILALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L L L K+V Q + + +A+ V + R+G R G F
Sbjct: 546 VSKMMQSEKDKLLHLEEELHKRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSF------ 599
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F I +S + + S
Sbjct: 600 ------IFLGTTGVGKTELAKALAEFLFDDETMMTRIDMSEYQEKHSVS-----RLVGAP 648
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EA+ P+ V L +++E+A + ++ GR+ + G V+
Sbjct: 649 PGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFK 708
Query: 773 DAIVILSCESFSS 785
+ I+I++ SS
Sbjct: 709 NTIIIMTSNMGSS 721
>gi|442322518|ref|YP_007362539.1| ATP-dependent chaperone protein ClpB [Myxococcus stipitatus DSM
14675]
gi|441490160|gb|AGC46855.1| ATP-dependent chaperone protein ClpB [Myxococcus stipitatus DSM
14675]
Length = 874
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A +++ TLARR + Q P H+A +L G++ L+ ++ A L
Sbjct: 6 FTVKAQEAIQEGQTLARRADNPQYEPEHLAAALLGQKDGIV-DPLLRKLGADVKLFASRL 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL +LP M GG + L+ F +A +++ + L I
Sbjct: 65 --GEALGKLPR-----MQGGESAM--LGQRLLKTFDKA---------DDEAKALKDEFIS 106
Query: 132 LEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L++++ D ++ VM+ +G + +V S++++ + S+ ++ E
Sbjct: 107 SEHLLLALTQDKGALGEVMKASGVTRERVLSSLKEVRGSGRVTSQDAESTYQALEKYGRD 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 167 LTEAAREGK-------LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L++ + + L + + R E E+R++ + V G+ I+
Sbjct: 220 RRIVDGDVPESLKNKQLITLDLGAMVAGAKYRGEFEERLKAVLKEVADSAGQVILF 275
>gi|283782605|ref|YP_003373359.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 409-05]
gi|283441971|gb|ADB14437.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 409-05]
Length = 864
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQTGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A E + +
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQA---------EKEMHAMGD 103
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 104 EYVSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|269796805|ref|YP_003316260.1| ATP-dependent chaperone ClpB [Sanguibacter keddieii DSM 10542]
gi|269098990|gb|ACZ23426.1| ATP-dependent chaperone ClpB [Sanguibacter keddieii DSM 10542]
Length = 871
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 41/341 (12%)
Query: 34 QVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHC 93
QV P+H+ + +LA TG T L + + +A+ AL LP + G
Sbjct: 27 QVEPVHLLDALLAQQTGT--TPGLLAETGA-DAQAVGSAVRRALVALPT-----LSGSSV 78
Query: 94 QFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSR-VMREA 152
PT+S+A+ + +RA R+ + + Q + I E L++ + PS + ++ A
Sbjct: 79 AEPTLSSAMSSVLQRA----RKEAADLQDE-----YISTEHLLLGLASAPSAAADILVRA 129
Query: 153 GFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI-- 210
G + + + + + P + KS E + L++ A + LDP+
Sbjct: 130 GVTPEALAAAIPVVRGGRRVTSPNPEGTYKSLEQYGVDLTEAARDGR-------LDPVIG 182
Query: 211 RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSI 270
R+ ++ V++ L + K N V++GE VV G+ +I GDVP++L+ + + L +
Sbjct: 183 RDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPDSLKGKRLISLDL 242
Query: 271 SSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIE 328
++ R E E+R++ + ++ G +V + +L SE
Sbjct: 243 AAMVAGAKYRGEFEERLKAVLEEIKGSDGE-VVTFIDELHTVVGAGGGSEGA-------- 293
Query: 329 HIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
M+ G ++ + L+G T Y P+LE
Sbjct: 294 ---MDAGNMLKPMLARGELRLVGATTLDEYREHVEKDPALE 331
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 22/180 (12%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFF 662
SE L ++ + L ++ QK V +++ V + R+G R G F F
Sbjct: 563 SEKLLTMEDVLGSRLIGQKAAVATVSDAVRRARAGVSDPDRPTGSF------------MF 610
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G K ++AK LA +F V I +S +S + Y E
Sbjct: 611 LGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHTVA-----RLVGAPPGYVGYEE 665
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L+++VE+A + ++ GR+ G V + I++L+
Sbjct: 666 GGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILVLTS 725
>gi|255727689|ref|XP_002548770.1| heat shock protein 104 [Candida tropicalis MYA-3404]
gi|240133086|gb|EER32642.1| heat shock protein 104 [Candida tropicalis MYA-3404]
Length = 901
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 42/274 (15%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA-----ASTGLLRTACLQSHSHPLQCK 67
T A ++ A LA+ + ++Q+ PLH + ST L+T ++ +
Sbjct: 5 TDNAIKIINNATELAKEQSNSQLLPLHFLAAFIPTDDTEGSTQYLKTIVKKAR---YEWG 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
E N L RLP+ P + + +++ Q I+ QQ+
Sbjct: 62 DFERIVNRHLVRLPSQNPPP------------DEIRPSYQAGQVLMNANKIKQQQKDSYV 109
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNV-EQAVSLEICSQSTPVSS-----N 181
+ + +++++L+D S+ + +EAG + +K+ V E S I S+ SS N
Sbjct: 110 AQ---DHILLALLEDQSIKDIFKEAGMNVDNIKTQVIELRGSQRIDSRQADSSSSYEFLN 166
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
K E ++ A K+ DP+ R E++ VI L + K N V+VG+
Sbjct: 167 KYCED----FTEKAREGKI-------DPVIGREEEIRRVIRVLARRSKSNSVLVGDAGVG 215
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
+V GV +I GDVP L + L + +
Sbjct: 216 KTSIVEGVAQRIVDGDVPNVLAGARLFSLDLGAL 249
>gi|410495312|ref|YP_006905158.1| Chaperone protein clpB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410440472|emb|CCI63100.1| Chaperone protein clpB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 763
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
+DP+ R++++ VIE L + K N V++GE VV G+ KI G VP L+
Sbjct: 135 DIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVR 293
+ + L + S R + E+R++++ +R
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIR 226
>gi|19746461|ref|NP_607597.1| ATP-dependent protease [Streptococcus pyogenes MGAS8232]
gi|19748664|gb|AAL98096.1| putative ATP-dependent protease [Streptococcus pyogenes MGAS8232]
Length = 760
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q + V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS NN + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSTNNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP+ L+
Sbjct: 135 NIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIIDGTVPQKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
+ + L + S R + E+R +EEI+N
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|134103380|ref|YP_001109041.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|291004401|ref|ZP_06562374.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133916003|emb|CAM06116.1| clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 828
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 49/357 (13%)
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP ++S P P ++ + A RA A R + I E ++ ++
Sbjct: 101 LPGASSQP-----SASPGLTPSAKRALIRAHARSRAAGVSY---------IGPEHVLGAL 146
Query: 140 LDDPSVS--RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
LDDP + +++R ++ +++ V+ A S E + S + + L++ A +
Sbjct: 147 LDDPDAAAVKLLRSQEINTDKLRDRVDGAASAEGIPATAGPSDTPTLDDYGRDLTEQARS 206
Query: 198 TKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
R+ + R E++ IE L + K N V++GE +V G+ +I GDVP
Sbjct: 207 G-----RLDIVVGRGEEIEQTIEILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIASGDVP 261
Query: 258 EALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRAS 315
E L + + L ++ + R E E+R++++ + VR GR +VL + +L A
Sbjct: 262 ETLAGKRVVALDLTGLVAGSKYRGEFEERLKKVIDEVRDAEGR-VVLFIDELHTV-VGAG 319
Query: 316 SSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLH 375
SE M+ G ++ ++G T Y R +LE +
Sbjct: 320 GSEGG-----------MDAGNILKPALARGELHVIGATTVDEYRRYVETDGALERRF--Q 366
Query: 376 PLTIPAGSLSLSLITTDSDLQSQSTSKKAESGVSWLLFEGEEENKQLTCCADCSAKF 432
P+ IP S+ T L+ S +A GV + ++ LT A S ++
Sbjct: 367 PVMIPEPSVE----ETVQILEGLRDSYEAHHGVRFT-------DEALTAAAVLSDRY 412
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 38/202 (18%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L L AL ++V Q++ V +A V + +G R G F
Sbjct: 514 VAQLTESEKERLLKLEEALHERVVGQEEAVTAVAEAVRRSLAGMGDPDRPVGSF------ 567
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA L+FG + V +S F R+ SR
Sbjct: 568 ------LFLGPTGVGKTELAKALAGLLFGDEDRLVRFDMSEFQE---------RHTVSRL 612
Query: 714 ---------DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
E++ ER V P+ V L +++E+A + ++ GR+ +
Sbjct: 613 VGAPPGYVGHEEAGQLTER----VRRQPYSVLLFDEIEKAHQDVFNALLQVLDDGRLTDA 668
Query: 765 SGDEVSLGDAIVILSCESFSSR 786
G V + +VI++ + R
Sbjct: 669 QGRTVDFRNTVVIMTSNIGAKR 690
>gi|251782902|ref|YP_002997205.1| ATP-dependent endopeptidase clp ATP-binding subunit [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|386317420|ref|YP_006013584.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
gi|408402034|ref|YP_006859998.1| ATP-dependent endopeptidase clp ATP-binding subunit [Streptococcus
dysgalactiae subsp. equisimilis RE378]
gi|417927338|ref|ZP_12570726.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|242391532|dbj|BAH81991.1| ATP-dependent endopeptidase clp ATP-binding subunit [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|323127707|gb|ADX25004.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
gi|340765212|gb|EGR87738.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|407968263|dbj|BAM61501.1| ATP-dependent endopeptidase clp ATP-binding subunit [Streptococcus
dysgalactiae subsp. equisimilis RE378]
Length = 763
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
+DP+ R++++ VIE L + K N V++GE VV G+ KI G VP L+
Sbjct: 135 DIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVR 293
+ + L + S R + E+R++++ +R
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIR 226
>gi|156740924|ref|YP_001431053.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156232252|gb|ABU57035.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 871
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 37/270 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + A ++A R G++Q+ P H+ +L + G++ + + + AL
Sbjct: 8 LTQKSEEALLSAQSMAERNGNSQIEPEHLLLALLEQTDGVVPQVLTKLN---VAVGALVQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+N+ P + GG Q P + +V A + P
Sbjct: 65 QLRAEINKFPRVS-----GGGVQLQYSPRMRTVVVRA--------------ADEMPQFGD 105
Query: 129 K-IELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ I E L++SIL RV+R+AG + ++ + + + + TP + + E
Sbjct: 106 EYISTEHLLLSILQHAGGGAERVLRQAGITREKLLQALREVRGSQRVTSPTPEGTYAALE 165
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L++ A K LDP+ R+E++ VI+ L + K N V++GE +
Sbjct: 166 QYGRDLTELARRGK-------LDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAI 218
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
V G+ +I + DVPEAL++ + + L + +
Sbjct: 219 VEGLAQRIVREDVPEALKNKRIIALDMGAL 248
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 104/262 (39%), Gaps = 36/262 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L ++V Q + V +AN V + R+G R G F
Sbjct: 551 VSKLLEGEIEKLVHMEERLHQRVVGQDEAVSAVANAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F V I +S + +
Sbjct: 605 ------LFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVA-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ G V+
Sbjct: 654 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQILDDGRLTDGHGRVVNFK 713
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQ 832
+ ++I++ S SP ++ + ++GA+ + SV +L + +
Sbjct: 714 NTVIIMT-------SNIASPTIQELA-----QRGASQDIIRASVMEELRTQLRPEFL--N 759
Query: 833 SIDDIGLLESVDKRIIFKIMEL 854
ID+I + + + + I +I+E+
Sbjct: 760 RIDEIIVFKPLSREQIGQIVEI 781
>gi|417752518|ref|ZP_12400714.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|333771716|gb|EGL48632.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
Length = 763
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
+DP+ R++++ VIE L + K N V++GE VV G+ KI G VP L+
Sbjct: 135 DIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVR 293
+ + L + S R + E+R++++ +R
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIR 226
>gi|315657837|ref|ZP_07910717.1| chaperone protein ClpB [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315491634|gb|EFU81245.1| chaperone protein ClpB [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 918
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 36/295 (12%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQ 65
++ Q T ++ + A+ A G+A + P+H+ + +L S G+ + S
Sbjct: 2 ISMDQKFTTKSQEALATALRTAGAAGNAMLEPIHLLSALLEDSEGI----AFEVLSSVAD 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQP 124
A+ L LP +T G P S A++ A A Q RG
Sbjct: 58 ADAIGREVRRELASLPGAT-----GESVAEPQPSQAMLNVISAAGAKAQERGDD------ 106
Query: 125 LLAVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L++ + ++ V +++R+AG + +++ +++ + P ++ K+
Sbjct: 107 ----YVSTEHLLLGLAENEGRVGKILRDAGANDKKLRQAIKKIRGDAKVTSPNPEATFKA 162
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L+Q A K LDP+ R+ ++ VI+ L + K N V++GE
Sbjct: 163 LEKYGDDLTQRAMDGK-------LDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKT 215
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQR----VEEIKN 290
VV G+ +I GDVP++L+ + L +++ R + E+R +EEIKN
Sbjct: 216 AVVEGLAQRIVAGDVPDSLKHKHLIALDLAAMVAGAQYRGQFEERLKAVLEEIKN 270
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K SE L + L +++ QKD V ++N V + R+G R G F
Sbjct: 585 VGKLLRGESEKLLHMEEYLGQRLIGQKDAVRAVSNAVRRARAGVSDPNRPTGSF------ 638
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F I +S + + +
Sbjct: 639 ------LFLGPTGVGKTELAKALADFLFDDEKALTRIDMSEYGEKHSVA-----RLIGAP 687
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G V
Sbjct: 688 PGYVGYEEGGQLTEAVRRRPYGVVLLDEVEKAHPDVYDILLQVLDDGRLTDGQGRTVDFR 747
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 748 NVILVLTS 755
>gi|338536305|ref|YP_004669639.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
gi|337262401|gb|AEI68561.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
Length = 874
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 31/295 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A + + TLARR + Q P H+A +L G++ + + K
Sbjct: 7 TVKAQEAIHEGQTLARRADNPQYEPEHLAAALLGQKDGIVDPLLRKIGA---DVKLFAAR 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP M GG + L+ F +A E++ + L I
Sbjct: 64 LGEALQKLPR-----MQGGESAM--LGQRLLKTFDKA---------EDEAKSLKDEFISS 107
Query: 133 EQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L++++ D +V VM+ +G + +V S +++ + ++ ++ E L
Sbjct: 108 EHLLLALTHDKGAVGEVMKSSGVTRERVLSGLKEVRGSGRVTSQDAEATYQALEKYGRDL 167
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A + K LDP+ R+E++ ++ L + K N V++GE + G+
Sbjct: 168 TEAARSGK-------LDPVIGRDEEIRRCVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAR 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE L++ + + L + + R E E+R++ + + G I+
Sbjct: 221 RIVDGDVPEGLKNKRLVSLDLGAMVAGAKYRGEFEERLKAVLKEIADAAGEVILF 275
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 110/294 (37%), Gaps = 49/294 (16%)
Query: 576 LSSNRNSTPNSTSSSDIMEMEY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYD 629
L N+ + DI E+ V + E + L + + L K+V Q+ +
Sbjct: 522 LQKNQKFLKEEVDAEDIAEVVAKWTGIPVSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEA 581
Query: 630 IANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHN 686
++N V + RSG R G F F G K + AK LA +F +
Sbjct: 582 VSNAVRRARSGLQDPNRPIGSF------------IFLGPTGVGKTETAKALAEFLFDDDS 629
Query: 687 NFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLIED 740
V I +S + S R Y E + EAV P+ V L ++
Sbjct: 630 AMVRIDMSEYMEKHSVARLVGAPPG---------YVGYEEGGQLTEAVRRRPYTVVLFDE 680
Query: 741 VEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDG 800
+E+A + + ++ GR+ S G V + ++IL+ S +A + +
Sbjct: 681 IEKAHHDVFNVLLQILDEGRLTDSQGRTVDFKNTVLILTSNLGSQDIQAGMAGKDELDER 740
Query: 801 CEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQSIDDIGLLESVDKRIIFKIMEL 854
E A+ G L+ +D++ + E + K+ I++I++L
Sbjct: 741 TRNEVMDALRGHFRPEFLN-------------RVDEVVIFEPLRKKDIYRIVDL 781
>gi|393724192|ref|ZP_10344119.1| ATPase [Sphingomonas sp. PAMC 26605]
Length = 859
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 130/292 (44%), Gaps = 29/292 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H ++ P H+ +L G+ A L S + +A+
Sbjct: 6 FTDRAKGFLQSAQTVAIRMSHQRIAPDHILKALLEDEQGM--AAGLISAAGGDPKRAVSE 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
++AL+++PA + + G P + N V +A+ A + S ++ L+A+
Sbjct: 64 T-DLALSKIPAVSGS----GAQATPGLDNDTVRVLDQAEQIATKSGDSFVTVERLLVALA 118
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ L + + + ++ AG + + + +EQ + + + + +
Sbjct: 119 LSL---------NTAAGKALKTAGVTPEALNAAIEQVRNGRVADSAGAEDKFDALKKFAR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 170 DLTQAARDGK-------LDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVP+ L+D K + L + S R E E+R++ + + V++ G
Sbjct: 223 ALRIANGDVPDTLKDRKLMSLDMGSLIAGAKYRGEFEERLKGVLDEVKAAEG 274
>gi|365885016|ref|ZP_09424039.1| Chaperone [Bradyrhizobium sp. ORS 375]
gi|365286359|emb|CCD96570.1| Chaperone [Bradyrhizobium sp. ORS 375]
Length = 879
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 30/291 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP + + G Q +S+ L AF A+ + + +
Sbjct: 64 TEDALGKLPKVSGS----GAGQV-YLSSELARAFDAAEKAAEKAGDSF---------VTV 109
Query: 133 EQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+L++ ++ D ++ + G ++ + + +E +T ++ + +
Sbjct: 110 ERLLLGLVLDAKSETGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D + L L + + R E E+R++ + V + G
Sbjct: 223 LRIVNGDVPESLKDKRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEG 273
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|410945117|ref|ZP_11376858.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
frateurii NBRC 101659]
Length = 866
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 41/304 (13%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQ 65
Q T + ++ A T+A R H Q+TP H+ +L A++GL+R A P
Sbjct: 4 QKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAG----GDP-- 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
K ++ + AL +LP + GG P + + A+A + + Q
Sbjct: 58 -KVVQAANDAALAKLP-----KVQGGGAGQPQATPDFLRLLDSAEAAAKNAGDSHVAQ-- 109
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN---VEQAVSLEICSQSTPVSSNK 182
++L+++I S AG + K++ +E+AV+ +I T S+
Sbjct: 110 -------DRLLVAIAASNS------PAGKALVDGKADASALERAVA-QIRKGRTVTSA-- 153
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
S E+ L + A LDP+ R+E++ I+ L + K N V++GE
Sbjct: 154 SAENTFDALKKYARDVTAVAQAGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+V G+ +I GDVPEALR+ K + L + + R E E+R++ + V + G
Sbjct: 214 TAIVEGLALRIVNGDVPEALRNKKLMSLDMGALIAGAKFRGEFEERLKAVLKEVETAEGE 273
Query: 299 GIVL 302
I+
Sbjct: 274 IILF 277
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L +V Q+ + ++N V + R+G R G F
Sbjct: 551 VDRMLEGERAKLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQDPNRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA+ +F + I +S F A S
Sbjct: 605 ------LFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPGYVG 658
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 659 YDEGGV-----LTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFR 713
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 714 NTIIVLTS 721
>gi|158425824|ref|YP_001527116.1| ATPase AAA [Azorhizobium caulinodans ORS 571]
gi|158332713|dbj|BAF90198.1| AAA ATPase [Azorhizobium caulinodans ORS 571]
Length = 879
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A + A R GH Q P H+ +L GL A L S + L+L
Sbjct: 7 TERARGFVQSAQSYAVREGHQQFVPEHLLKVLLDDPEGL--CAGLVSRA----GGNLQLV 60
Query: 73 FN---VALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQPLLA 127
+ A+ +LP + GG Q +S L F A QA ++ G ++ LLA
Sbjct: 61 RDETEAAVRKLPK-----VQGGSGQV-YLSQGLARVFDAAEQAAKKAGDGYVTVERLLLA 114
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ IE E +++ G + + + +E +T ++ + +
Sbjct: 115 LTIEKET---------EAGKILARGGVTPQALNTAIEALRKGRTADTATAENAYDALKKY 165
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 166 ARDLTQAARDGK-------LDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVE 218
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I GDVPE+L++ L L + + R E E+R++ I V + G GI+L
Sbjct: 219 GLARRIVDGDVPESLKNKSLLALDMGALIAGAKYRGEFEERLKGILQEVTAAEG-GIILF 277
Query: 304 LGDL 307
+ ++
Sbjct: 278 IDEM 281
>gi|373459155|ref|ZP_09550922.1| ATP-dependent chaperone ClpB [Caldithrix abyssi DSM 13497]
gi|371720819|gb|EHO42590.1| ATP-dependent chaperone ClpB [Caldithrix abyssi DSM 13497]
Length = 872
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 28/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A + +A L G Q+ P H+ +L+ S G+ + A ++ + PL L+
Sbjct: 6 FTIKAQEALAEAQRLVTEYGQQQIEPEHILKALLSDSEGVAQ-AIVKKYGVPL--PQLDQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVA-AFKRAQAHQRRGSIENQQQPLLAVKI 130
A+++ P + GG +N ++ AF A+A + + + LLA+
Sbjct: 63 KLEQAIDKFPRVSG----GGQVYLSRRANEILNNAFNEARAL--KDEFVSTEHLLLAISE 116
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E D R++ G + + + + + + P + ++ E
Sbjct: 117 E---------KDGEAGRILASFGLTREMILRALMEIRGNQRVTDQNPEAKYQALERYARD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R+E++ V++ L + K N V++G+ +V G+
Sbjct: 168 LTELARKGK-------LDPVIGRDEEIRRVLQVLSRRTKNNPVLIGDPGVGKTAIVEGIA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I GDVPE L+D + + L I S
Sbjct: 221 HRIVNGDVPENLKDKRLVALDIGSL 245
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L K+V Q++ + +A+ V + R+G R G F
Sbjct: 551 VQRMLESEKEKLLKMEDRLRKRVVGQEEAIRAVADAVRRSRAGLADQNRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N + I +S + R+ SR
Sbjct: 605 ------IFLGSTGVGKTELAKALAEFLFDDENAMIRIDMSEYM---------ERHSVSRL 649
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
S Y E + E V P+ V L++++E+A + +E GR+ + G
Sbjct: 650 IGSPPGYVGYEEGGQLTEQVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDNKGRT 709
Query: 769 VSLGDAIVILSC 780
V + I+I++
Sbjct: 710 VDFKNTIIIMTS 721
>gi|422759400|ref|ZP_16813162.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
gi|322412235|gb|EFY03143.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 763
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTSSV 631
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
+DP+ R++++ VIE L + K N V++GE VV G+ KI G VP L+
Sbjct: 135 DIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQRVEEIKNLVR 293
+ + L + S R + E+R++++ +R
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIR 226
>gi|408397120|gb|EKJ76270.1| hypothetical protein FPSE_03525 [Fusarium pseudograminearum CS3096]
Length = 924
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 40/279 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T A V+ AM LA + GH+Q+ P+H+A ++L ++ L R
Sbjct: 7 FTDRAQKAVEDAMALAEQYGHSQLVPVHLAVSLLDPPADPSKDQQNGPPPTSTLFRQVVE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRG 116
++H P + + L RLP+ P H P N L A + +
Sbjct: 67 RAHGDP---QIFDRALKKILVRLPSQDPPP---EHVSLAPQFHNVLRKAMDLQKVQK--- 117
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
I ++ LI ++ ++ ++ ++EA ++ +++AV ++
Sbjct: 118 ----------DTYIGVDHLITALSEEATIQAPLKEANVPKAKL---IQEAVQAIRGTKRV 164
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E N + T T++++ + +DP+ R E++ V+ L + K N V++G
Sbjct: 165 DSKTADTEEENENLAKFTIDMTEMAREK-KMDPVIGREEEIRRVVRILSRRTKNNPVLIG 223
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E V+ G+ ++ DVP+ L+ K L L + +
Sbjct: 224 EPGVGKTTVIEGLAQRVVNRDVPDNLKSCKLLSLDVGAL 262
>gi|402301957|ref|ZP_10821078.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. FOBRC9]
gi|400381242|gb|EJP34045.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. FOBRC9]
Length = 857
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 39/291 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACLQSHSHPLQ 65
Q TA + ++ A +A R H ++T HV + GLL T C +
Sbjct: 3 QDKYTARTLAALQSAQQIAAMRYHQEITSAHVLLALAKEPEGLLATIFSVC------GVD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
L+ L +PA T LG +S +V RA+ R S++++
Sbjct: 57 LPMLKARLEKELASIPAVRGTNRLG-------MSMDMVRVLGRAEELAR--SMKDEY--- 104
Query: 126 LAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L+++++ D S V ++ RE G + + V+ +++ + S + P +S
Sbjct: 105 ----VSTEHLLLALVTDGSDEVQKIAREFGLTKSSVQDAIKKNRKQNVTSDN-PEEGYQS 159
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E ++ A A K LDP+ R+E++ IE L + K N V++GE
Sbjct: 160 LEKYGRDMTAAARANK-------LDPVIGRDEEIRRTIEILSRRTKNNPVLIGEPGVGKT 212
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 213 AIVEGLARRIVAGDVPESLKNKTLYALDMGALVAGAKFRGEFEERLKGVLN 263
>gi|269140172|ref|YP_003296873.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
gi|267985833|gb|ACY85662.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
Length = 857
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+H+ + ML G +R + S + A +
Sbjct: 6 LTNKFQLALADAQSLALGRDNQFIEPIHLMSAMLGQDGGTVRPLLV---SAGVDISAFQQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAF----KRAQAHQRRGSIENQQQPLLA 127
A+ RLP T GG Q P SN L+ K AQ H
Sbjct: 63 SLEQAIARLPQVEGT---GGDVQ-P--SNELIRVLNLCDKLAQKHS-------------D 103
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I E I++ +++ ++ +++ AG S+ ++ + VEQ E ++ +
Sbjct: 104 TYISSELFILAAMEERGKLADMLKAAGASAQKLNAAVEQLRGGEKVDDQNAEDQRQALKK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 YTIDLTERAEQGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VPE L+ + L L + + R E E+R++ + N
Sbjct: 217 EGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L ++V Q + V ++N + + R+G R G F
Sbjct: 548 VSRMLEGEREKLLRMEDELHRRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|94310897|ref|YP_584107.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
metallidurans CH34]
gi|93354749|gb|ABF08838.1| ATP-dependent Clp protease, ATP-binding subunit ClpB (protein
disaggregation chaperone) [Cupriavidus metallidurans
CH34]
Length = 862
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + +A +LA + + P H+ +LA G RT ++ + L+
Sbjct: 6 LTTRFQEALAEAQSLALGNDNQYIEPQHLLRALLAQDDGAARTLLSRAG---VNVGGLQS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A++RLP T Q N L+ A ++ +I+ Q + +
Sbjct: 63 ALDAAIHRLPQVQGT----NEVQVGRDLNNLLNATEKE-------AIKRNDQFIAS---- 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ RE G S +++ + + + + S ++ + +
Sbjct: 108 -ELFLLAVSDDKGETGRIARENGLSRKSLEAAITAVRGGDTVNSADAESQREALKKYTVD 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTERARAGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L ++ R E E+R++ + N V G+ IV
Sbjct: 220 QRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVF 275
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VAKMMQGEREKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGL---------SDENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K L+ +F S + + I +S F + S
Sbjct: 602 GSFLFLGPTGVGKTELCKALSEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYAVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|15836983|ref|NP_297671.1| ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
gi|54035911|sp|Q9PGC1.1|CLPB_XYLFA RecName: Full=Chaperone protein ClpB
gi|9105213|gb|AAF83191.1|AE003889_8 ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
Length = 861
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSH-PLQCKALE 70
LT+ + + A +LA R H + P+HV + +L G R +Q+ + PL + L
Sbjct: 6 LTSRFQNALADAQSLAVGRDHTIIEPVHVFSALLDQQGGSTRPLLMQAGVNVPLLRERLT 65
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKR----AQAHQRRGSIENQQQPLL 126
+ P + G + SN L F R AQ H + +
Sbjct: 66 EILE----------ALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQ---------FM 106
Query: 127 AVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
A E +++++DD + + +R AG ++++ +++ E ++ E
Sbjct: 107 AS----EWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRGGETVQTENAEEQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 163 KYTIDLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE LR + L L + + R E E+R++ + N + GR I+
Sbjct: 216 VEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVIL 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|300175197|emb|CBK20508.2| unnamed protein product [Blastocystis hominis]
Length = 880
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 128/297 (43%), Gaps = 34/297 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
TA + +A +AR + +VT +H+A ML G C ++ + + L+
Sbjct: 8 FTAYTQDNISEAFNVARSNSNPEVTNVHLAIAMLKDPKGFPYLVCQKAE---IDVELLKK 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
N L +LP P + +S AL AQ A ++ S +
Sbjct: 65 KLNEQLKKLPKQDPLP------EELYVSGALGKTLSIAQENAASQKDS-----------R 107
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ + ++ ++ +D ++ + G + ++ + +++ + P + + +
Sbjct: 108 VAQDHVLAAMFNDSTMKSLFESVGLTKKKLDNAIKEKRGSAQANSDAPEGAYDALNQYGI 167
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + A K+ DP+ R+E++ VI L + K N V++GE +V G+
Sbjct: 168 DLVKQAEEGKI-------DPVIGRDEEIRRVIRILCRRTKNNPVLIGEPGVGKTAIVEGL 220
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
++I +GDVPE LR V+ + L + + R E E+R++ + N V+ G+ I+
Sbjct: 221 ANRIVQGDVPETLR-VRLISLDLGALIAGAKYRGEFEERLKAVMNEVKQSEGKIILF 276
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 29/223 (13%)
Query: 605 NSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQG 664
+ + L L L +KV Q + ++N +L+ R+G R E K F G
Sbjct: 546 DRDRLIQLPQRLSEKVVGQSAAIEAVSNAILRSRAGLSR---------EGKPTGCFLFLG 596
Query: 665 VDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE-- 722
K ++AK+LA +F + V I +S + + S Y E
Sbjct: 597 PTGVGKTELAKKLALELFNDEKHIVRIDMSEYMEKHSVS-----RLVGAPPGYVGYEEGG 651
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS--- 779
EAV P+ V L+++VE+A F + + GR+ G V + ++I++
Sbjct: 652 ELTEAVRRRPYNVILLDEVEKAHPDVWNLFLQVFDDGRLTDKQGRTVDFSNTVIIMTSNL 711
Query: 780 -----CESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVS 817
E + R T+ CEE A +P +S
Sbjct: 712 GADILLEDVERQRR-----TRSNEGLCEEYPSARRVAVTPGIS 749
>gi|344171531|emb|CCA84146.1| chaperone [Ralstonia syzygii R24]
Length = 862
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + A +LA + + P+H+ ML G T L S + + KALE+
Sbjct: 6 LTTRFQEALADAQSLALGNDNPYIEPVHLLLAMLRQPDGA--TKNLLSRAG-VNAKALEV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP G Q +L+ QA ++ G + P LA ++
Sbjct: 63 ALDNAVKRLPQVQG----GEQVQVGRDLGSLL------QATEKEGI--KRGDPFLASEL- 109
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
++++ DD R+ RE G + +++ ++ + + S ++ + +
Sbjct: 110 ---FLLAVADDKGEAGRIAREHGLARRALEAAIDAVRGGQTVGSAEAESQREALKKYTID 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTEQARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+L++ + L L ++ R E E+R++ + N + G+ I+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILF 275
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGI---------SDENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S +
Sbjct: 602 GSFLFLGPTGVGKTELCKALAGFLFDSEEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|331006072|ref|ZP_08329408.1| ClpB protein [gamma proteobacterium IMCC1989]
gi|330420109|gb|EGG94439.1| ClpB protein [gamma proteobacterium IMCC1989]
Length = 887
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 34/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + + A +LA R H ++ PLH+ + ML G +R Q+ L
Sbjct: 6 LTNQLQTALSDAQSLALGRDHTRLEPLHILSAMLNQQGGTVRPLLAQAG---FDTAVLRN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L+ LP S G Q P + L A K++Q + I
Sbjct: 63 ELAKQLDDLPKVQSP---NGDVQMSPEMGRLLNLADKKSQDNG-------------DAYI 106
Query: 131 ELEQLIISILDDPSVS--RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
E LI+ ++D S S +++ G +++ +E E + ++ E
Sbjct: 107 SSESLILVAMEDGSTSLGKILLAHG-DIKRLQQAIEMVRGGETVDNPDAEENRQALEKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L+ A A K LDP+ R++++ I+ L + K N V++GE ++ G
Sbjct: 166 VDLTSQAEAGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIIEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VP+ L+D + L L + S R E E+R++ + N + GR I+
Sbjct: 219 LAQRIVNGEVPDGLKDKRVLSLDLGSLLAGAKFRGEFEERLKAVINELSKQEGRIIIF 276
>gi|427407254|ref|ZP_18897459.1| ATP-dependent chaperone ClpB [Selenomonas sp. F0473]
gi|425707729|gb|EKU70773.1| ATP-dependent chaperone ClpB [Selenomonas sp. F0473]
Length = 857
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACLQSHSHPLQ 65
Q TA + ++ A +A R H ++T +HV + GLL T C +
Sbjct: 3 QDKYTARTLAALQSAQQIAAMRYHQEITSIHVLLALAKEPEGLLATIFSVC------GVD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
L+ L +PA T LG + +V RA E Q +
Sbjct: 57 LPMLKARLEKELASIPAVRGTNRLG-------MGMDMVRVLGRA---------EELAQSM 100
Query: 126 LAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L+++++ D S V ++ RE G + + V+ +++ + S + P +S
Sbjct: 101 KDEYVSTEHLLLALVTDGSDEVQKIAREFGLTKSSVQDAIKKNRKQNVTSDN-PEEGYQS 159
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E ++ A A K LDP+ R+E++ IE L + K N V++GE
Sbjct: 160 LEKYGRDMTAAARANK-------LDPVIGRDEEIRRTIEILSRRTKNNPVLIGEPGVGKT 212
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 213 AIVEGLARRIVAGDVPESLKNKTLYALDMGALVAGAKFRGEFEERLKGVLN 263
>gi|410634200|ref|ZP_11344837.1| chaperone protein ClpB [Glaciecola arctica BSs20135]
gi|410146056|dbj|GAC21704.1| chaperone protein ClpB [Glaciecola arctica BSs20135]
Length = 910
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 42/175 (24%)
Query: 176 TPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVV 233
+P + K + N T A K LDPI R+E++ +I+ LM +R+ N ++
Sbjct: 183 SPATMGKQEALNQFTTDLTEQAAKGE-----LDPIIGRDEEIRQLIDILMRRRQNNPILT 237
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSI------SSFRHMNRVEVEQRVEE 287
GE VV G +I KGDVP AL+ VK L L I +S + ++Q +EE
Sbjct: 238 GEAGVGKTAVVEGFAHRINKGDVPPALQGVKLLCLDIGLLQAGASMKGEFENRLKQVIEE 297
Query: 288 IK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
+K NL++ L RG + +G WAE++
Sbjct: 298 VKSSTTPIIMFIDETHTLVGAGGAAGTGDAANLLKPALARGELRTIGATTWAEYK 352
>gi|420443272|ref|ZP_14942200.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Helicobacter
pylori Hp H-41]
gi|393060779|gb|EJB61648.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Helicobacter
pylori Hp H-41]
Length = 856
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 167/822 (20%), Positives = 306/822 (37%), Gaps = 163/822 (19%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T + + A+ LA +A+VTPLH+ ML S G+L A P+ +AL+L
Sbjct: 7 MTDQLHETLDSAIALALHYKNAEVTPLHMLFAMLNNSQGILIQAL---QKMPVDIEALKL 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--GSIENQQQPLLAVK 129
LN+ + Q ++ AL+ + + AQ + S LLA
Sbjct: 64 SVQSELNKFAKVSQIS-----KQNIQLNQALIQSLENAQGLMAKTGDSFIATDAYLLANM 118
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E ++ LD + + + T N + S+ +S E +
Sbjct: 119 NLFESVLKPYLDTKELQKTLESLRKGRTIQDKNDD--------------SNLESLEKFGI 164
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A K LDP+ R+E+++ +++ L+ K K N +++GE VV G+
Sbjct: 165 DLTQKALENK-------LDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGL 217
Query: 248 IDKIEKGDVPEAL--RDVKCLPLSISSFRHMNRVEVEQR----VEEIK------------ 289
+I +VP+ L + V L LS+ R E E+R +EE+K
Sbjct: 218 AQRIVNKEVPKTLLNKRVVALDLSLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEI 277
Query: 290 ----------------NLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIME 333
N+++ L RG + +G A++ ++ R Y+
Sbjct: 278 HTIVGAGASEGGMDAANILKPALARGELHTIG--------ATTLKEYRKYFEK------- 322
Query: 334 IGKLVCGIGENARFW--LMGIATFQSYMRCKSGHPSLETLWSLHPLTIPAGSLSLSLITT 391
+ RF L+ + ++ G ETL + H +TI +L S +
Sbjct: 323 ------DMALQRRFQPILLNEPSINEALQILRGLK--ETLETHHNITINDSALIASAKLS 374
Query: 392 DSDLQSQSTSKKA----ESGVSWLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSD 447
+ + KA + G + L + E E +L+ + E E ++L+ N +
Sbjct: 375 SRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQRLEMEKQALEME--NKE 432
Query: 448 SPTSSLPAWLQQYKNEKKATLSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSA 507
S + L++ N K+ + + + + K+ + + + +ER F
Sbjct: 433 SNHKHMQEILKELSNLKEEKIQLEAQFENEKKVFKEISRLKMEMESLKKEAER---FKRN 489
Query: 508 SPSSSTSGFSYDQQYPNFHK---THRDWAVVEPKQSWREHHFLFSHEASDKSTSE-PSLR 563
Y + N K R W ++ +++ L + ++ + +E S
Sbjct: 490 GDYQQAGEIEYSKIPENKKKEEELQRKW------EAMQQNGALLQNALTENNIAEIVSQW 543
Query: 564 LYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEYVHKFKELNSENLTSLCNALEKKVPWQ 623
+IP +++ L S +N N S L+K+V Q
Sbjct: 544 THIP----IQKMLQSEKNRVLNIESE--------------------------LQKRVVGQ 573
Query: 624 KDTVYDIANTVLKCRSG---TMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARL 680
+ + IA + + ++G + + G F F G K + AK LA+
Sbjct: 574 EKALKAIAKAIKRNKAGLSDSNKPIGSF------------LFLGPTGVGKTESAKALAQF 621
Query: 681 VFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--RFAEAVSNNPHRVFLI 738
+F S N + I +S + A S Y E + EAV P+ V L+
Sbjct: 622 LFDSDKNLIRIDMSEYMEKHAIS-----RLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLL 676
Query: 739 EDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
++VE+A + ++ G + S G V + I+IL+
Sbjct: 677 DEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTS 718
>gi|149927826|ref|ZP_01916077.1| probable atp-dependent protease (heat shock protein) [Limnobacter
sp. MED105]
gi|149823448|gb|EDM82679.1| probable atp-dependent protease (heat shock protein) [Limnobacter
sp. MED105]
Length = 862
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + V P HV ML G +R ++ +P + L
Sbjct: 6 LTTKFQEALADAQSLAVGKDNPTVEPAHVLLAMLKQGEGSVRGVISKAGGNP---QVLVK 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLLAVKI 130
+N LP + G Q I + L AA Q+RG +A ++
Sbjct: 63 GVEAEVNNLPQVANN---AGQIQ---IGSKLQAALNLTDKEAQKRGD------QFIASEL 110
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
L+ + D ++RVM+EAG ++ + + +EQ + S ++ + +
Sbjct: 111 ---FLLACLQDSTGLARVMKEAGLNAQSLNTAIEQVRGGAAVDSADGESQREALKKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERARMGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VP+ L++ + L L ++ R E E+R++ + V + G+ IV
Sbjct: 221 QRIVNGEVPDTLKNKRVLVLDMALLLAGAKYRGEFEERLKAVLKDVAADEGQTIVF 276
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + AL +V Q + V +++ + + R+G D + K
Sbjct: 551 VSKMLQGERDKLLQMEAALHMRVVGQDEAVTLVSDAIRRSRAG-------LSDPN--KPL 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S ++ V I +S F S
Sbjct: 602 GSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRIDMSEFMEKHTVSRLVGAPPGYVGYDE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LS 779
++
Sbjct: 719 MT 720
>gi|392329616|ref|ZP_10274232.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus canis FSL Z3-227]
gi|391419488|gb|EIQ82299.1| ATP-dependent endopeptidase Clp ATP-binding subunit clpE
[Streptococcus canis FSL Z3-227]
Length = 763
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V KE L +L N L+ V Q D V IA + + R G R G F
Sbjct: 437 VGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSF------ 490
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K+LA +FGS +N + +S + A +
Sbjct: 491 ------LFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVA-----KLVGAP 539
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V NP+ + L+++VE+A F + ++ GR+ G VS
Sbjct: 540 PGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFK 599
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
D I+I++ + + +S A S G GAA EG + SV
Sbjct: 600 DTIIIMTSNAGTGKSEA--------SVGF----GAAREGRTNSV 631
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
+DP+ R+E++ VIE L + K N V++GE VV G+ KI G VP L+
Sbjct: 135 DIDPVIGRDEEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGK 194
Query: 264 KCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
+ + L + S R + E+R +EEI+N
Sbjct: 195 QVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN 227
>gi|338211063|ref|YP_004655114.1| ATP-dependent chaperone ClpB [Runella slithyformis DSM 19594]
gi|336304880|gb|AEI47982.1| ATP-dependent chaperone ClpB [Runella slithyformis DSM 19594]
Length = 875
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQ--CKALE 70
T +A V+++A+ +A+ +N A TG + A L+ + Q K L
Sbjct: 7 TIKAQEVIQRAVQIAQ------------SNQQQAVETGHVLQAILEDDPNTSQFLMKKLN 54
Query: 71 LCFNVALNRLPASTST-PMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
+ V R+ A+ + P + G ISN L +AF++AQ + + E V
Sbjct: 55 VQPQVLQTRIQATVNAYPKVAGTAATEYISNDLNSAFQKAQTYLKEFQDE-------FVS 107
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSN------KS 183
+E+ L ++ D + +R+M+EAGF ++ + ++ E+ ++ PV +S
Sbjct: 108 VEMLFLGLATGKD-ATARLMQEAGFKEKELLAAIK-----ELRGKNNPVKDQNAEAKYRS 161
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L++ A A K+ DP+ R++++ V++ L + K N +++GE
Sbjct: 162 LERYSKNLNEMARAGKI-------DPVIGRDDEIRRVLQILARRTKNNPMLLGEPGVGKT 214
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSIS 271
+V G+ +I +GDVPE L+ + + L +
Sbjct: 215 AIVEGLAQRIVQGDVPEQLKTKEIVSLDMG 244
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L +L L+K+V Q++ + +A+ V + R+G R G F
Sbjct: 546 VSKMLQSERDKLLNLETELQKRVAGQEEAIEAVADAVRRSRAGLQDPKRPIGSF------ 599
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F N V I +S + R+ SR
Sbjct: 600 ------LFLGPTGVGKTELAKTLANYLFNDENAMVRIDMSEYQ---------ERHSVSRL 644
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L++++E+A + ++ GR+ + G
Sbjct: 645 VGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDVWNIMLQVLDDGRLTDNKGRM 704
Query: 769 VSLGDAIVILSC 780
+ + I+I++
Sbjct: 705 ANFKNTIIIMTS 716
>gi|415706171|ref|ZP_11461245.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 0288E]
gi|388055063|gb|EIK77984.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 0288E]
Length = 864
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+ A +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLTALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEI 288
V G+ +I GDVP L++ + + L ++S + R E E+R++ +
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAV 263
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|444376517|ref|ZP_21175759.1| ClpB protein [Enterovibrio sp. AK16]
gi|443679337|gb|ELT85995.1| ClpB protein [Enterovibrio sp. AK16]
Length = 857
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 28/275 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ ++L + +R + Q ++ + L++
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMVSLLNQDSSTIRPLMTLLNVDLTQLRS---SLSELLDK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP T T GG Q L + ++ I ++ L AV+
Sbjct: 71 LPKVTGT---GGDVQLSHSMGMLFNMCDKLSQKRKDKYISSELFILAAVE---------- 117
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
D ++ ++R G ++ +V+ +++ + + + ++ E + L++ A K
Sbjct: 118 -DKGALGELLRSLGLTTKKVEDAIDKVRGGQAINDPNAEEARQALEKFTIDLTEKAEQGK 176
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R+E++ ++ L + K N V++GE +V G+ +I G+VP
Sbjct: 177 -------LDPVIGRDEEIRRTVQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIVNGEVP 229
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
E LR+ + L L + S R E E+R++ + N
Sbjct: 230 EGLRNKRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L +V Q + V +AN + + R+G R G F
Sbjct: 548 VAKMLEGEKEKLLQMEDELHGRVIGQSEAVTSVANAIRRSRAGLADPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSLAEFLFDSSDAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +A
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNLLLQVLDDGRLTDGQGRTVDFRNA 712
Query: 775 IVILSCESFSSR 786
+VI++ S R
Sbjct: 713 VVIMTSNLGSDR 724
>gi|425896527|ref|ZP_18873118.1| type VI secretion ATPase ClpV2 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397881963|gb|EJK98451.1| type VI secretion ATPase ClpV2 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 884
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQPLLAKLNIERLKDFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P S + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEEPASGKPAAPGESLLQRFTHNLTQQAR-EGKLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE VV G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAVVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|357420426|ref|YP_004933418.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
gi|355397892|gb|AER67321.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
Length = 870
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 32/300 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + A A +RGH +V H+ +L GL+ ++ PL A+
Sbjct: 6 LTQKSQEALADAQKEAIQRGHREVDNEHLLLALLKQENGLI-PRLMRKMDVPLD--AMIN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L R P+ + G + LVAA E + + L +
Sbjct: 63 AVEKELARRPSIAGASLEAGKIYISGRLGAVLVAA-------------EEKAKKLKDEYV 109
Query: 131 ELEQLIISILDDPSVS----RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+E L +++++P S +++ + G + +++ + + P S+ ++ E
Sbjct: 110 SVEHLFSALMEEPDPSSPTRKILADFGVDEDRFFKTLQEVRGNQRVQSADPESTYEALEK 169
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A A K LDP+ R+E+V VI L + K N V++GE +V
Sbjct: 170 YGRDLVALARAGK-------LDPVIGRDEEVRRVIRILSRRTKNNPVLIGEPGVGKTAIV 222
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +GDVPE LRD + L + + R E E+R++ + N V+ GR I+
Sbjct: 223 EGLAQRIVRGDVPEGLRDRSIVALDMGALVAGAKYRGEFEERLKAVLNEVKRSEGRIILF 282
>gi|345870658|ref|ZP_08822609.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
gi|343921471|gb|EGV32187.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
Length = 865
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 32/290 (11%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q LTA+ + A +LA R H + P+H+ +L G +R ++ + Q ++
Sbjct: 3 QDKLTAKFQMALGDAQSLALGRDHQFIEPVHLMIALLDQEGGTIRHLLSRADVNTNQLRS 62
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
AL+ LP +GG +S L K AQ QR N Q
Sbjct: 63 ---ALGEALDHLPMVEG---VGGDVHLSNDLSRLLNLTDKLAQ--QR-----NDQY---- 105
Query: 128 VKIELEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E +++ L+D ++ +REAG S + V+ V+ + +S E
Sbjct: 106 --VSSELFVLAALEDKGALGNALREAGASQSAVEQAVQSVRGGQKVDDPNAEEQRQSLEK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R++++ ++ L + K N V++GE +V
Sbjct: 164 YTIDLTERAEQGK-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLV 292
G+ +I G+VPE L+ + L L +++ R E E+R++ + N V
Sbjct: 217 EGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERLKAVLNDV 266
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E E L + A+E++V Q + V +++ + + R+G R G F
Sbjct: 548 VSRMLEGEREKLLRMEQAIEQRVVGQNEAVRAVSDAIRRSRAGLSDPARPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSLASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EA+ P+ + L+++VE+A + ++ GR+ G V +A
Sbjct: 656 YEEGGYL---TEAIRRRPYSLILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNA 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|386398643|ref|ZP_10083421.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
gi|385739269|gb|EIG59465.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
Length = 879
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + V+ A +LA R GH Q + LHV +L + GL A L + +A+
Sbjct: 7 TERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGL--AAGLIDRAGG-SSRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAV 128
ALN++P + GG Q P ++ AA K A ++ G S ++ LL +
Sbjct: 64 TEDALNKVPKVSG----GGAGQIYLAPELARTFDAAEK---AGEKAGDSFVTVERLLLGL 116
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E ++ + G + + + +E +T ++ + +
Sbjct: 117 ALE---------KTSEAGAILAKGGVTPQNLNAAIEALRKGRTADSATAENAYDALKKYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+ +I GDVPE+L+D K L L + S R E E+R++ +
Sbjct: 221 LALRIVNGDVPESLKDKKLLSLDLGSLIAGAKYRGEFEERLKAV 264
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQAEAVRAVATAVRRSRAGLQDPNRPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|336405882|ref|ZP_08586549.1| chaperone ClpB [Bacteroides sp. 1_1_30]
gi|335936349|gb|EGM98280.1| chaperone ClpB [Bacteroides sp. 1_1_30]
Length = 862
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEPIILALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|294055770|ref|YP_003549428.1| ATP-dependent chaperone ClpB [Coraliomargarita akajimensis DSM
45221]
gi|293615103|gb|ADE55258.1| ATP-dependent chaperone ClpB [Coraliomargarita akajimensis DSM
45221]
Length = 870
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 30/302 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++A +++A TLAR+ G ++ H+ ++ G++ + P A+EL
Sbjct: 8 FTEKSAFAIQEAQTLARQHGQQEIDVWHLLLALVQQEGGIVPGLLSRMQVTP---SAVEL 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L LP + T + IS++L A A A + R S++++ +
Sbjct: 65 AGQRELRALPKVSGTV----NASQVYISSSLQQAL--AAAEKARVSMQDE-------FVS 111
Query: 132 LEQLIISILD--DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L + +L+ + ++ G V + +E A + + + TP + ++ E +
Sbjct: 112 TEHLFLGLLEVKHSKLIAFFQQFGLERDAVLAALESARAGQKVTSRTPETGFEALEKYGI 171
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L + A K +DP+ R++++ V+ L K K N V++GE +V G+
Sbjct: 172 DLVEQARLGK-------MDPVIGRDDEIRRVVRILSRKTKNNPVLIGEPGVGKTAIVEGL 224
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
+I +GDVPE L+D L + S R E E+R++ + V++ GR I+L +
Sbjct: 225 AQRIVRGDVPEGLKDKTIFALDMGSLVAGAKYRGEFEERLKAVLAEVKNSDGR-ILLFID 283
Query: 306 DL 307
+L
Sbjct: 284 EL 285
>gi|405981629|ref|ZP_11039955.1| ATP-dependent chaperone ClpB [Actinomyces neuii BVS029A5]
gi|404391524|gb|EJZ86587.1| ATP-dependent chaperone ClpB [Actinomyces neuii BVS029A5]
Length = 861
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 155/362 (42%), Gaps = 39/362 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ V A+ A G+ QV PLH+ N +L G+ + + Q A
Sbjct: 5 LTTKSQEAVTAALQAASAAGNPQVEPLHLLNVLLEDEGGIALALLEAAGADRKQIGA--- 61
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL LP+S+ + P+ S AL+ QA + G++ ++ +
Sbjct: 62 HVRKALVALPSSSGS-----SVSEPSTSRALLNVI--TQASESAGAMGDEY-------VS 107
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L+ ++ PS + +AG ++++ ++ Q+ PV+S + + +
Sbjct: 108 TEHLLQALAKVPSAAAEALKAGGATSEALE-----AAMPKIRQNGPVTSPNPEGTFEALK 162
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
T+V+K LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 163 KYGRDLTQVAKDG-KLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+LRD + + L IS+ R E E+R + + V+S G+ I+ + +L
Sbjct: 222 RIVAGDVPESLRDKRLISLDISAMLAGAKYRGEFEERFKAVLAEVKSADGQ-IITFIDEL 280
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
+ SE M+ G ++ + L+G T Y P+
Sbjct: 281 HTVVGAGAGSEGA-----------MDAGNMLKPMLARGELRLVGATTLDEYRENIEKDPA 329
Query: 368 LE 369
LE
Sbjct: 330 LE 331
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
K E + L + + + +++ QK V +A+ V + R+G R G F
Sbjct: 555 KLLEGEQDKLLHMEDVIGERLIGQKKAVQVVADAVRRSRAGVSDPDRPTGSF-------- 606
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K ++AK LA +F + V I +S +S + S
Sbjct: 607 ----MFLGPTGVGKTELAKSLADFLFDDEHALVRIDMSEYSEKHSVS-----RLVGAPPG 657
Query: 717 SCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y E + EA+ P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 658 YVGYDEGGQLTEAIRRRPYSVVLLDEVEKAHPEIFNILLQVLDDGRLTDGQGRTVDFRNT 717
Query: 775 IVILSC 780
I++L+
Sbjct: 718 ILVLTS 723
>gi|332880579|ref|ZP_08448253.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357046056|ref|ZP_09107686.1| ATP-dependent chaperone protein ClpB [Paraprevotella clara YIT
11840]
gi|332681567|gb|EGJ54490.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355531062|gb|EHH00465.1| ATP-dependent chaperone protein ClpB [Paraprevotella clara YIT
11840]
Length = 866
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 126/296 (42%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A +++A+ L + RG + P H+ +L + + + +E
Sbjct: 6 FTIKAQEAIQEAVNLVQARGQQAIEPEHLLAGILKVGENV---TNFLFQKLGVNSRQIEQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
LP + GG P +S RAQ + +G E +
Sbjct: 63 VLESQTASLPK-----VQGGE---PYLSRESNEVLTRAQDYASKGGDEF---------VS 105
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S SR++++AG + ++ S V + + V+S S E
Sbjct: 106 LEPMLLALLTVKSTASRILKDAGITEKELASAVNE------LRKGEKVTSQNS-EDTYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LNKYAKNLIEEARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L+D + L + + + E E+R++ + N V GR I+
Sbjct: 219 HRILRGDVPENLKDKQLYSLDMGALIAGAKYKGEFEERLKSVINEVTKSEGRIILF 274
>gi|407775613|ref|ZP_11122906.1| ATP-dependent chaperone ClpB [Thalassospira profundimaris WP0211]
gi|407281290|gb|EKF06853.1| ATP-dependent chaperone ClpB [Thalassospira profundimaris WP0211]
Length = 863
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
+ T + ++ A +LA R H Q P+H+ +L GL S P A
Sbjct: 4 ENFTDRSKGFLQSAQSLALRENHQQFVPIHLLKVLLDDEEGLAANLIKASGGKP--KLAQ 61
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
E C L +LP + GG+ Q +S+ +AQ ++
Sbjct: 62 ERCAQ-ELAKLPKVS-----GGNGQI-YLSSEFARLIDQAQEVAKKAGDSF--------- 105
Query: 130 IELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ E+L+++I DP + +V+ +AG ++ + + +I T S+ + +
Sbjct: 106 VTAERLLLTIALDPKSTAGKVLADAGVTAQALNGAIN-----DIRKGRTADSAGAENQYD 160
Query: 188 VLV-----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
L L++ A K LDP+ R+E++ ++ L + K N V++GE
Sbjct: 161 ALKKYARDLTEAAREGK-------LDPVIGRDEEIRRAVQVLSRRTKNNPVLIGEPGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ G+ +I KGDVPE L+D K L L + + R E E+R++ + + + S G+
Sbjct: 214 TAIAEGLALRIVKGDVPETLKDKKLLSLDLGALIAGAKFRGEFEERLKAVLSEIESEAGQ 273
Query: 299 GIVLNLGDL 307
+VL + +L
Sbjct: 274 -VVLFIDEL 281
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L K+V Q D V I+N V + R+G R G F
Sbjct: 547 VDKMLEGEREKLLEMEDTLRKRVVGQDDAVRSISNAVRRARAGLQDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA+ +F V I +S F A +
Sbjct: 601 ------LFLGPTGVGKTELTKALAQFLFDDEQAMVRIDMSEFMEKHAVA-----RLIGAP 649
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 650 PGYVGYEEGGSLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDEGRLTDGQGRVVDFR 709
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 710 NTLIILTS 717
>gi|262407259|ref|ZP_06083807.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22]
gi|294644668|ref|ZP_06722418.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CC 2a]
gi|294809071|ref|ZP_06767793.1| ATP-dependent chaperone protein ClpB [Bacteroides xylanisolvens SD
CC 1b]
gi|298482679|ref|ZP_07000863.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. D22]
gi|345509693|ref|ZP_08789285.1| chaperone ClpB [Bacteroides sp. D1]
gi|423212615|ref|ZP_17199144.1| chaperone ClpB [Bacteroides xylanisolvens CL03T12C04]
gi|229446455|gb|EEO52246.1| chaperone ClpB [Bacteroides sp. D1]
gi|262354067|gb|EEZ03159.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22]
gi|292640002|gb|EFF58270.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CC 2a]
gi|294443796|gb|EFG12541.1| ATP-dependent chaperone protein ClpB [Bacteroides xylanisolvens SD
CC 1b]
gi|295087149|emb|CBK68672.1| ATP-dependent chaperone ClpB [Bacteroides xylanisolvens XB1A]
gi|298271142|gb|EFI12719.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. D22]
gi|392694473|gb|EIY87700.1| chaperone ClpB [Bacteroides xylanisolvens CL03T12C04]
Length = 862
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P+H+ ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEPIILALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|389680676|ref|ZP_10172026.1| type VI secretion ATPase ClpV2 [Pseudomonas chlororaphis O6]
gi|388555781|gb|EIM19024.1| type VI secretion ATPase ClpV2 [Pseudomonas chlororaphis O6]
Length = 884
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQPLLAKLNIERLKDFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P S + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEEPASGKPAAPGESLLQRFTHNLTQQAR-EGKLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE VV G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAVVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|187923803|ref|YP_001895445.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
gi|187714997|gb|ACD16221.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
Length = 865
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+HV + ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHVLSALVAQHDGSARSLLSRAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP T G+ Q I L +A + + Q L I
Sbjct: 63 ALGDAITRLPQVQGTD---GNVQ---IGRELTGLLNQA---------DKEAQKLNDTFIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES---N 187
E ++++ DD R+ R+ G S ++S + V++ SQ + +E+
Sbjct: 108 SEMFLLAVADDKGEAGRLARQHGLSRKSLESAI---VAVRGGSQVHSQDAESQREALKKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 165 TVDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L+ + L L +++ R E E+R++ + + + G+ IV
Sbjct: 218 GLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLSDIAKDEGQTIVF 276
>gi|374578233|ref|ZP_09651329.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM471]
gi|374426554|gb|EHR06087.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM471]
Length = 879
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + V+ A +LA R GH Q + LHV +L + GL A L + +A+
Sbjct: 7 TERSRGFVQSAQSLAVREGHQQFSTLHVLKGLLDDNEGL--AAGLIDRAGG-NSRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAV 128
ALN++P + GG Q P ++ AA K A ++ G S ++ LL +
Sbjct: 64 TEDALNKVPKVSG----GGAGQIYLAPELARTFDAAEK---AGEKAGDSFVTVERLLLGL 116
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E ++ + G + + + +E +T ++ + +
Sbjct: 117 ALE---------KTSEAGTILAKGGVTPQNLNAAIEALRKGRTADSATAENAYDALKKYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+ +I GDVPE+L+D K L L + S R E E+R++ +
Sbjct: 221 LALRIVNGDVPESLKDKKLLSLDLGSLIAGAKYRGEFEERLKAV 264
>gi|358457589|ref|ZP_09167806.1| ATP-dependent chaperone ClpB [Frankia sp. CN3]
gi|357079134|gb|EHI88576.1| ATP-dependent chaperone ClpB [Frankia sp. CN3]
Length = 881
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 153/365 (41%), Gaps = 45/365 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + + A++ A G V PLH+ +LA A + A+
Sbjct: 6 LTARSHEALSSAISRATGDGSPLVDPLHLLTALLAQQD---GVASALVAAAGASVDAVRQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A++RLP +T G P +S L+ A E Q L
Sbjct: 63 RAESAVSRLPHAT-----GASVSPPQLSRQLITVLDNA---------ERQAGRLGDEYTS 108
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQ--AVSLEICSQSTPVSSNKSKESNV 188
+E L+I++ ++ R + AG ++ ++ +E+ + + S+ P S ++ E
Sbjct: 109 VEHLVIALAEEGGEAGRTLVSAGATADTLRGAIEKVRGGARRVTSRD-PEGSYQALEKYS 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L L++ A A K LDP+ R+ ++ VI+ L + K N V++GE +V G
Sbjct: 168 LDLTERARAGK-------LDPVVGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVLNL 304
+ ++ GDVPE+LR + + L + S +++ E E+R+ + N +R G+ I+ +
Sbjct: 221 LALRVVDGDVPESLRGRRIVSLDLGSMVAGSKLRGEFEERLTAVLNEIREAEGQ-IITFI 279
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A ++E M+ G ++ + ++G T Y
Sbjct: 280 DELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLDEYRTRIEK 327
Query: 365 HPSLE 369
P+LE
Sbjct: 328 DPALE 332
>gi|417558810|ref|ZP_12209770.1| ATPase [Xylella fastidiosa EB92.1]
gi|338178645|gb|EGO81630.1| ATPase [Xylella fastidiosa EB92.1]
Length = 859
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSH-PLQCKALE 70
LT+ + + A +LA R H + P+HV + +L G R +Q+ + PL + L
Sbjct: 4 LTSRFQNALADAQSLAVGRDHTIIEPVHVFSVLLDQQGGSTRPLLVQAGVNVPLLRERLT 63
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKR----AQAHQRRGSIENQQQPLL 126
+ P + G + SN L F R AQ H + +
Sbjct: 64 EILE----------ALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQ---------FM 104
Query: 127 AVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
A E +++++DD + + +R AG ++++ +++ E ++ E
Sbjct: 105 AS----EWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRGGETVQTENAEEQRQALE 160
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 161 KYTIDLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 213
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE LR + L L + + R E E+R++ + N + GR I+
Sbjct: 214 VEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVIL 273
Query: 302 L 302
Sbjct: 274 F 274
>gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182682296|ref|YP_001830456.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|386083626|ref|YP_005999908.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|54035830|sp|Q87AX8.1|CLPB_XYLFT RecName: Full=Chaperone protein ClpB
gi|28057675|gb|AAO29523.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
gi|182632406|gb|ACB93182.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
gi|307578573|gb|ADN62542.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 861
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSH-PLQCKALE 70
LT+ + + A +LA R H + P+HV + +L G R +Q+ + PL + L
Sbjct: 6 LTSRFQNALADAQSLAVGRDHTIIEPVHVFSVLLDQQGGSTRPLLVQAGVNVPLLRERLT 65
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKR----AQAHQRRGSIENQQQPLL 126
+ P + G + SN L F R AQ H + +
Sbjct: 66 EILE----------ALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQ---------FM 106
Query: 127 AVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
A E +++++DD + + +R AG ++++ +++ E ++ E
Sbjct: 107 AS----EWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRGGETVQTENAEEQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 163 KYTIDLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE LR + L L + + R E E+R++ + N + GR I+
Sbjct: 216 VEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVIL 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|15894246|ref|NP_347595.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337736176|ref|YP_004635623.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384457685|ref|YP_005670105.1| ATPase with chaperone activity, two ATP-binding domains
[Clostridium acetobutylicum EA 2018]
gi|54035886|sp|Q97KG0.1|CLPB_CLOAB RecName: Full=Chaperone protein ClpB
gi|15023863|gb|AAK78935.1|AE007611_3 ATPase with chaperone activity, two ATP-binding domains
[Clostridium acetobutylicum ATCC 824]
gi|325508374|gb|ADZ20010.1| ATPase with chaperone activity, two ATP-binding domains
[Clostridium acetobutylicum EA 2018]
gi|336293591|gb|AEI34725.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 865
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E L L + LEK+V Q + V +A+ V++ R+G KD S K
Sbjct: 554 VSKLVEGERNKLMRLSDELEKRVVGQTEAVKSVADAVIRARAG-------LKDMS--KPI 604
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSR 713
F G K ++AK LAR++F S +N + I +S +S +R +
Sbjct: 605 GSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPG------ 658
Query: 714 DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y E + EAV P+ V L +++E+A F + + GR+ + G+ +
Sbjct: 659 ---YVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDF 715
Query: 772 GDAIVILSC 780
++I+I++
Sbjct: 716 KNSIIIMTS 724
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 24/295 (8%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + T+A R H Q+ +H+ +++ GL+ + + + ++
Sbjct: 6 LTLKVQQAINDCQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGA---DVETVKR 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+R+P +LG Q NA + A +R + RG ++ L + +E
Sbjct: 63 DTEAELDRMP-----KVLGEGAQ-----NASIYATRRFEEVFVRGEKISRDFKDLYISVE 112
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L + +D ++ ++ + S + + + + S P E L
Sbjct: 113 HVMLALMDIDSGAIKSILDKNNISKKEFLKALREVRGNQRVDTSDP-------EGTYDAL 165
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ + LDP+ R+E++ VI L + K N V++GE +V G+ +
Sbjct: 166 NKYGRDLVKDAKKHKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAE 225
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ L + S R E E+R++ + V G+ I+
Sbjct: 226 RIVRGDVPEGLKNKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILF 280
>gi|399009627|ref|ZP_10712051.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM17]
gi|398111263|gb|EJM01152.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM17]
Length = 884
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQPLLAKLNIERLKDFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P S + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEEPASGKPAAPGESLLQRFTHNLTQQAR-EGKLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE VV G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAVVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|220914215|ref|YP_002489524.1| ATP-dependent chaperone ClpB [Arthrobacter chlorophenolicus A6]
gi|219861093|gb|ACL41435.1| ATP-dependent chaperone ClpB [Arthrobacter chlorophenolicus A6]
Length = 880
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 31/268 (11%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ QV P H+ ++ G+ + + P A+ + + A+ LPA++ G
Sbjct: 24 GNPQVEPAHLLKALMDQRDGVAVALLKATGADP---DAVSVQASSAIKALPATS-----G 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMR 150
G Q +S + A + A+ EN ++ ++ L L +V R++R
Sbjct: 76 GSTQQAQLSRPALQAIQNAKTEA-----ENLGDTFVSTEVLLLGLAAG---SDAVGRILR 127
Query: 151 EAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI 210
+AG S + + + + P ++ +S E L+ A + K LDP+
Sbjct: 128 DAGASHEALAAALPGVRGDRKVTSQDPENTFQSLEKFGTDLTAMARSGK-------LDPV 180
Query: 211 --RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPL 268
R+ ++ +++ L + K N V++GE VV G+ +I GDVPE+LR + L
Sbjct: 181 IGRDTEIRRIVQVLSRRTKNNPVIIGEPGVGKTAVVEGLAQRIVAGDVPESLRGKTLIAL 240
Query: 269 SISSF--RHMNRVEVEQR----VEEIKN 290
++S R E E+R +EEIKN
Sbjct: 241 DLASMVAGAKYRGEFEERLKAVLEEIKN 268
>gi|120602336|ref|YP_966736.1| ATP-dependent Clp protease ATPase ClpB [Desulfovibrio vulgaris DP4]
gi|120562565|gb|ABM28309.1| ATPase AAA-2 domain protein [Desulfovibrio vulgaris DP4]
Length = 865
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + +A +A R GH +V H+A+ ++ GL+ + P +A
Sbjct: 6 FTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKP---EAFAE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L + PA + G +S L A +AQ R+ E +
Sbjct: 63 ALERELGKRPAVSGPGAAPGQI---FVSKRLNAVLVKAQDFARQLKDEY---------VS 110
Query: 132 LEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E + +L++P+ + R+ RE S +V +E + + + P + ++ +
Sbjct: 111 VEHIFCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQRVTSANPEDTYEALQKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A K LDP+ R+ ++ VI L + K N V++GE +V G
Sbjct: 171 RDLVEEARKGK-------LDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I KGDVPE L++ L + + R E E+R++ + V GR I+
Sbjct: 224 LAHRILKGDVPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMF 281
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L L + L ++V Q++ V ++ VL+ R+G R G F
Sbjct: 553 VTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRARAGLSDPSRPIGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + N V + +S + A +
Sbjct: 607 ------IFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVA-----RLIGAP 655
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ S G V
Sbjct: 656 PGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFR 715
Query: 773 DAIVILS 779
+ I+I++
Sbjct: 716 NTIIIMT 722
>gi|315654259|ref|ZP_07907167.1| chaperone protein ClpB [Mobiluncus curtisii ATCC 51333]
gi|315491294|gb|EFU80911.1| chaperone protein ClpB [Mobiluncus curtisii ATCC 51333]
Length = 918
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 36/293 (12%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
+ Q T ++ + A+ A G+A + P+H+ + +L G+ + S
Sbjct: 4 MDQKFTTKSQEALATALRTAGAAGNAMLEPIHLLSALLEDREGI----AFEVLSSVADAD 59
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLL 126
A+ L LP +T G P S A++ A A Q RG
Sbjct: 60 AIGREVRRELASLPGAT-----GESVAEPQPSQAMLNVISAAGAKAQERGDD-------- 106
Query: 127 AVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L++ + ++ V +++R+AG S +++ +++ + P ++ K+ E
Sbjct: 107 --YVSTEHLLLGLAENEGKVGKILRDAGASDKKLRQAIQKIRGDAKVTSPNPEATFKALE 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+Q A K LDP+ R+ ++ VI+ L + K N V++GE V
Sbjct: 165 KYGDDLTQRAMDGK-------LDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAV 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQR----VEEIKN 290
V G+ +I GDVP++L+ + L +++ R + E+R +EEIKN
Sbjct: 218 VEGLAQRIVAGDVPDSLKHKHLIALDLAAMVAGAQYRGQFEERLKAVLEEIKN 270
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K SE L + L +++ QKD V ++N V + R+G R G F
Sbjct: 585 VGKLLRGESEKLLHMEEYLGRRLIGQKDAVRAVSNAVRRARAGVSDPNRPTGSF------ 638
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F I +S + + +
Sbjct: 639 ------LFLGPTGVGKTELAKALADFLFDDEKALTRIDMSEYGEKHSVA-----RLIGAP 687
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G V
Sbjct: 688 PGYVGYEEGGQLTEAVRRRPYGVVLLDEVEKAHPDVYDILLQVLDDGRLTDGQGRTVDFR 747
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 748 NVILVLTS 755
>gi|146343231|ref|YP_001208279.1| chaperone [Bradyrhizobium sp. ORS 278]
gi|146196037|emb|CAL80064.1| Chaperone [Bradyrhizobium sp. ORS 278]
Length = 879
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 30/291 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L S GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL ++P + + G Q +S L AF A+ + + +
Sbjct: 64 TEDALGKMPKVSGS----GAGQI-YLSPELARAFDAAEKAAEKAGDSF---------VTV 109
Query: 133 EQLIISI-LDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+L++ + LD S ++ + G ++ + + +E +T ++ + +
Sbjct: 110 ERLLLGLTLDAKSETGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D + L L + + R E E+R++ + V + G
Sbjct: 223 LRIVNGDVPESLKDKRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEG 273
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|71276549|ref|ZP_00652823.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|170730931|ref|YP_001776364.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
gi|71162620|gb|EAO12348.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Dixon]
gi|71729142|gb|EAO31265.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
Ann-1]
gi|167965724|gb|ACA12734.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
Length = 861
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSH-PLQCKALE 70
LT+ + + A +LA R H + P+HV + +L G R +Q+ + PL + L
Sbjct: 6 LTSRFQNALADAQSLAVGRDHTIIEPVHVFSALLDQQGGSTRPLLVQAGVNVPLLRERLT 65
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKR----AQAHQRRGSIENQQQPLL 126
+ P + G + SN L F R AQ H + +
Sbjct: 66 EILE----------ALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQ---------FM 106
Query: 127 AVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
A E +++++DD + + +R AG ++++ +++ E ++ E
Sbjct: 107 AS----EWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRGGETVQTENAEEQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 163 KYTIDLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I G+VPE LR + L L + + R E E+R++ + N + GR I+
Sbjct: 216 VEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVIL 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|431931585|ref|YP_007244631.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
gi|431829888|gb|AGA91001.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
Length = 864
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 30/286 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + +A +LA R H + P H+ +L G R Q+ ++ L
Sbjct: 6 LTSKFQLALAEAQSLAVGRDHQFIEPAHLMVALLDQEGGTARHLLAQAD---VKVDQLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL+RLP+ GG N L+ + A QR+ I
Sbjct: 63 RLGEALDRLPSVEGA---GGDLHVSNDLNRLLNQTDKL-AQQRKDQY-----------IS 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ LDD + MR+AG S ++ +E + + ++ + +
Sbjct: 108 SELFVLAALDDKGELGEAMRQAGASKGAIEQAIENMRGGQSVGDPNAEDTRQALQKFSID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLV 292
+I G+VPE L+ + L L +++ R E E+R++ + N V
Sbjct: 221 QRIVNGEVPEGLKSKRLLALDMAALIAGAKYRGEFEERLKAVLNDV 266
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E + L + ALE +V Q + + +++ + + R+G R G F
Sbjct: 548 VSRMLEGERDKLLRMEAALEHRVVGQDEALRAVSDAIRRSRAGLADPARPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V + +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAEFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EA+ P+ + L+++VE+A + ++ GR+ G V +A
Sbjct: 656 YEEGGYL---TEAIRRRPYSLILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNA 712
Query: 775 IVILSC 780
+V+++
Sbjct: 713 VVVMTS 718
>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
borkumensis SK2]
Length = 865
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 133/300 (44%), Gaps = 29/300 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + A +LA +G++ + P+H+ ++ G R ++ ++ +
Sbjct: 6 LTARLQEALSDAQSLAVGQGNSTIEPVHLMLALMQQQGGAARPLLEKAGAN---VADVIT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N+A+++LP T+ G Q + ++ R +A QR + + LLA
Sbjct: 63 ALNMAVDKLPTVTN---FNGDVQMGQATGRMLNIADR-EAQQRGDQYLSTEVVLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ D + ++ + AG + + + + E + ++ + + L
Sbjct: 115 ------ACDDSGELGKLFKNAGVTRKVLAEKIAEVRGGETVNDPNAEDKREALDKYTVNL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 169 TERAESGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I G+VPE L+D + L L +++ R E E+R++ + N + GR I+L + +L
Sbjct: 222 RIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELAKQEGR-IILFIDEL 280
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 18/216 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + +AL +V Q + V +AN V + R+G R G F
Sbjct: 551 VSKMLEGEKDKLLRMEDALHDRVVGQNEAVEAVANAVRRSRAGLSDPNRPNGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 605 ------LFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVG 658
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ E V P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 659 YEEGGYL---TELVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 715
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAME 810
+V+++ S + + + + E K A ME
Sbjct: 716 VVVMTSNLGSDLIQKLAGSDAESASDYETMKSAVME 751
>gi|29833783|ref|NP_828417.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|54035822|sp|Q826F2.1|CLPB2_STRAW RecName: Full=Chaperone protein ClpB 2
gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 879
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 34/305 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A T A R GH +V H+ +L GL+ Q+ + P + +A
Sbjct: 6 LTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLQQAGTEPKELRA--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L+ P +T G F T ++ L AA E + + L
Sbjct: 63 AVREELSHRPKATGPGAAPGQV-FVTQRLARLLDAA-------------EREAKRLKDEY 108
Query: 130 IELEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ +E L++++ ++ S ++++AG + S + Q + + + P + ++ E
Sbjct: 109 VSVEHLLLALAEESSSTAAGLLLKQAGITRDSFLSALTQVRGNQRVTSANPEVAYEALEK 168
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A + + LDP+ R+ ++ V + L K K N V++G+ +V
Sbjct: 169 YGRDLVLEARSGR-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR I+L
Sbjct: 222 EGLAQRIVRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGR-ILL 280
Query: 303 NLGDL 307
+ +L
Sbjct: 281 FVDEL 285
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V + + +++ RSG R G F
Sbjct: 556 VARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LAR +F S N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQE---------RHTVSRL 654
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ Y E + EAV P+ V L +++E+A + ++ GRI + G
Sbjct: 655 MGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|387153291|ref|YP_005702227.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
gi|54035770|sp|Q72AW6.1|CLPB_DESVH RecName: Full=Chaperone protein ClpB
gi|46449700|gb|AAS96350.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233735|gb|ADP86589.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
Length = 865
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 29/298 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ + +A +A R GH +V H+A+ ++ GL+ + P +A
Sbjct: 6 FTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKP---EAFAE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L + PA + G +S L A +AQ R+ E +
Sbjct: 63 ALERELGKRPAVSGPGAAPGQI---FVSKRLNAVLVKAQDFARQLKDEY---------VS 110
Query: 132 LEQLIISILDDPS---VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E + +L++P+ + R+ RE S +V +E + + + P + ++ +
Sbjct: 111 VEHIFCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQRVTSANPEDTYEALQKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A K LDP+ R+ ++ VI L + K N V++GE +V G
Sbjct: 171 RDLVEEARKGK-------LDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I KGDVPE L++ L + + R E E+R++ + V GR I+
Sbjct: 224 LAHRILKGDVPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMF 281
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L L + L ++V Q++ V ++ VL+ R+G R G F
Sbjct: 553 VTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRARAGLSDPSRPIGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + N V + +S + A +
Sbjct: 607 ------IFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVA-----RLIGAP 655
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + ++ GR+ S G V
Sbjct: 656 PGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFR 715
Query: 773 DAIVILS 779
+ I+I++
Sbjct: 716 NTIIIMT 722
>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
Length = 857
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 128/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ ++ A ++A R HA + P H+ ML G +R + + AL +
Sbjct: 6 LTSKFQLALQDAQSMALGRDHAYIEPAHLLVAMLNQEGGTIRPLLTTAR---VDGNALRV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
+ +L+RLP + M Q P + L K AQ QR+ + + + LLA
Sbjct: 63 ELDKSLDRLPRVSGGDM---DVQVSPVLGRLLNQCDKLAQ--QRKDAYISSELFLLA--- 114
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
S+ D + +++ G S ++ ++ + + ++ E +
Sbjct: 115 -------SLDDKGELGELLKRVGLSKDKLTKAIDDIRGGQKVDDPNAEENRQALEKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE + G+
Sbjct: 168 LTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 221 QRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERLKALLNELAKEEGRVILF 276
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + ++L ++V Q + V +AN + + R+G R G F
Sbjct: 548 VAKMLEGEKEKLLRMEDSLHEQVIGQNEAVDAVANAIRRSRAGLSDPNRPVGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFMGPTGVGKTELCKALADFLFDSRDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|386845162|ref|YP_006263175.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Actinoplanes
sp. SE50/110]
gi|359832666|gb|AEV81107.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Actinoplanes
sp. SE50/110]
Length = 861
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 38/297 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--AASTG--LLRTACLQSHSHPLQCK 67
LT ++ V+K A+ A + GHA V P H+ ++L A ST LLR ++P +
Sbjct: 6 LTTKSRDVIKSAVATAAQSGHATVEPWHMLLSLLDTAGSTAPALLRAVG----ANPADVR 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A+ +LP++ G P++S V A G E QPL
Sbjct: 62 R---AAARAVEQLPSAR-----GASTAEPSLSREFVNAI---------GEAELIAQPLGD 104
Query: 128 VKIELEQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLE-ICSQSTPVSSNKSKE 185
+ E L+ + +VS+ ++ AG + + + Q + + + P + K+ E
Sbjct: 105 EYVSTEHLLAGLARGGGAVSQTLKAAGAAEDALVAAFPQVRGGDRKVTNADPEQTYKALE 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A K+ DP+ R+ ++ V++ L + K N V++GE +
Sbjct: 165 KYSVDLTALAREGKI-------DPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAI 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
V G+ +I GDVPE LRD K + L + + R + E+R++ + +R G+
Sbjct: 218 VEGLAQRIVAGDVPETLRDKKLVSLDLGAMVAGAQYRGQFEERLKSVLEEIRGSNGQ 274
>gi|365888187|ref|ZP_09426975.1| Chaperone [Bradyrhizobium sp. STM 3809]
gi|365336144|emb|CCD99506.1| Chaperone [Bradyrhizobium sp. STM 3809]
Length = 879
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 30/291 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L S GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL ++P + + G Q +S L AF A+ + + +
Sbjct: 64 TEDALGKMPKVSGS----GAGQI-YLSPELARAFDAAEKAAEKAGDSF---------VTV 109
Query: 133 EQLIISI-LDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+L++ + LD S ++ + G ++ + + +E +T ++ + +
Sbjct: 110 ERLLLGLTLDAKSETGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D + L L + + R E E+R++ + V + G
Sbjct: 223 LRIVNGDVPESLKDKRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEG 273
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|312796157|ref|YP_004029079.1| ClpB protein [Burkholderia rhizoxinica HKI 454]
gi|312167932|emb|CBW74935.1| ClpB protein [Burkholderia rhizoxinica HKI 454]
Length = 523
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 36/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + PLHV +LA G R+ ++ H +AL+
Sbjct: 10 LTTKFQEALADAQSLAVGRDNQYIEPLHVLAALLAQPDGAARSLLSRAGVH---MQALQA 66
Query: 72 CFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
AL RLP T G+ Q +S L A K AQ + I
Sbjct: 67 ALGAALERLPQVQGTD---GNVQVSRELSGLLNQADKEAQKYS-------------DAYI 110
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAV--SLEICSQSTPVSSNKSKESN 187
E ++++ DD R+ RE G + +++ V AV + ++ SQ S ++ +
Sbjct: 111 ASEMFLLALADDKGDAGRLAREHGLTRKALEAAV-AAVRGNAQVNSQDAE-SQREALKKY 168
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A+K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 169 TVDLTERARASK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVE 221
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L+D + L L +++ R E E+R++ + + + GR IV
Sbjct: 222 GLAQRIVNGEVPETLKDKRVLSLDMAALLAGAKYRGEFEERLKAVLSDIAKDEGRTIVF 280
>gi|332141863|ref|YP_004427601.1| ClpB protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327551885|gb|AEA98603.1| ClpB protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 640
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 30/288 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ ML G +R Q++ + AL + A+ R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQAN---INVNALRSALSQAIER 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP +GG Q S L+ + A QR+ I E +++
Sbjct: 71 LPRIEG---IGGDVQLSKDSGILLNLCDKI-AQQRKDEY-----------ITSEIFVLAA 115
Query: 140 LDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
L+D + +++ + ++S ++ + + ++ E L++ A
Sbjct: 116 LEDKGRLGEILKSLNITKDAIESAIDDMRGGQKVTDPNAEDVRQALEKYTTDLTERAEQG 175
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
K LDP+ R++++ ++ L + K N V++GE +V G+ +I G+V
Sbjct: 176 K-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
PE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 229 PEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILF 276
>gi|415722734|ref|ZP_11469127.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703C2mash]
gi|388064206|gb|EIK86763.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703C2mash]
Length = 864
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEHGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E +++ ++ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLVGMVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 26/190 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR--S 712
F G K ++AK LA +F V I +S + E S R
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEY-------MEKSSVSRLIG 654
Query: 713 RDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVS 770
Y E + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVD 714
Query: 771 LGDAIVILSC 780
+ I+I++
Sbjct: 715 FTNTILIMTS 724
>gi|347526626|ref|YP_004833373.1| chaperone protein ClpB [Sphingobium sp. SYK-6]
gi|345135307|dbj|BAK64916.1| chaperone protein ClpB [Sphingobium sp. SYK-6]
Length = 859
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T A ++ A T+A R H Q+ P H+ +L ++GL+R A + +
Sbjct: 6 FTDRAKGFLQSAQTVAIRMNHQQIAPDHLLKALLEDEQGMASGLIRAAGGDAQ------R 59
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLL 126
AL ++AL+++PA + GG Q P ++N V +A Q Q+ G
Sbjct: 60 ALSET-DLALSKIPAVSG----GGAQQAPGLNNDSVRVLDQAEQVAQKAGDS-------- 106
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
V +E L +++ + S + ++ AG VK++ A E+ T + S E
Sbjct: 107 YVTVERLLLALALSLNTSAGKALQAAG-----VKADALNAAINELRKGKT--ADTASAED 159
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 160 RYDALKKFARDLTEAAREGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIA 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
G+ +I GDVP+ L+ + L + S R E E+R++ + + V++ G
Sbjct: 220 EGLALRIANGDVPDTLKGRTLMALDMGSLIAGAKYRGEFEERLKGVLDEVKAGEG 274
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L ++ L K+V Q D V ++ V + R+G R G F
Sbjct: 549 VDRMMEGEREKLLAMEAELGKRVIGQADAVKAVSTAVRRSRAGLQDPNRPLGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F N V I +S F S R
Sbjct: 603 ------LFLGPTGVGKTELTKALAGFLFDDDNAMVRIDMSEFMEKHSVARLIGAPPG--- 653
Query: 711 RSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E EAV P++V L ++VE+A + ++ GR+ G
Sbjct: 654 ------YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHADVFNVLLQVLDDGRLTDGQGRT 707
Query: 769 VSLGDAIVILSC 780
V + I++L+
Sbjct: 708 VDFTNTIIVLTS 719
>gi|310789469|gb|EFQ25002.1| ATPase [Glomerella graminicola M1.001]
Length = 922
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGL--------------LRTACL 57
T V+ AM LA + H+Q+ P+H+A ++L L R
Sbjct: 7 FTDRGEKAVQDAMALAEQYAHSQLLPVHLAVSLLEPPADLSKDQQNGPQQAPSMFRQVIE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++H P +A + L RLP+ P +++ A ++AQ Q+
Sbjct: 67 RAHGDP---QAFDRALKKTLVRLPSQDPPP------DQVSVAPTFHAVLRKAQELQK--- 114
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
Q+ +A+ + LI ++ +D ++ ++EA ++ V AV+ ++
Sbjct: 115 --TQKDSFIAI----DHLIQALAEDHTIQTCLKEANIPKAKL---VHDAVAQIRGTKRVD 165
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGE 235
+ ++E + + T T +++ + ++DP+ R E++ V+ L + K N V++GE
Sbjct: 166 SKNADTEEEHENLAKFTIDMTALARDK-NMDPVIGREEEIRRVVRILSRRTKNNPVLIGE 224
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
VV G+ +I DVP+ L+ K L L + +
Sbjct: 225 PGVGKTTVVEGLAQRIVNRDVPDNLKACKLLSLDVGAL 262
>gi|374984658|ref|YP_004960153.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
gi|297155310|gb|ADI05022.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
Length = 874
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 42/365 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ ++ A T A R G +V H+ +L GL+ Q + P AL
Sbjct: 6 LTQKSQEALQGAQTKALRLGQTEVDGEHLLLALLDQPEGLVPRLIDQVGADP---TALRT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ R P T G ++ L A+ +R E +
Sbjct: 63 MLEAEVARKPKVTGPGAAPGQV---FVTQRLAKLLDTAEQEAKRLKDEY---------VS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ D+ S + RV++E G + S + Q + + + P + ++ E
Sbjct: 111 VEHLMLALTDEGSATAAGRVLKEHGVTKEAFLSALTQVRGGQRVTSANPEVAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A + K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVLEARSGK-------LDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR I+L +
Sbjct: 224 LAQRIVRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAASGR-ILLFV 282
Query: 305 GDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSG 364
+L A ++E M+ G ++ + ++G T Q Y +
Sbjct: 283 DELHTV-VGAGAAEGA-----------MDAGNMLKPMLARGELHMIGATTLQEYRKHIEK 330
Query: 365 HPSLE 369
+LE
Sbjct: 331 DAALE 335
>gi|254427099|ref|ZP_05040806.1| ATPase, AAA family [Alcanivorax sp. DG881]
gi|196193268|gb|EDX88227.1| ATPase, AAA family [Alcanivorax sp. DG881]
Length = 863
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 29/300 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + A +LA +G++ + P+H+ ++ G R ++ ++
Sbjct: 4 LTARLQEALSDAQSLAVGQGNSSIEPVHLMLALMQQQGGAARPLLEKAGANSADVIT--- 60
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N+A+++LP + G Q + L+ R +A QR + + LLA
Sbjct: 61 ALNMAVDKLPTVNN---FNGDVQMGQATGRLLNLADR-EAQQRGDQYLSTEVVLLA---- 112
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ D+ + ++ + AG + + + + E + ++ + + L
Sbjct: 113 ------ACDDNGELGKLFKNAGVTRKVLAEKIAEVRGGEAVNDPNAEDKREALDKYTVNL 166
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 TERAESGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 219
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I G+VPE L+D + L L +++ R E E+R++ + N + GR I+L + +L
Sbjct: 220 RIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELGKQEGR-IILFIDEL 278
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 109/294 (37%), Gaps = 26/294 (8%)
Query: 526 HKTHRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPN 585
+K + A VE +Q+ R S + + P L + + +D ++ + N
Sbjct: 473 YKAELEQARVEMEQARRAGDL--SRMSELQYGQIPELEKKVQDAQDREEQAQAETQLLRN 530
Query: 586 STSSSDIMEMEY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRS 639
+ +I E+ V K E + L + AL +V Q + V +AN V + R+
Sbjct: 531 KVTDEEIAEVVAKWTGIPVSKMLEGEKDKLLRMEEALHDRVVGQDEAVEAVANAVRRSRA 590
Query: 640 GTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF 696
G R G F F G K ++ K LA +F + V I +S F
Sbjct: 591 GLSDPNRPNGSF------------LFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEF 638
Query: 697 SSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAI 756
+ + + Y+ E V P+ V L+++VE+A + +
Sbjct: 639 MEKHSVARLVGAPPGYVGYEEGGYL---TELVRRKPYSVVLLDEVEKAHPDVFNILLQVL 695
Query: 757 ESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAME 810
+ GR+ G V + +V+++ S + + Q E K A ME
Sbjct: 696 DDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGADAQSGSDYEAMKSAVME 749
>gi|452002269|gb|EMD94727.1| hypothetical protein COCHEDRAFT_1167835 [Cochliobolus
heterostrophus C5]
Length = 920
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVA-----------NTMLAASTGLLRTACLQSHS 61
T AA + + LA+ H+Q+TPLH+A NT+ L + +++
Sbjct: 8 TDRAAKALADSFDLAKGYAHSQLTPLHLAVSLIDPPKDLANTVDVPPPPLFKQVLERANG 67
Query: 62 HPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQ 121
P +A E A+ RLP+ P P ++ L AA + ++ Q
Sbjct: 68 DP---QAFERNLKKAMVRLPSQDPPPERTSPS--PAMAKVLRAAEELSK---------TQ 113
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSN 181
+ +AV + LI+S+ D + R++ E+ +T+ N QA+ ++ +
Sbjct: 114 KDSFIAV----DHLIMSLCQDSQIQRILAESNVPNTKQIDNAIQALR---GTKRVDSKTA 166
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
++E N + T T +++ +DP+ R ++ VI L + K N V++GE
Sbjct: 167 DAEEENENLKKFTIDMTAMAR-EGKIDPVIGREDETRRVIRILTRRTKNNPVLIGEPGVG 225
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
VV G+ +I DVP L K L L + +
Sbjct: 226 KTTVVEGLARRIVDADVPANLAACKLLSLDVGAL 259
>gi|298253232|ref|ZP_06977024.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
5-1]
gi|297532627|gb|EFH71513.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
5-1]
Length = 864
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQTGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A E + +
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQA---------EKEMYAMGD 103
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I I+ +V+ + ++ S+ ++ V V+S + E
Sbjct: 104 EYVSTEHMLIGIVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPMTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|297804824|ref|XP_002870296.1| hypothetical protein ARALYDRAFT_493439 [Arabidopsis lyrata subsp.
lyrata]
gi|297316132|gb|EFH46555.1| hypothetical protein ARALYDRAFT_493439 [Arabidopsis lyrata subsp.
lyrata]
Length = 540
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 23/185 (12%)
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ +E L+IS+LDD + +++EAG +VKS VE+ + E+ Q+ K +
Sbjct: 7 VGVEALVISLLDDSQIRDLLKEAGSVPEKVKSEVEK-LGGEVNLQAL-------KTYGID 58
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
++ Q LDP+ R++++ V+ L + K N V++GE VV G+
Sbjct: 59 LVEQVGK----------LDPVIGRDKEIRRVVGILSRRTKNNPVLIGEPGVGKTAVVEGL 108
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
+I KGDVP L DVK L + + R + E+R++ + V + G+ +VL +
Sbjct: 109 AQRILKGDVPINLTDVKLFSLDLGAMVAGTTLRGQFEERLKSVLKEVENAQGK-VVLFID 167
Query: 306 DLEWA 310
++ A
Sbjct: 168 EIHMA 172
>gi|448747291|ref|ZP_21728952.1| Chaperonin ClpB [Halomonas titanicae BH1]
gi|445565203|gb|ELY21315.1| Chaperonin ClpB [Halomonas titanicae BH1]
Length = 885
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 28/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
TA+ S + +A +LA RGH Q+ P H+ +L ++ ++ +P + +
Sbjct: 26 FTAKLQSAIAEAQSLAVGRGHNQLDPAHLLLALLDTKDTGIKALIEKAEGNPSRLRD--- 82
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
L+ LP G Q P S + F + Q+RG + +L +
Sbjct: 83 GLVQQLDNLP---KVGQFDGEVQ-P--SRDFIKLFNLTDREAQKRGDQFIASELVLLAAL 136
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+ I +L D ++R EA +S + + V+ A ++ + NK +
Sbjct: 137 EMNSAITKLLKDAGINRKSLEAAINSLRGGATVDDA-----NAEDQREALNKY----TMD 187
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 188 LTQRALDGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 240
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE L++ + L L + S
Sbjct: 241 QRIVNGEVPEGLKEKRVLSLDMGSL 265
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL ++V Q + V +AN V + R+G R G F
Sbjct: 570 VSKMLEGERDKLLRMEEALHQRVIGQDEAVEAVANAVRRSRAGLSDPNRPNGSF------ 623
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 624 ------LFLGPTGVGKTELCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 677
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 678 YEEGGYL---TEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT 734
Query: 775 IVILSC 780
+++++
Sbjct: 735 VIVMTS 740
>gi|398876658|ref|ZP_10631812.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM67]
gi|398204151|gb|EJM90960.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM67]
Length = 880
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|400533046|ref|ZP_10796585.1| chaperone ClpB [Mycobacterium colombiense CECT 3035]
gi|400333390|gb|EJO90884.1| chaperone ClpB [Mycobacterium colombiense CECT 3035]
Length = 848
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 149/795 (18%), Positives = 282/795 (35%), Gaps = 144/795 (18%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ ++ P H+ +L + G+ P +A L RLP +
Sbjct: 25 GNPEIRPAHLLMALLTQADGIAAPLLEAVGVDPAVIRA---ETERVLERLP------QIS 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSRVM 149
G P +S +AA AQ Q + ++ + E L++ + D V++++
Sbjct: 76 GASSQPQLSRESLAAVTTAQ--QLATEMNDEY-------VSTEHLLVGLATGDSDVAKLL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
G S ++ + + P ++ ++ E L++ A K LDP
Sbjct: 127 TGHGASPQALRDGFVKVRGSGRVTSPEPEATYQALEKYSTDLTERAREGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD +
Sbjct: 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIS 239
Query: 268 LSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L + S R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 240 LDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSLETL 371
M+ G ++ + L+G T Y + G PS+E
Sbjct: 294 ------MDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDT 347
Query: 372 WSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLFEGE 416
+ H + I +L + +D + ++ KA + S L E +
Sbjct: 348 VGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEID 407
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSG 476
++ + E E +L + D + L+ ++K LS
Sbjct: 408 SRPVEIDEVERLVRRLEIEEMAL---AKEEDEASKERLEKLRSELADQKEKLS------- 457
Query: 477 VRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHRDWA 533
+L +W + N+I E+ T S + G + + +Y + +
Sbjct: 458 --ELTTRWQNEKNAIDVVRELKEQLDTLRGESERAERDGDLAKAAELRYGRIPEVEKKLE 515
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIM 593
P+ RE+ L D S IP + L+ ++ ++
Sbjct: 516 AALPQAEARENVMLKEEVGPDDIAEVVSAWTGIPAGRMLE-------------GETAKLL 562
Query: 594 EMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKD 650
ME + L K+V QK V +++ V + R+G R G F
Sbjct: 563 RME-----------------DELGKRVIGQKRAVTAVSDAVRRSRAGVADPNRPTGSF-- 603
Query: 651 HSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNK 710
F G K ++AK LA +F V I +S + + +
Sbjct: 604 ----------MFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVG--- 650
Query: 711 RSRDEQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSS 765
YI + EAV P+ V L +++E+A + ++ GR+
Sbjct: 651 -----APPGYIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQ 705
Query: 766 GDEVSLGDAIVILSC 780
G V + I+IL+
Sbjct: 706 GRTVDFRNTILILTS 720
>gi|258563126|ref|XP_002582308.1| heat shock protein HSP98 [Uncinocarpus reesii 1704]
gi|237907815|gb|EEP82216.1| heat shock protein HSP98 [Uncinocarpus reesii 1704]
Length = 927
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 44/283 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML------------------AASTGLLR 53
T A + QA LA + H ++ P+H+A +L +A+ L +
Sbjct: 6 FTDRANHALMQAGELAEQFAHPEIVPIHLAVALLNPTSEDAEGQQPVHDSHKSANIPLFK 65
Query: 54 TACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQ 113
++H P Q LE +L RLP+ P Q IS AL + A+
Sbjct: 66 QVIERAHGDPQQ---LERALQKSLVRLPSQDPPP-----SQM-AISPALAKVLRAAKELS 116
Query: 114 RRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEIC 172
+ Q+ +A+ + LI ++ DPSV R + ++ + + + S V+Q +
Sbjct: 117 K-----TQKDSYVAI----DHLITALAQDPSVKRCLADSNIPNVKMIDSAVQQIRGTKRV 167
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
T + +++ + TA A + +DP+ R E++ VI L + K N
Sbjct: 168 DSKTADAEEETENLKRFTIDMTAMAREGK-----IDPVIGREEEIRRVIRILSRRTKNNP 222
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
V++GE +V G+ +I DVP L K L L + +
Sbjct: 223 VLIGEPGVGKTTIVEGLARRIVNADVPANLAQCKLLSLDVGAL 265
>gi|222087300|ref|YP_002545837.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
gi|221724748|gb|ACM27904.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 866
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +G+ Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 LQSAQTNALSQGNQQFTPEHVLKVLLDDDQGMAASLIERAGGD---AKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + GG Q +S L F A+ ++ + V+ L+ L I
Sbjct: 71 LPKVS-----GGDGQV-YLSQPLAKVFTTAEEASKKAG-----DSFVTVERLLQALAIE- 118
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
S S +++AG + + + Q ++ +I T S+N E L + A
Sbjct: 119 -SSASTSATLKKAGVTP----AGLNQVIN-DIRKGRTADSANA--EQGFDSLKKYARDLT 170
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 171 AEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVP 230
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E+L+D K + L + + R E E+R++ + N V+S G I+
Sbjct: 231 ESLKDKKLMALDMGALIAGAKFRGEFEERLKAVLNEVQSENGEIILF 277
>gi|398378028|ref|ZP_10536196.1| ATP-dependent chaperone ClpB [Rhizobium sp. AP16]
gi|397725799|gb|EJK86246.1| ATP-dependent chaperone ClpB [Rhizobium sp. AP16]
Length = 866
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +G+ Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 LQSAQTNALSQGNQQFTPEHVLKVLLDDDQGMAASLIERAGGD---AKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + GG Q +S L F A+ ++ + V+ L+ L I
Sbjct: 71 LPKVS-----GGDGQV-YLSQPLAKVFTTAEEASKKAG-----DSFVTVERLLQALAIE- 118
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
S S +++AG + + + Q ++ +I T S+N E L + A
Sbjct: 119 -SSASTSATLKKAGVTP----AGLNQVIN-DIRKGRTADSANA--EQGFDSLKKYARDLT 170
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 171 AEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVP 230
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E+L+D K + L + + R E E+R++ + N V+S G I+
Sbjct: 231 ESLKDKKLMALDMGALIAGAKFRGEFEERLKAVLNEVQSENGEIILF 277
>gi|419394069|ref|ZP_13934865.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC15A]
gi|419409409|ref|ZP_13950091.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC15D]
gi|419414963|ref|ZP_13955595.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC15E]
gi|378233726|gb|EHX93812.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC15A]
gi|378251378|gb|EHY11276.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC15D]
gi|378255996|gb|EHY15849.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC15E]
Length = 849
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
+ L LE++V Q+ + IA+ VL CR+ KD VK + G
Sbjct: 540 SGLLRCLEQRVLGQRYAMSAIASQVLICRA-------DLKD--PVKPDGVFLLAGPSGTG 590
Query: 670 KEKIAKELARLVFGSHNNFVSIALSSFSSTRADST-EDSRNKRSRDEQSCSYIERFAEAV 728
K + A+ LA V+G N ++I ++ F ST + + Q + ER V
Sbjct: 591 KTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTER----V 646
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
S+NP+ V L++++E+A + F + +SG I + G VS D ++I++
Sbjct: 647 SHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMT 697
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R ++V +I+ L+ +R+ N ++ GE +V G+ +I G VP+ L++V+
Sbjct: 187 LDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVR 246
Query: 265 CLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
L + + V E E R++ + + S G I+
Sbjct: 247 IHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILF 286
>gi|398860427|ref|ZP_10616075.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM79]
gi|398234704|gb|EJN20565.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM79]
Length = 882
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|380302160|ref|ZP_09851853.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 896
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 49/350 (14%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ QV LH+ ++ G+ R A + + P + AL R P G
Sbjct: 24 GNPQVGSLHLLAALVDQPDGIGRAALADAGADPAEVAR---RTEEALARQPRVQGEA--G 78
Query: 91 GHCQF--PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSR 147
GH F P +AL AA K A A R + E L++ I L + +R
Sbjct: 79 GHPTFVGPGF-DALEAARKAADAAGR-------------TYLSTEHLMLGIALGEDDAAR 124
Query: 148 VMREAGFSSTQVKSNVEQAVSLE--ICSQST--PVSSNKSKESNVLVLSQTASATKVSKP 203
++ EAG + ++ + + + E + + T P SS +S E + L+ A +
Sbjct: 125 ILAEAGATPEHLRDAITRLTAGEDTMTAPDTENPESSFQSLEKYGVDLTAQAREGR---- 180
Query: 204 RVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALR 261
LDP+ R+ ++ V++ L + K N V++GE VV G+ +I +GDVP++LR
Sbjct: 181 ---LDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVEGDVPDSLR 237
Query: 262 DVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQ 319
D + + L +SS + R E E+R++ + + +RS G+ I+ + +L + +
Sbjct: 238 DKRLISLDLSSMVAGSKYRGEFEERMKAVLDEIRSSNGQ-IITFIDELHTVVGAGGTGDG 296
Query: 320 VRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
M+ G ++ + ++G T Y P+LE
Sbjct: 297 A-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDPALE 335
>gi|388456237|ref|ZP_10138532.1| endopeptidase Clp ATP-binding subunit B [Fluoribacter dumoffii
Tex-KL]
Length = 858
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 40/289 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQIALADAQSLALGRDNGFIEPEHLMKALLDQQGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
L + AL++LP + +GG N L+ + + Q++ + + + +
Sbjct: 57 IPLLRTLLDQALDKLPKVSG---MGGDIHISNSLNRLLNVTDKL-SQQKKDNFISSELFI 112
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
LA +I ++ S+SR++++AG +++ +++ E + ++ E
Sbjct: 113 LA----------AITEEGSLSRILKQAGGDVKAIENAIQELRGGETINDPNAEEQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L L+ A K LDP+ R++++ ++ L + K N V++GE +
Sbjct: 163 KYTLDLTARAEQGK-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 216 VEGLAQRIINGEVPEGLKNKRLLSLDMGALIAGAKYRGEFEERLKAVLN 264
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L ++ Q + + ++N++ + R+G R G F
Sbjct: 548 VAKMMEGEKEKLLRMEEVLHNRLIGQNEAIDAVSNSIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHADVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
I++++
Sbjct: 713 IIVMTS 718
>gi|419143943|ref|ZP_13688675.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC6A]
gi|419148842|ref|ZP_13693498.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC6B]
gi|377991474|gb|EHV54624.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC6A]
gi|377992969|gb|EHV56108.1| type VI secretion ATPase, ClpV1 family [Escherichia coli DEC6B]
Length = 849
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
+ L LE++V Q+ + IA+ VL CR+ KD VK + G
Sbjct: 540 SGLLRCLEQRVLGQRYAMSAIASQVLICRA-------DLKD--PVKPDGVFLLAGPSGTG 590
Query: 670 KEKIAKELARLVFGSHNNFVSIALSSFSSTRADST-EDSRNKRSRDEQSCSYIERFAEAV 728
K + A+ LA V+G N ++I ++ F ST + + Q + ER V
Sbjct: 591 KTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTER----V 646
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
S+NP+ V L++++E+A + F + +SG I + G VS D ++I++
Sbjct: 647 SHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMT 697
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R ++V +I+ L+ +R+ N ++ GE +V G+ +I G VP+ L++V+
Sbjct: 187 LDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVR 246
Query: 265 CLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
L + + V E E R++ + + S G I+
Sbjct: 247 IHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILF 286
>gi|398884834|ref|ZP_10639760.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM60]
gi|398193556|gb|EJM80656.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM60]
Length = 880
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|407470879|ref|YP_006782678.1| hypothetical protein O3O_21210 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480465|ref|YP_006777614.1| hypothetical protein O3K_04435 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481025|ref|YP_006768571.1| hypothetical protein O3M_04480 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|417806533|ref|ZP_12453471.1| hypothetical protein HUSEC_16655 [Escherichia coli O104:H4 str.
LB226692]
gi|417834281|ref|ZP_12480727.1| hypothetical protein HUSEC41_16313 [Escherichia coli O104:H4 str.
01-09591]
gi|417865720|ref|ZP_12510763.1| hypothetical protein C22711_2651 [Escherichia coli O104:H4 str.
C227-11]
gi|422989111|ref|ZP_16979883.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. C227-11]
gi|422996007|ref|ZP_16986770.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. C236-11]
gi|423001145|ref|ZP_16991898.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 09-7901]
gi|423004815|ref|ZP_16995560.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 04-8351]
gi|423011321|ref|ZP_17002054.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-3677]
gi|423020550|ref|ZP_17011257.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4404]
gi|423025714|ref|ZP_17016410.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4522]
gi|423031533|ref|ZP_17022219.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4623]
gi|423034406|ref|ZP_17025084.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423039533|ref|ZP_17030202.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423046216|ref|ZP_17036875.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423054753|ref|ZP_17043559.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423056744|ref|ZP_17045543.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|429720575|ref|ZP_19255498.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429772475|ref|ZP_19304493.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02030]
gi|429777422|ref|ZP_19309394.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429786147|ref|ZP_19318040.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02092]
gi|429787091|ref|ZP_19318981.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02093]
gi|429792887|ref|ZP_19324733.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02281]
gi|429799466|ref|ZP_19331260.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02318]
gi|429803082|ref|ZP_19334840.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02913]
gi|429807722|ref|ZP_19339443.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-03439]
gi|429813422|ref|ZP_19345099.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-04080]
gi|429818633|ref|ZP_19350265.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-03943]
gi|429904984|ref|ZP_19370961.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429909117|ref|ZP_19375080.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-9941]
gi|429914988|ref|ZP_19380934.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429920031|ref|ZP_19385959.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429925839|ref|ZP_19391751.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429929775|ref|ZP_19395676.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429936313|ref|ZP_19402198.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429941993|ref|ZP_19407866.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429944677|ref|ZP_19410538.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429952234|ref|ZP_19418079.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429955586|ref|ZP_19421416.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec12-0466]
gi|340733277|gb|EGR62409.1| hypothetical protein HUSEC41_16313 [Escherichia coli O104:H4 str.
01-09591]
gi|340738875|gb|EGR73118.1| hypothetical protein HUSEC_16655 [Escherichia coli O104:H4 str.
LB226692]
gi|341919009|gb|EGT68621.1| hypothetical protein C22711_2651 [Escherichia coli O104:H4 str.
C227-11]
gi|354860272|gb|EHF20718.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. C236-11]
gi|354863589|gb|EHF24020.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. C227-11]
gi|354865879|gb|EHF26303.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 04-8351]
gi|354872571|gb|EHF32957.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 09-7901]
gi|354878271|gb|EHF38620.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-3677]
gi|354887708|gb|EHF47978.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4404]
gi|354891765|gb|EHF51990.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4522]
gi|354895834|gb|EHF56012.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4623]
gi|354907429|gb|EHF67491.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354909626|gb|EHF69656.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354913050|gb|EHF73046.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354915408|gb|EHF75385.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354922725|gb|EHF82637.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|406776187|gb|AFS55611.1| hypothetical protein O3M_04480 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407052762|gb|AFS72813.1| hypothetical protein O3K_04435 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066914|gb|AFS87961.1| hypothetical protein O3O_21210 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|429346319|gb|EKY83098.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02092]
gi|429357173|gb|EKY93846.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02030]
gi|429359915|gb|EKY96578.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429372465|gb|EKZ09014.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02093]
gi|429374406|gb|EKZ10945.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02281]
gi|429378088|gb|EKZ14602.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02318]
gi|429388268|gb|EKZ24693.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-02913]
gi|429391655|gb|EKZ28058.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-03439]
gi|429392046|gb|EKZ28447.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-03943]
gi|429402535|gb|EKZ38825.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. 11-04080]
gi|429404511|gb|EKZ40785.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429407785|gb|EKZ44032.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429415355|gb|EKZ51520.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429418876|gb|EKZ55015.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429425230|gb|EKZ61320.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429430273|gb|EKZ66338.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429434267|gb|EKZ70294.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429436747|gb|EKZ72762.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429441332|gb|EKZ77302.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429446292|gb|EKZ82223.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429455773|gb|EKZ91626.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec12-0466]
gi|429459119|gb|EKZ94938.1| ClpV1 family type VI secretion ATPase [Escherichia coli O104:H4
str. Ec11-9941]
Length = 849
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
+ L LE++V Q+ + IA+ VL CR+ KD VK + G
Sbjct: 540 SGLLRCLEQRVLGQRYAMSAIASQVLICRA-------DLKD--PVKPDGVFLLAGPSGTG 590
Query: 670 KEKIAKELARLVFGSHNNFVSIALSSFSSTRADST-EDSRNKRSRDEQSCSYIERFAEAV 728
K + A+ LA V+G N ++I ++ F ST + + Q + ER V
Sbjct: 591 KTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTER----V 646
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
S+NP+ V L++++E+A + F + +SG I + G VS D ++I++
Sbjct: 647 SHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMT 697
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R ++V +I+ L+ +R+ N ++ GE +V G+ +I G VP+ L++V+
Sbjct: 187 LDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVR 246
Query: 265 CLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
L + + V E E R++ + + S G I+
Sbjct: 247 IHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILF 286
>gi|17546054|ref|NP_519456.1| ATP-dependent protease [Ralstonia solanacearum GMI1000]
gi|54035873|sp|Q8XZR0.1|CLPB_RALSO RecName: Full=Chaperone protein ClpB
gi|17428350|emb|CAD15037.1| probable chaperone clpb protein [Ralstonia solanacearum GMI1000]
Length = 862
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + A +LA + + PLH+ ML G + ++ + K LE+
Sbjct: 6 LTTRFQEALADAQSLALGNDNPYIEPLHLLLAMLRQPDGATKNLLARAG---VNAKGLEI 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP G Q +L+ QA ++ G Q I
Sbjct: 63 ALDNAIKRLPQVQG----GEQVQVGRDLGSLL------QATEKEGIKRGDQ------FIA 106
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD RV RE G + +++ ++ + + S ++ + +
Sbjct: 107 SELFLLAVADDKGEAGRVAREHGLARRALEAAIDAVRGGQTVGSAEAESQREALKKYTID 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTEQARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+L++ + L L ++ R E E+R++ + N + G+ I+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILF 275
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIA---------DENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S +
Sbjct: 602 GSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|378775645|ref|YP_005177888.1| chaperone protein ClpB [Pasteurella multocida 36950]
gi|356598193|gb|AET16919.1| chaperone protein ClpB [Pasteurella multocida 36950]
Length = 855
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
T + +++A +LA + + + P+H+ +L ST + TA + PL
Sbjct: 6 FTTKFQQALQEAQSLAIGKDNQFIEPIHLLTALLNQQGGSTAPILTAS--GANLPL---- 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L N L++LP + + GG Q ++ N L K AQ Q +
Sbjct: 60 LRNELNAELSKLPQVSGS---GGDVQVSRSLVNLLNLCDKLAQQRQDKF----------- 105
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E +++ L+D ++ V+++ G ++ +E+ + + S ++ E
Sbjct: 106 --ISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQALEKY 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 TIDLTARAESGK-------LDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVE 216
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 217 GLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILF 275
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + + ++N + + R+G R G F
Sbjct: 547 VAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F N V I +S F + S
Sbjct: 601 ------LFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVG 654
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + + ++ GR+ G V +
Sbjct: 655 YEEGGYL---TEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNT 711
Query: 775 IVILS 779
+VI++
Sbjct: 712 VVIMT 716
>gi|309789553|ref|ZP_07684134.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG-6]
gi|308228289|gb|EFO81936.1| ATP-dependent chaperone ClpB [Oscillochloris trichoides DG6]
Length = 859
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 156/810 (19%), Positives = 311/810 (38%), Gaps = 139/810 (17%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A A R G+++V P H+ +L G++ + + + A++
Sbjct: 8 FTQKTYEAIEAAQNAAERAGNSEVQPEHLLYALLDQGDGVVPQVLAKMN---IAVGAIKQ 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N L + P T + M Q + ++ +AH G ++ +
Sbjct: 65 QVNAELAKFPRITGSNM---QLQIGARTRQVIL-----RAHDELGQFGDEY-------VS 109
Query: 132 LEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L++++LD + R++++AG + + + + + P + + E
Sbjct: 110 TEHLLLALLDHAGGAAERLLKQAGLTRPALLDALRAVRGSQRVTSPNPEGTYAALEQYGR 169
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+Q A R LDP+ R+E++ VI+ L + K N V++G+ +V G+
Sbjct: 170 DLTQLAQ-------RGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGDPGVGKTAIVEGL 222
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLG 305
++ GDVPE+L+ + + L + + R E E+R +K +++ R V+
Sbjct: 223 AQRVVSGDVPESLKHNRVVALDLGALIAGAKYRGEFEER---LKAVLKEIQDRDDVILFI 279
Query: 306 DLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGH 365
D A ++E M+ G ++ + ++G T Y +
Sbjct: 280 DELHTMVGAGAAEGA-----------MDAGNMLKPMLARGELHMVGATTLDEYRKHIEKD 328
Query: 366 PSLETLWSLHPLTI--PAGSLSLSLI--------------TTDSDLQSQSTSKKAESGVS 409
+LE + P+ + P+ ++S++ TDS + + +T
Sbjct: 329 AALERRF--QPIMVDPPSVEDTISILRGLKERYEAHHAVAITDSAIVAAATLSDRYISDR 386
Query: 410 WLLFEGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSP--TSSLPAWLQQYKNEKKAT 467
+L +K + + +A+ E N+ SP L + Q + E++
Sbjct: 387 FL------PDKAIDLIDESAARRRME---------NTSSPQVIDDLNRLVVQRETERE-- 429
Query: 468 LSNNDKDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHK 527
+ +KD+ ++ +K ++H+Q E A S ++ +Q
Sbjct: 430 MLKREKDAASKERLEKLEQELANLHEQRSALE-------AQRQSESALLEQIKQLKEQIN 482
Query: 528 THRDWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNST 587
T R +A+ +Q+ RE+ + + RL + L++ L++ + N+T
Sbjct: 483 TTR-FAI---EQAQREYDY------------NRAARLQYDDLARLERDLANVEATASNNT 526
Query: 588 ------SSSDIMEMEY------VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVL 635
++ DI E+ V K E E L + L +V Q + V ++N V
Sbjct: 527 LLRQEVNAQDIAEIIAKWTGIPVSKLLEGEVEKLVKMEERLHLRVIGQDEAVAAVSNAVR 586
Query: 636 KCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIA 692
+ R+G R G F F G K ++A+ LA +F V I
Sbjct: 587 RSRAGLQDPRRPLGSF------------LFLGPTGVGKTELARALAEFLFDDEQAMVRID 634
Query: 693 LSSF--SSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQK 750
+S + T A DE + EAV P+ V L +++E+A
Sbjct: 635 MSEYMEKHTVARLIGAPPGYIGYDEGG-----QLTEAVRRKPYSVVLFDEIEKAHSDVFN 689
Query: 751 GFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ ++ GR+ G V+ + +VI++
Sbjct: 690 VLLQVLDDGRLTDGQGRVVNFKNVVVIMTS 719
>gi|451845353|gb|EMD58666.1| hypothetical protein COCSADRAFT_41775 [Cochliobolus sativus ND90Pr]
Length = 920
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVA-----------NTMLAASTGLLRTACLQSHS 61
T AA + + LA+ H+Q+TPLH+A NT+ L + +++
Sbjct: 8 TDRAAKALADSFDLAKGYAHSQLTPLHLAVSLIDPPKDLANTVDVPPPPLFKQVLERANG 67
Query: 62 HPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQ 121
P +A E A+ RLP+ P + + S A+ + A+ + Q
Sbjct: 68 DP---QAFERNLKKAMVRLPSQDPPP------ERTSPSPAMAKVLRSAEELSK-----TQ 113
Query: 122 QQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSN 181
+ +AV + LI+S+ D + R++ E+ +T+ N QA+ ++ +
Sbjct: 114 KDSFIAV----DHLIMSLCQDSQIQRILAESNVPNTKQIDNAIQALR---GTKRVDSKTA 166
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
++E N + T T +++ +DP+ R ++ VI L + K N V++GE
Sbjct: 167 DAEEENENLKKFTIDMTAMAR-EGKIDPVIGREDETRRVIRILTRRTKNNPVLIGEPGVG 225
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
VV G+ +I DVP L K L L + +
Sbjct: 226 KTTVVEGLARRIVDADVPANLAACKLLSLDVGAL 259
>gi|383311735|ref|YP_005364545.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|386835582|ref|YP_006240901.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
gi|380873007|gb|AFF25374.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
HN06]
gi|385202287|gb|AFI47142.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
Length = 855
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
T + +++A +LA + + + P+H+ +L ST + TA + PL
Sbjct: 6 FTTKFQQALQEAQSLAIGKDNQFIEPIHLLTALLNQQGGSTAPILTAS--GANLPL---- 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L N L++LP + + GG Q ++ N L K AQ Q +
Sbjct: 60 LRNELNAELSKLPQVSGS---GGDVQVSRSLVNLLNLCDKLAQQRQDKF----------- 105
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E +++ L+D ++ V+++ G ++ +E+ + + S ++ E
Sbjct: 106 --ISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQALEKY 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 TIDLTARAESGK-------LDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVE 216
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 217 GLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILF 275
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + + ++N + + R+G R G F
Sbjct: 547 VAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F N V I +S F + S
Sbjct: 601 ------LFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVG 654
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + + ++ GR+ G V +
Sbjct: 655 YEEGGYL---TEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNT 711
Query: 775 IVILS 779
+VI++
Sbjct: 712 VVIMT 716
>gi|398900737|ref|ZP_10649724.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM50]
gi|398180566|gb|EJM68144.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM50]
Length = 882
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|307564635|ref|ZP_07627168.1| ATP-dependent chaperone protein ClpB [Prevotella amnii CRIS 21A-A]
gi|307346659|gb|EFN91963.1| ATP-dependent chaperone protein ClpB [Prevotella amnii CRIS 21A-A]
Length = 863
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++ A+ +A++ G + PLH+ + + + P + + +
Sbjct: 6 FTIKAQEVIQSAVNIAQQHGQQIIEPLHLLAGAIDKGKEVTNYVFQKIGVTP---QNIAM 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N + LP + GG F + +N ++ K + Q+ G I
Sbjct: 63 AVNSEIQHLPK-----VQGGEPYFSSDTNKVLQ--KATEISQQLGD----------EFIS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++L + + +R++++AG + ++K + + Q V S +S + N
Sbjct: 106 IEPLLLALLTVNSTAARILKDAGCTEKELKKAINE------LRQGQKVQS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LEKYAHNLVEDARNGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D K L + +
Sbjct: 219 ERIVRGDVPENLKDKKLYSLDMGAL 243
>gi|218696585|ref|YP_002404252.1| hypothetical protein EC55989_3283 [Escherichia coli 55989]
gi|386278774|ref|ZP_10056468.1| ClpV1 family type VI secretion ATPase [Escherichia sp. 4_1_40B]
gi|387609993|ref|YP_006098849.1| putative type VI secretion protein [Escherichia coli 042]
gi|432688956|ref|ZP_19924222.1| ClpV1 family type VI secretion ATPase [Escherichia coli KTE161]
gi|218353317|emb|CAU99301.1| conserved hypothetical protein [Escherichia coli 55989]
gi|284924293|emb|CBG37398.1| putative type VI secretion protein [Escherichia coli 042]
gi|386124287|gb|EIG72870.1| ClpV1 family type VI secretion ATPase [Escherichia sp. 4_1_40B]
gi|431234426|gb|ELF29825.1| ClpV1 family type VI secretion ATPase [Escherichia coli KTE161]
Length = 849
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
+ L LE++V Q+ + IA+ VL CR+ KD VK + G
Sbjct: 540 SGLLRCLEQRVLGQRYAMSAIASQVLICRA-------DLKD--PVKPDGVFLLAGPSGTG 590
Query: 670 KEKIAKELARLVFGSHNNFVSIALSSFSSTRADST-EDSRNKRSRDEQSCSYIERFAEAV 728
K + A+ LA V+G N ++I ++ F ST + + Q + ER V
Sbjct: 591 KTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTER----V 646
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
S+NP+ V L++++E+A + F + +SG I + G VS D ++I++
Sbjct: 647 SHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMT 697
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R ++V +I+ L+ +R+ N ++ GE +V G+ +I G VP+ L++V+
Sbjct: 187 LDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVR 246
Query: 265 CLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
L + + V E E R++ + + S G I+
Sbjct: 247 IHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILF 286
>gi|427391054|ref|ZP_18885460.1| ATP-dependent chaperone ClpB [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732392|gb|EKU95202.1| ATP-dependent chaperone ClpB [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 921
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 145/363 (39%), Gaps = 43/363 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T ++ + +A+ LA G+ QV PLH+ + +L G+ A+ L
Sbjct: 5 TTKSQEALAEAVRLATEAGNPQVEPLHLLSALLTQDGGV----------------AVALL 48
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK-IE 131
V NR A S + G P S + V + + A+ + + Q+ L I
Sbjct: 49 EAVGANR--AKISNRVNGARSALPATSGSSVQSPQAARTLAQVLTQAGQEATALGDSYIS 106
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L+++I S +++ G + + + + P + K+ E
Sbjct: 107 SEHLLLAIAQSQSQAGEILQHEGATHEALSAALPTVRGSAHVDSPDPEGTFKALEKYGQD 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+QTA K +DP+ R+ ++ VI+ L + K N V++GE +V G+
Sbjct: 167 LTQTAREGK-------MDPVVGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
++ GDVPE+LR + + L ++S R E E+R + + N ++ G IV + +
Sbjct: 220 QRMVDGDVPESLRGKRLVQLDVASMVAGAKYRGEFEERFKAVLNEIKDANGE-IVTFIDE 278
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
+ SE M+ G ++ + L+G T Y P
Sbjct: 279 IHTIVGAGGGSEGA-----------MDAGNMLKPMLARGELRLIGATTLDEYREHVETDP 327
Query: 367 SLE 369
+LE
Sbjct: 328 ALE 330
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 30/216 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + +E L L + +++ Q+ V +++ V + R+G R G F
Sbjct: 559 VGKLLQGETEKLLHLEEEIGRRLIGQEQAVRTVSDAVRRSRAGVADPNRPDGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S ++ ++ SR
Sbjct: 613 ------MFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYAE---------KHTVSRL 657
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
S Y E + EAV P+ V L+++VE+A + ++ GR+ G
Sbjct: 658 IGSPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRT 717
Query: 769 VSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEE 804
V + I++++ S+ + +QK D E
Sbjct: 718 VDFRNTILVMTSNLGSAALANPALADEQKDDAVMAE 753
>gi|403235214|ref|ZP_10913800.1| ATPase AAA [Bacillus sp. 10403023]
Length = 711
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V K +E + + L L KKV Q++ V +A V + R+G R G F
Sbjct: 401 VGKLQENEQQKMKHLAENLAKKVIGQEEAVTKVAKAVRRSRAGLKAKTRPIGSF------ 454
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +FGS + + + +S + + S
Sbjct: 455 ------LFVGPTGVGKTELTKTLAEELFGSKDAMIRLDMSEYMEKHSVSKIIGSPPGYVG 508
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 509 HEEAG---QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 565
Query: 775 IVILS 779
++I++
Sbjct: 566 VIIMT 570
>gi|398837603|ref|ZP_10594895.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM102]
gi|398118618|gb|EJM08348.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM102]
Length = 882
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|383775261|ref|YP_005459827.1| putative ATP-dependent Clp protease ATP-binding subunit
[Actinoplanes missouriensis 431]
gi|381368493|dbj|BAL85311.1| putative ATP-dependent Clp protease ATP-binding subunit
[Actinoplanes missouriensis 431]
Length = 862
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 38/297 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
LT ++ V+ A+ A RGHA V P H+ ++L + +T LLR ++P +
Sbjct: 6 LTTKSREVITTAVADAGSRGHATVEPWHMLLSLLDTGGSTATALLRAVG----ANPADVR 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
AL +LP++ G P++S V A GS + +PL
Sbjct: 62 R---AAARALEQLPSAR-----GASTAEPSLSREFVNAI---------GSADLIAKPLGD 104
Query: 128 VKIELEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEI-CSQSTPVSSNKSKE 185
+ E L+ + +V + ++ AG + + + Q E + + P + KS E
Sbjct: 105 EYVSTEHLLAGLARVGGAVGQALQSAGATEEALVAAFPQVRGGERRVTTADPEQTYKSLE 164
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L+ A K+ DP+ R+ ++ V++ L + K N V++GE +
Sbjct: 165 KYSVDLTALARDGKI-------DPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAI 217
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
V G+ +I GDVPE LRD K + L + + R + E+R++ + +R G+
Sbjct: 218 VEGLAQRIVAGDVPETLRDKKLVSLDLGAMVAGAQYRGQFEERLKSVLEEIRGSNGQ 274
>gi|294498032|ref|YP_003561732.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
megaterium QM B1551]
gi|294347969|gb|ADE68298.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
megaterium QM B1551]
Length = 704
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V K +E S + L L +KV Q++ V +A + + R+G R G F
Sbjct: 394 VGKLQENESAKMKHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRPIGSF------ 447
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +FGS + V + +S + A S
Sbjct: 448 ------LFVGPTGVGKTELTKTLAEELFGSKDAMVRLDMSEYMEKHAVSKLIGSPPGYVG 501
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 502 HEEAG---QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 558
Query: 775 IVILS 779
++I++
Sbjct: 559 VIIMT 563
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 33/268 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + +A +LA R H + P+H+ ML G +R Q+ + L
Sbjct: 6 LTTKFQMAIAEAQSLAVGRDHQFIEPVHLMMAMLDQEGGGVRPLLQQAG---VNLNKLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQPLLAVK 129
AL +P T T GG +SN L + A +R+
Sbjct: 63 QLGEALEHMPQVTGT---GGEVH---LSNELGRLLNLTDKLAQKRKDQY----------- 105
Query: 130 IELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+ E I+++L+D +++++ +AG + V+ VEQ + ++ E
Sbjct: 106 LSSELFILAVLEDGKSRLAQILEQAGAAKAPVEQAVEQVRGGQAVDDPNAEEQRQALEKY 165
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A K LDP+ R++++ ++ L + K N V++GE +V
Sbjct: 166 TIDLTERAEQGK-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGTGKTAIVE 218
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I +VPE L++ + L L + +
Sbjct: 219 GLAQRIVNAEVPEGLKNKRVLSLDLGAL 246
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL ++V Q + + +AN + + R+G R G F
Sbjct: 549 VSKMLEGERDKLLRMEEALHERVVGQDEAIGAVANAIRRSRAGLSDPNRPNGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 603 ------LFLGPTGVGKTELCKALAEFLFDTQEAMVRIDMSEFMEKHSVARLIGAPPGYVG 656
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ E V P+ V L+++VE+A + ++ GR+ S G V +
Sbjct: 657 YEEGGYL---TEHVRRKPYSVILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNT 713
Query: 775 IVILSC 780
+++++
Sbjct: 714 VIVMTS 719
>gi|359777397|ref|ZP_09280678.1| chaperone ClpB [Arthrobacter globiformis NBRC 12137]
gi|359305175|dbj|GAB14507.1| chaperone ClpB [Arthrobacter globiformis NBRC 12137]
Length = 885
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 142/344 (41%), Gaps = 41/344 (11%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ QV P H+ ++ G+ + + P A+ + + A+ LPA++ G
Sbjct: 24 GNPQVEPAHLLKALMDQREGVAVALLRATGADP---DAVSVQASTAIKALPATS-----G 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSRVM 149
Q +S + A + AQ N+ L + E L++ + V R++
Sbjct: 76 SSVQQAQLSRPSLQAIQNAQ---------NEADKLGDSFVSTEHLLLGLSAGSDGVGRLL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
R+AG S + + + + P ++ ++ E L+ A + K LDP
Sbjct: 127 RDAGASHEALAAALPGVRGDRKVNTPDPENTFQALEKFGTDLTAVARSGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE VV G+ ++ GDVPE+LR +
Sbjct: 180 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVAGDVPESLRGKTLIA 239
Query: 268 LSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L ++S R E E+R++ + +++ GR IV + +L +S E
Sbjct: 240 LDLASMVAGAKYRGEFEERLKAVLEEIKNSEGR-IVTFIDELHTVVGAGASGESA----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
M+ G ++ + L+G T Y P+LE
Sbjct: 294 ------MDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALE 331
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 22/180 (12%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFF 662
S+ L + L K++ Q V +++ V + R+G R G F F
Sbjct: 561 SQKLLHMEEELGKRLIGQSKAVTAVSDAVRRARAGISDPNRPTGSF------------LF 608
Query: 663 QGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE 722
G K ++AK LA +F V I +S +S + + Y E
Sbjct: 609 LGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVA-----RLVGAPPGYVGYEE 663
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L+++VE+A + ++ GR+ G V L + I++L+
Sbjct: 664 GGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDLRNVILVLTS 723
>gi|170085149|ref|XP_001873798.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651350|gb|EDR15590.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 908
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 154/384 (40%), Gaps = 59/384 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTGLLRTAC 56
T + + +A+ LA+ +AQV P H+A ++ +++ L +
Sbjct: 7 FTDKTQQTLAEAIQLAKDYANAQVHPAHLAFVLINEASAEPSVQGGAPPSSNASLFSSVI 66
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
++ P A++ + RLPA + P + +S+A + + AQ
Sbjct: 67 SRAGGDP---TAVKRSIQKLIVRLPAQSPPP------EETNLSSAALKVLREAQ------ 111
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
N Q+ + I + L++++L DPS++ V++E + +K+ +EQA T
Sbjct: 112 ---NLQKTMHDSYIAQDHLLLALLKDPSIAGVLKENSLNEATLKTAIEQARGNRRIESKT 168
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ + + L+ A K+ DP+ R+ ++ I L + K N V++G
Sbjct: 169 AEQGFDALQKYAVDLTALAEEGKI-------DPVIGRDNEIRRAIRILCRRTKNNPVLIG 221
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLV 292
E + G+ +I K DVP +L + L + + + E E+R++ + N V
Sbjct: 222 EPGVGKTAIAEGLAQRIVKRDVPASLI-ARLFSLDMGALMAGAKYKGEYEERIKAVLNEV 280
Query: 293 RSCL---GRGIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWL 349
G GI+L + +L A + G M+ G L + +
Sbjct: 281 EKAAEDGGPGIILFIDELHL--IMAGRGAEGGG---------MDAGNLFKPLLARGKLRC 329
Query: 350 MGIATFQSYMRCKSGHPSLETLWS 373
+G T Y + P+LE ++
Sbjct: 330 IGATTLSEYRKYIETDPALERRFA 353
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
E L L + + V Q D V +AN + RSG + + G
Sbjct: 579 EKLLRLEKVMSESVVGQYDAVKAVANAIRLSRSGL---------SNPNRPVASFLMAGPS 629
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALSSFSS----TRADSTEDSRNKRSRDEQSCSYIE 722
K +AK LA ++F S + + I S +S +R + Q YI
Sbjct: 630 GTGKTLLAKTLATVLFDSPDTMIRIDASEYSEKHSISRLIGSPPGYVGYDAGGQLTEYIR 689
Query: 723 RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
R P+ + LI+++E+A F + ++ GR+ G V + + ++I++
Sbjct: 690 R-------KPYSIILIDEIEKACREFVTLFLQVLDDGRLTDGQGRVVDMRNTVIIMT 739
>gi|54035818|sp|Q7X2S8.1|CLPB_MEIRU RecName: Full=Chaperone protein ClpB
gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber]
Length = 854
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A + Q+ LAR H+++ H+A ML + GL ++ +P + +
Sbjct: 7 TEQARQAIAQSQVLARESAHSKIDLPHLAAVMLRDAAGLPAKIVQKAGQNP---QNIYQA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
L RLP + T GG +S+ L +A RA+ LA
Sbjct: 64 AQSELGRLPKVSGTE--GGQY----LSSRLASALGRAEK--------------LA----- 98
Query: 133 EQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV-- 190
++L + ++ + E G+ Q S V QA+ EI T S + N L
Sbjct: 99 DELKDRFVALDTLLLALAETGYGGLQA-SAVRQALQ-EIRGGRTVNSEHAEGTYNALEQY 156
Query: 191 ---LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ A K LDP+ R+E++ VI+ L+ + K N V++GE VV
Sbjct: 157 GLDLTRQAEEGK-------LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAVVE 209
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I KGDVPE L+ + + L + S
Sbjct: 210 GLAQRIVKGDVPEGLKGKRIVSLQMGSL 237
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L L + L K+V Q + + +A+ + + R+G KD + +
Sbjct: 538 VAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAG-------LKDPN--RPI 588
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS--TRADSTEDSRNKRSRDE 715
F G K ++AK LA +F + N V I +S + T A +E
Sbjct: 589 GSFLFLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEE 648
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV P+ V L +++E+A + ++ GR+ G V + +
Sbjct: 649 GG-----QLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTV 703
Query: 776 VILSC 780
+IL+
Sbjct: 704 IILTS 708
>gi|108763122|ref|YP_633246.1| ATP-dependent chaperone protein ClpB [Myxococcus xanthus DK 1622]
gi|108467002|gb|ABF92187.1| ATP-dependent chaperone protein ClpB [Myxococcus xanthus DK 1622]
Length = 874
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 130/295 (44%), Gaps = 31/295 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A + + +LARR + Q P H+A +L G++ L+ ++ A L
Sbjct: 7 TVKAQEAIHEGQSLARRADNPQYEPEHLAAALLGQKDGIV-DPLLRKIGADVKLFAARL- 64
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP M GG + L+ F +A E++ + L I
Sbjct: 65 -GEALQKLPR-----MQGGESAM--LGQRLLKTFDKA---------EDEAKSLKDEFISS 107
Query: 133 EQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L++++ D +V VM+ +G + +V S +++ + ++ ++ E L
Sbjct: 108 EHLLLALTHDKGAVGEVMKSSGVTRERVLSGLKEVRGSGRVTSQDAEATYQALEKYGRDL 167
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A + K LDP+ R+E++ ++ L + K N V++GE + G+
Sbjct: 168 TEAARSGK-------LDPVIGRDEEIRRCVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAR 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE L++ + + L + + R E E+R++ + + G I+
Sbjct: 221 RIVDGDVPEGLKNKRLVSLDLGAMVAGAKYRGEFEERLKAVLKEIADAAGEVILF 275
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 45/267 (16%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E + L + + L +V Q+ + ++N V + RSG R G F
Sbjct: 550 VSRLMEGEVQKLVHMEDRLANRVIGQRSAIEAVSNAVRRARSGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K + AK LA +F + V I +S + S R
Sbjct: 604 ------IFLGPTGVGKTETAKALAEFLFDDDSAMVRIDMSEYMEKHSVARLVGAPPG--- 654
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + + ++ GR+ S G
Sbjct: 655 ------YVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRT 708
Query: 769 VSLGDAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLD-LNICIDDD 827
V + ++IL+ + S+ K++ D E + M+ + LN
Sbjct: 709 VDFKNTVLILTS-NIGSQDIQAGMAGKEELD--ERTRNEVMDALRAHFRPEFLN------ 759
Query: 828 STEDQSIDDIGLLESVDKRIIFKIMEL 854
+D+I + E + K+ I++I++L
Sbjct: 760 -----RVDEIVIFEPLRKKDIYRIVDL 781
>gi|148252760|ref|YP_001237345.1| chaperone [Bradyrhizobium sp. BTAi1]
gi|146404933|gb|ABQ33439.1| Chaperone [Bradyrhizobium sp. BTAi1]
Length = 879
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 30/291 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L S GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP + + G Q +S L F A+ + + +
Sbjct: 64 TEDALGKLPKVSGS----GAGQI-YLSPELARGFDAAEKAAEKAGDSF---------VTV 109
Query: 133 EQLIISI-LDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+L++ + LD S ++ + G ++ + + +E +T ++ + +
Sbjct: 110 ERLLLGLTLDKNSETGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D + L L + + R E E+R++ + V + G
Sbjct: 223 LRIVNGDVPESLKDKRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEG 273
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPHRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|433456518|ref|ZP_20414558.1| chaperone ClpB [Arthrobacter crystallopoietes BAB-32]
gi|432196146|gb|ELK52627.1| chaperone ClpB [Arthrobacter crystallopoietes BAB-32]
Length = 868
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ Q+ P+H+ ++ G+ + + P + + + A+ LPAS+ T +
Sbjct: 24 GNPQIEPVHLLKALMDQREGVAVALLKATGTDP---DTVSVQASTAIKALPASSGTSV-- 78
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISIL-DDPSVSRVM 149
Q+ S ++ AQ + + L + E L++ + D+ + +V+
Sbjct: 79 AQAQY---SRGILQVINVAQ---------QEAEKLGDSYVSTEHLLLGLAADNGAAGKVL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
REAG S + + + + + P ++ ++ E + L+ A + K LDP
Sbjct: 127 REAGASHEALSAALPGVRGDRKVTNADPENTFQALEKFGVDLTAIARSGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE VV G+ +I GDVPE+LR +
Sbjct: 180 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRGKTLIS 239
Query: 268 LSISSF--RHMNRVEVEQR----VEEIKN 290
L + S R E E+R +EEIKN
Sbjct: 240 LDLGSMVAGAKYRGEFEERLKAVLEEIKN 268
>gi|352105799|ref|ZP_08960963.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
HAL1]
gi|350598222|gb|EHA14345.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
HAL1]
Length = 859
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 28/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
TA+ S + +A +LA RGH Q+ P H+ +L ++ ++ P + +
Sbjct: 6 FTAKLQSAIAEAQSLAVGRGHNQLDPAHLLLALLDTKDTGIKALIEKAEGSPSRLRD--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
L+ LP G Q P S + F + Q+RG + +L +
Sbjct: 63 GLIQQLDNLP---KVGQFDGEVQ-P--SRDFIKLFNLTDREAQKRGDQFIASELVLLAAL 116
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+ + +L D ++R EA +S + + V+ A ++ + NK +
Sbjct: 117 EMNSALTKLLKDSGINRKSLEAAINSLRGGATVDDA-----NAEDQREALNKY----TMD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTQRALDGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE L+D + L L + S
Sbjct: 221 QRIVNGEVPEGLKDKRVLSLDMGSL 245
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL ++V Q + V +AN V + R+G R G F
Sbjct: 550 VSKMLEGERDKLLRMEEALHERVIGQDEAVEAVANAVRRSRAGLSDPNRPNGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 604 ------LFLGPTGVGKTELCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 657
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 658 YEEGGYL---TEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT 714
Query: 775 IVILSC 780
+++++
Sbjct: 715 VIVMTS 720
>gi|367028116|ref|XP_003663342.1| heat shock protein HSP98 [Myceliophthora thermophila ATCC 42464]
gi|347010611|gb|AEO58097.1| heat shock protein HSP98 [Myceliophthora thermophila ATCC 42464]
Length = 925
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTGLLRTAC 56
T A ++ AM LA + H+Q+ P+H+A +L ++ L R
Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSRDQQNAAPGTTSTLFRQVI 66
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
++H P Q + L RLP+ P P+ + L A + +
Sbjct: 67 ERAHGDPQQ---FDRALKKTLVRLPSQDPPP--DQVSMAPSFNTVLRKAMELQKV----- 116
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q+ +AV + LI ++ +D ++ ++EA ++ ++ A+S ++
Sbjct: 117 ----QKDTYIAV----DHLITALAEDHTIQTALKEANIPKPKL---IQDAISAIRGTKRV 165
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ ++E N + T T +++ LDP+ R E++ VI L + K N V++G
Sbjct: 166 DSRNADAEEENENLAKFTVDMTAMAR-EGKLDPVIGREEEIRRVIRILSRRTKNNPVLIG 224
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR-------V 285
E VV G+ +I DVP+ L K L L + + + R E E+R +
Sbjct: 225 EPGVGKTTVVEGLAQRIVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKSVLKEI 284
Query: 286 EEIKNLV 292
EE K+++
Sbjct: 285 EESKDMI 291
>gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|54035839|sp|Q89UL2.1|CLPB_BRAJA RecName: Full=Chaperone protein ClpB
gi|27349656|dbj|BAC46669.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
Length = 879
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + ++ A +LA R GH Q + LHV +L + GL A L + +A+
Sbjct: 7 TERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGL--AAGLIDRAGG-NSRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAV 128
ALN++P + GG Q P ++ AA K A ++ G S ++ LL +
Sbjct: 64 TEDALNKVPKVSG----GGAGQIYLAPELARTFDAAEK---AGEKAGDSFVTVERLLLGL 116
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E ++ + G + + + +E +T ++ + +
Sbjct: 117 TLE---------KTSEAGTILSKGGVTPQNLNAAIEALRKGRTADSATAENAYDALKKYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+ +I GDVPE+L+D K L L + + R E E+R++ +
Sbjct: 221 LALRIVNGDVPESLKDKKLLSLDLGALIAGAKYRGEFEERLKAV 264
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|410862267|ref|YP_006977501.1| ClpB protein [Alteromonas macleodii AltDE1]
gi|410819529|gb|AFV86146.1| ClpB protein [Alteromonas macleodii AltDE1]
Length = 858
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 30/288 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ ML G +R Q++ + AL + A+ R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQAN---INVNALRSALSQAIER 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP +GG Q S L+ + A QR+ I E +++
Sbjct: 71 LPRIEG---IGGDVQLSKDSGILLNLCDKI-AQQRKDEY-----------ITSEIFVLAA 115
Query: 140 LDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASAT 198
L+D + +++ + ++S ++ + + ++ E L++ A
Sbjct: 116 LEDKGRLGEILKSLNITKDAIESAIDDMRGGQKVTDPNAEDVRQALEKYTTDLTERAEQG 175
Query: 199 KVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDV 256
K LDP+ R++++ ++ L + K N V++GE +V G+ +I G+V
Sbjct: 176 K-------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228
Query: 257 PEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
PE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 229 PEGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILF 276
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L K+V Q++ V ++N + + R+G R G F
Sbjct: 548 VARMLEGEREKLLRMEDVLHKRVVGQEEAVQSVSNAIRRSRAGLADPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + + I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAGFMFDTEDAMIRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|357042124|ref|ZP_09103830.1| chaperone ClpB [Prevotella histicola F0411]
gi|355369583|gb|EHG16974.1| chaperone ClpB [Prevotella histicola F0411]
Length = 864
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ A+R G + PLH+ ++ ++ + Q +Q +E
Sbjct: 6 FTIKAQEAVQSAVNTAQRNGQQTIEPLHLLAGVMDKGKDVV-SYVFQKLGVNIQT--VES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LP + GG F + SN Q QR I Q +
Sbjct: 63 AIGNEIAHLPKVSG----GGEPYFSSESN---------QVMQRTMDI---SQKFGDEFVS 106
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++++L + + SR++++AG S ++ + + + + + +S E
Sbjct: 107 IEPMLLALLAVNSTASRILKDAGCSEQEMTAAINDLRQGQKVQTQSGDENYQSLEKFARN 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A A K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 167 LIEDARAGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
++I +GDVPE L+D + L + + + E E+R++ + N V G I+
Sbjct: 220 ERIVRGDVPENLKDKQLYSLDMGALLAGAKYKGEFEERLKSVINEVMKSEGNIILF 275
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +A+ V + R+G K K F G
Sbjct: 556 DKLLHLEDELHKRVIGQDEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 606
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS +R Y E
Sbjct: 607 GTGKTELAKALADYLFNDESMLTRIDMSEYQEKFSVSRLIGAPPG---------YVGYDE 657
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 658 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTS 717
>gi|295703385|ref|YP_003596460.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
megaterium DSM 319]
gi|294801044|gb|ADF38110.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
megaterium DSM 319]
Length = 704
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V K +E S + L L +KV Q++ V +A + + R+G R G F
Sbjct: 394 VGKLQENESAKMKHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRPIGSF------ 447
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +FGS + V + +S + A S
Sbjct: 448 ------LFVGPTGVGKTELTKTLAEELFGSKDAMVRLDMSEYMEKHAVSKLIGSPPGYVG 501
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 502 HEEAG---QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 558
Query: 775 IVILS 779
++I++
Sbjct: 559 VIIMT 563
>gi|237809508|ref|YP_002893948.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
gi|237501769|gb|ACQ94362.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
Length = 858
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + + A +LA + H + P+H+ +L G +R + + + L
Sbjct: 6 LTSKFQTAISDAQSLALGKDHQFIEPIHIMTALLDQQGGSIRPLLILAGCN---VDTLHQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L+RLP + + G Q P + L K +Q Q + I
Sbjct: 63 RLTQELDRLPRVSG---VDGDIQISPQLGRILNMCDKLSQQRQDQF-------------I 106
Query: 131 ELEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++ LDD ++ ++R+ G ++ +E+ E + + ++ E +
Sbjct: 107 SSEMFLLAALDDRGTLGDLLRQNGVVKDKLDKAIEKVRGGEKVTDAGAEEKRQALEKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R+E++ ++ L + K N V++GE +V G+
Sbjct: 167 DLTERAEQGK-------LDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSFR--HMNRVEVEQRVEEIKN 290
+I G+VPE L+ + L L + S R E E+R++ + N
Sbjct: 220 AQRIINGEVPEGLKHKRVLSLDMGSLLAGAKYRGEFEERLKAVLN 264
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E + L + L ++V Q + V +AN + + R+G MR G F
Sbjct: 548 VARMLEGERDKLLRMEEKLHQRVIGQDEAVNAVANAIRRSRAGLSDPMRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +A
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNA 712
Query: 775 IVILS 779
++I++
Sbjct: 713 VIIMT 717
>gi|118443072|ref|YP_878374.1| clpB protein [Clostridium novyi NT]
gi|118133528|gb|ABK60572.1| clpB protein [Clostridium novyi NT]
Length = 866
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E E L L + L+K+V Q + ++N V++ R+G KD E +
Sbjct: 555 VTRLVEGEKEKLLRLEDELKKRVIGQDEATVAVSNAVIRARAG-------LKD--ERRPI 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 606 GSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVS-----RLVGPPPGY 660
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV NP+ V L +++E+A+ F + ++ GR+ + G V + I
Sbjct: 661 VGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQILDDGRLTDNKGKTVDFKNTI 720
Query: 776 VILSCESFSS 785
+I++ SS
Sbjct: 721 IIMTSNLGSS 730
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ I L + K N V++GE +V G+ ++I +GDVPE L++
Sbjct: 182 LDPVIGRDEEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKEKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V+S G+ I+
Sbjct: 242 IFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGKIILF 281
>gi|433640507|ref|YP_007286266.1| Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (Heat Shock Protein f84.1) [Mycobacterium
canettii CIPT 140070008]
gi|432157055|emb|CCK54326.1| Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (Heat Shock Protein f84.1) [Mycobacterium
canettii CIPT 140070008]
Length = 848
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 147/788 (18%), Positives = 285/788 (36%), Gaps = 130/788 (16%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ ++ P H+ +L + G+ P +A L+RLP +T
Sbjct: 25 GNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRL---LDRLPQAT------ 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSRVM 149
G P +S +AA AQ Q I+++ + E +++ + D V++++
Sbjct: 76 GASTQPQLSRESLAAITTAQ--QLATEIDDEY-------VSTEHVMVGLATGDSDVAKLL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
G S ++ + + P ++ ++ + L+ A K LDP
Sbjct: 127 TGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD +
Sbjct: 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239
Query: 268 LSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L + S + R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSLETL 371
M+ G ++ + L+G T Y + G PS+E
Sbjct: 294 ------MDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDT 347
Query: 372 WSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLFEGE 416
+ H + I +L + +D + ++ KA + S L E +
Sbjct: 348 IGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEID 407
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSG 476
++ + E E +L S D ++ A L+ ++K L+
Sbjct: 408 SRPVEIDEVERLVRRLEIEEMAL---SKEEDDASAERLAKLRSELADQKEKLA------- 457
Query: 477 VRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHRDWA 533
+L +W + N+I E+ S + G + + +Y + +
Sbjct: 458 --ELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLD 515
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIM 593
P+ RE L D S IP + L+ ++ ++
Sbjct: 516 AALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETAKLL 562
Query: 594 EMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE 653
ME + L K+V QK V +++ V + R+G S+
Sbjct: 563 RME-----------------DELGKRVIGQKAAVTAVSDAVRRSRAGV----------SD 595
Query: 654 VKEETWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRS 712
T F F G K ++AK LA +F V I +S + +
Sbjct: 596 PNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGY 655
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
++ + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 656 VGYEAGG---QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFR 712
Query: 773 DAIVILSC 780
+ I+IL+
Sbjct: 713 NTILILTS 720
>gi|285017507|ref|YP_003375218.1| ATP-dependent clp protease subunit protein [Xanthomonas albilineans
GPE PC73]
gi|283472725|emb|CBA15230.1| putative atp-dependent clp protease subunit protein [Xanthomonas
albilineans GPE PC73]
Length = 861
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 30/284 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ + A +LA R H + P+HV +L + G R Q+ + AL
Sbjct: 6 LTSRFQQALADAQSLAVGRDHTIIEPVHVFTALLDQAGGSTRPLLAQAG---VNVPALRE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL +LP + P G + L K AQ H N Q I
Sbjct: 63 RLGEALEKLPKVSGQP--GNLSMGNDLGRLLNQTDKLAQQH-------NDQ------FIP 107
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ +DD V +R +G ++++ ++ E ++ +
Sbjct: 108 SEWFVLAAVDDAGVLGLALRASGADKKKLEAAIDTLRGGETVQSENAEDQRQALGKYTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A + K LDP+ R+E++ ++ L + K N V++GE +V G+
Sbjct: 168 LTARAESGK-------LDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VPE LR + L L + + R E E+R++ + N
Sbjct: 221 QRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKGVLN 264
>gi|182413767|ref|YP_001818833.1| ATP-dependent chaperone ClpB [Opitutus terrae PB90-1]
gi|177840981|gb|ACB75233.1| ATP-dependent chaperone ClpB [Opitutus terrae PB90-1]
Length = 872
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 30/298 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + V +A +ARR H +V H+ + +L G++ + P A++L
Sbjct: 6 LTQMSRQAVTEAQNVARRLHHNEVDTWHLLSALLGQENGIVPGLLDKLAITP---SAVQL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L RLP T + ++ A+ A RA+ G ++++ +
Sbjct: 63 AVERELERLPKVTGSV----DTSKVYVTQAVNEALTRAEDEA--GKLKDEY-------VS 109
Query: 132 LEQLIISILD---DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L + +L+ ++ ++ + G +V ++ + + P ++ ++ E
Sbjct: 110 VEHLFLGLLEVGKPDALKKLFKSFGLDRAKVLKALQDVRGAQRVTTDNPEATYQALEKYG 169
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L A K +DP+ R+E++ I L K K N V++GE +V G
Sbjct: 170 IDLVAQARKGK-------MDPVIGRDEEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEG 222
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I +GDVPE L+D L + + R E E+R++ + ++ GR ++
Sbjct: 223 LAQRILRGDVPEGLKDKTIFALDMGALVAGAKYRGEFEERLKAVLTEIKQSEGRVLLF 280
>gi|380494216|emb|CCF33316.1| hsp98-like protein [Colletotrichum higginsianum]
Length = 923
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T V+ AM LA + H+Q+ P+H+A ++L ++ + R
Sbjct: 7 FTDRGEKAVQDAMALAEQYAHSQLLPVHLAVSLLDPPADLSKDQQNGPPQTSSMFRQVIE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++H P +A + L RLP+ P +++ A ++AQ Q+
Sbjct: 67 RAHGDP---QAFDRALKKTLVRLPSQDPPP------DQVSVAPTFHAVLRKAQELQK--- 114
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
Q+ +AV + LI ++ +D ++ ++E+ ++ V AV+ ++
Sbjct: 115 --TQKDSFIAV----DHLIQALAEDHTIQTCLKESNVPKAKL---VHDAVAQIRGTKRVD 165
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGE 235
+ ++E + + T T +++ + ++DP+ R E++ V+ L + K N V++GE
Sbjct: 166 SKNADTEEEHENLAKFTIDMTALARDK-NMDPVIGREEEIRRVVRILSRRTKNNPVLIGE 224
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
VV G+ +I DVP+ L+ K L L + +
Sbjct: 225 PGVGKTTVVEGLAQRIVNRDVPDNLKACKLLSLDVGAL 262
>gi|92112632|ref|YP_572560.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
gi|91795722|gb|ABE57861.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
Length = 860
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 36/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T++ + + +A +LA R H Q+ P HV ++ A ++ ++ + +
Sbjct: 6 MTSKLQNALAEAQSLAVGRSHNQLDPGHVLMALVEAQESGIKGLVQKAGGDTARLRD--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
+ L+ LP S G+ T+ L F A + Q+RG + ++ +
Sbjct: 63 GLSQYLDGLP---SVGQFDGNV---TMGQELARLFNFADREAQKRGDQYIASELVVLAAL 116
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES---N 187
E++ ++S+V+++AG V+S ++ SL S+ S+ +S+E+
Sbjct: 117 EMK---------SAISKVLQQAGLDVQSVRSAID---SLRGGSKVDDASAEESREALDKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L+Q A K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 165 TTDLTQRAGEGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L+D + L L + S R E E+R++ + + GR I+
Sbjct: 218 GLAQRIVNGEVPEGLKDKRVLALDMGSLLAGAKYRGEFEERLKAVLGELAKEEGRVILF 276
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL ++V Q + V +AN V + R+G R G F
Sbjct: 550 VSKMLEGERDKLLRMEEALHERVIGQDEAVTAVANAVRRSRAGLADPGRPNGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 604 ------LFLGPTGVGKTELCKSLASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 657
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 658 YEEGGYL---TEAVRRKPYSVLLLDEVEKAHADVFNILLQVLEDGRLTDGQGRTVDFRNT 714
Query: 775 IVILSC 780
+++++
Sbjct: 715 VIVMTS 720
>gi|116075417|ref|ZP_01472677.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9916]
gi|116067614|gb|EAU73368.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9916]
Length = 877
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 130 IELEQLIISILDDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I +E L++++ DD R++ + G +T +K+ ++ + + P + +S E
Sbjct: 107 IAIEHLVLALADDSRCGKRLLNQVGADATSLKTAIDAVRGSQTVTDQNPEGTYESLEKYG 166
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+ A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 167 RDLTAAARDGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVP+AL++ + + L + + R E E+R++ + V S GR IVL
Sbjct: 220 LAQRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSEGR-IVL 276
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L SL + L ++V Q+ V +A+ + + R+G D + +
Sbjct: 555 VAKLVQSEMEKLLSLESQLHERVVGQQQAVTAVADAIQRSRAG-------LSDPN--RPI 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K +++K LA +F S + V I +S + + S ++
Sbjct: 606 ASFLFLGPTGVGKTELSKALAAQLFDSDDAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEA 665
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EA+ P+ V L ++VE+A + ++ GR+ G V +A++I
Sbjct: 666 GG---QLTEAIRRRPYSVVLFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLI 722
Query: 778 LSC 780
L+
Sbjct: 723 LTS 725
>gi|383785544|ref|YP_005470114.1| chaperone clpB [Leptospirillum ferrooxidans C2-3]
gi|383084457|dbj|BAM07984.1| chaperone clpB [Leptospirillum ferrooxidans C2-3]
Length = 863
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 30/312 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ ++ A+ ARRRG+ V P+H+ +L GL+ L+ +AL+
Sbjct: 6 LTIKSQEALQSAVDEARRRGNTLVEPIHLLRELLVQEGGLV-IPLLEKMGT--GQEALKA 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ LP T + G P++S + RAQ + + +
Sbjct: 63 KTDEAIKLLPTVTGS----GAGSGPSLSRSTGDLLDRAQEEAKTFKDDF---------VS 109
Query: 132 LEQLIISILDDPSV-SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E ++++++ S++++ AG +V + + + + P E
Sbjct: 110 VEHILLAMIGGSGTESKLLKGAGLDREKVMKALTEVRGNQRVTDQNP-------EDKYQA 162
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ + LDP+ R+ ++ V++ L + K N V++G+ +V G+
Sbjct: 163 LSKFGRDLTAMAKQNKLDPVIGRDAEIRRVVQVLSRRTKNNPVLIGDPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE L+D L + S R + E+R++ + V GR I+L + +
Sbjct: 223 QRIVSGDVPEGLKDRTIFALDLGSLLAGAKYRGDFEERLKAVLKEVTGSDGR-IILFIDE 281
Query: 307 LEWAEFRASSSE 318
L RA ++E
Sbjct: 282 LHTI-VRAGATE 292
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E + L + L +V Q++ + ++N + + R+G R G F
Sbjct: 552 VSRMLEGEVQKLLQMEERLGSRVVGQQEALAAVSNAIRRARAGIQDPNRPLGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
FF G K ++AK LA +F S + I +S + A S
Sbjct: 606 ------FFLGPTGVGKTELAKALAEFLFDSDQAMIRIDMSEYMEKHAVS-----RLVGAP 654
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E++ P+ V L+++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGQLTESIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRVVDFR 714
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 715 NTVIIMTS 722
>gi|384048146|ref|YP_005496163.1| ATPase [Bacillus megaterium WSH-002]
gi|345445837|gb|AEN90854.1| ATPase AAA-2 domain protein [Bacillus megaterium WSH-002]
Length = 704
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K +E S + L L +KV Q++ V +A + + R+G + H +
Sbjct: 394 VGKLQENESAKMKHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAK------HRPI--- 444
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +FGS + V + +S + A S +
Sbjct: 445 GSFLFVGPTGVGKTELTKTLAEELFGSKDAMVRLDMSEYMEKHAVSKLIGSPPGYVGHEE 504
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ E V NP+ + L++++E+A Q F + +E GR+ S G VS D ++I
Sbjct: 505 AG---QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVII 561
Query: 778 LS 779
++
Sbjct: 562 MT 563
>gi|407367346|ref|ZP_11113878.1| ClpB protein [Pseudomonas mandelii JR-1]
Length = 882
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLERFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|417854553|ref|ZP_12499843.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338217755|gb|EGP03595.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 855
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
T + +++A +LA + + + P+H+ +L ST + TA + PL
Sbjct: 6 FTTKFQQALQEAQSLAIGKDNQFIEPVHLLTALLNQQGGSTAPILTAS--GANLPL---- 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L N L++LP + + GG Q ++ N L K AQ Q +
Sbjct: 60 LRNELNAELSKLPQVSGS---GGDVQVSRSLVNLLNLCDKLAQQRQDKF----------- 105
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E +++ L+D ++ V+++ G ++ +E+ + + S ++ E
Sbjct: 106 --ISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQALEKY 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 TIDLTARAESGK-------LDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVE 216
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 217 GLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILF 275
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + + ++N + + R+G R G F
Sbjct: 547 VAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F N V I +S F + S
Sbjct: 601 ------LFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVG 654
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + + ++ GR+ G V +
Sbjct: 655 YEEGGYL---TEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNT 711
Query: 775 IVILS 779
+VI++
Sbjct: 712 VVIMT 716
>gi|114704329|ref|ZP_01437237.1| endopeptidase Clp ATP-binding chain B, clpB [Fulvimarina pelagi
HTCC2506]
gi|114539114|gb|EAU42234.1| endopeptidase Clp ATP-binding chain B, clpB [Fulvimarina pelagi
HTCC2506]
Length = 872
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 33/294 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T+A R H Q TP H+ ++ G+ A L + + K L L AL+
Sbjct: 14 IQAAQTMAVSRDHQQFTPEHLLKVLVDDEEGM--AARLMEKAGG-RVKDLRLAVEAALDA 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
+P T GG + ++ L F A+ A + S + ++ LLA+ +E
Sbjct: 71 MPKVT-----GGGQMY--LAQPLAKVFATAEEIAKKAGDSFVSVERLLLAMTVE------ 117
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
+ +++ AG ++ + + + + + S ES L + A
Sbjct: 118 ---KSAKTADILKRAGVTANGLNAAINDL-------RKGRTADTASAESGYDALKKYARD 167
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ ++ L + K N V++GE + G+ +I GD
Sbjct: 168 LTAVARDGKLDPVIGRDDEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 227
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
VPE+LRD + + L + + R E E+R++ + + + S G G++L + ++
Sbjct: 228 VPESLRDKQLMALDMGALIAGAKYRGEFEERLKAVLSEIASAAG-GVILFIDEM 280
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 73/192 (38%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + +AL K+V Q + V ++ V + R+G R G F
Sbjct: 549 VDRMLEGEREKLLRMEDALAKRVVGQGEAVQSVSRAVRRARAGLQDPNRPIGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V + +S F S R
Sbjct: 603 ------IFLGPTGVGKTELTKALAHFLFDDEAAMVRLDMSEFMEKHSVARLIGAPPG--- 653
Query: 711 RSRDEQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E A EAV P++V L +++E+A + ++ GR+ G
Sbjct: 654 ------YVGYEEGGALTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRT 707
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 708 VDFRNTMIIMTS 719
>gi|379722287|ref|YP_005314418.1| protein ClpE [Paenibacillus mucilaginosus 3016]
gi|378570959|gb|AFC31269.1| ClpE [Paenibacillus mucilaginosus 3016]
Length = 712
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K ++ + L L LE KV Q + V +A V + R+G + K
Sbjct: 400 VGKLQQDEAAKLKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPKN---------KPI 450
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE-DSRNKRSRDEQ 716
F G K +++K LA +FG + + + +S + + S S E+
Sbjct: 451 ASFLFVGPTGVGKTELSKSLAEELFGRADAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEE 510
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
+ ER V NP+ + L++++E+A Q F + +E GR+ S G VS D ++
Sbjct: 511 AGQLTER----VRRNPYSIILLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTVSFKDTVI 566
Query: 777 ILS 779
I++
Sbjct: 567 IMT 569
>gi|15603569|ref|NP_246643.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|425064424|ref|ZP_18467549.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
gi|54035898|sp|Q9CKC0.1|CLPB_PASMU RecName: Full=Chaperone protein ClpB
gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70]
gi|404381174|gb|EJZ77657.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
Length = 855
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
T + +++A +LA + + + P+H+ +L ST + TA + PL
Sbjct: 6 FTTKFQQALQEAQSLAIGKDNQFIEPVHLLTALLNQQGGSTAPILTAS--GANLPL---- 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L N L++LP + + GG Q ++ N L K AQ Q +
Sbjct: 60 LRNELNAELSKLPQVSGS---GGDVQVSRSLVNLLNLCDKLAQQRQDKF----------- 105
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E +++ L+D ++ V+++ G ++ +E+ + + S ++ E
Sbjct: 106 --ISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQALEKY 163
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L+ A + K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 TIDLTARAESGK-------LDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVE 216
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 217 GLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILF 275
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + + ++N + + R+G R G F
Sbjct: 547 VAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSF------ 600
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F N V I +S F + S
Sbjct: 601 ------LFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVG 654
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + + ++ GR+ G V +
Sbjct: 655 YEEGGYL---TEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNT 711
Query: 775 IVILS 779
+VI++
Sbjct: 712 VVIMT 716
>gi|415714012|ref|ZP_11465392.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1400E]
gi|388059370|gb|EIK82110.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1400E]
Length = 864
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 30/301 (9%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ G+AQV LH+A+ +L G++R Q+ + Q
Sbjct: 1 MEQKFTTLAQDALSDAVQSTAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LP+ST G P S L+AA +A+ R E
Sbjct: 61 A---EIRNALVALPSST-----GSTTTKPDASRQLLAALSQAEKEMRAMGDEY------- 105
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++I ++ +V+ + ++ S+ ++ V V+S + E
Sbjct: 106 --VSTEHMLIGMVASAPNAVADIFKKHNVSADALRKAVP------TVRGGAKVTSPDA-E 156
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
N L + + LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 157 GNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + + L ++S + R E E+R++ + ++ G+ I
Sbjct: 217 VEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIIT 276
Query: 302 L 302
Sbjct: 277 F 277
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ L K+V Q + + IA+ V + R+G R G F
Sbjct: 554 VGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 608 ------LFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIG------- 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A + ++ GR+ G V
Sbjct: 655 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTV 713
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 714 DFTNTILIMTS 724
>gi|262273641|ref|ZP_06051454.1| ClpB protein [Grimontia hollisae CIP 101886]
gi|262222056|gb|EEY73368.1| ClpB protein [Grimontia hollisae CIP 101886]
Length = 857
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 28/275 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ ++L + +R + Q ++ + L+R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMVSLLNQDSSTIRPLMTLLNVDLTQLRS---SLSEMLDR 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP T T GG Q L + ++ I ++ L AV+
Sbjct: 71 LPKVTGT---GGDVQLSHSMGMLFNMCDKLSQKRKDKYISSELFILAAVE---------- 117
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
+ ++ ++R G ++ +V+ +++ + + + ++ E + L++ A K
Sbjct: 118 -EKGALGELLRSLGLTTKKVEDAIDKIRGGQAINDPNAEEARQALEKFTIDLTEKAEQGK 176
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R+E++ ++ L + K N V++GE +V G+ +I G+VP
Sbjct: 177 -------LDPVIGRDEEIRRTVQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIVNGEVP 229
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
E LR+ + L L + S R E E+R++ + N
Sbjct: 230 EGLRNKRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L +V Q++ V +AN + + R+G R G F
Sbjct: 548 VAKMLEGEKEKLLHMEDELHSRVIGQEEAVTSVANAIRRSRAGLADPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKSLAEFLFDSSDAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +A
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNLLLQVLDDGRLTDGQGRTVDFRNA 712
Query: 775 IVILSCESFSSR 786
+VI++ S R
Sbjct: 713 VVIMTSNLGSDR 724
>gi|345304296|ref|YP_004826198.1| ATP-dependent chaperone ClpB [Rhodothermus marinus SG0.5JP17-172]
gi|345113529|gb|AEN74361.1| ATP-dependent chaperone ClpB [Rhodothermus marinus SG0.5JP17-172]
Length = 880
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 126/267 (47%), Gaps = 27/267 (10%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
Q T +A V++A+ +A ++ H + P H+ +L+ G + L+ L+ L
Sbjct: 4 QKFTVKAQEAVQRALEIAAQKNHQAIEPPHLLKALLSEPQGTA-VSILKRLGASLEL--L 60
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
+ AL +LP + G + + N L F RA A G ++++
Sbjct: 61 NTKTDQALAKLPVVHGASVSGQY-----VGNELKKVFDRALAEA--GLLKDEY------- 106
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+ E L+I++ + + V + +RE G + K N+ + L+ + V+ ++E
Sbjct: 107 VSTEHLLIALAESQTEVGQALREQGAT----KENILKV--LKDVRGAQRVTDPHAEERYE 160
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ T++++ + LDP+ R+E++ V++ L + K N V+VGE +V G
Sbjct: 161 ALQRYGRDLTELAR-QGKLDPVIGRDEEIRRVLQILSRRMKNNPVLVGEAGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF 273
+ +I +GDVPE+L+D + + L + +
Sbjct: 220 LALRIVQGDVPESLKDRRIVALDMGAL 246
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 30/172 (17%)
Query: 618 KKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIA 674
K+V Q + + +AN V + R+G R G F F G K ++A
Sbjct: 569 KRVVGQPEAISAVANAVRRGRAGLQEPNRPIGSF------------IFLGSTGVGKTELA 616
Query: 675 KELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR----DEQSCSYIE--RFAEAV 728
K LA +F N + I +S + R+ SR Y E + EAV
Sbjct: 617 KALAEALFNDENAMIRIDMSEYQ---------ERHSVSRLIGAPPGYVGYEEGGQLTEAV 667
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
P+ V L++++E+A + ++ GR+ + G + I+I++
Sbjct: 668 RRRPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDNKGRTADFRNTIIIMTS 719
>gi|398999530|ref|ZP_10702266.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM18]
gi|398131565|gb|EJM20881.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM18]
Length = 882
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLAKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLERFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|398822258|ref|ZP_10580643.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. YR681]
gi|398227082|gb|EJN13319.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. YR681]
Length = 879
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + ++ A +LA R GH Q + LHV +L + GL A L + +A+
Sbjct: 7 TERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGL--AAGLIDRAGG-NSRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAV 128
+ AL ++P + GG Q P ++ AA K A ++ G S ++ LL +
Sbjct: 64 TDEALGKVPKVSG----GGAGQIYLAPDLARTFDAAEK---AGEKAGDSFVTVERLLLGL 116
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E ++ + G + + + +E +T ++ + +
Sbjct: 117 TLE---------KTSEAGAILSKGGVTPQNLNAAIEALRKGRTADSATAENAYDALKKYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+ +I GDVPE+L+D K L L + S R E E+R++ +
Sbjct: 221 LALRIVNGDVPESLKDKKLLSLDLGSLIAGAKYRGEFEERLKAV 264
>gi|390572032|ref|ZP_10252259.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|420256959|ref|ZP_14759764.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
gi|389936015|gb|EIM97916.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
gi|398042076|gb|EJL35121.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
Length = 865
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + + P+H+ ++A G R+ ++ H +AL+
Sbjct: 6 LTTKFQEALADAQSLAVGHDNQYIEPVHLLAALVAQQDGSARSLLSRAGVH---VQALQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ RLP T G+ Q I L +A + + Q + I
Sbjct: 63 SLADAITRLPQVRGTD---GNVQ---IGRDLTGLLNQA---------DKEAQKINDTYIA 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES---N 187
E +++I DD R+ RE G S +++ + V++ +Q + +E+
Sbjct: 108 SEMFLLAIADDKGEAGRLAREHGLSRKSLEAAI---VAVRGGAQVHSQDAESQREALKKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
+ L++ A A K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 165 TIDLTERARAGK-------LDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I G+VPE L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 218 GLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVF 276
>gi|261338715|ref|ZP_05966599.1| ATP-dependent chaperone protein ClpB [Bifidobacterium gallicum DSM
20093]
gi|270276270|gb|EFA22124.1| ATP-dependent chaperone protein ClpB [Bifidobacterium gallicum DSM
20093]
Length = 907
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 144/368 (39%), Gaps = 43/368 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q LT A + A+ A G+ QV PLH+ + +L G++R + P +
Sbjct: 1 MEQNLTRMAQEALGDALQSAAAAGNPQVDPLHLLDALLRQENGVVRGLIQAVGADPQKIG 60
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A AL LPA++ G P S L A + E
Sbjct: 61 A---QVRNALVALPAAS-----GSSTAQPQASRQLSMTISNADKDMKEFGDE-------- 104
Query: 128 VKIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L++ IL + + ++ G + VK + + + S KS E
Sbjct: 105 -YVSTEMLLLGILQAAPNTAADILTSNGVTEAAVKKAIPEVRGGAKVTSPDAEGSYKSLE 163
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L++ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 164 KFSTNLTERAREGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 216
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVP L++ + L + S + R E E+R++ + + ++ G+ +
Sbjct: 217 VEGLAQRIVAGDVPSTLQNKTLISLDLGSMVAGSKYRGEFEERLKSVLDEIKQSDGQ--I 274
Query: 302 LNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRC 361
+ D A ++E M+ G ++ + L+G T Y
Sbjct: 275 ITFIDELHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYREN 323
Query: 362 KSGHPSLE 369
P+LE
Sbjct: 324 IEKDPALE 331
>gi|222149908|ref|YP_002550865.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
gi|221736890|gb|ACM37853.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
Length = 868
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A GH Q TP HV +L G+ + ++ P K + + + AL +
Sbjct: 14 LQSAQTHALSEGHQQFTPEHVLKVLLDDEQGMASSLISRAGGDP---KEVRIANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP + GG+ Q ++ L F A+ A ++ G S ++ LLA+ +E
Sbjct: 71 LPKVS-----GGNGQV-YLAQPLARVFSTAEDAAKKAGDSFVTVERLLLALAVETS---- 120
Query: 138 SILDDPSVSRVMREAGFSST---QVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQT 194
S S +++ G ++ QV ++V + + + + + K ++ T
Sbjct: 121 -----ASTSASLKKGGVTAAALNQVINDVRKGRTADTANAEQGFDALKKYARDL-----T 170
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
A A + LDP+ R++++ ++ L + K N V++GE + G+ +I
Sbjct: 171 AEAREGR-----LDPVIGRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLAIRIV 225
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
GDVPE+L+D K + L + S R E E+R++ + N V++ G I+
Sbjct: 226 NGDVPESLKDKKLMALDMGSLIAGAKYRGEFEERLKAVLNEVQADNGEIILF 277
>gi|119946869|ref|YP_944549.1| chaperone ClpB [Psychromonas ingrahamii 37]
gi|119865473|gb|ABM04950.1| chaperone ClpB containing ATPase AAA-2 domain [Psychromonas
ingrahamii 37]
Length = 857
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 28/281 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ V A +LA + + P+H+ T+L G LR + AL L
Sbjct: 6 LTSKFQLAVADAQSLALGHDNQYIEPIHIMLTLLNQDGGSLRPIFADLE---VNLSALRL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L+RLP T +GG Q IS L F + ++ Q ++ ++
Sbjct: 63 ELSTELDRLPKVTG---IGGDIQ---ISAQLNTLFNLCDKY-----VQKSQDKFISSEL- 110
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L+ + D + ++++ G + +V+ ++E+ + + + K+ + L
Sbjct: 111 --FLVAACEDKGRLGDILKKFGLNKQKVEKSIEKIRNGQNVTDQDAEGVEKALVKYTIDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R+++V +I+ L + K N V++GE +V G+
Sbjct: 169 TEQAEQGK-------LDPVIGRDDEVRRMIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+I G+VPE L++ + L L + + R E E+R++ +
Sbjct: 222 RIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAV 262
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + L +V Q + + IAN + + R+G R G F
Sbjct: 548 VAKMLEGERDKLLKMETHLHSRVIGQNEAIDAIANAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K + K LA +F S +N V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTESCKALANFLFDSEDNMVRIDMSEFMEKFSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L++++E+A + ++ GR+ G VS +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVSFRNT 712
Query: 775 IVILS 779
++I++
Sbjct: 713 VIIMT 717
>gi|294634722|ref|ZP_06713253.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451966850|ref|ZP_21920100.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
gi|291091852|gb|EFE24413.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
23685]
gi|451314387|dbj|GAC65462.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
Length = 857
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+H+ + ML G +R S + A
Sbjct: 6 LTNKFQLALADAQSLALGRDNQFIEPIHLMSAMLNQDGGTVRPLL---ASAGVDIGAFRQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAF----KRAQAHQRRGSIENQQQPLLA 127
A++RLP T GG Q P SN L+ K AQ H
Sbjct: 63 SLEQAISRLPQVEGT---GGDVQ-P--SNELIRVLNLCDKLAQKHN-------------D 103
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I E I++ +++ ++ +++ AG S+ ++ + +EQ E ++ +
Sbjct: 104 TYISSELFILAAMEERGKLADMLKAAGASAQKLSAAIEQLRGGEKVEDQNAEDQRQALKK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 YTIDLTERAEQGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 217 EGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L K+V Q + V ++N + + R+G R G F
Sbjct: 548 VSRMLEGEREKLLRMEDELHKRVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|87303275|ref|ZP_01086068.1| ATPase [Synechococcus sp. WH 5701]
gi|87282170|gb|EAQ74131.1| ATPase [Synechococcus sp. WH 5701]
Length = 875
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 130 IELEQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I +E L++++ +DD R++ +AG S+ ++K V+ + + P + +S E
Sbjct: 107 ISIEHLLLALAIDDRCGKRLLSQAGTSADKLKDAVQAVRGNQSVTDQNPEGTYESLEKYG 166
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 167 RDLTQAARDGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I GDVP+AL++ + + L + + R E E+R++ + V S G+ IVL +
Sbjct: 220 LAQRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSEGQ-IVLFI 278
Query: 305 GDL 307
++
Sbjct: 279 DEI 281
>gi|149377764|ref|ZP_01895497.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
gi|149357936|gb|EDM46425.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
algicola DG893]
Length = 858
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + + A +LA R H + P+H+ ++ ++ QS + P + +
Sbjct: 6 LTSKLQTALADAQSLAVGRDHNFIEPVHLMQALMDQEGSSIKPLLKQSGAEPSRIRQ--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
A+ R + P + G ++SN + F A + Q+RG
Sbjct: 63 ----AVAR--EIENLPEVQGSAGDVSMSNDMGRLFNIADKLAQKRG-------------- 102
Query: 131 ELEQLIISIL-------DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+Q I S L D S+ RV+RE G + ++ +++ E ++ + ++
Sbjct: 103 --DQFISSELLLLAALEDRGSLGRVLREQGVDKSALERAIDEIRGGESVDDASAEENRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
+ L++ A A K LDP+ R++++ I+ L +RK N V++GE
Sbjct: 161 LSKYAIDLTERAEAGK-------LDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + S R E E+R++ + N
Sbjct: 214 AIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKSVLN 264
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E + L + AL +V Q + V ++N V + R+G R G F
Sbjct: 548 VSKMLEGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPHRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|110005505|emb|CAK99827.1| putative atpase with chaperone activity, clp protease subunit
protein [Spiroplasma citri]
Length = 606
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V ++E+N E L ++ L+K+V Q + + N V K +G G + K +
Sbjct: 282 VSPWEEMNYEKLATIEKELKKRVIGQDHAIEKVKNVVYKAFTGL---SGVQYSSNRTKPK 338
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
LFF G K ++AK LA+ +FG N + +S ++ +D +
Sbjct: 339 GTLFFVGPTGVGKTELAKALAKFLFGDEKNCIRFDMSEYNQEASD-----QKLIGAPPGY 393
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + A+ P V L +++E+A F + +E GR+ + G V+ D+
Sbjct: 394 VGYEEGGQLTNAIKEKPFSVLLFDEIEKAHPRILDKFLQILEDGRLTDNKGQTVAFSDSF 453
Query: 776 VILS 779
+I +
Sbjct: 454 IIFT 457
>gi|419404243|ref|ZP_13944960.1| ATPase associated with various cellular activities family protein
[Escherichia coli DEC15C]
gi|378243060|gb|EHY03007.1| ATPase associated with various cellular activities family protein
[Escherichia coli DEC15C]
Length = 399
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 610 TSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADA 669
+ L LE++V Q+ + IA+ VL CR+ KD VK + G
Sbjct: 90 SGLLRCLEQRVLGQRYAMSAIASQVLICRA-------DLKD--PVKPDGVFLLAGPSGTG 140
Query: 670 KEKIAKELARLVFGSHNNFVSIALSSFSSTRADST-EDSRNKRSRDEQSCSYIERFAEAV 728
K + A+ LA V+G N ++I ++ F ST + + Q + ER V
Sbjct: 141 KTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTER----V 196
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
S+NP+ V L++++E+A + F + +SG I + G VS D ++I++
Sbjct: 197 SHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMT 247
>gi|337749338|ref|YP_004643500.1| protein ClpE [Paenibacillus mucilaginosus KNP414]
gi|336300527|gb|AEI43630.1| ClpE [Paenibacillus mucilaginosus KNP414]
Length = 712
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K ++ + L L LE KV Q + V +A V + R+G + K
Sbjct: 400 VGKLQQDEAAKLKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPKN---------KPI 450
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE-DSRNKRSRDEQ 716
F G K +++K LA +FG + + + +S + + S S E+
Sbjct: 451 ASFLFIGPTGVGKTELSKSLAEELFGHADAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEE 510
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
+ ER V NP+ + L++++E+A Q F + +E GR+ S G VS D ++
Sbjct: 511 AGQLTER----VRRNPYSIILLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTVSFKDTVI 566
Query: 777 ILS 779
I++
Sbjct: 567 IMT 569
>gi|310823094|ref|YP_003955452.1| ATP-dependent chaperone protein clpb [Stigmatella aurantiaca
DW4/3-1]
gi|309396166|gb|ADO73625.1| ATP-dependent chaperone protein ClpB [Stigmatella aurantiaca
DW4/3-1]
Length = 876
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 33/296 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A + + LARR + P H+A +L G++ + + K
Sbjct: 7 TVKAQEAIHEGQALARRADNPSYEPEHLAAALLEQKDGIVEPVLRKIGA---DSKLFAAR 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL ++P M GG +S L+ F +A E++ + L I
Sbjct: 64 LGEALGKIPR-----MQGGESAL--LSQRLLKTFDKA---------EDEAKGLKDEFISS 107
Query: 133 EQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLV 190
E L++++ D +V V++ +G + +V S ++ S + SQ S+ ++ E
Sbjct: 108 EHLLLALTHDKGTVGEVLKSSGVTRDRVLSGLKDVRGSARVTSQDAE-STYQALEKYGRD 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ +A + K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 167 LTDSARSGK-------LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L++ + + L + S R E E+R++ + V G I+
Sbjct: 220 RRIVDGDVPESLKNKRLITLDLGSMVAGAKYRGEFEERLKAVLKEVADAAGEIILF 275
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + L +V Q + ++N V + RSG R G F
Sbjct: 550 VSKLLEGEVQKLVKMEDRLSNRVIGQHSAIEAVSNAVRRARSGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR--ADSTEDSRNKRS 712
F G K + AK LA +F ++ + I +S + A
Sbjct: 604 ------IFLGPTGVGKTETAKALAEFLFDDDSSMIRIDMSEYMEKHSVARLVGAPPGYVG 657
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EAV P+ V L +++E+A + + ++ GR+ S G V
Sbjct: 658 YDEGG-----QLTEAVRRRPYSVILFDEIEKAHHDVFNILLQILDEGRLTDSQGRTVDFK 712
Query: 773 DAIVILSC 780
+ ++IL+
Sbjct: 713 NTVLILTS 720
>gi|292670603|ref|ZP_06604029.1| chaperone protein ClpB [Selenomonas noxia ATCC 43541]
gi|292647769|gb|EFF65741.1| chaperone protein ClpB [Selenomonas noxia ATCC 43541]
Length = 863
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 39/299 (13%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACL 57
M G Q TA + ++ A +A R H ++T HV + GLL T C
Sbjct: 1 MVEGHIMEQDKYTARTLAALQSAQQIAAMRYHQEITSAHVLLALAKEPEGLLATIFAVC- 59
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
+ L+ + R+P+ T LG + +V RA+ + S
Sbjct: 60 -----GVDLPMLKARLEKEIARIPSVRGTNRLG-------MGMDMVRVLGRAEELAK--S 105
Query: 118 IENQQQPLLAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQS 175
++++ + E L+++I+ D S V + RE G + + V+ +++ + S +
Sbjct: 106 MKDEY-------VSTEHLLLAIITDGSDEVQTIAREFGLTKSAVQEAIQKNRKQNVTSDN 158
Query: 176 TPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVV 233
P +S E L+ A A K LDP+ R+E++ IE L + K N V++
Sbjct: 159 -PEEGYQSLEKYGRDLTAAARANK-------LDPVIGRDEEIRRSIEILSRRTKNNPVLI 210
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
GE +V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 211 GEPGVGKTAIVEGLARRIVAGDVPESLKNKTLYSLDMGALVAGAKFRGEFEERLKGVLN 269
>gi|406597401|ref|YP_006748531.1| ClpB protein [Alteromonas macleodii ATCC 27126]
gi|407684414|ref|YP_006799588.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
gi|407688343|ref|YP_006803516.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|406374722|gb|AFS37977.1| ClpB protein [Alteromonas macleodii ATCC 27126]
gi|407246025|gb|AFT75211.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
gi|407291723|gb|AFT96035.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 858
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 28/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ ML G +R Q++ + AL + A+ R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQAN---INVNALRSALSQAIER 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP +GG Q S L+ + A QR+ + +LA ++
Sbjct: 71 LPRIEG---IGGDVQLSKDSGILLNLCDKI-AQQRKDEYITSEIFVLA----------AL 116
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
D + +++ + ++S ++ + + ++ E L++ A K
Sbjct: 117 QDKGRLGEILKSLNITKEAIESAIDDMRGGQKVTDPNAEDVRQALEKYTTDLTERAEQGK 176
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ ++ L + K N V++GE +V G+ +I G+VP
Sbjct: 177 -------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 230 EGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILF 276
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L K+V Q++ V ++N + + R+G R G F
Sbjct: 548 VARMLEGEREKLLRMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|308370390|ref|ZP_07421333.2| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu003]
gi|308375144|ref|ZP_07442858.2| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu007]
gi|385989889|ref|YP_005908187.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis CCDC5180]
gi|422811307|ref|ZP_16859710.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium
tuberculosis CDC1551A]
gi|424946164|ref|ZP_18361860.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis
NCGM2209]
gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis]
gi|308332178|gb|EFP21029.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu003]
gi|308347335|gb|EFP36186.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu007]
gi|323721237|gb|EGB30297.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium
tuberculosis CDC1551A]
gi|339297082|gb|AEJ49192.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis CCDC5180]
gi|358230679|dbj|GAA44171.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis
NCGM2209]
Length = 877
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 117/611 (19%), Positives = 221/611 (36%), Gaps = 104/611 (17%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD
Sbjct: 206 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 265
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
+ L + S + R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 266 IVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA-- 322
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSL 368
M+ G ++ + L+G T Y + G PS+
Sbjct: 323 ---------MDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSV 373
Query: 369 ETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLF 413
E + H + I +L + +D + ++ KA + S L
Sbjct: 374 EDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRM 433
Query: 414 EGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
E + ++ + E E +L S D ++ A L+ ++K L+
Sbjct: 434 EIDSRPVEIDEVERLVRRLEIEEMAL---SKEEDEASAERLAKLRSELADQKEKLA---- 486
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHR 530
+L +W + N+I E+ S + G + + +Y + +
Sbjct: 487 -----ELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEK 541
Query: 531 DWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSS 590
P+ RE L D S IP + L+ ++
Sbjct: 542 KLDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETA 588
Query: 591 DIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD 650
++ ME + L K+V QK V +++ V + R+G
Sbjct: 589 KLLRME-----------------DELGKRVIGQKAAVTAVSDAVRRSRAGV--------- 622
Query: 651 HSEVKEETWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
S+ T F F G K ++AK LA +F V I +S + +
Sbjct: 623 -SDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAP 681
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
++ + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 682 PGYVGYEAGG---QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTV 738
Query: 770 SLGDAIVILSC 780
+ I+IL+
Sbjct: 739 DFRNTILILTS 749
>gi|407700657|ref|YP_006825444.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407249804|gb|AFT78989.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 858
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 28/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ ML G +R Q++ + AL + A+ R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQAN---INVNALRSALSQAIER 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP +GG Q S L+ + A QR+ + +LA ++
Sbjct: 71 LPRIEG---IGGDVQLSKDSGILLNLCDKI-AQQRKDEYITSEIFVLA----------AL 116
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
D + +++ + ++S ++ + + ++ E L++ A K
Sbjct: 117 QDKGRLGEILKSLNITKEAIESAIDDMRGGQKVTDPNAEDVRQALEKYTTDLTERAEQGK 176
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ ++ L + K N V++GE +V G+ +I G+VP
Sbjct: 177 -------LDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 230 EGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILF 276
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + + L K+V Q++ V ++N + + R+G R G F
Sbjct: 548 VARMLEGEREKLLRMEDVLHKRVVGQEEAVQAVSNAIRRSRAGLADPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|320530248|ref|ZP_08031318.1| ATP-dependent chaperone protein ClpB [Selenomonas artemidis F0399]
gi|320137681|gb|EFW29593.1| ATP-dependent chaperone protein ClpB [Selenomonas artemidis F0399]
Length = 857
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACLQSHSHPLQ 65
Q TA + ++ A +A R H ++T HV + GLL T C +
Sbjct: 3 QDKYTARTLAALQSAQQIAAMRYHQEITSAHVLLALAKEPEGLLATIFSVC------GVD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
L+ L +PA T LG + +V RA E Q +
Sbjct: 57 LPMLKARLEKELASIPAVRGTNRLG-------MGMDMVRVLGRA---------EELAQSM 100
Query: 126 LAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L+++++ D S V ++ RE G + + V+ +++ + S + P +S
Sbjct: 101 KDEYVSTEHLLLALITDGSDEVQKIAREFGLTKSSVQDAIKKNRKQNVTSDN-PEEGYQS 159
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E ++ A A K LDP+ R+E++ IE L + K N V++GE
Sbjct: 160 LEKYGRDMTAAARANK-------LDPVIGRDEEIRRTIEILSRRTKNNPVLIGEPGVGKT 212
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 213 AIVEGLARRIVAGDVPESLKNKTLYALDMGALVAGAKFRGEFEERLKGVLN 263
>gi|323143510|ref|ZP_08078190.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
gi|322416704|gb|EFY07358.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
12066]
Length = 864
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 28/295 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
TA+ + A +LA R + + P+H+ + ++A G +R + S P KA+ L
Sbjct: 6 FTAKFQQALADAQSLAVGRDNQFIEPIHILSALIAQEDGSVRPLLTLAGSDP---KAVSL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
A+ +LP +GG Q S ++ + I ++ L A +
Sbjct: 63 LLKEAIEKLPQVEG---VGGDIQLSQQSAKVLNLCDKFAQKNNDAYISSELFVLAAFE-- 117
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
D V ++ + + ++ +E + + + S+ + + + L
Sbjct: 118 ---------GDGEVKNILEKCNVTREKILKALETVRAGQNVNDENAESTRGALKKYTIDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R+E++ ++ L + K N V++GE +V G+
Sbjct: 169 TERAEKGK-------LDPVIGRDEEIRRTMQILQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I KG+VPE LR+ K L L + + R E E+R++ + N + G+ I+
Sbjct: 222 RIIKGEVPEGLRNKKVLSLDMGALIAGAKYRGEFEERLKGVLNELAKLEGKVILF 276
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 26/229 (11%)
Query: 560 PSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY------VHKFKELNSENLTSLC 613
PSL I E D P + N + +I E+ V K E L +
Sbjct: 507 PSLEKQIKEAGD--APAEKSFQLLKNKVTDVEIAEVVSKATGIPVAKMLEGERAKLLHME 564
Query: 614 NALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAK 670
+ L ++V Q + + IAN++ + R+G R G F F G K
Sbjct: 565 DNLHQRVIGQDEAINAIANSIRRSRAGLSDPNRPIGSF------------MFMGPTGVGK 612
Query: 671 EKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSN 730
++ K +A +F + V I +S F + S + Y+ EAV
Sbjct: 613 TELCKAVAEFLFDTEKAMVRIDMSEFMEKFSVSRLVGAPPGYVGYEQGGYL---TEAVRR 669
Query: 731 NPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
P+ V L++++E+A + ++ GR+ G V + ++I++
Sbjct: 670 RPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMT 718
>gi|395499223|ref|ZP_10430802.1| type VI secretion ATPase, ClpV1 family protein [Pseudomonas sp.
PAMC 25886]
Length = 878
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 37/144 (25%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DPI R+E++ VI+ LM +R+ N ++VGE VV G +I +GDVP +LRDV+
Sbjct: 205 MDPIVGRDEEIRQVIDILMRRRQNNPILVGEAGVGKTAVVEGFAQRIARGDVPPSLRDVQ 264
Query: 265 CLPLSISSFRHMNRV--EVEQR----VEEIK----------------------------- 289
L L + + + E EQR ++E++
Sbjct: 265 LLALDVGLLQAGASMKGEFEQRLRSVIDEVQASVKPVVLFIDETHTLVGAGGAAGTGDAA 324
Query: 290 NLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G +AE++
Sbjct: 325 NLLKPALARGTLRTVGATTFAEYK 348
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 13/188 (6%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
EN+ L + L +++ Q + IA + R+G + K G
Sbjct: 569 ENVLRLADRLSQRIIGQNHALEMIARRIQTSRAGL---------DNPGKPVGVFMLAGTS 619
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAE 726
K + A LA ++G N ++I +S + ST + E
Sbjct: 620 GVGKTETALALAESLYGGEQNVITINMSEYQEAHTVSTLKGAPPGYVGYGEGGVL---TE 676
Query: 727 AVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSR 786
AV P+ V L+++VE+A + F + + G + G + + +++L+ + ++
Sbjct: 677 AVRRKPYSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRIIDFKNTLILLTTNAGTAL 736
Query: 787 -SRACSPP 793
SR C P
Sbjct: 737 ISRLCRDP 744
>gi|359403051|ref|ZP_09195958.1| ATPase AAA-2 domain-containing protein [Spiroplasma melliferum KC3]
gi|357968268|gb|EHJ90777.1| ATPase AAA-2 domain-containing protein [Spiroplasma melliferum KC3]
Length = 606
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V ++E+N E L ++ L+K+V Q + + N V K +G G K +
Sbjct: 282 VSPWEEMNYEKLATIEKELKKRVIGQDHAIEKVKNVVYKAFTGL---SGVQYSSKRTKPK 338
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
LFF G K ++AK LA+ +FG N + +S ++ +D +
Sbjct: 339 GTLFFVGPTGVGKTELAKALAKFLFGDEKNCIRFDMSEYNQEASD-----QKLIGAPPGY 393
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + A+ P V L +++E+A F + +E GR+ + G V+ D+
Sbjct: 394 VGYEEGGQLTNAIKEKPFSVLLFDEIEKAHPRILDKFLQILEDGRLTDNKGQTVAFSDSF 453
Query: 776 VILS 779
+I +
Sbjct: 454 IIFT 457
>gi|337288558|ref|YP_004628030.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium sp. OPB45]
gi|334902296|gb|AEH23102.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium geofontis
OPF15]
Length = 872
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A LA H Q+ P H+ ++ G++ T + K +
Sbjct: 6 FTFKAQEALQSAQRLAETYNHPQIEPEHLLKALVDQEGGIVPTIL---DRLGVNSKIISS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L + P T G Q IS +L +A++ + E I
Sbjct: 63 DLDEILEKFPKLTY-----GTYQL-YISLSLKQILDKAESLAKEMRDEY---------IS 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L +SI+D P+ ++R+ G + + K + + + + P ++ E
Sbjct: 108 TEHLFLSIIDSPTRAGEILRKRGITFSNAKDVITKIRKGQRITDQNPEEKYQALEKFGRD 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A A K LDP+ R+E++ V+ L + K N V+VGE +V G+
Sbjct: 168 LTALAKAGK-------LDPVIGRDEEIRRVMHILSRRTKNNPVLVGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE L+D + + L + + R E E+R++ + +++ G I+
Sbjct: 221 QRIVAGDVPEVLKDKRIIQLDLGALIAGTKFRGEFEERLKAVLREIQASEGEIILF 276
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
VH+ E E L + L+++V Q + IAN + + R+G R G F
Sbjct: 551 VHRLLESEREKLLRIEERLKERVVGQDHAISAIANALRRARAGLKDPRRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + + + I ++ + + S
Sbjct: 605 ------LFIGPTGVGKTELAKALAEFMFDTEDAMIRIDMTEYMEKHSVS-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 654 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDGKGRTVDFK 713
Query: 773 DAIVILSC 780
+ I+I++
Sbjct: 714 NTIIIMTS 721
>gi|237836491|ref|XP_002367543.1| heat shock protein, putative [Toxoplasma gondii ME49]
gi|211965207|gb|EEB00403.1| heat shock protein, putative [Toxoplasma gondii ME49]
Length = 983
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V+K E + + L SL +L+ +V Q++ V +AN +++ R+G RR
Sbjct: 578 VNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIG-------- 629
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS--TRADSTEDSRNKRSRDE 715
T+LF G K ++AK L +F N + + +S +S T A S DE
Sbjct: 630 TFLFL-GSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHDE 688
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV PH V L +++E A + ++ GR+ G V + +
Sbjct: 689 GG-----QLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCV 743
Query: 776 VI 777
+I
Sbjct: 744 II 745
>gi|221505303|gb|EEE30957.1| heat shock protein, putative [Toxoplasma gondii VEG]
Length = 983
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V+K E + + L SL +L+ +V Q++ V +AN +++ R+G RR
Sbjct: 578 VNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIG-------- 629
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS--TRADSTEDSRNKRSRDE 715
T+LF G K ++AK L +F N + + +S +S T A S DE
Sbjct: 630 TFLFL-GSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHDE 688
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV PH V L +++E A + ++ GR+ G V + +
Sbjct: 689 GG-----QLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCV 743
Query: 776 VI 777
+I
Sbjct: 744 II 745
>gi|153807767|ref|ZP_01960435.1| hypothetical protein BACCAC_02050 [Bacteroides caccae ATCC 43185]
gi|149129376|gb|EDM20590.1| ATP-dependent chaperone protein ClpB [Bacteroides caccae ATCC
43185]
Length = 862
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ +++A+ L + RG + P+H+ ++ + + + + +
Sbjct: 6 FTIKSQEAIQEAVNLVKSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSREANDVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHILLALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|334143474|ref|YP_004536630.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
gi|333964385|gb|AEG31151.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
Length = 853
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 115/264 (43%), Gaps = 30/264 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ S + QA +LA + + + P+H+ +++L LLR A + L
Sbjct: 4 FTSQFQSALAQAQSLANSQDNQFIEPVHILSSLLPDQGHLLRLAGVD-------VNGLNQ 56
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L LP + GG Q + A++ ++ QA Q+ G + +E
Sbjct: 57 AVQAKLKTLPQVSGA---GGDVQISRQTGAILNLMEK-QA-QKNGDAYISSELFFQAALE 111
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ V+ ++++AG + +++ ++Q E S+ ++ + + L
Sbjct: 112 SKD---------QVADLLKQAGTTESRLAQAIQQVRGGESVQDQNAESTRQALKKYTIDL 162
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 163 TSRAESGK-------LDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 215
Query: 250 KIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE LR+ + L L + +
Sbjct: 216 RIINGEVPEGLRNKRVLSLDLGAL 239
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E E L + +L KV Q + V +++ + + R+G D + K
Sbjct: 545 VSRMMEGEREKLLRMEESLSAKVVGQDEAVKAVSDAIRRSRAG-------LSDPN--KPN 595
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V + +S F + + +
Sbjct: 596 GSFLFLGPTGVGKTELTKSLADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQ 655
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G + + +++
Sbjct: 656 GGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVIV 712
Query: 778 LSC 780
++
Sbjct: 713 MTS 715
>gi|221484032|gb|EEE22336.1| heat shock protein, putative [Toxoplasma gondii GT1]
Length = 983
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V+K E + + L SL +L+ +V Q++ V +AN +++ R+G RR
Sbjct: 578 VNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIG-------- 629
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS--TRADSTEDSRNKRSRDE 715
T+LF G K ++AK L +F N + + +S +S T A S DE
Sbjct: 630 TFLFL-GSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHDE 688
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV PH V L +++E A + ++ GR+ G V + +
Sbjct: 689 GG-----QLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCV 743
Query: 776 VI 777
+I
Sbjct: 744 II 745
>gi|423217588|ref|ZP_17204084.1| chaperone ClpB [Bacteroides caccae CL03T12C61]
gi|392628747|gb|EIY22773.1| chaperone ClpB [Bacteroides caccae CL03T12C61]
Length = 862
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ +++A+ L + RG + P+H+ ++ + + + + +
Sbjct: 6 FTIKSQEAIQEAVNLVKSRGQQAIEPVHIMQGVMKVGENVTNFIF---QKLGMNGQQVAV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSREANDVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHILLALLTVKSTVSTILKDAGMTEKELRNAISELRKGEKVTSQSSEDTYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
>gi|296284569|ref|ZP_06862567.1| ATP-dependent Clp protease [Citromicrobium bathyomarinum JL354]
Length = 859
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 134/304 (44%), Gaps = 39/304 (12%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
+ T A ++ A T A R H ++TPLH+ +L S G+ ++ P++
Sbjct: 4 ENFTDRAKGFLQSAQTTAIRLNHQRITPLHILKVLLDDSEGMAAGLVQRAGGDPVKA--- 60
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLA 127
E + L R+PA + + G P + N V +AQ A + S ++ L+A
Sbjct: 61 EQRVDDELGRIPAVSGS----GAQASPGLDNDSVRVLDQAQQIAEKSGDSFVTVERLLVA 116
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+++ + V+ +AG + +E+A++ ++ T S+N + +
Sbjct: 117 ---------LALASNSKAGGVLADAGVDA----KALERAIA-DLRGGRTADSANAEQAYD 162
Query: 188 VLV-----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ L+Q A K LDP+ R+E++ ++ L + K N ++GE
Sbjct: 163 AMQKYARDLTQAARDGK-------LDPVIGRDEEIRRTVQILARRTKNNPALIGEPGTGK 215
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ G+ +I GDVP++L++ + L + + R E E+R++ + + V+ G+
Sbjct: 216 TAIAEGLALRIANGDVPDSLKNRTLMALDMGALIAGAKYRGEFEERLKAVLDEVKGSDGQ 275
Query: 299 GIVL 302
I+
Sbjct: 276 IILF 279
>gi|226881149|gb|ACO90024.1| ClpB [Psychromonas arctica]
Length = 858
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 32/283 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + A ++A R H + HV ML G +R+ + L
Sbjct: 6 LTSKFQLALSDAQSIALGRDHQYIEATHVLLAMLNQDGGAMRSIL---SDLEININLLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
+ L+RLP + +GG Q + + N K AQ + + I
Sbjct: 63 QLSTILDRLPKVSG---IGGEIQVSSQLGNTFNLCDKYAQKAKDK-------------FI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E ++++ +D + +V+ + G + ++V+S++++ + + ++ E +
Sbjct: 107 SSEIFLVAVCEDKGELGQVLNKLGLTKSKVESSLKKIRQGQTVTDVNGDGPEQALEKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A+A K LDP+ R+++V +++ L + K N V++GE +V G+
Sbjct: 167 DLTERAAAGK-------LDPVIGRDDEVRRIVQVLQRRTKNNPVIIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+I G+VPE L+ + L L + S R E E+R++ +
Sbjct: 220 AQRIINGEVPEGLKGKRVLSLDMGSLIAGAKYRGEFEERLKAV 262
>gi|438118217|ref|ZP_20871290.1| ATPase AAA-2 domain-containing protein [Spiroplasma melliferum
IPMB4A]
gi|434155868|gb|ELL44781.1| ATPase AAA-2 domain-containing protein [Spiroplasma melliferum
IPMB4A]
Length = 606
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V ++E+N E L ++ L+K+V Q + + N V K +G G K +
Sbjct: 282 VSPWEEMNYEKLATIEKELKKRVIGQDHAIEKVKNVVYKAFTGL---SGVQYSSKRTKPK 338
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
LFF G K ++AK LA+ +FG N + +S ++ +D +
Sbjct: 339 GTLFFVGPTGVGKTELAKALAKFLFGDEKNCIRFDMSEYNQEASD-----QKLIGAPPGY 393
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + A+ P V L +++E+A F + +E GR+ + G V+ D+
Sbjct: 394 VGYEEGGQLTNAIKEKPFSVLLFDEIEKAHPRILDKFLQILEDGRLTDNKGQTVAFSDSF 453
Query: 776 VILS 779
+I +
Sbjct: 454 IIFT 457
>gi|345877587|ref|ZP_08829330.1| dephospho-CoA kinase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225410|gb|EGV51770.1| dephospho-CoA kinase [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 645
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 40/289 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + A +LA R H + PLH+ + +L G +R Q+ ++
Sbjct: 6 LTSKFQMALADAQSLAVGRDHQFIEPLHLMSALLDQEGGTVRHLLAQA----------DV 55
Query: 72 CFNVALNRLPASTS-TPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK- 129
N+ + L A+T P + G ISN L G + NQ L +
Sbjct: 56 NINLLRSDLSAATERLPSVEGAAGDLHISNDL-------------GRLLNQTDKLAQQRK 102
Query: 130 ---IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
I E +++ +DD + ++R+AG + V+ +++ + ++ E
Sbjct: 103 DQYISSELFVLAAVDDKGELGEILRKAGANKRAVEQVIDKVRGGQSVDDPNAEDQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTIDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
V G+ +I G+VPE L+ + L L + + R E E+R++ + N
Sbjct: 216 VEGLAQRIINGEVPEGLKSKRLLSLDMGALIAGAKFRGEFEERLKGVLN 264
>gi|168186858|ref|ZP_02621493.1| ATP-dependent chaperone ClpB [Clostridium botulinum C str. Eklund]
gi|169295215|gb|EDS77348.1| ATP-dependent chaperone ClpB [Clostridium botulinum C str. Eklund]
Length = 866
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E E L L + L K+V Q + ++N V++ R+G KD E +
Sbjct: 555 VTRLVEGEKEKLLRLEDELRKRVIGQDEATVAVSNAVIRARAG-------LKD--ERRPI 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 606 GSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVS-----RLVGPPPGY 660
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV NP+ V L +++E+A+ F + ++ GR+ + G V + I
Sbjct: 661 VGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQILDDGRLTDNKGKTVDFKNTI 720
Query: 776 VILSCESFSS 785
+I++ SS
Sbjct: 721 IIMTSNLGSS 730
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ I L + K N V++GE +V G+ ++I +GDVPE L++
Sbjct: 182 LDPVIGRDEEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKEKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V+S G+ I+
Sbjct: 242 IFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGKIILF 281
>gi|288928570|ref|ZP_06422417.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 317
str. F0108]
gi|288331404|gb|EFC69988.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 317
str. F0108]
Length = 862
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 32/265 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A V++A+ +A+R G + P+H+ +L + + + + +Q L
Sbjct: 7 TIKAQETVQEAVNIAQRAGQQSIEPVHLLKALLEKAADVTNYIFQKLGVNAMQVSTLA-- 64
Query: 73 FNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N + LP + P L +N L+ A E+ + L +
Sbjct: 65 -NSEVEHLPRVADGNPYLSNEA-----NNVLLKA-------------EDLSKSLGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L +++L + S +R++++AG + ++ ++E Q V S +S + N
Sbjct: 106 VEPLFLALLAVNSSAARILKDAGCTEKDART------AIEALRQGQQVKS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R++++ V++ L + K N +++GE +V G+
Sbjct: 159 LEKYAKNLVEDARNGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAL 243
>gi|323138800|ref|ZP_08073864.1| ATP-dependent chaperone ClpB [Methylocystis sp. ATCC 49242]
gi|322395948|gb|EFX98485.1| ATP-dependent chaperone ClpB [Methylocystis sp. ATCC 49242]
Length = 875
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 36/299 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A +LA R GH Q TP H+ +L S GL+ A S + +A
Sbjct: 7 TERARGFVQSAQSLATREGHQQFTPEHLLKVLLDDEQGLSAGLIDRAGGNSREALAKTEA 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQA-HQRRGSIENQQQPLLA 127
AL +LP ++G ++ A F A+ Q+ G
Sbjct: 67 -------ALAKLP-----KVMGSGAGQLYLAPATARLFDNAEKIAQKAGDS--------Y 106
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
V +E L +++ D ++++ AG + + + +E ++ ++ + +
Sbjct: 107 VTVERLLLALALEKDAESAKILAAAGVTPQTLNAAIEDLRKGRTADSASAENAYDALKKY 166
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L++ A K LDP+ R+E++ ++ L + K N V++GE +V
Sbjct: 167 ARDLTEAAREGK-------LDPVIGRDEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIVE 219
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+L D K L L + + R E E+R++ + N + + G+ I+
Sbjct: 220 GLALRIVNGDVPESLEDKKLLALDMGALIAGAKYRGEFEERLKAVLNEITAAEGKIILF 278
>gi|304390646|ref|ZP_07372599.1| chaperone protein ClpB [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304326402|gb|EFL93647.1| chaperone protein ClpB [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 918
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 128/295 (43%), Gaps = 36/295 (12%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQ 65
++ Q T ++ + A+ A G+A + P+H+ + +L G+ + S
Sbjct: 2 ISMDQKFTTKSQEALATALRTAGAAGNAMLEPIHLLSALLEDREGI----AFEVLSSVAD 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQP 124
A+ L LP +T G P S A++ A A Q RG
Sbjct: 58 ADAIGREVRRELASLPGAT-----GESVAEPQPSQAMLNVISAAGAKAQERGDD------ 106
Query: 125 LLAVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L++ + ++ V +++R+AG + +++ +++ + P ++ K+
Sbjct: 107 ----YVSTEHLLLGLAENEGRVGKILRDAGANDKKLRQAIKKIRGDAKVTSPNPEATFKA 162
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L+Q A K LDP+ R+ ++ VI+ L + K N V++GE
Sbjct: 163 LEKYGDDLTQRAMDGK-------LDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKT 215
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQR----VEEIKN 290
VV G+ +I GDVP++L+ + L +++ R + E+R +EEIKN
Sbjct: 216 AVVEGLAQRIVAGDVPDSLKHKHLIALDLAAMVAGAQYRGQFEERLKAVLEEIKN 270
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K SE L + L +++ QKD V ++N V + R+G R G F
Sbjct: 585 VGKLLRGESEKLLHMEEYLGQRLIGQKDAVRAVSNAVRRARAGVSDPNRPTGSF------ 638
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F I +S + + +
Sbjct: 639 ------LFLGPTGVGKTELAKALADFLFDDEKALTRIDMSEYGEKHSVA-----RLIGAP 687
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G V
Sbjct: 688 PGYVGYEEGGQLTEAVRRRPYGVVLLDEVEKAHPDVYDILLQVLDDGRLTDGQGRTVDFR 747
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 748 NVILVLTS 755
>gi|295397341|ref|ZP_06807433.1| chaperone protein ClpB [Aerococcus viridans ATCC 11563]
gi|294974415|gb|EFG50150.1| chaperone protein ClpB [Aerococcus viridans ATCC 11563]
Length = 873
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V+K E E L L + L +V Q + V + N VL+ R+G R G F
Sbjct: 555 VNKLVEGEREKLLHLDDTLHTRVVGQDEAVDSVTNAVLRSRAGVQDPNRPLGSF------ 608
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F S NN V + +S + D N
Sbjct: 609 ------LFLGPTGVGKTELAKALAEAMFDSENNMVRLDMSEYM--------DKINVTRLI 654
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ Y+ + EAV NP+ V L+++VE+A + ++ GR+ S G V
Sbjct: 655 GAAPGYVGYEEGGQLTEAVRRNPYTVVLLDEVEKAHPDVFNILLQILDDGRLTDSQGRIV 714
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 715 DFKNTIIIMTS 725
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
N L+ +P T + G +S L ++AQA E Q LA
Sbjct: 63 LNRELDAVPVVQGTNVQYGQG----LSRGLGELIQKAQARA-----EKQGDEFLAT---- 109
Query: 133 EQLIISILDDPSVSRVMREAGFSSTQVKSN-VEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+++++ L+D + + + + F Q+ + VE+ + E Q V+S K E N L
Sbjct: 110 -EMVLAALNDVAYTDLAK--WFKKHQITAKAVEEKI--EDLRQGDRVTS-KQAEENYEAL 163
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ +DPI R+E++ V+ L K K N V++GE +V G+
Sbjct: 164 EKYGVDLVEQVKAGKMDPIIGRDEEIRDVVRILSRKSKNNPVLIGEPGVGKTAIVEGLAQ 223
Query: 250 KIEKGDVPEALRDVKCLPLS----ISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I K DVP+ L+D L IS ++ R E E+R++ + N V+ GR I+
Sbjct: 224 RIVKKDVPDNLKDKTVFSLDMGALISGAKY--RGEFEERLKAVLNEVKKADGRIILF 278
>gi|375138512|ref|YP_004999161.1| ATP-dependent chaperone ClpB [Mycobacterium rhodesiae NBB3]
gi|359819133|gb|AEV71946.1| ATP-dependent chaperone ClpB [Mycobacterium rhodesiae NBB3]
Length = 848
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 154/796 (19%), Positives = 283/796 (35%), Gaps = 146/796 (18%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ Q+TP H+ +L + G+ P +A L+RLP+++
Sbjct: 25 GNPQITPAHLLMALLTQNDGIAAPLLEAVGVEPATIRAETQRL---LDRLPSAS------ 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISIL-DDPSVSRVM 149
G P ++ +AA A H + E + + E L++ + D ++++
Sbjct: 76 GSSTQPQLAPQSIAAITTA-THL---ATEMDDE-----YVSTEHLLVGLASGDSDTAKLL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
G S ++ + + P S ++ E L+ A K LDP
Sbjct: 127 TGHGASPQALREAFTKVRGSARVTSPDPEGSYQALEKYSTDLTARAREGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD +
Sbjct: 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVVS 239
Query: 268 LSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L + S R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 240 LDMGSMVAGAKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGESA----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSLETL 371
M+ G ++ + L+G T Y + G PS+E
Sbjct: 294 ------MDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDT 347
Query: 372 WSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLFEGE 416
+ H + I +L + +D + S+ KA + S L E +
Sbjct: 348 VGILRGLKDRYEVHHGVRITDSALVSAATLSDRYITSRFLPDKAIDLVDEAASRLRMEID 407
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCN-SDSPTSSLPAWLQQYKNEKKATLSN---ND 472
++ + E E +L + S L A L YK EK A L+ N+
Sbjct: 408 SRPVEVDEVERLVRRLEIEEMALAKEEDDASKERLVKLRAELADYK-EKLAELTTRWQNE 466
Query: 473 KDSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSGFSYDQQYPNFHKTHRDW 532
K + D+ ++ ++ + +ER + AS + +Y + +
Sbjct: 467 KSA--IDVVRELKEQLETLRGEADRAERDGDLAKAS----------ELRYGRIPEIEKKL 514
Query: 533 AVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDI 592
P RE L D S IP + L+ ++ +
Sbjct: 515 DAALPHAEAREGVMLKEEVGPDDIADVVSAWTGIPAGRMLE-------------GETAKL 561
Query: 593 MEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFK 649
+ ME + L K+V QK V +++ V + R+G R G F
Sbjct: 562 LRME-----------------DELGKRVVGQKKAVQAVSDAVRRSRAGVADPNRPTGSF- 603
Query: 650 DHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
F G K ++AK LA +F V I +S + + +
Sbjct: 604 -----------MFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVG-- 650
Query: 710 KRSRDEQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTS 764
YI + EAV P+ V L +++E+A ++ GR+
Sbjct: 651 ------APPGYIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLAVLDEGRLTDG 704
Query: 765 SGDEVSLGDAIVILSC 780
G V + I++L+
Sbjct: 705 QGRTVDFRNTILVLTS 720
>gi|306796119|ref|ZP_07434421.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu006]
gi|308343443|gb|EFP32294.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu006]
Length = 848
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 117/611 (19%), Positives = 221/611 (36%), Gaps = 104/611 (17%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
+ L + S + R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 237 IVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA-- 293
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSL 368
M+ G ++ + L+G T Y + G PS+
Sbjct: 294 ---------MDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSV 344
Query: 369 ETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLF 413
E + H + I +L + +D + ++ KA + S L
Sbjct: 345 EDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRM 404
Query: 414 EGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
E + ++ + E E +L S D ++ A L+ ++K L+
Sbjct: 405 EIDSRPVEIDEVERLVRRLEIEEMAL---SKEEDEASAERLAKLRSELADQKEKLA---- 457
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHR 530
+L +W + N+I E+ S + G + + +Y + +
Sbjct: 458 -----ELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEK 512
Query: 531 DWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSS 590
P+ RE L D S IP + L+ ++
Sbjct: 513 KLDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETA 559
Query: 591 DIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD 650
++ ME + L K+V QK V +++ V + R+G
Sbjct: 560 KLLRME-----------------DELGKRVIGQKAAVTAVSDAVRRSRAGV--------- 593
Query: 651 HSEVKEETWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
S+ T F F G K ++AK LA +F V I +S + +
Sbjct: 594 -SDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAP 652
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
++ + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 653 PGYVGYEAGG---QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTV 709
Query: 770 SLGDAIVILSC 780
+ I+IL+
Sbjct: 710 DFRNTILILTS 720
>gi|298384357|ref|ZP_06993917.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 1_1_14]
gi|298262636|gb|EFI05500.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 1_1_14]
Length = 862
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P H+ + ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPAHILHGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHILLALLTVKSTVSTILKDAGMTEKELRNAINELRKGEKVTSQSSEDNYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L L + L ++V Q + + +A+ V + R+G R G F
Sbjct: 546 VSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSF------ 599
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + I +S + + S
Sbjct: 600 ------IFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVS-----RLVGAP 648
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EA+ P+ V L +++E+A + ++ GR+ + G V+
Sbjct: 649 PGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFK 708
Query: 773 DAIVILSCESFSS 785
+ I+I++ SS
Sbjct: 709 NTIIIMTSNMGSS 721
>gi|87124024|ref|ZP_01079874.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9917]
gi|86168593|gb|EAQ69850.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9917]
Length = 865
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A + + A LA+ R H Q+ H+ +L GL ++ P AL
Sbjct: 8 FTEKAWAAILSAQQLAQSRRHQQLETEHLLLALLE-QNGLASRILEKAGVSP---PALTS 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LN+ A S P + + L F RA + +Q +
Sbjct: 64 AVDTHLNQQAALQSPP------ESVYLGKGLSDLFDRA---------DGLKQTYGDSYLS 108
Query: 132 LEQLIISILDDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++ +DP R++ +AG + +K+ V+ + + P + +S E
Sbjct: 109 IEHLLLALAEDPRCGKRLLSQAGVDAQGLKTAVDAVRGSQKVTDQNPEGTYESLEKYGRD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 169 LTAAARDGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP+AL++ + + L + + R E E+R++ + V + GR IVL
Sbjct: 222 QRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGR-IVL 276
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD-HSEVKE 656
V K + E L L + L ++V Q+ V +A+ + + R+G D H +
Sbjct: 556 VAKLVQSEMEKLLGLEDQLHERVVGQQQAVTAVADAIQRSRAG-------LSDPHRPIA- 607
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
++LF G K +++K LA +F S + V I +S + + S +
Sbjct: 608 -SFLFL-GPTGVGKTELSKALAAQLFDSEDAMVRIDMSEYMEKHSVSRLIGAPPGYVGYE 665
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
+ + EAV P+ V L ++VE+A + ++ GR+ G V +A++
Sbjct: 666 AGG---QLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVL 722
Query: 777 ILSC 780
IL+
Sbjct: 723 ILTS 726
>gi|333371791|ref|ZP_08463732.1| ATP-dependent Clp protease [Desmospora sp. 8437]
gi|332975520|gb|EGK12410.1| ATP-dependent Clp protease [Desmospora sp. 8437]
Length = 722
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K ++ E + L + L ++V Q + V +A + + R+G RKG S
Sbjct: 410 VRKLQKDEQEKMKDLPDRLNRQVIGQAEAVRKVAKAIRRNRAGL--RKGTRPIGS----- 462
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LAR +FG + + + +S + + S +
Sbjct: 463 --FLFVGPTGVGKTELAKTLAREMFGKEDAMIRLDMSEYMEKHSVSKLIGSPPGYVGHEE 520
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ E V P+ + L++++E+A Q F + +E GR+ S G VS D I+I
Sbjct: 521 AG---QLTEQVRRKPYSILLLDEIEKAHPDVQHLFLQIMEDGRLTDSQGRTVSFRDTILI 577
Query: 778 LS 779
++
Sbjct: 578 MT 579
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS ASA ++ DP+ R +V VIE L + K N V++GE + G+
Sbjct: 101 LSHAASAGRI-------DPVIGREREVERVIETLNRRNKNNPVLIGEPGVGKTAIAEGLA 153
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I +G VP L++ L +SS + Q E +K L+ GR V+
Sbjct: 154 LRITEGKVPHKLKNRTVYLLDVSSLVANTGIR-GQFEERMKQLIAEVQGRTDVI 206
>gi|384215220|ref|YP_005606386.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
gi|354954119|dbj|BAL06798.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
Length = 880
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 34/298 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + V+ A +LA R GH Q + LHV +L + GL A L + +A+
Sbjct: 7 TERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGL--AAGLIDRAGG-NSRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAV 128
ALN++P + GG Q P ++ AA K A ++ G S ++ LL +
Sbjct: 64 TEDALNKVPKVSG----GGAGQIYLAPELARTFDAAEK---AGEKAGDSFVTVERLLLGL 116
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E ++ + G + + + +E +T ++ + +
Sbjct: 117 ALE---------KTSEAGAILAKGGVTPQNLNAAIEALRKGRTADSATAENAYDALKKYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVPE L+D K L L + + R E E+R++ + V + G I+
Sbjct: 221 LALRIVNGDVPETLQDKKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTASEGTFILF 278
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + V +A V + R+G R G F
Sbjct: 549 VDKMLEGEKEKLLKMEEQLGKRVVGQAEAVRAVATAVRRSRAGLQDPNRPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|319791259|ref|YP_004152899.1| type VI secretion ATPase, clpv1 family [Variovorax paradoxus EPS]
gi|315593722|gb|ADU34788.1| type VI secretion ATPase, ClpV1 family [Variovorax paradoxus EPS]
Length = 926
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 136/355 (38%), Gaps = 68/355 (19%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLH-VANTMLAASTGLLRTACLQSHSHPLQCKALE 70
L + A ++ A + RG+ V H A + A + L R +Q + L +
Sbjct: 13 LNSLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHR--VIQHYG--LDVSVIA 68
Query: 71 LCFNVALNRLPASTSTPMLGGHCQF-PTISNAL-----VAAFKRAQAHQRRGSI------ 118
AL+RLP + F P I NA+ A + +A R G I
Sbjct: 69 KDMTAALDRLPRGATA-----ISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVGMLK 123
Query: 119 -ENQQQPLLAVKIELEQLIISILDD--PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQS 175
++ + PL + + E++ + L D P V E+ + Q + + E
Sbjct: 124 TQSLRNPLFNLSKQFEKIKVEDLADNFPKVCDASPESQMRA-QDGTGMGSGAPGEDSGAM 182
Query: 176 TPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVV 233
P + K + T A K +DP+ R+E++ +++ LM +R+ N ++
Sbjct: 183 APAAMGKGDALKKFAVDLTEKAKKGE-----MDPVTGRDEEIRQIVDILMRRRQNNPLLT 237
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI--- 288
GE VV G ++ +GDVP L+DVK L L I + + E EQR+ ++
Sbjct: 238 GEAGVGKTAVVEGFAQRLARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDE 297
Query: 289 ------------------------------KNLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G WAE++
Sbjct: 298 VQSSPTPIILFIDEIHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYK 352
>gi|188582962|ref|YP_001926407.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
gi|179346460|gb|ACB81872.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
Length = 874
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 39/300 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS Q +
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQVEQ 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQPLL 126
P + G+ P + LV F A QA ++ G S ++ LL
Sbjct: 67 W-------------IAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLL 113
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A +E D R++ AG ++ + + + + + N S E+
Sbjct: 114 AFAVE---------KDGEAGRILTAAGVTAASLNAAIN-------ALRKGRTADNASAEN 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 AYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+ I+
Sbjct: 218 EGLALRIVNGDVPESLKEKNLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILF 277
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 715 NTLLIMTS 722
>gi|269124507|ref|YP_003297877.1| ATP-dependent chaperone ClpB [Thermomonospora curvata DSM 43183]
gi|268309465|gb|ACY95839.1| ATP-dependent chaperone ClpB [Thermomonospora curvata DSM 43183]
Length = 863
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 151/358 (42%), Gaps = 46/358 (12%)
Query: 21 KQAMTLARRR----GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVA 76
++A+++A RR GH QV PLH+ +LA G TA + +A+
Sbjct: 10 QEAVSIAVRRAAAEGHPQVEPLHLLVALLALPEG---TAVPLLEAVGADWQAVRSAAEER 66
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L RLP + G P +S L+ A A R+ +E++ + E L+
Sbjct: 67 LARLPRAA-----GSTVSSPQMSRQLIMAMNTAGNRARQ--MEDEY-------VSTEHLL 112
Query: 137 ISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+ + D ++V+REAG + + E+ + P + ++ E + L+ A
Sbjct: 113 VGLAADGGEAAQVLREAGATPQALLEAFEKVRGHARVTSEDPEGTYQALEKYGVDLTARA 172
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
K LDP+ R+ ++ V++ L + K N V++GE VV G+ +I
Sbjct: 173 REGK-------LDPVIGRDTEIRRVVQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRIVA 225
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAE 311
GDVPE+L+ + + L + + R E E+R++ + N ++S G+ V+ D
Sbjct: 226 GDVPESLKGKRLVALDLGAMVAGAKYRGEFEERLKAVLNEIKSSEGQ--VITFIDELHTV 283
Query: 312 FRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
A ++E M+ G ++ + ++G T Y P+LE
Sbjct: 284 VGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLDEYRERIEKDPALE 330
>gi|411002904|ref|ZP_11379233.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
Length = 879
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 132/303 (43%), Gaps = 30/303 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A ++A R GH +V H+ ++ GL+ Q+ S P + +
Sbjct: 6 LTQKSQEALQEAQSVAGRMGHTEVDGEHLLLALVDQEDGLIPRLLQQAGSDPAELRT--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++R P T + G ++ L A+ +R E +
Sbjct: 63 AVREEISRRPKVTGSGAAPGQV---FVTQRLAGLLDAAEREAKRLKDEY---------VS 110
Query: 132 LEQLIISILDD---PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ + R++ +AG + + Q + + + P + ++ E
Sbjct: 111 VEHLLLALAEEGASTAAGRLLNQAGITRDSFLGALTQVRGNQRVTSANPEVAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A + LDP+ R+ ++ V + L K K N V++G+ ++ G
Sbjct: 171 RDLVAEAKEGR-------LDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIIEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I +GDVPE LRD L + S R E E+R++ + + V++ G GI+L +
Sbjct: 224 LAQRIVRGDVPEGLRDKIVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQG-GILLFV 282
Query: 305 GDL 307
+L
Sbjct: 283 DEL 285
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E + L L L ++V Q + V +A+ +++ RSG R G F
Sbjct: 556 VARLQEGERDKLLRLDEILRERVVGQDEAVKLVADAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LAR +F S +N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELTKTLARALFDSEDNMVRLDMSEYQE---------RHTVSRL 654
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ Y E + EAV P+ V L +++E+A + ++ GRI + G
Sbjct: 655 MGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRITDAQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|300691677|ref|YP_003752672.1| chaperone [Ralstonia solanacearum PSI07]
gi|299078737|emb|CBJ51397.1| Chaperone [Ralstonia solanacearum PSI07]
gi|344169981|emb|CCA82355.1| chaperone [blood disease bacterium R229]
Length = 862
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + A +LA + + P+H+ ML G T L S + + KALE+
Sbjct: 6 LTTRFQEALADAQSLALGNDNPYIEPVHLLLAMLRQPDGA--TKNLLSRAG-VNAKALEV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP G Q +L+ QA ++ G I+ Q L +
Sbjct: 63 ALDNAVKRLPQVQG----GEQVQVGRDLGSLL------QATEKEG-IKRGDQFLAS---- 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ RE G + +++ ++ + + S ++ + +
Sbjct: 108 -ELFLLAVADDKGEAGRIAREHGLARRALEAAIDAVRGGQTVGSAEAESQREALKKYTID 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTEQARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+L++ + L L ++ R E E+R++ + N + G+ I+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILF 275
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGI---------SDENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S +
Sbjct: 602 GSFLFLGPTGVGKTELCKALAGFLFDSEEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|340625415|ref|YP_004743867.1| putative endopeptidase ATP binding protein subunit B [Mycobacterium
canettii CIPT 140010059]
gi|340003605|emb|CCC42726.1| putative endopeptidase ATP binding protein (chain B) CLPB (CLPB
protein) (heat shock protein F84.1) [Mycobacterium
canettii CIPT 140010059]
Length = 848
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 117/611 (19%), Positives = 221/611 (36%), Gaps = 104/611 (17%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
+ L + S + R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 237 IVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA-- 293
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSL 368
M+ G ++ + L+G T Y + G PS+
Sbjct: 294 ---------MDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSV 344
Query: 369 ETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLF 413
E + H + I +L + +D + ++ KA + S L
Sbjct: 345 EDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRM 404
Query: 414 EGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
E + ++ + E E +L S D ++ A L+ ++K L+
Sbjct: 405 EIDSRPVEIDEVERLVRRLEIEEMAL---SKEEDDASAERLAKLRSELADQKEKLA---- 457
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHR 530
+L +W + N+I E+ S + G + + +Y + +
Sbjct: 458 -----ELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEK 512
Query: 531 DWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSS 590
P+ RE L D S IP + L+ ++
Sbjct: 513 KLDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETA 559
Query: 591 DIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD 650
++ ME + L K+V QK V +++ V + R+G
Sbjct: 560 KLLRME-----------------DELGKRVIGQKAAVTAVSDAVRRSRAGV--------- 593
Query: 651 HSEVKEETWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
S+ T F F G K ++AK LA +F V I +S + +
Sbjct: 594 -SDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAP 652
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
++ + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 653 PGYVGYEAGG---QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTV 709
Query: 770 SLGDAIVILSC 780
+ I+IL+
Sbjct: 710 DFRNTILILTS 720
>gi|412986583|emb|CCO15009.1| predicted protein [Bathycoccus prasinos]
Length = 886
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGV 665
S+NL L L K+V Q + V +A V + RSG D S K + F G
Sbjct: 512 SKNLLGLEQELTKRVIGQNEAVVSVARAVRRARSG-------LADAS--KPVASVIFAGP 562
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNKRSRDEQSCSYI 721
K +++K LA + FG+ N V I +S + S++R Y
Sbjct: 563 TGVGKTELSKALATVYFGAEKNLVRIDMSEYMEAVSTSRLIGAPPG---------YVGYN 613
Query: 722 E--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
E + EAV NPH + L++++E+A + +E GR+ G V +A+++++
Sbjct: 614 EGGQLTEAVRRNPHSLILLDEIEKAHPDVFNALLQVLEDGRLTDGKGRTVDFTNAMLVMT 673
>gi|290962751|ref|YP_003493933.1| chaperone [Streptomyces scabiei 87.22]
gi|260652277|emb|CBG75410.1| chaperone [Streptomyces scabiei 87.22]
Length = 879
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 127/295 (43%), Gaps = 33/295 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A T A R G +V H+ +L GL+ Q+ P + +A
Sbjct: 6 LTQKSQEALQEAQTAAVRMGQTEVDGEHLLLALLDQEDGLIPRLLQQAGREPEEFRA--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L+R P T G F T +S L AA E + + L
Sbjct: 63 AVGEELSRRPKVTGPGAAPGQV-FVTQRLSRLLDAA-------------EREAKRLKDEY 108
Query: 130 IELEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ +E L++++ ++ S + R+++E G + S + Q + + + P + ++ E
Sbjct: 109 VSVEHLLLALAEEGSATAAGRLLKEHGITRDSFLSALTQIRGNQRVTSANPEVAYEALEK 168
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A K LDP+ R+ ++ V + L K K N V++G+ +V
Sbjct: 169 YGRDLVAEARNGK-------LDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
G+ +I +GDVPE LRD L + S R E E+R++ + + V++ G
Sbjct: 222 EGLAQRIVRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQG 276
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ +++ RSG R G F
Sbjct: 556 VARLQEGEREKLLRLDEILRERVIGQDEAVQLVADAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F S N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLAAALFDSEENMVRLDMSEYQE---------RHTVSRL 654
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ Y E + EAV P+ V L +++E+A + ++ GRI + G
Sbjct: 655 MGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|114561854|ref|YP_749367.1| ATPase [Shewanella frigidimarina NCIMB 400]
gi|114333147|gb|ABI70529.1| ATPase AAA-2 domain protein [Shewanella frigidimarina NCIMB 400]
Length = 865
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 4 GGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHP 63
GGC +T + + A +LA R H + P+H+ +L +G + + Q+
Sbjct: 6 GGCMRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDSGSIHSLLTQAG--- 62
Query: 64 LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAF----KRAQAHQRRGSIE 119
++ AL + L R P T GG Q +S L+ K AQ + +
Sbjct: 63 IRVSALRSAVSQELERFPQVEGT---GGDVQ---LSQGLIRLLNLCDKLAQKRKDK---- 112
Query: 120 NQQQPLLAVKIELEQLIISILD--DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
I E +++ L+ DP +++ ++++G S ++ +E +
Sbjct: 113 ---------YISSELFVLAALENNDP-LAKALKDSGASKELMEKTIEDMRGGQKVDDPNA 162
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGE 235
++ + + L++ A K LDP+ R+E++ I+ L + K N V++GE
Sbjct: 163 EDQRQALKKFTVDLTERAEQGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 215
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE +++ + L L + S R E E+R++ + N
Sbjct: 216 PGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERLKAVLN 272
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E E L + AL ++V Q + V ++N + + R+G R G F
Sbjct: 556 VSKMLEGEREKLLHMETALHERVIGQNEAVDAVSNAIRRSRAGLADPQRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA+ +F S + V I +S F S
Sbjct: 610 ------LFLGPTGVGKTELCKSLAKFLFDSESALVRIDMSEFMEKHTVSRLVGAPPGYVG 663
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 664 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNT 720
Query: 775 IVILS 779
++I++
Sbjct: 721 VIIMT 725
>gi|148658380|ref|YP_001278585.1| ATPase [Roseiflexus sp. RS-1]
gi|148570490|gb|ABQ92635.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 871
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 41/272 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + A + A R G++QV P H+ +L + G++ P L +
Sbjct: 8 LTQKSEEALLAAQSTAERNGNSQVEPEHLLLALLEQTDGVV----------PQVLARLNV 57
Query: 72 CFNVALNRLPASTST-PMLGG---HCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
V + ++ A + P + G Q+ P + N +V A + P
Sbjct: 58 AVGVLVQQVRAEINKFPRISGAGVQLQYSPRMRNVVVRA--------------ADEMPQF 103
Query: 127 AVK-IELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ I E L++SIL R++R+AG + ++ + + + + TP + +
Sbjct: 104 GDEYISTEHLLLSILQHAGGGAERILRQAGITRDKLLQALREVRGSQRVTSPTPEGTYAA 163
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L++ A K LDP+ R+E++ VI+ L + K N V++GE
Sbjct: 164 LEQYGRDLTELARRGK-------LDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKT 216
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
+V G+ +I + DVPEAL++ + + L + +
Sbjct: 217 AIVEGLAQRIVREDVPEALKNKRIIALDMGAL 248
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 36/262 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + L ++V Q + V +AN V + R+G R G F
Sbjct: 551 VSRLLEGEIEKLVHMEERLHRRVVGQDEAVSAVANAVRRARAGLQDPNRPLGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F + I +S + +
Sbjct: 605 ------LFLGPTGVGKTELARALAEFLFDDEQAMIRIDMSEYMEKHTVA-----RLIGAP 653
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L ++VE+A + + ++ GR+ G V+
Sbjct: 654 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHHDVFNILLQILDDGRLTDGHGRVVNFK 713
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLDLNICIDDDSTEDQ 832
+ ++I++ S SP ++ + ++GA+ E SV +L + +
Sbjct: 714 NTVIIMT-------SNIASPTIQELA-----QRGASQEIIRASVMEELRAQLRPEFL--N 759
Query: 833 SIDDIGLLESVDKRIIFKIMEL 854
ID+I + + + I KI+++
Sbjct: 760 RIDEIIVFRPLSRDQIGKIVDI 781
>gi|433629475|ref|YP_007263103.1| Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (Heat Shock Protein f84.1) [Mycobacterium
canettii CIPT 140070010]
gi|432161068|emb|CCK58403.1| Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (Heat Shock Protein f84.1) [Mycobacterium
canettii CIPT 140070010]
Length = 848
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 147/788 (18%), Positives = 285/788 (36%), Gaps = 130/788 (16%)
Query: 31 GHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLG 90
G+ ++ P H+ +L + G+ P +A L+RLP +T
Sbjct: 25 GNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRL---LDRLPQAT------ 75
Query: 91 GHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI-LDDPSVSRVM 149
G P +S +AA AQ Q I+++ + E +++ + D V++++
Sbjct: 76 GASTQPQLSRESLAAITTAQ--QLATEIDDEY-------VSTEHVMVGLATGDSDVAKLL 126
Query: 150 REAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDP 209
G S ++ + + P ++ ++ + L+ A K LDP
Sbjct: 127 TGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGK-------LDP 179
Query: 210 I--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLP 267
+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD +
Sbjct: 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239
Query: 268 LSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRGYYC 325
L + S + R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA----- 293
Query: 326 SIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSLETL 371
M+ G ++ + L+G T Y + G PS+E
Sbjct: 294 ------MDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDT 347
Query: 372 WSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLFEGE 416
+ H + I +L + +D + ++ KA + S L E +
Sbjct: 348 IGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEID 407
Query: 417 EENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDKDSG 476
++ + E E +L S D ++ A L+ ++K L+
Sbjct: 408 SRPVEIDEVERLVRRLEIEEMAL---SKEEDEASAERLAKLRSELADQKEKLA------- 457
Query: 477 VRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHRDWA 533
+L +W + N+I E+ S + G + + +Y + +
Sbjct: 458 --ELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLD 515
Query: 534 VVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIM 593
P+ RE L D S IP + L+ ++ ++
Sbjct: 516 SALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETAKLL 562
Query: 594 EMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSE 653
ME + L K+V QK V +++ V + R+G S+
Sbjct: 563 RME-----------------DELGKRVIGQKAAVTAVSDAVRRSRAGV----------SD 595
Query: 654 VKEETWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRS 712
T F F G K ++AK LA +F V I +S + +
Sbjct: 596 PNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGY 655
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
++ + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 656 VGYEAGG---QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFR 712
Query: 773 DAIVILSC 780
+ I+IL+
Sbjct: 713 NTILILTS 720
>gi|299067390|emb|CBJ38589.1| Chaperone [Ralstonia solanacearum CMR15]
Length = 862
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + A +LA + + P+H+ ML G + ++ + K LE+
Sbjct: 6 LTTRFQEALADAQSLALGNDNPYIEPVHLLLAMLRQPDGATKNLLARAG---VNAKGLEI 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP G Q +L+ QA ++ G Q I
Sbjct: 63 ALDNAIKRLPQVQG----GEQVQVGRDLGSLL------QATEKEGIKRGDQ------FIA 106
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD RV RE G + +++ ++ + + S ++ + +
Sbjct: 107 SELFLLAVADDKGEAGRVAREHGLARKALEAAIDAVRGGQTVGSAEAESQREALKKYTID 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTEQARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+L++ + L L ++ R E E+R++ + N + G+ I+
Sbjct: 220 QRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILF 275
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 14/198 (7%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VAKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIA---------DENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S +
Sbjct: 602 GSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSCESFSS--RSRACSPP 793
++ S + A PP
Sbjct: 719 MTSNLGSQLIQQMASEPP 736
>gi|297568051|ref|YP_003689395.1| ATP-dependent chaperone ClpB [Desulfurivibrio alkaliphilus AHT2]
gi|296923966|gb|ADH84776.1| ATP-dependent chaperone ClpB [Desulfurivibrio alkaliphilus AHT2]
Length = 874
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 34/269 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A +LA R H ++ P H+A +L + G++ LQ + A E+
Sbjct: 6 FTMKSQEAVQEAQSLALERQHQELQPEHLAKVLLDQTDGVI-APVLQKMGVSREKLAAEM 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+++LP + G Q L AFK A Q
Sbjct: 65 --EALVSKLPQVSGA----GATQLYASTAFQRLLDRAFKVASGMQDE------------- 105
Query: 129 KIELEQLIISILDD--PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L++++L+D + +RV+ G + +E + + P ++ E
Sbjct: 106 YVSQEHLVLALLEDKDAAAARVLTAQGVTKDAFLKALESVRGSQRVTDPNPEDKYQALEK 165
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L+ A K LDP+ R+++V V++ L + K N V++GE +V
Sbjct: 166 YARNLTDVARQGK-------LDPVIGRDDEVRRVVQVLSRRTKNNPVLIGEPGVGKTAIV 218
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I GDVP+ LR+ + + L + +
Sbjct: 219 EGLAQRIVNGDVPDTLRNKQVIALDMGAL 247
>gi|398939519|ref|ZP_10668612.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM41(2012)]
gi|398163841|gb|EJM51990.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM41(2012)]
Length = 884
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 52/238 (21%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + S K N+E+ +
Sbjct: 94 QDALLVANLELGQSQVEQAALILALLRNP-----MRYAGSRYQSLLSKLNIERLKEFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
+ P + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QKEQPATGKPAVPGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR---- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGV 267
Query: 285 VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 IDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 325
>gi|315122701|ref|YP_004063190.1| ATP-dependent Clp protease, ATP-binding subunit protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496103|gb|ADR52702.1| ATP-dependent Clp protease, ATP-binding subunit protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 855
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 22 QAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLP 81
QA LA+ GH + P H+ +T L + G + CL S L AL+++P
Sbjct: 18 QAYALAQ--GHQNLVPEHLLHTFLEDAEGFI---CLLIQSSGGDLGKLRNANRSALSKIP 72
Query: 82 ASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLIISI 139
T GG Q +S L A +A+ A + S ++ LLA+ I
Sbjct: 73 KVT-----GGGGQV-YLSQPLAAILSKAEEIAKKSGDSFVTAEKVLLAM----------I 116
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
L SV +++ G S +++ ++++ + V+ + + E L +
Sbjct: 117 LAKESVGDSLKKCGISINRLEESIKKL-------RKGRVADSANAEQGFDALKKYCRDLT 169
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ I+ L + K N V++G+ ++ G+ +I GDVP
Sbjct: 170 AEARDGKLDPVIGRDDEMRRSIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIVNGDVP 229
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
E+L+D + + L I + R E E+R++ + +RS G IVL + +L
Sbjct: 230 ESLKDKRLMALDIGALIAGAKFRGEFEERLKSLIGEIRSENGE-IVLFIDEL 280
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + E + + K V Q + +++ + + R+G R G F
Sbjct: 548 VDKMLASDREKFVRIEEEISKSVVGQSAAIESVSHALRRFRAGLQDPRRPMGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LARL+F N+ + I +S + + S
Sbjct: 602 ------MFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVS-----RLIGAP 650
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV +P++V L +++E+A + ++ GR+ S G V
Sbjct: 651 PGYVGYEEGGILTEAVRRHPYQVVLFDEMEKAHSDVHNILLQVLDDGRLTDSQGRTVDFR 710
Query: 773 DAIVILS 779
+ ++I++
Sbjct: 711 NTLIIMT 717
>gi|254558918|ref|YP_003066013.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
gi|254266196|emb|CAX21953.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
Length = 874
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQS---HSHPLQ 65
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS H+ Q
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQVEQ 66
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQ 123
A P + G+ P + LV F A QA ++ G S ++
Sbjct: 67 WLA----------------KQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVER 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
LLA +E D R++ AG ++ + + + + + N S
Sbjct: 111 LLLAFAVE---------KDGEAGRILTAAGVTAASLNAAIN-------ALRKGRTADNAS 154
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E+ L + A + LDP+ R+E++ I+ L + K N V++GE
Sbjct: 155 AENAYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKT 214
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRG 299
+V G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+
Sbjct: 215 AIVEGLALRIVNGDVPESLKEKSLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQI 274
Query: 300 IVL 302
I+
Sbjct: 275 ILF 277
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 24/219 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
+ ++I++ S + P Q +D +E + G
Sbjct: 715 NTLLIMTSNLGS--EYLVNQPAGQDTDVVRDEVMGVVRG 751
>gi|212715374|ref|ZP_03323502.1| hypothetical protein BIFCAT_00269 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661680|gb|EEB22255.1| hypothetical protein BIFCAT_00269 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 905
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 34/293 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+ + +L G++R + +
Sbjct: 5 MEQKFTTLAQEAISDAVQNASAAGNAQVETLHLLDALLRQENGVIRGLIEAAGGNAQNIS 64
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A + A + LP+++ G P +S L A AQA + + ++
Sbjct: 65 A---AVHQAQDELPSAS-----GSTTAQPQVSRQLSAVL--AQAGKEMHQMGDEY----- 109
Query: 128 VKIELEQLIISILD-DPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I+I P+ S ++M + G ++ ++ V + S K+ E
Sbjct: 110 --VSTEHLLIAIAAAKPNQSAQIMEQYGVTADALRKAVPSIRGGAKVTSPDAEGSYKALE 167
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 168 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 220
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
V G+ +I GDVP L++ K + L + S + R E E+R ++EIKN
Sbjct: 221 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLQEIKN 273
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ + L K+V QK+ + +++ V + R+G R G F
Sbjct: 582 VGRLMQGENEKLLTMEDYLGKRVIGQKEAIQAVSDAVRRSRAGISDPNRPTGSF------ 635
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 636 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 682
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 683 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 741
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 742 DFKNTILIMTS 752
>gi|318041187|ref|ZP_07973143.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CB0101]
Length = 872
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 13/178 (7%)
Query: 130 IELEQLIISI-LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I +E L++++ +DD +++ +AG +T++K V+ + + P + +S E
Sbjct: 107 IAIEHLLLALAIDDRCGKQLLSQAGTDATKLKDAVQAIRGSQTVTDQNPEGTYESLEKYG 166
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 167 RDLTQAAKDGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVP+AL++ + + L + + R E E+R++ + V + G+ IVL
Sbjct: 220 LAQRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGQ-IVL 276
>gi|296122295|ref|YP_003630073.1| ATP-dependent chaperone ClpB [Planctomyces limnophilus DSM 3776]
gi|296014635|gb|ADG67874.1| ATP-dependent chaperone ClpB [Planctomyces limnophilus DSM 3776]
Length = 871
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT +A +++A LA G QV PLH+ +L S+G++R + Q +L
Sbjct: 8 LTVKAQEALQEAQQLAENNGQPQVQPLHLIKALLDESSGVVRPILEKIGVRLTQLTSL-- 65
Query: 72 CFNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAV 128
+ ++RLP S S+ +G S+AL+ ++Q A Q + + + LLA+
Sbjct: 66 -VDSEISRLPKVSGSSSQVGA-------SSALMDVLNKSQQLADQMKDQFVSTEHLLLAL 117
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I D R+++ G + V ++ + + P ++ E
Sbjct: 118 ----------IKSDDVAGRLLKMNGVEESDVLKALQSIRGHQQVTDQNPEDKYQALEKYG 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A K+ DP+ R+ ++ VI+ L +RK N V++G+ +V G
Sbjct: 168 KDLVALARLGKI-------DPVIGRDSEIRRVIQVLSRRRKNNPVLIGDAGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF 273
+ +I DVP+ L++ + + L + +
Sbjct: 221 LAHRIVLEDVPQNLKNKRVIALDMGAL 247
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + L S+ + + K++ Q++ V ++N V + RSG R G F
Sbjct: 559 VARMMQTEKAKLLSMEDQIHKRMINQEEAVTAVSNAVRRARSGMQDPNRPIGSF------ 612
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F V I +S F S R
Sbjct: 613 ------MFLGPTGVGKTELCKALAEFLFDDEKAMVRIDMSEFMEKHSVARLIGAPPG--- 663
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L+++VE+A + ++ GR+ G
Sbjct: 664 ------YVGYEEGGKLTEAVRRRPYSVLLLDEVEKAHRDVFNVLLQVLDDGRLTDGQGRT 717
Query: 769 VSLGDAIVILSC 780
V + I++++
Sbjct: 718 VDFTNTIIVMTS 729
>gi|148556033|ref|YP_001263615.1| ATPase [Sphingomonas wittichii RW1]
gi|148501223|gb|ABQ69477.1| ATPase AAA-2 domain protein [Sphingomonas wittichii RW1]
Length = 859
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 27/296 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H ++ P H+ +L G+ + P A+
Sbjct: 6 FTDRAKGFLQSAQTVAIRNSHQRIAPEHLLKALLEDEQGMASGLIKAAGGDP--AVAMR- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
+ AL ++PA + + G P + N L +A Q Q+ G V +
Sbjct: 63 ATDAALAKIPAVSGS----GAQATPGLDNDLARVLDQAEQIAQKAGDS--------YVTV 110
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L +++ + + EAG + + + + + ++ + +
Sbjct: 111 ERMLLALTLATTSPAGKALAEAGVRAEALNAAINELRGGRSADTASAEDRYDALKKFARD 170
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G+
Sbjct: 171 LTQAARDGK-------LDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIAEGLA 223
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP+ L+D K + L + S R E E+R++ + + V+ G+ I+
Sbjct: 224 LRIANGDVPDGLKDRKVMALDMGSLIAGAKYRGEFEERLKGVLDEVKGAEGQIILF 279
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ + L K+V QKD + ++ V + R+G R G F
Sbjct: 549 VDKMLEGEREKLLAMEDELGKRVIGQKDAIEAVSRAVRRSRAGLQDPNRPLGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++ K LA +F + V I +S F S R
Sbjct: 603 ------LFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPG--- 653
Query: 711 RSRDEQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E EAV P++V L ++VE+A + ++ GR+ G
Sbjct: 654 ------YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRT 707
Query: 769 VSLGDAIVILSC 780
V + ++IL+
Sbjct: 708 VDFSNTLIILTS 719
>gi|407783886|ref|ZP_11131078.1| ATP-dependent Clp protease ATP-binding subunit [Oceanibaculum
indicum P24]
gi|407199417|gb|EKE69436.1| ATP-dependent Clp protease ATP-binding subunit [Oceanibaculum
indicum P24]
Length = 865
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 32/298 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A T+A RGH ++ P H+ +L + GL S P KAL
Sbjct: 6 FTERSKGFLQSAQTMALTRGHQRLMPEHLLKVLLDDAEGLAANLIRASGGDP--AKALAT 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ L +LP + G Q P ++ L A K A+ + G + LL
Sbjct: 64 T-DAVLEKLPRVEGS----GAGQVYLSPELARILDQATKIAE---KAGDKFVTAERLL-- 113
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
L +++ D + ++EAG + ++ + +T + +
Sbjct: 114 ------LALAMADGTDAGKALKEAGLTPQKLNEAINDVRKGRTADTATAEQGYDALKRYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+ A K+ DP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 168 RDLTAAAREGKI-------DPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVPE L++ + L L + + R E E+R++ + + + S G I+
Sbjct: 221 LAQRIVNGDVPETLKNRRLLSLDLGALIAGAKFRGEFEERLKAVLSEIASAAGEIILF 278
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ L ++V Q + ++N + + R+G R G F
Sbjct: 548 VDKMMEGEREKLLTMEGKLRQRVIGQDPAIIAVSNAIRRARAGLQDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A S
Sbjct: 602 ------LFLGPTGVGKTELTKALAEFLFDDEQAMVRIDMSEYMEKHAVS-----RLIGAP 650
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 651 PGYVGYEEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 710
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 711 NTLIIMTS 718
>gi|288803299|ref|ZP_06408732.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
D18]
gi|288334119|gb|EFC72561.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
D18]
Length = 862
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ +A+R G + P+H+ ++ ++ + +A+E
Sbjct: 6 FTIKAQEAVQSAINIAQRNGQQTIEPVHILAGVMDKGKDVINYVF---QKIGVNAQAVET 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG----SIENQQQPLLA 127
++ LP + GG + +N ++ + + Q+ G SIE LLA
Sbjct: 63 AIQNEMSHLPKVS-----GGEPYLSSETNQVMQ--RTVETSQKMGDEFVSIEPMLLALLA 115
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
V + + SR++++AG + E ++ Q V S +S + N
Sbjct: 116 V-------------NSTASRILKDAGCTEK------EMTAAINDLRQGQKVQS-QSGDEN 155
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L + A LDP+ R+E++ V++ L + K N +++GE +V
Sbjct: 156 YQSLQKYARNLIEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVE 215
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ ++I +GDVPE L+D + L + +
Sbjct: 216 GLAERIVRGDVPENLKDKQLYSLDMGAM 243
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +A+ V + R+G K K F G
Sbjct: 555 DKLLHLEDELHKRVIGQDEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS TR Y E
Sbjct: 606 GTGKTELAKALADYLFNDESMMTRIDMSEYQEKFSVTRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ G + + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGHLTDNKGRTVNFKNTIIIMTS 716
>gi|90420190|ref|ZP_01228098.1| chaperone clpB [Aurantimonas manganoxydans SI85-9A1]
gi|90335524|gb|EAS49274.1| chaperone clpB [Aurantimonas manganoxydans SI85-9A1]
Length = 874
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A R H Q TP H+ ++ G+ ++ P + + + AL+
Sbjct: 14 IQAAQTQAVSRDHQQFTPEHLLKVLIDDEEGMAAGLIEKAGGRPQEVR---IAVEAALDA 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
+P + GG Q ++ L F A+ A + S + ++ LLA+ IE
Sbjct: 71 MPKVS-----GGGSQM-YLAQPLAKIFATAEEIAKKAGDSYVSVERLLLAMTIEKATKTA 124
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
+IL + AG + + + +E + + + S ES L + A
Sbjct: 125 TILAN---------AGVTPNGLNAAIE-------TLRKGRTADSASAESGYDALKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
+ LDP+ R++++ I+ L + K N V++GE + G+ +I GD
Sbjct: 169 LTAAAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+LRD + + L + S R E E+R++ + + V + G I+
Sbjct: 229 VPESLRDKQLMALDMGSLIAGAKYRGEFEERLKAVLSEVTAAAGNIILF 277
>gi|367049866|ref|XP_003655312.1| hypothetical protein THITE_2118883 [Thielavia terrestris NRRL 8126]
gi|347002576|gb|AEO68976.1| hypothetical protein THITE_2118883 [Thielavia terrestris NRRL 8126]
Length = 923
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---------------AASTGLLRTAC 56
T A ++ AM LA + H+Q+ P+H+A +L ++ L R
Sbjct: 3 FTDRAKKALEDAMALAEQYSHSQLVPVHLAVALLDPLPDQSKDQQNAPPGTTSSLFRQVV 62
Query: 57 LQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG 116
+++ P + + +L RLP+ P + +++ +L ++A Q+
Sbjct: 63 ERANGDP---QLFDRALKKSLVRLPSQEPPP------ESVSMAPSLNTVLRKAMELQK-- 111
Query: 117 SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQST 176
Q+ +AV + LI ++ +DPS+ ++EA +++ V+ AV+ ++
Sbjct: 112 ---VQKDTYIAV----DHLITALSEDPSIQVALKEANIPKSKL---VQDAVTAIRGTRRV 161
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+ +++ N + T T +++ +DP+ R E++ VI L + K N V++G
Sbjct: 162 DSRNADTEQENENLSKFTIDMTAMAR-EGKIDPVIGREEEIRRVIRILSRRTKNNPVLIG 220
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
E +V G+ +I DVP+ L K L L + +
Sbjct: 221 EPGVGKTTIVEGLAQRIVNADVPDNLAACKLLSLDVGAL 259
>gi|429860653|gb|ELA35379.1| heat shock protein hsp98 [Colletotrichum gloeosporioides Nara gc5]
Length = 904
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML--------------AASTGLLRTACL 57
T V+ AM LA + H+Q+ P+H+A ++L ++ + R
Sbjct: 7 FTDRGEKAVQDAMALAEQYAHSQLLPVHLAVSLLDPPADQSKDQQNAPPPTSSMFRQVVE 66
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++H P + + L RLP+ P +++ A ++AQ Q+
Sbjct: 67 RAHGDP---QLFDRALKKTLVRLPSQDPPP------DQVSVAPTFHAVLRKAQELQK--- 114
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
Q+ +AV + LI ++ +D ++ ++EA ++ V AV+ ++
Sbjct: 115 --TQKDSFIAV----DHLIQALAEDHTIQTCLKEANIPKPKL---VHDAVTQIRGTKRVD 165
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGE 235
+ ++E + + T T +++ + +DP+ R E++ V+ L + K N V++GE
Sbjct: 166 SKNADTEEEHENLAKFTIDMTAMARDK-KIDPVIGREEEIRRVVRILSRRTKNNPVLIGE 224
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
VV G+ +I DVP+ L+ K L L + +
Sbjct: 225 PGVGKTTVVEGLAQRIVNRDVPDNLKACKLLSLDVGAL 262
>gi|378822292|ref|ZP_09845094.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
11816]
gi|378598886|gb|EHY31972.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
11816]
Length = 867
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 33/305 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q LT + + + +A +LA + + P+H+ + +LA GL ++ ++ +Q
Sbjct: 3 QDKLTTKFQTAIAEAQSLALANDNQYIEPVHLLSAVLADPDGLSKSLLERAG---VQVAK 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLLA 127
L + RLP + T GG Q +S L+ A + +RG
Sbjct: 60 LARDAKTEVERLPKVSGT---GGEVQ---VSRELINALNLTEKEAMKRGD---------- 103
Query: 128 VKIELEQLIISILDDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E ++++ +D S + R+ +EAG + +++ + + S ++ +
Sbjct: 104 AYVSTEMFLLALTEDKSAAGRIAKEAGLTRAALEAAIASVRGKDTADNPDAESQRETLKK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R++++ ++ L + K N V++GE VV
Sbjct: 164 YTIDLTERARQGK-------LDPVIGRDDEIRRTMQILQRRSKNNPVLIGEPGVGKTAVV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +VP+ L+ K L L ++ R E E+R++++ V + GR I+L
Sbjct: 217 EGLAQRIVNDEVPDTLKGKKVLSLDMAGLIAGAKYRGEFEERLKKLLEEVVAQEGR-IIL 275
Query: 303 NLGDL 307
+ +L
Sbjct: 276 FIDEL 280
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E L + ALE +V Q + V + T+++ R+G R G F
Sbjct: 553 VAKMMEGERAKLLHMGEALESRVVGQDEAVKRVTETIMRSRAGLSDPNRPYGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 607 ------LFLGPTGVGKTELTKALANFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVG 660
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 661 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNT 717
Query: 775 IVILSC 780
+++++
Sbjct: 718 VIVMTS 723
>gi|313894790|ref|ZP_07828350.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. oral taxon
137 str. F0430]
gi|312976471|gb|EFR41926.1| ATP-dependent chaperone protein ClpB [Selenomonas sp. oral taxon
137 str. F0430]
Length = 857
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACLQSHSHPLQ 65
Q TA + ++ A +A R H ++T HV + GLL T C +
Sbjct: 3 QDKYTARTLAALQSAQQIAAMRYHQEITSAHVLLALAKEPEGLLATIFSVC------GVD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
L+ L +PA T LG + +V RA E Q +
Sbjct: 57 LPMLKARLEKELASIPAVRGTNRLG-------MGMDMVRVLGRA---------EELAQSM 100
Query: 126 LAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L+++++ D S V ++ RE G + + V+ +++ + S + P +S
Sbjct: 101 KDEYVSTEHLLLALVTDGSDEVQKIAREFGLTKSSVQDAIKKNRKQNVTSDN-PEEGYQS 159
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E ++ A A K LDP+ R+E++ IE L + K N V++GE
Sbjct: 160 LEKYGRDMTAAARANK-------LDPVIGRDEEIRRTIEILSRRTKNNPVLIGEPGVGKT 212
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 213 AIVEGLARRIVAGDVPESLKNKTLYALDMGALVAGAKFRGEFEERLKGVLN 263
>gi|374309006|ref|YP_005055436.1| ATP-dependent chaperone ClpB [Granulicella mallensis MP5ACTX8]
gi|358751016|gb|AEU34406.1| ATP-dependent chaperone ClpB [Granulicella mallensis MP5ACTX8]
Length = 877
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ ++ A A G+ +V PLH+ +L G++ L+ P Q L
Sbjct: 8 FTVKSQEAIQGAQGHAAENGNPEVLPLHLMAALLEDKEGVV-LPVLEKVGVPAQQ--LLA 64
Query: 72 CFNVALNRLPA--STSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
N A+++LP + P LG Q L AFK A EN + ++ +
Sbjct: 65 QVNAAIDKLPKVQGAAQPGLGSAMQ-----KVLDGAFKEA---------ENFKDDYVSTE 110
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
L L +S V + G T + + QAV SQ ++++ E
Sbjct: 111 HLL--LALSASKGEPVQTALAAFGADHTAILKAL-QAVR---GSQRV---TDQNPEGKFQ 161
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A R LDP+ R+E++ VI+ L + K N V++GE +V G+
Sbjct: 162 ALAKYAKDLTEQARRGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGL 221
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE LRD + + L + S
Sbjct: 222 ARRIFQGDVPEILRDKRVISLDLGSM 247
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 25/218 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
+ K E + LT + L ++V Q + + +AN + + R+G R G F
Sbjct: 560 IAKMLEGEVQKLTQMEQRLRERVVGQDEALVVVANAIRRSRAGLSDPKRPIGSF------ 613
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K + A+ LA +F V I +S + A +
Sbjct: 614 ------IFLGPTGVGKTETARALAEFLFDDEQAMVRIDMSEYMEKHAVARLIGAPPGYVG 667
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + EA+ P+ V L +++E+A + ++ GR+ S G V
Sbjct: 668 FDEGG-----QLTEAIRRRPYAVVLFDEIEKAHPDVFNVLLQVLDDGRLTDSKGRTVDFK 722
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAME 810
+ ++I++ + + S + DG E K ME
Sbjct: 723 NTVLIMTSNLGAGQ---LSTAWAEGEDGFAEAKNRVME 757
>gi|223997144|ref|XP_002288245.1| member of the HSP104/clp superfamily [Thalassiosira pseudonana
CCMP1335]
gi|220975353|gb|EED93681.1| member of the HSP104/clp superfamily [Thalassiosira pseudonana
CCMP1335]
Length = 926
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 127/309 (41%), Gaps = 40/309 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA--ASTGLLRTACLQSHSHP------ 63
+T ++Q +++AR GHA P+H+A + A S G A + S+
Sbjct: 6 MTDATTKAIEQCLSIARDNGHALAEPIHLAAALFADDESIGSRVVAKADAGSNNTTSYQQ 65
Query: 64 ------LQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
+ + + A+ + P + P +IS +L +RA + S
Sbjct: 66 QQQQDLIDVRQVRQAIQRAILKKPTQSPPP------HEASISTSLQKVIQRAIS-----S 114
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTP 177
+ L+A L+ L+++I DD + + AG S E+ + ++
Sbjct: 115 AKANGDSLVA----LDHLLVAIYDDKTTKDTLESAGLSKKIATKATEEIRGGRKVTSASA 170
Query: 178 VSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGE 235
S ++ E + L + A K LDP+ R+E++ +I+ L + K N +VGE
Sbjct: 171 EESYEALEKYGIDLVKAADEGK-------LDPVIGRDEEIRRIIQILCRRTKNNPCLVGE 223
Query: 236 CLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVR 293
+V G+ +I GDVP L+DV L + + R E E+R+ + + +
Sbjct: 224 PGTGKTAIVEGLAKRILDGDVPLTLKDVALRTLDMGALVAGAKYRGEFEERLRAVLDECK 283
Query: 294 SCLGRGIVL 302
GR I+
Sbjct: 284 KANGRIILF 292
>gi|268318011|ref|YP_003291730.1| ATP-dependent chaperone ClpB [Rhodothermus marinus DSM 4252]
gi|262335545|gb|ACY49342.1| ATP-dependent chaperone ClpB [Rhodothermus marinus DSM 4252]
Length = 880
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 27/267 (10%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
Q T +A V++A+ +A ++ H + P H+ +L+ G + L+ L+ L
Sbjct: 4 QKFTVKAQEAVQRALEIAAQKNHQAIEPPHLLKALLSEPQGTA-VSILKRLGASLEL--L 60
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
+ AL +LP + G + + N L F RA A S+ +
Sbjct: 61 NTKADQALAKLPVVHGASVSGQY-----VGNELKKVFDRALAE---ASLLKDEY------ 106
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+ E L+I++ + + V + +RE G + ++ NV L+ + V+ ++E
Sbjct: 107 VSTEHLLIALAESQTDVGQALREQGVTKEKI-LNV-----LKDVRGAQRVTDPHAEERYE 160
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ T++++ + LDP+ R+E++ V++ L + K N V+VGE +V G
Sbjct: 161 ALQRYGRDLTELAR-KGKLDPVIGRDEEIRRVLQILSRRMKNNPVLVGEAGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF 273
+ +I +GDVPE+L+D + + L + +
Sbjct: 220 LALRIVQGDVPESLKDRRIVALDMGAL 246
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 30/172 (17%)
Query: 618 KKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKEKIA 674
K+V Q + + +AN V + R+G R G F F G K ++A
Sbjct: 569 KRVVGQPEAISAVANAVRRGRAGLQEPNRPIGSF------------IFLGSTGVGKTELA 616
Query: 675 KELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR----DEQSCSYIE--RFAEAV 728
K LA +F N + I +S + R+ SR Y E + EAV
Sbjct: 617 KALAEALFNDENAMIRIDMSEYQ---------ERHSVSRLIGAPPGYVGYEEGGQLTEAV 667
Query: 729 SNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
P+ V L++++E+A + ++ GR+ + G + I+I++
Sbjct: 668 RRRPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDNKGRTADFRNTIIIMTS 719
>gi|15607525|ref|NP_214898.1| Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (heat shock protein F84.1) [Mycobacterium
tuberculosis H37Rv]
gi|15839768|ref|NP_334805.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Mycobacterium
tuberculosis CDC1551]
gi|31791561|ref|NP_854054.1| endopeptidase ATP-binding protein ClpB [Mycobacterium bovis
AF2122/97]
gi|121636297|ref|YP_976520.1| endopeptidase ATP binding protein subunit B [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148660150|ref|YP_001281673.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Mycobacterium
tuberculosis H37Ra]
gi|148821580|ref|YP_001286334.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
tuberculosis F11]
gi|224988769|ref|YP_002643456.1| endopeptidase ATP binding protein chain b [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253797307|ref|YP_003030308.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 1435]
gi|254549327|ref|ZP_05139774.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289441763|ref|ZP_06431507.1| ATP-dependent chaperone ClpB [Mycobacterium tuberculosis T46]
gi|289445922|ref|ZP_06435666.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis CPHL_A]
gi|289572969|ref|ZP_06453196.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis K85]
gi|289744081|ref|ZP_06503459.1| ATP-dependent chaperone clpB [Mycobacterium tuberculosis 02_1987]
gi|289748868|ref|ZP_06508246.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis T92]
gi|289752413|ref|ZP_06511791.1| clpB [Mycobacterium tuberculosis EAS054]
gi|289756452|ref|ZP_06515830.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289760496|ref|ZP_06519874.1| endopeptidase ATP binding protein (chain B) clpB [Mycobacterium
tuberculosis GM 1503]
gi|297632866|ref|ZP_06950646.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 4207]
gi|297729841|ref|ZP_06958959.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN R506]
gi|298523859|ref|ZP_07011268.1| clpB [Mycobacterium tuberculosis 94_M4241A]
gi|306774478|ref|ZP_07412815.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu001]
gi|306779225|ref|ZP_07417562.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu002]
gi|306787381|ref|ZP_07425703.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu004]
gi|306791932|ref|ZP_07430234.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu005]
gi|306801978|ref|ZP_07438646.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu008]
gi|306966386|ref|ZP_07479047.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu009]
gi|306970582|ref|ZP_07483243.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu010]
gi|307078309|ref|ZP_07487479.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu011]
gi|307082868|ref|ZP_07491981.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu012]
gi|313657170|ref|ZP_07814050.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN V2475]
gi|339630454|ref|YP_004722096.1| endopeptidase ATP-binding protein subunit B [Mycobacterium
africanum GM041182]
gi|375294589|ref|YP_005098856.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 4207]
gi|378770130|ref|YP_005169863.1| chaperone protein clpB [Mycobacterium bovis BCG str. Mexico]
gi|385993484|ref|YP_005911782.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis CCDC5079]
gi|385997155|ref|YP_005915453.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis
CTRI-2]
gi|392385101|ref|YP_005306730.1| clpB [Mycobacterium tuberculosis UT205]
gi|392430799|ref|YP_006471843.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 605]
gi|397672175|ref|YP_006513710.1| chaperone ClpB [Mycobacterium tuberculosis H37Rv]
gi|424802934|ref|ZP_18228365.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium
tuberculosis W-148]
gi|433625480|ref|YP_007259109.1| Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (Heat Shock Protein f84.1) [Mycobacterium
canettii CIPT 140060008]
gi|449062379|ref|YP_007429462.1| endopeptidase ATP binding protein [Mycobacterium bovis BCG str.
Korea 1168P]
gi|54036851|sp|P63287.1|CLPB_MYCBO RecName: Full=Chaperone protein ClpB
gi|54036852|sp|P63288.1|CLPB_MYCTU RecName: Full=Chaperone protein ClpB
gi|13879896|gb|AAK44619.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Mycobacterium
tuberculosis CDC1551]
gi|31617147|emb|CAD93254.1| PROBABLE ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB
PROTEIN) (HEAT SHOCK PROTEIN F84.1) [Mycobacterium bovis
AF2122/97]
gi|121491944|emb|CAL70407.1| Probable endopeptidase ATP binding protein (chain b) clpB
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148504302|gb|ABQ72111.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Mycobacterium
tuberculosis H37Ra]
gi|148720107|gb|ABR04732.1| endopeptidase ATP binding protein subunit B clpB [Mycobacterium
tuberculosis F11]
gi|224771882|dbj|BAH24688.1| putative endopeptidase ATP binding protein chain b [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253318810|gb|ACT23413.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 1435]
gi|289414682|gb|EFD11922.1| ATP-dependent chaperone ClpB [Mycobacterium tuberculosis T46]
gi|289418880|gb|EFD16081.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis CPHL_A]
gi|289537400|gb|EFD41978.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis K85]
gi|289684609|gb|EFD52097.1| ATP-dependent chaperone clpB [Mycobacterium tuberculosis 02_1987]
gi|289689455|gb|EFD56884.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis T92]
gi|289693000|gb|EFD60429.1| clpB [Mycobacterium tuberculosis EAS054]
gi|289708002|gb|EFD72018.1| endopeptidase ATP binding protein (chain B) clpB [Mycobacterium
tuberculosis GM 1503]
gi|289712016|gb|EFD76028.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298493653|gb|EFI28947.1| clpB [Mycobacterium tuberculosis 94_M4241A]
gi|308216983|gb|EFO76382.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu001]
gi|308327825|gb|EFP16676.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu002]
gi|308335937|gb|EFP24788.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu004]
gi|308339589|gb|EFP28440.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu005]
gi|308351279|gb|EFP40130.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu008]
gi|308355932|gb|EFP44783.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu009]
gi|308359889|gb|EFP48740.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu010]
gi|308363790|gb|EFP52641.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu011]
gi|308367411|gb|EFP56262.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis SUMu012]
gi|326902210|gb|EGE49143.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium
tuberculosis W-148]
gi|328457094|gb|AEB02517.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 4207]
gi|339293438|gb|AEJ45549.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis CCDC5079]
gi|339329810|emb|CCC25458.1| putative endopeptidase ATP binding protein (chain B) ClpB (CLPB
protein) (heat shock protein F84.1) [Mycobacterium
africanum GM041182]
gi|341600313|emb|CCC62983.1| probable endopeptidase ATP binding protein (chain b) clpB
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344218201|gb|AEM98831.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis
CTRI-2]
gi|356592451|gb|AET17680.1| Chaperone protein clpB [Mycobacterium bovis BCG str. Mexico]
gi|378543652|emb|CCE35923.1| clpB [Mycobacterium tuberculosis UT205]
gi|379026507|dbj|BAL64240.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|392052208|gb|AFM47766.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium
tuberculosis KZN 605]
gi|395137080|gb|AFN48239.1| chaperone ClpB [Mycobacterium tuberculosis H37Rv]
gi|432153086|emb|CCK50299.1| Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (Heat Shock Protein f84.1) [Mycobacterium
canettii CIPT 140060008]
gi|440579836|emb|CCG10239.1| putative ENDOPEPTIDASE ATP BINDING protein (CHAIN B) CLPB (CLPB
protein) (HEAT SHOCK protein F84,1) [Mycobacterium
tuberculosis 7199-99]
gi|444893860|emb|CCP43114.1| Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB
protein) (heat shock protein F84.1) [Mycobacterium
tuberculosis H37Rv]
gi|449030887|gb|AGE66314.1| endopeptidase ATP binding protein [Mycobacterium bovis BCG str.
Korea 1168P]
Length = 848
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 117/611 (19%), Positives = 221/611 (36%), Gaps = 104/611 (17%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+ ++ V++ L + K N V++GE +V G+ +I GDVPE+LRD
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
+ L + S + R E E+R++ + + +++ G+ I+ + +L ++ E
Sbjct: 237 IVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQ-IITFIDELHTIVGAGATGEGA-- 293
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMR--------------CKSGHPSL 368
M+ G ++ + L+G T Y + G PS+
Sbjct: 294 ---------MDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSV 344
Query: 369 ETLWSL-----------HPLTIPAGSLSLSLITTDSDLQSQSTSKKA----ESGVSWLLF 413
E + H + I +L + +D + ++ KA + S L
Sbjct: 345 EDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRM 404
Query: 414 EGEEENKQLTCCADCSAKFEAEARSLQSSSCNSDSPTSSLPAWLQQYKNEKKATLSNNDK 473
E + ++ + E E +L S D ++ A L+ ++K L+
Sbjct: 405 EIDSRPVEIDEVERLVRRLEIEEMAL---SKEEDEASAERLAKLRSELADQKEKLA---- 457
Query: 474 DSGVRDLCKKWNSICNSIHKQPYYSERTLTFSSASPSSSTSG---FSYDQQYPNFHKTHR 530
+L +W + N+I E+ S + G + + +Y + +
Sbjct: 458 -----ELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEK 512
Query: 531 DWAVVEPKQSWREHHFLFSHEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSS 590
P+ RE L D S IP + L+ ++
Sbjct: 513 KLDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-------------GETA 559
Query: 591 DIMEMEYVHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKD 650
++ ME + L K+V QK V +++ V + R+G
Sbjct: 560 KLLRME-----------------DELGKRVIGQKAAVTAVSDAVRRSRAGV--------- 593
Query: 651 HSEVKEETWLF-FQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRN 709
S+ T F F G K ++AK LA +F V I +S + +
Sbjct: 594 -SDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAP 652
Query: 710 KRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
++ + EAV P+ V L +++E+A + ++ GR+ G V
Sbjct: 653 PGYVGYEAGG---QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTV 709
Query: 770 SLGDAIVILSC 780
+ I+IL+
Sbjct: 710 DFRNTILILTS 720
>gi|86359337|ref|YP_471229.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|86283439|gb|ABC92502.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
Length = 866
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 27/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q +P HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFSPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + GG+ ++ L F A+ ++ + V+ L+ L I
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVFSTAEEAAKKAG-----DSFVTVERLLQALAIET 119
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
S S ++ AG ++ + Q ++ +I T S+N E L + A
Sbjct: 120 T--ASTSSTLKNAGVTA----QGLNQVIN-DIRKGRTADSANA--EQGFDSLKKYARDLT 170
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 171 GEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVP 230
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 231 ESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|418062922|ref|ZP_12700659.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens DSM
13060]
gi|373563519|gb|EHP89711.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens DSM
13060]
Length = 874
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQS---HSHPLQ 65
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS H+ Q
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQVEQ 66
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQ 123
A P + G+ P + LV F A QA ++ G S ++
Sbjct: 67 WLA----------------KQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVER 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
LLA +E D R++ AG ++ + + + + + N S
Sbjct: 111 LLLAFAVE---------KDGEAGRILTAAGVTAASLNAAIN-------ALRKGRTADNAS 154
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E+ L + A + LDP+ R+E++ I+ L + K N V++GE
Sbjct: 155 AENAYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKT 214
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRG 299
+V G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+
Sbjct: 215 AIVEGLALRIVNGDVPESLKEKSLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQI 274
Query: 300 IVL 302
I+
Sbjct: 275 ILF 277
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 24/219 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
+ ++I++ S + P Q +D +E + G
Sbjct: 715 NTLLIMTSNLGS--EYLVNQPAGQDTDVVRDEVMGVVRG 751
>gi|340052512|emb|CCC46793.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100)
[Trypanosoma vivax Y486]
Length = 867
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 32/300 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T AA+V+++A LA R + + P H+A + L + L +++
Sbjct: 6 ITNAAAAVLQEASALASRYRNGCIHPAHLALALFQEENDLPSLVLRK-----LGAGVVKV 60
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
F ++RLP P P + A+ H+ + LLA
Sbjct: 61 GFMGLVDRLPKQEPPP------NRPNPGVEMTGTLNMAEQHRVQLG-----DTLLA---- 105
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L+ L +++ V+ ++ AG +V+ ++ + ++S ++++ N L
Sbjct: 106 LDHLFLALYSCKEVAEILNAAGAPMKRVEKEIKD------LRRGKKITS-ETQDQNYDCL 158
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
S+ A LDP+ R +++M I L + K N V++GE +V G+
Sbjct: 159 SKYAVDLCAQAESGKLDPVIGRTDEIMRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQ 218
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVP+ L+DV+ L + S R E E+R++ + N V+ GI+L + ++
Sbjct: 219 RIVLGDVPDTLKDVRVFSLDLGSLIAGAKYRGEFEERLKNLLNEVKEN-QEGIILFIDEI 277
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + E L +L L +++ Q + V +++ +++ R+G R
Sbjct: 546 VSKLSQTDRERLLNLPAHLHRRIKGQDEAVKRVSDAIIRARAGLSRPNSP---------T 596
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK +A +F + V I +S + + S +
Sbjct: 597 ASFLFLGPTGVGKTELAKAVASELFDDEKHMVRIDMSEYMEQHSVSRLVGAPPGYVGHED 656
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ E V PH V L ++VE+A + ++ GR+ S G V + I+I
Sbjct: 657 GG---QLTEPVRRRPHTVLLFDEVEKAHASVYNVLLQVLDDGRLTDSHGRTVDFSNTIII 713
Query: 778 LS 779
++
Sbjct: 714 MT 715
>gi|229491315|ref|ZP_04385140.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
gi|229321772|gb|EEN87568.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
Length = 877
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A +A R GH +V H+ ++ GL+ Q+ ++ AL
Sbjct: 6 LTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQDGLVPRLLEQAGAN---VDALRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L+R P + G TI+ L A+ +R L +
Sbjct: 63 DLDRELSRRPKVSGPGATPGQV---TITQRLAKLLDAAEREAKR---------LKDSYVS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ S S RV+ G + + + + + + +TP + ++ E
Sbjct: 111 VEHLVMALSEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQRVTSATPEGAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVSEGRAGK-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR
Sbjct: 224 LAQRIVRGDVPEGLRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGR 277
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ V++ RSG R G F
Sbjct: 558 VARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRPIGSF------ 611
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F S +N V + +S + R+ SR
Sbjct: 612 ------IFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQE---------RHTVSRL 656
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G +
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 717 VDFRNTVIIMTS 728
>gi|440228045|ref|YP_007335136.1| ATP-dependent chaperone ClpB [Rhizobium tropici CIAT 899]
gi|440039556|gb|AGB72590.1| ATP-dependent chaperone ClpB [Rhizobium tropici CIAT 899]
Length = 866
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +G+ Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 LQSAQTNALAQGNQQFTPEHVLKVLLDDDQGMAASLIERAGGD---AKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ-AHQRRG-SIENQQQPLLAVKIELEQLII 137
LP + GG Q +S L F A+ A ++ G S ++ L A+ IE
Sbjct: 71 LPKVS-----GGDGQV-YLSQPLAKVFATAEDAAKKAGDSFVTAERLLQALAIE------ 118
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
S S +++AG + + + +I T S+N E L + A
Sbjct: 119 ---PSASTSASLKKAGVTPVALNQVIN-----DIRKGRTADSANA--EQGFDSLKKYARD 168
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R++++ I+ L + K N V++GE +V G+ +I GD
Sbjct: 169 LTAEAREGRLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGD 228
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L+D K + L + + R E E+R++ + N V+S G I+
Sbjct: 229 VPESLKDKKLMALDMGALIAGAKFRGEFEERLKAVLNEVQSENGEIILF 277
>gi|218530577|ref|YP_002421393.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens CM4]
gi|218522880|gb|ACK83465.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens CM4]
Length = 874
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQS---HSHPLQ 65
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS H+ Q
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQVEQ 66
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQ 123
A P + G+ P + LV F A QA ++ G S ++
Sbjct: 67 WLA----------------KQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVER 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
LLA +E D R++ AG ++ + + + + + N S
Sbjct: 111 LLLAFAVE---------KDGEAGRILTAAGVTAASLNAAIN-------ALRKGRTADNAS 154
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E+ L + A + LDP+ R+E++ I+ L + K N V++GE
Sbjct: 155 AENAYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKT 214
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRG 299
+V G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+
Sbjct: 215 AIVEGLALRIVNGDVPESLKEKSLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQI 274
Query: 300 IVL 302
I+
Sbjct: 275 ILF 277
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 24/219 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
+ ++I++ S + P Q +D +E + G
Sbjct: 715 NTLLIMTSNLGS--EYLVNQPAGQDTDVVRDEVMGVVRG 751
>gi|150006304|ref|YP_001301048.1| endopeptidase Clp ATP-binding subunit B [Bacteroides vulgatus ATCC
8482]
gi|149934728|gb|ABR41426.1| endopeptidase Clp ATP-binding chain B [Bacteroides vulgatus ATCC
8482]
Length = 862
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 133/296 (44%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V+QA+ + + RG + P+H+ +L + + + + L
Sbjct: 6 FTIKSQEAVQQAVNITQARGQQAIEPVHLLAGVLKVGENVTNFIF---QKLGMNAQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG SN + +RA + + E +
Sbjct: 63 VIDKQIDSLPKVS-----GGEPYLSRESNEI---LQRAVQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L+ S V+ ++++AG + +++S + + E + + + +S +
Sbjct: 106 LEAIILALLNVKSTVATILKDAGMTDKELRSAIAELRKGEKVTSQSSEDTYQSLSKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVP+ L++ + L + + + E E+R++ + N V G I+
Sbjct: 219 HRIIRGDVPDNLKNKQIFSLDMGALVAGAKYKGEFEERLKSVVNEVIKAEGSIILF 274
>gi|296268236|ref|YP_003650868.1| ATP-dependent chaperone ClpB [Thermobispora bispora DSM 43833]
gi|296091023|gb|ADG86975.1| ATP-dependent chaperone ClpB [Thermobispora bispora DSM 43833]
Length = 861
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 129/298 (43%), Gaps = 39/298 (13%)
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L RLP + G P+ S L++ A +R +E++ + E L+
Sbjct: 67 LGRLPKAR-----GATVSAPSTSRQLISVLNTAAERAKR--LEDEY-------VSTEHLM 112
Query: 137 ISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTA 195
+ + D V+ ++R+ G ++ + E+ + TP + ++ E + L++ A
Sbjct: 113 VGLASDGGQVAELLRQEGATADALLEAFEKVRGHARVTSETPEDTYQALEKYGVDLTERA 172
Query: 196 SATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEK 253
A K LDP+ R+ ++ VI+ L + K N V++GE VV G+ +I
Sbjct: 173 RAGK-------LDPVIGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVA 225
Query: 254 GDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAE 311
GDVPE L++ + + L + + R E E+R++ + N +++ G+ I+ + +L
Sbjct: 226 GDVPETLKNKRLVALDLGAMVAGAKYRGEFEERLKAVLNEIKASDGQ-IITFIDELHTV- 283
Query: 312 FRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
A ++E M+ G ++ + ++G T Y P+LE
Sbjct: 284 VGAGAAEGA-----------MDAGNMLKPMLARGELRMIGATTLDEYRERIEKDPALE 330
>gi|148260817|ref|YP_001234944.1| ATPase [Acidiphilium cryptum JF-5]
gi|146402498|gb|ABQ31025.1| ATPase AAA-2 domain protein [Acidiphilium cryptum JF-5]
Length = 860
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 47/291 (16%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T A V+ A T+A R H Q+TP H+ L A++GL+R A P +
Sbjct: 6 FTERARGFVQAAQTIAVREYHQQITPEHLLKAFLDDEEGAASGLIRAAG----GDPAAVR 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
+ A+ +LP + G P I+ LV AQ ++ E Q
Sbjct: 62 L---AADAAIGKLP-----KVQGSGAGQPQITPDLVRVLDAAQQMAQKAGDEYVAQ---- 109
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+++++++ + R + AG S+ +E+AV+ +I T S+N +
Sbjct: 110 -----DRVLVALAASGTPAGRALTAAGASA----QALEKAVA-DIRKGRTVTSANAEQTF 159
Query: 187 NVLV-----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
+ L +++ A A K LDP+ R+E++ I+ L + K N V++GE
Sbjct: 160 DALKKYARDVTEAARAQK-------LDPVIGRDEEIRRAIQVLARRTKNNPVLIGEPGVG 212
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+V G+ +I GDVPEAL+ + L L + + R E E+R++ +
Sbjct: 213 KTAIVEGLALRIVNGDVPEALKGKRLLALDLGAMVAGAKYRGEFEERLKAV 263
>gi|86609958|ref|YP_478720.1| ATP-dependent chaperone protein ClpB [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558500|gb|ABD03457.1| ATP-dependent chaperone protein ClpB [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 880
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A S + Q+ +ARR Q+ H+ ++L GL +T ++ P +
Sbjct: 9 FTEKAWSAIVQSQDVARRHQQQQLETEHLLISLLDQEGGLTQTLLQRAGIDPKLVRDKVE 68
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
F +N+ P L + L RA+ ++ + I
Sbjct: 69 SF---INQQPKLARVDQL-------YLGRGLETTLDRAEEFRKEYGDDF---------IS 109
Query: 132 LEQLIISILDDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L + L D V RV+ G + ++K +++ + + P S ++ E
Sbjct: 110 VEHLFLGSLQDERVGKRVLAPLGLTVERLKPVIKEVRGKQRVTDKNPESRYEALERYGRD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R++++ VI+ L + K N V++GE +V G+
Sbjct: 170 LTQAAREGK-------LDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE+L++ + + L + +
Sbjct: 223 QRINRGDVPESLKNRRVIALDMGAL 247
>gi|163851769|ref|YP_001639812.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens PA1]
gi|240138934|ref|YP_002963409.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
gi|163663374|gb|ABY30741.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens PA1]
gi|240008906|gb|ACS40132.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
Length = 874
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQS---HSHPLQ 65
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS H+ Q
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQVEQ 66
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQ 123
A P + G+ P + LV F A QA ++ G S ++
Sbjct: 67 WLA----------------KQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVER 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
LLA +E D R++ AG ++ + + + + + N S
Sbjct: 111 LLLAFAVE---------KDGEAGRILTAAGVTAASLNAAIN-------ALRKGRTADNAS 154
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E+ L + A + LDP+ R+E++ I+ L + K N V++GE
Sbjct: 155 AENAYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKT 214
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRG 299
+V G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+
Sbjct: 215 AIVEGLALRIVNGDVPESLKEKSLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQI 274
Query: 300 IVL 302
I+
Sbjct: 275 ILF 277
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 24/219 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
+ ++I++ S + P Q +D +E + G
Sbjct: 715 NTLLIMTSNLGS--EYLVNQPAGQDTDVVRDEVMGVVRG 751
>gi|399527709|ref|ZP_10767397.1| ATP-dependent chaperone protein ClpB [Actinomyces sp. ICM39]
gi|398361759|gb|EJN45500.1| ATP-dependent chaperone protein ClpB [Actinomyces sp. ICM39]
Length = 870
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 151/363 (41%), Gaps = 42/363 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T +A V A+ A G+ QV P+H+ ++ G+ A + +A+
Sbjct: 5 MTTKAQEAVSSALQAAGAAGNPQVEPIHLLEALIEQREGI---ALSLLEAVGADVRAIGA 61
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL LP++ G SNAL+A + A +R + +Q I
Sbjct: 62 RTRNALVALPSAQ-----GASTGSAQPSNALLAVVR--DAGERAEAAGDQY-------IS 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L+I++ + R++ +AG + + + Q + P++S + S +
Sbjct: 108 TEHLLIALAASQTEAGRILSQAGVDADALTQALAQL-------RPDPITSADPEGSFEAL 160
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
T+V++ LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 161 SKYGRDLTEVAR-EGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD + + L ++S R E E+R++ + + + G+ I+ + +
Sbjct: 220 QRIVAGDVPESLRDKRLVSLDVASMVAGAKYRGEFEERLKAVLSEISRSDGQ-IITFIDE 278
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
L SE M+ G ++ + ++G T Y P
Sbjct: 279 LHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDP 327
Query: 367 SLE 369
+LE
Sbjct: 328 ALE 330
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
K + ++ L + + L K++ QKD V +++ V + R+G R G F
Sbjct: 560 KLLQTETDKLLHMEDELGKRLIGQKDAVRAVSDAVRRSRAGLSDPNRPTGSF-------- 611
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K ++AK LA +F V I +S +S + +
Sbjct: 612 ----LFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYSEKHSVA-----RLVGAPPG 662
Query: 717 SCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
Y + + EAV P+ V L+++VE+AD + ++ GR+ G V +
Sbjct: 663 YVGYEQGGQLTEAVRRRPYSVVLLDEVEKADPEIFDILLQVLDDGRLTDGQGRTVDFRNT 722
Query: 775 IVILSC 780
I+IL+
Sbjct: 723 ILILTS 728
>gi|326404211|ref|YP_004284293.1| chaperone protein ClpB [Acidiphilium multivorum AIU301]
gi|338991920|ref|ZP_08634710.1| Chaperone protein clpB [Acidiphilium sp. PM]
gi|325051073|dbj|BAJ81411.1| chaperone protein ClpB [Acidiphilium multivorum AIU301]
gi|338205148|gb|EGO93494.1| Chaperone protein clpB [Acidiphilium sp. PM]
Length = 860
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 47/291 (16%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCK 67
T A V+ A T+A R H Q+TP H+ L A++GL+R A P +
Sbjct: 6 FTERARGFVQAAQTIAVREYHQQITPEHLLKAFLDDEEGAASGLIRAAG----GDPAAVR 61
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
+ A+ +LP + G P I+ LV AQ ++ E Q
Sbjct: 62 L---AADAAIGKLP-----KVQGSGAGQPQITPDLVRVLDAAQQMAQKAGDEYVAQ---- 109
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+++++++ + R + AG S+ +E+AV+ +I T S+N +
Sbjct: 110 -----DRVLVALAASGTPAGRALTAAGASA----QALEKAVA-DIRKGRTVTSANAEQTF 159
Query: 187 NVLV-----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
+ L +++ A A K LDP+ R+E++ I+ L + K N V++GE
Sbjct: 160 DALKKYARDVTEAARAQK-------LDPVIGRDEEIRRAIQVLARRTKNNPVLIGEPGVG 212
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+V G+ +I GDVPEAL+ + L L + + R E E+R++ +
Sbjct: 213 KTAIVEGLALRIVNGDVPEALKGKRLLALDLGAMVAGAKYRGEFEERLKAV 263
>gi|407697521|ref|YP_006822309.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
dieselolei B5]
gi|407254859|gb|AFT71966.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
dieselolei B5]
Length = 861
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 124/295 (42%), Gaps = 28/295 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + +A +LA + H + P+H+ +L G+ ++ ++P
Sbjct: 6 LTARLQEALGEAQSLAVGQSHNAIEPVHLMLALLQQRGGVATPLLEKAGANPADVIT--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+A+++LP + G Q L+ R +A QR + + LLA
Sbjct: 63 ALKMAMDKLP---TVGQFTGDVQLSQNLGRLLNLADR-EAQQRGDQYISTEAVLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ D+ V ++M+ AG + ++Q E +S + L
Sbjct: 115 ------ACDDNGDVGKLMKNAGVRKAVLAEKIQQVRGGESVDDPNAEDRMESLKKYTTDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 169 TARAESGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L +++ R E E+R++ + N + GR I+
Sbjct: 222 RIVNGEVPEGLKEKRVLSLDMAALIAGAKYRGEFEERLKAVLNELSKQEGRVILF 276
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + AL +V Q + V ++N V + R+G R G F
Sbjct: 551 VSKMLEGEREKLLRMEEALHHRVVGQDEAVEAVSNAVRRSRAGLSDPNRPNGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 605 ------LFLGPTGVGKTELCKALAGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 658
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 659 YEEGGYL---TEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLEDGRLTDGQGRTVDFRNT 715
Query: 775 IVILS 779
+V+++
Sbjct: 716 VVVMT 720
>gi|85373114|ref|YP_457176.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594]
gi|84786197|gb|ABC62379.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594]
Length = 859
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 131/300 (43%), Gaps = 35/300 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T+A R H ++TP H+ M+ G+ ++ +P + +E
Sbjct: 6 FTDRAKGFLQAAQTVAIRMSHQRITPAHLLKAMIEDPEGMASGLIARAGGNP---RTVED 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ AL ++PA + GG Q P + N V +A+ +I ++ V IE
Sbjct: 63 EVDAALGKIPAVSG----GGAQQTPGLDNDTVRILDQAE------TIADKSGDSY-VTIE 111
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV- 190
+ +++ S + ++ A + +++ + E+ T S+N + + +
Sbjct: 112 RLLVALALATTTSAGQALKAANVDAKTLEAEIS-----ELRGGRTADSANAEEAYDAMKK 166
Query: 191 ----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L++ A K LDP+ R+E++ I+ L + K N ++G+ +
Sbjct: 167 YARDLTEAAREGK-------LDPVIGRDEEIRRTIQILARRTKNNPALIGDPGTGKTAIA 219
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP++L+ + L + S R E E+R++ + + V+ G+ I+
Sbjct: 220 EGLALRIANGDVPDSLKGRTLMSLDMGSLIAGAKYRGEFEERLKAVLDEVKGADGQIILF 279
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 87/231 (37%), Gaps = 36/231 (15%)
Query: 566 IPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY-----------VHKFKELNSENLTSLCN 614
IPE L++ L R +T N+ ++ E + + K E + L +
Sbjct: 509 IPE---LEKKLEEARATTENALLKEEVTEDDIASVVSRWTGIPIDKMLEGERDKLLKMEE 565
Query: 615 ALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAKE 671
L K+V Q++ + ++ V + R+G R G F F G K
Sbjct: 566 LLSKRVIGQEEPIIAVSKAVRRARAGLQDPGRPLGSF------------LFLGPTGVGKT 613
Query: 672 KIAKELARLVFGSHNNFVSIALSSFSSTR--ADSTEDSRNKRSRDEQSCSYIERFAEAVS 729
++ K LA +F + V I +S F A DE EAV
Sbjct: 614 ELTKALAGFLFDDDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGV-----LTEAVR 668
Query: 730 NNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
P++V L ++VE+A + ++ GR+ G V + ++IL+
Sbjct: 669 RRPYQVVLFDEVEKAHTDVFNVLLQVLDDGRLTDGQGRVVDFSNTLIILTS 719
>gi|389583709|dbj|GAB66443.1| heat shock protein 101 [Plasmodium cynomolgi strain B]
Length = 907
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 18 SVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVAL 77
+++ +A+R GH+Q+ PLH+ + + + G + L+ +S + L+ + AL
Sbjct: 44 NILNAGKNVAKRYGHSQLKPLHILSALAKSDYG---SNLLKENS--VNASNLKEYIDTAL 98
Query: 78 NRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLII 137
+ A + L A A ++ + K+++E L+
Sbjct: 99 EQTRAGAPLDNKSKIGYSDEVKEVLAEAEALANKYKSQ-------------KVDVEHLLS 145
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
+++D V+ +M E + E+AV + ++ +K +S L L Q S
Sbjct: 146 GLMNDDLVNEIMNEVYLT--------EEAVKGILKNKLEKNKKDKDGKSGGLYLEQFGSN 197
Query: 198 T--KVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
KV ++ R+E++ VIE+L+ K + V+VG+ +V G++ +IEKGD
Sbjct: 198 LNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGD 257
Query: 256 VPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
VP+ LR + L+ F R E E R ++E+KN
Sbjct: 258 VPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKN 298
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 606 SENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGV 665
S+ L N+L K + +D + +++ V+K +G KD E T+LF G
Sbjct: 590 SKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATG-------MKD-PEKPIGTFLFL-GP 640
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIE--- 722
K ++AK LA +F S +N + + +S F+ + S Y+
Sbjct: 641 TGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITG--------SPPGYVGFSD 692
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
+ EAV PH V L +++E+A K + + G I + + + I+I++
Sbjct: 693 SGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSNTIIIMT 751
>gi|422344103|ref|ZP_16425030.1| ATP-dependent chaperone ClpB [Selenomonas noxia F0398]
gi|355377851|gb|EHG25060.1| ATP-dependent chaperone ClpB [Selenomonas noxia F0398]
Length = 857
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 39/291 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACLQSHSHPLQ 65
Q TA + ++ A +A R H ++T HV + GLL T C +
Sbjct: 3 QDKYTARTLAALQSAQQIAAMRYHQEITSAHVLLALAKEPEGLLATIFDVC------GVD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
L+ + R+P+ T LG + +V RA+ + S++++
Sbjct: 57 LPMLKARLEKEIARIPSVRGTNRLG-------MGMDMVRVLGRAEELAK--SMKDEY--- 104
Query: 126 LAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L+++I+ D S V + RE G + + V+ +++ + S + P +S
Sbjct: 105 ----VSTEHLLLAIVTDGSDEVQTIAREFGLTKSAVQEAIQKNRKQNVTSDN-PEEGYQS 159
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L+ A A K LDP+ R+E++ IE L + K N V++GE
Sbjct: 160 LEKYGRDLTAAARANK-------LDPVIGRDEEIRRSIEILSRRTKNNPVLIGEPGVGKT 212
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 213 AIVEGLARRIVAGDVPESLKNKTLYSLDMGALVAGAKFRGEFEERLKGVLN 263
>gi|424925677|ref|ZP_18349038.1| ClpV [Pseudomonas fluorescens R124]
gi|404306837|gb|EJZ60799.1| ClpV [Pseudomonas fluorescens R124]
Length = 885
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 53/239 (22%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+++ +
Sbjct: 94 QDALLVANLELGQTQVEDAALILALLRNP-----MRYAGSRYQPLLAKLNIDRLKEFALS 148
Query: 173 SQSTPVSSNK-SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
Q P ++ K + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QQEQPAANGKPAAQGESLLQRFTHNLTQQAR-EGKLDPVLCRDGAIRQMVDILARRRKNN 207
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR--- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 PIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKG 267
Query: 285 -VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 VIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 326
>gi|456358085|dbj|BAM92530.1| chaperone [Agromonas oligotrophica S58]
Length = 879
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 30/291 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR--GSIENQQQPLLAVKI 130
AL ++P + + G Q +S L AF A+ + S ++ LL + +
Sbjct: 64 TEDALGKMPKVSGS----GAGQV-YLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E + ++ + G ++ + + +E +T ++ + +
Sbjct: 119 E---------KNSEAGSILAKGGVTAQNLNAAIESLRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D + L L + + R E E+R++ + V G
Sbjct: 223 LRIVNGDVPESLKDKRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGAEG 273
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPHRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|387133735|ref|YP_006299707.1| ATP-dependent chaperone protein ClpB [Prevotella intermedia 17]
gi|386376583|gb|AFJ08016.1| ATP-dependent chaperone protein ClpB [Prevotella intermedia 17]
Length = 862
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 118/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A+ LA R + PLH+ ++ ++ H + + +E
Sbjct: 6 FTIKAQEAIQAAVALASRNSQQVIEPLHILAGVMEKGKDVVNYLF---HKSGINLQIVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++RLP + GG F +N ++ + ++ Q + +
Sbjct: 63 AVQNEVSRLPKVS-----GGEPYFSPDANKVMQ------------TTMSESQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++L + + SR++++AG + +++ + + Q V + +S + N
Sbjct: 106 IEPLLLALLTVNSTASRILKDAGCTEQTMRAAITE------LRQGAKVQT-QSGDENYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LSKYARNLVEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE L+D + L + +
Sbjct: 219 GRIIRGDVPENLKDKQLYSLDMGAL 243
>gi|297171552|gb|ADI22550.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF0500_09M11]
Length = 861
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
TA + +A +LA + H+ + P+H+ +L S G+ ++ ++P
Sbjct: 6 FTARLQEALGEAQSLAVGQSHSAIEPVHLLLALLQQSGGVAAPLLEKAGANPADVVT--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
+A+++LP + G Q +S L A + Q+RG +
Sbjct: 63 ALKMAMDKLP---TVGQFNGDVQ---LSQGLARLLNLADREAQQRGD----------QYV 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L+++ DD + ++ + AG + +++ E + ++ +
Sbjct: 107 STEALLLAACDDSGELGKLFKNAGIKKKVLAEKIQEVRGGEAVTDPNAEDKMEALKKYTQ 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTARAESGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L+D + L L +++ R E E+R++ + N + GR I+
Sbjct: 220 AQRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERLKAVLNELSKQEGRIILF 276
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL +V Q + V ++N V + R+G R G F
Sbjct: 551 VSKMLEGERDKLLRMEEALHARVVGQDEAVTAVSNAVRRSRAGLSDPNRPNGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 605 ------LFLGPTGVGKTELCKALAGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 658
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + +E GR+ G V +
Sbjct: 659 YEEGGYL---TEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNT 715
Query: 775 IVILS 779
+V+++
Sbjct: 716 VVVMT 720
>gi|401406059|ref|XP_003882479.1| ATP-dependent Clp protease ATP-binding subunit clpC homolog,
chloroplastic (Precursor), related [Neospora caninum
Liverpool]
gi|325116894|emb|CBZ52447.1| ATP-dependent Clp protease ATP-binding subunit clpC homolog,
chloroplastic (Precursor), related [Neospora caninum
Liverpool]
Length = 1026
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V+K E + + L L +L+ +V Q++ V +AN +++ R+G RR
Sbjct: 623 VNKLTETDRQRLLGLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIG-------- 674
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSS--TRADSTEDSRNKRSRDE 715
T+LF G K ++AK L +F N + + +S +S T A S DE
Sbjct: 675 TFLFL-GSTGVGKTELAKALTVAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYMSHDE 733
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ EAV PH V L +++E A + ++ GR+ G V + +
Sbjct: 734 GG-----QLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCV 788
Query: 776 VI 777
+I
Sbjct: 789 II 790
>gi|254517175|ref|ZP_05129233.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
gi|219674680|gb|EED31048.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
Length = 862
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT S + A +LA R H+Q+ H+ ++ G R ++ ++ AL+
Sbjct: 4 LTNPLQSALADAQSLAVGRDHSQIDSAHLLQALINQQGGSARPLLQRAGAN---IDALQQ 60
Query: 72 CFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
++ LP +++ G P +S L + K+AQ + G + +L +
Sbjct: 61 SLRAVIDALPVVSNST---GEVHVSPDLSRVLNLSDKKAQ---QGGDSFISSELVLQALL 114
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E + +L D V++ +A + + ++V+ A + E S ++ E +
Sbjct: 115 EAGAAVGKVLTDSGVTKAGLDAAVQAVRGGASVDSADAEE---------SRQALEKYTID 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 166 LTERARDGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
++ G+VPE LRD + L L + + R E E+R++ + N + GR I+
Sbjct: 219 QRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERLKALLNELSKEEGRVILF 274
>gi|345011029|ref|YP_004813383.1| ATP-dependent chaperone ClpB [Streptomyces violaceusniger Tu 4113]
gi|345014653|ref|YP_004817007.1| ATP-dependent chaperone ClpB [Streptomyces violaceusniger Tu 4113]
gi|344037378|gb|AEM83103.1| ATP-dependent chaperone ClpB [Streptomyces violaceusniger Tu 4113]
gi|344041002|gb|AEM86727.1| ATP-dependent chaperone ClpB [Streptomyces violaceusniger Tu 4113]
Length = 880
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 29/294 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ ++ A T A+R GH++V H+ +L GL+ Q + P +A+
Sbjct: 6 LTQKSQEALQDAQTRAQRYGHSEVDGEHLLLALLDQPEGLVPRLIGQLGADP---EAVRT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ R P T G ++ L A+ RR E +
Sbjct: 63 MLETEVARKPKVTGPGATPGQV---FVTQRLSQLLDTAEQEARRLKDEY---------VS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ S + RV+ E G + + + + + + P + ++ E
Sbjct: 111 VEHLVLALAEEGSATAAGRVLGEHGVTKEAFLGALTRVRGSQRVTSANPEVAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A + K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVLEARSGK-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ +I +GDVPE LRD L + S R E E+R++ + V S GR
Sbjct: 224 LAQRIVRGDVPEGLRDKTIFALDMGSLVAGAKYRGEFEERLKAVLTEVNSAQGR 277
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L+++V Q + V +++ +++ RSG R G F
Sbjct: 556 VSRLQEGEREKLLRLDEILQERVIGQDEAVKLVSDAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F + N + + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKALAAALFDTEENMIRLDMSEYQE---------RHTVSRL 654
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI + G
Sbjct: 655 VGAPPGYIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQVLDDGRITDAQGRL 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 150/378 (39%), Gaps = 48/378 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T ++ + +A A RR H + P H+ +L GL+ L+ Q EL
Sbjct: 7 TNKSQEALMEAQKEAVRRSHQAIDPEHLLLALLIQENGLI-GRILEREGISSQGIVQEL- 64
Query: 73 FNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+R P + M GG +S LV A E++ + + +
Sbjct: 65 -ERELSRRPKVSGPGMEGGKVYLTQRMSKLLVDA-------------EDEAKGMKDQYVS 110
Query: 132 LEQLIISIL----DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+E L ++IL D PS R+++ + + + + + P + ++ E
Sbjct: 111 VEHLFLAILKEAGDSPS-KRILKTFNVDRERFLKALAEVRGGQRVTSQDPEDTYEALEKY 169
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L + A K LDP+ R+E++ VI L K K N V++GE +
Sbjct: 170 GRDLVKMAKEGK-------LDPVIGRDEEIRRVIRILSRKTKNNPVLIGEPGVGKTAIAE 222
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I KGDVPE L+D L + S R E E+R++ + + ++ GR I+L
Sbjct: 223 GLAQRILKGDVPEGLKDKTVFALDMGSLIAGAKFRGEFEERLKSVLSEIKRSDGR-IILF 281
Query: 304 LGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKS 363
+ +L A +E M+ G ++ + +G T Y +
Sbjct: 282 IDELHTV-VGAGKAEGA-----------MDAGNMLKPMLARGELRCIGATTLDEYRKYIE 329
Query: 364 GHPSLETLWSLHPLTIPA 381
P+LE + P+ + A
Sbjct: 330 KDPALERRF--QPVLVEA 345
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 22/201 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + +E + L L L K+V Q + V ++ VL+ R+G R G F
Sbjct: 556 VSRIQEGERDKLLRLEEILHKRVVGQDEAVRLVSEAVLRARAGIKDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F S +N + I +S + + S
Sbjct: 610 ------LFLGPTGVGKTELAKALAEALFDSEDNMIRIDMSEYMEKHSVS-----RLIGAP 658
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + E V P+ V L ++VE+A + ++ GR+ S G V
Sbjct: 659 PGYVGYDEGGQLTEQVRRKPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGKTVDFK 718
Query: 773 DAIVILSCESFSSRSRACSPP 793
+ ++IL+ S C+ P
Sbjct: 719 NCVIILTSNVGSQHLSRCTDP 739
>gi|365825592|ref|ZP_09367546.1| ATP-dependent chaperone ClpB [Actinomyces graevenitzii C83]
gi|365258050|gb|EHM88071.1| ATP-dependent chaperone ClpB [Actinomyces graevenitzii C83]
Length = 882
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 146/362 (40%), Gaps = 40/362 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T ++ + A+ A G+ QV LH+ +L+ G+ L + P K +
Sbjct: 6 TTKSQEAISGAVQAAAAAGNPQVEALHLLGELLSQEGGV--AVGLLNALSPQTLKNVGTA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL LP+S G P S +AA ++A + + L I
Sbjct: 64 TRTALTSLPSSA-----GSSVVEPNPSRGFLAALEKA---------DKLAKELTDEYIST 109
Query: 133 EQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
E ++I+I + + ++ Q + V + + + P + ++ + L
Sbjct: 110 EHILIAIAEGDDAAARALRDAGATAQALREILPTVRGGQRVTSANPEGTFEALKKYGTDL 169
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A A K LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 170 TEAARAGK-------LDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+LR+ + + L +SS R E E+R++ + N +++ G +V + +L
Sbjct: 223 RIVAGDVPESLRNKRLISLDLSSMVAGAKYRGEFEERLKAVLNEIKNSDGE-VVTFIDEL 281
Query: 308 EWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPS 367
SE M+ G ++ + ++G T Y P+
Sbjct: 282 HTMVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDPA 330
Query: 368 LE 369
LE
Sbjct: 331 LE 332
>gi|254561541|ref|YP_003068636.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
gi|254268819|emb|CAX24780.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
Length = 874
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQS---HSHPLQ 65
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS H+ Q
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQIEQ 66
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQ 123
A P + G+ P + LV F A QA ++ G S ++
Sbjct: 67 WLA----------------KQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVER 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
LLA +E D R++ AG ++ + + + + + N S
Sbjct: 111 LLLAFAVE---------KDGEAGRILTAAGVTAASLNAAIN-------ALRKGRTADNAS 154
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E+ L + A + LDP+ R+E++ I+ L + K N V++GE
Sbjct: 155 AENAYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKT 214
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRG 299
+V G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+
Sbjct: 215 AIVEGLALRIVNGDVPESLKEKSLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQI 274
Query: 300 IVL 302
I+
Sbjct: 275 ILF 277
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 24/219 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEG 811
+ ++I++ S + P Q +D +E + G
Sbjct: 715 NTLLIMTSNLGS--EYLVNQPAGQDTDVVRDEVMGVVRG 751
>gi|354603878|ref|ZP_09021871.1| chaperone ClpB [Alistipes indistinctus YIT 12060]
gi|353348310|gb|EHB92582.1| chaperone ClpB [Alistipes indistinctus YIT 12060]
Length = 863
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAA--STGLLRTACLQSHSHPLQCKAL 69
LT +A ++ AM+LA G V PLH+ + ++ S G+ LQ + AL
Sbjct: 6 LTIQAQEALQNAMSLATSHGQQAVEPLHILDAIVTEDDSVGVY---LLQKLG--VNINAL 60
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L+RLP + GG F S ++A Q+ G + A
Sbjct: 61 RSVLKQELDRLPKVS-----GGDPYFSRES---------SEAIQKAGDFTREFNDKYA-- 104
Query: 130 IELEQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++ IL + + R++++AG ++ + +++ + + + S ++ E
Sbjct: 105 -SVEHLLLGILSEKGTAGRLLKDAGVKEKEMIAAIKE------LRKGSTIDS-QTNEQTF 156
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L + A + LDP+ R+E++ V++ L + K N ++VGE + G
Sbjct: 157 DALGKYAINLNEQARKGKLDPVIGRDEEIRRVLQILSRRTKNNPILVGEPGVGKTAIAEG 216
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF 273
+ +I GDVP+ LR + L + +
Sbjct: 217 IAHRIIDGDVPDNLRSKQIFSLDMGAL 243
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 77/203 (37%), Gaps = 38/203 (18%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQ 663
E L + + L ++V Q + IAN V + R+G R G F F
Sbjct: 555 EKLLQMESVLHERVIGQDKAIEAIANAVRRSRAGLQDARRPIGSF------------IFL 602
Query: 664 GVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR----DEQSCS 719
G K ++AK LA +F I +S + R+ SR
Sbjct: 603 GTTGVGKTELAKALAEYLFNDDTMMTRIDMSEYQ---------ERHSVSRLIGAPPGYVG 653
Query: 720 YIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y E + EAV P+ V L++++E+A + ++ GR+ + G V + I+I
Sbjct: 654 YDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFRNTIII 713
Query: 778 LS--------CESFSSRSRACSP 792
++ E+FS P
Sbjct: 714 MTSNIGSPIIVENFSKYHNETPP 736
>gi|354596494|ref|ZP_09014511.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
gi|353674429|gb|EHD20462.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
Length = 857
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
LT++ + A +LA R H + PLH+ + +L + G L TA + +H
Sbjct: 6 LTSKFQLALADAQSLALGRDHQFIEPLHLMSALLNQEGGTVGPLLTAAGVNVAH------ 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKR-AQAHQRRGSIENQQQPLLA 127
L+ + A+ RLP T GG Q P S+ LV + Q+RG
Sbjct: 60 LKNEVDQAIIRLPQVEGT---GGDVQ-P--SSELVRTLNVCDKLAQKRGD---------- 103
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I E ++++L+ S +S V++ AG + V ++Q E + ++ +
Sbjct: 104 TFISSELFVLAVLESRSTLSDVLKRAGATPESVTKAIDQIRGGEQVNDQGAEDQRQALKK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 YTIDLTERAEQGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I G+VPE L++ + L L + S
Sbjct: 217 EGLALRIVNGEVPEGLKNKRVLSLDMGSL 245
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 26/203 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + AL ++V Q + V +AN++ + R+G R G F
Sbjct: 548 VSRMLESEREKLLRMEEALHQRVIGQDEAVEAVANSIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L++++E+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC--------ESFSSRSRA 789
+VI++ E F RS A
Sbjct: 713 VVIMTSNLGSDLIQERFGERSYA 735
>gi|325972680|ref|YP_004248871.1| ATP-dependent chaperone ClpB [Sphaerochaeta globus str. Buddy]
gi|324027918|gb|ADY14677.1| ATP-dependent chaperone ClpB [Sphaerochaeta globus str. Buddy]
Length = 857
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 37/304 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
+T + + A LA G+A++T H+ +L GLL L+ PL K ++
Sbjct: 6 MTIKLRQALSDADVLANEHGNAEITTEHLILALLDQKEGLL-PPLLERLGVPL--KQVKE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+NRLP + G + Q + + L AA K A E + Q L A
Sbjct: 63 KIEDLVNRLPKA-----YGSNVQRSLSAQLGSELYAADKVAA--------EFKDQYLSA- 108
Query: 129 KIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
E ++++ILDD S S+ ++ G + V ++ + P S ++ E
Sbjct: 109 ----EHVLLAILDDGSQASKTLKALGLTKDAVMQALQSIRGNQSIQSEDPESRYQALEKY 164
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
++ A K LDP+ R+E++ +++ L K K N V++GE +V
Sbjct: 165 CRDMTTLARQGK-------LDPVIGRDEEIRRLMQVLSRKTKNNPVLIGEPGVGKTAIVE 217
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I GDVPE+L+ + L L + S R E E+R++ + V S G I+L
Sbjct: 218 GLALRIASGDVPESLKGKRLLSLDVGSLVAGAKYRGEFEERLKAVVKEVTSSEG-AIILF 276
Query: 304 LGDL 307
+ +L
Sbjct: 277 IDEL 280
>gi|345863973|ref|ZP_08816179.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124880|gb|EGW54754.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 40/289 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + A +LA R H + PLH+ + +L G +R Q+ ++
Sbjct: 6 LTSKFQMALADAQSLAVGRDHQFIEPLHLMSALLDQEGGTVRHLLAQA----------DV 55
Query: 72 CFNVALNRLPASTS-TPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK- 129
N+ + L A+T P + G ISN L G + NQ L +
Sbjct: 56 NINLLRSDLSAATERLPSVEGAAGDLHISNDL-------------GRLLNQTDKLAQQRK 102
Query: 130 ---IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
I E +++ +DD + ++R+AG + V+ +++ + ++ E
Sbjct: 103 DQYISSELFVLAAVDDKGELGEILRKAGANKRAVEQVIDKVRGGQSVDDPNAEDQRQALE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A K LDP+ R++++ I+ L + K N V++GE +
Sbjct: 163 KYTIDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
V G+ +I G+VPE L+ + L L + + R E E+R++ + N
Sbjct: 216 VEGLAQRIINGEVPEGLKSKRLLSLDMGALIAGAKFRGEFEERLKGVLN 264
>gi|265756195|ref|ZP_06090524.1| ATP-dependent chaperone ClpB [Bacteroides sp. 3_1_33FAA]
gi|345516500|ref|ZP_08795990.1| chaperone ClpB [Bacteroides dorei 5_1_36/D4]
gi|423232186|ref|ZP_17218588.1| chaperone ClpB [Bacteroides dorei CL02T00C15]
gi|423246737|ref|ZP_17227790.1| chaperone ClpB [Bacteroides dorei CL02T12C06]
gi|229436999|gb|EEO47076.1| chaperone ClpB [Bacteroides dorei 5_1_36/D4]
gi|263233786|gb|EEZ19395.1| ATP-dependent chaperone ClpB [Bacteroides sp. 3_1_33FAA]
gi|392625250|gb|EIY19321.1| chaperone ClpB [Bacteroides dorei CL02T00C15]
gi|392634713|gb|EIY28627.1| chaperone ClpB [Bacteroides dorei CL02T12C06]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 133/296 (44%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V+QA+ + + RG + P+H+ +L + + + + L
Sbjct: 6 FTIKSQEAVQQAVNVTQARGQQAIEPVHLLAGVLKVGENVTNFIF---QKLGMNAQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG SN + +RA + + E +
Sbjct: 63 VIDKQIDSLPKVS-----GGEPYLSRESNEI---LQRAVQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L+ S V+ ++++AG + +++S + + E + + + +S +
Sbjct: 106 LEAIILALLNVKSTVATILKDAGMTDKELRSAIAELRKGEKVTSQSSEDTYQSLSKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVP+ L++ + L + + + E E+R++ + N V G I+
Sbjct: 219 HRIIRGDVPDNLKNKQIFSLDMGALVAGAKYKGEFEERLKSVVNEVVKAEGSIILF 274
>gi|212691841|ref|ZP_03299969.1| hypothetical protein BACDOR_01336 [Bacteroides dorei DSM 17855]
gi|237708047|ref|ZP_04538528.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 9_1_42FAA]
gi|423241999|ref|ZP_17223110.1| chaperone ClpB [Bacteroides dorei CL03T12C01]
gi|212665597|gb|EEB26169.1| ATP-dependent chaperone protein ClpB [Bacteroides dorei DSM 17855]
gi|229457875|gb|EEO63596.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 9_1_42FAA]
gi|392640228|gb|EIY34033.1| chaperone ClpB [Bacteroides dorei CL03T12C01]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 133/296 (44%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V+QA+ + + RG + P+H+ +L + + + + L
Sbjct: 6 FTIKSQEAVQQAVNVTQARGQQAIEPVHLLAGVLKVGENVTNFIF---QKLGMNAQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG SN + +RA + + E +
Sbjct: 63 VIDKQIDSLPKVS-----GGEPYLSRESNEI---LQRAVQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L+ S V+ ++++AG + +++S + + E + + + +S +
Sbjct: 106 LEAIILALLNVKSTVATILKDAGMTDKELRSAIAELRKGEKVTSQSSEDTYQSLSKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVP+ L++ + L + + + E E+R++ + N V G I+
Sbjct: 219 HRIIRGDVPDNLKNKQIFSLDMGALVAGAKYKGEFEERLKSVVNEVVKAEGSIILF 274
>gi|430807090|ref|ZP_19434205.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
sp. HMR-1]
gi|429500631|gb|EKZ98994.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
sp. HMR-1]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 128/296 (43%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + +A +LA + + P H+ +LA G RT ++ + L+
Sbjct: 6 LTTRFQEALAEAQSLALGNDNQYIEPQHLLRALLAQDDGAARTLLSRAG---VNVGGLQS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A++RLP T Q N L+ A ++ +I+ Q + +
Sbjct: 63 ALDAAIHRLPQVQGT----NEVQVGRDLNNLLNATEKE-------AIKRNDQFIAS---- 107
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ RE G +++ + + + + S ++ + +
Sbjct: 108 -ELFLLAVSDDKGETGRIARENGLLRKSLEAAITAVRGGDTVNSADAESQREALKKYTVD 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTERARAGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L ++ R E E+R++ + N V G+ IV
Sbjct: 220 QRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVF 275
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VAKMMQGEREKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGL---------SDENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K L+ +F S + + I +S F + S
Sbjct: 602 GSFLFLGPTGVGKTELCKALSEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYAVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|154488139|ref|ZP_02029256.1| hypothetical protein BIFADO_01710 [Bifidobacterium adolescentis
L2-32]
gi|154083612|gb|EDN82657.1| ATP-dependent chaperone protein ClpB [Bifidobacterium adolescentis
L2-32]
Length = 909
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 152/375 (40%), Gaps = 56/375 (14%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+ QV LH+ + ML + R A +++ Q
Sbjct: 5 MEQKFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMAR-ALIEAAGGNAQNV 63
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLL 126
+ E+ + A+ LP+++ G P +S L A +A+ QRRG
Sbjct: 64 SAEV--HQAMQSLPSAS-----GSTTTQPDVSRQLSAVLSQAEKEMQRRGD--------E 108
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
V ++L + I+ + ++ + G ++ ++++ +L S ++ E
Sbjct: 109 YVTVDLMLVAIAAAKPNQSADILEKNGLTADKLRN------ALTAARGSDRKVTSADAEG 162
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L + ++ + LDP+ R++++ VI+ L + K N V++GE VV
Sbjct: 163 SYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVV 222
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP L++ K + L + S + R E E+R++ + ++ G
Sbjct: 223 EGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIKKADG----- 277
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHII--------MEIGKLVCGIGENARFWLMGIAT 354
Q+ + I I+ M+ G ++ + L+G T
Sbjct: 278 ----------------QIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATT 321
Query: 355 FQSYMRCKSGHPSLE 369
Y P+LE
Sbjct: 322 LDEYRENIEKDPALE 336
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + L K+V QK+ + +++ V + R+G R G F
Sbjct: 576 VGRLMQGENEKLLHMEEYLGKRVIGQKEAIQAVSDAVRRSRAGISDPNRPTGSF------ 629
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 630 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 676
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 677 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 735
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 736 DFKNTILIMTS 746
>gi|225156853|ref|ZP_03724956.1| ATP-dependent chaperone ClpB [Diplosphaera colitermitum TAV2]
gi|224802799|gb|EEG21049.1| ATP-dependent chaperone ClpB [Diplosphaera colitermitum TAV2]
Length = 870
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 132/298 (44%), Gaps = 37/298 (12%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A + ARRR + +V H+ + +LA G++ A ++ L AL+L N L+R
Sbjct: 14 ITDAQSEARRRNNNEVETWHLLHALLAQENGIV-PAIVEKLG--LTTPALQLAANRELDR 70
Query: 80 LP---ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
LP S T + ++ A+ RA E + + L + +E L
Sbjct: 71 LPRVSGSVDTSKI-------YVTQAVNEVLTRA---------EEEAKQLTDEFVSVEHLF 114
Query: 137 ISILD---DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQ 193
+++++ ++++ +R V + + + + P ++ + + + L +
Sbjct: 115 LALVEVAKPDALAKYLRSFNIDRRAVLKTLRELRGAQRVTSDNPEATYNALKKYGIDLVE 174
Query: 194 TASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKI 251
A K +DP+ R++++ I L K K N V++GE +V G+ +I
Sbjct: 175 QAKKGK-------MDPVIGRDDEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 227
Query: 252 EKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+GDVPE L+D L + + R E E+R++ + N V+ GR I+L + +L
Sbjct: 228 VRGDVPEGLKDKTIFSLDMGALVAGAKYRGEFEERLKAVLNEVKQSDGR-ILLFIDEL 284
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 24/189 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E L L + L ++V Q + V + +L+ R+G R G F
Sbjct: 555 VTRLVESEKAKLLRLGDTLHERVIGQDEAVQLTSEAILRARAGIKDPRRPVGSF------ 608
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKR-SR 713
F G K ++AK LA +F S + + +S + S NK
Sbjct: 609 ------LFLGPTGVGKTELAKTLAETLFDSEAAMIRLDMSEYMEP------ISVNKLIGA 656
Query: 714 DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
Y E + EAV P+ V L +++E+A + + ++ GR+ G V
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYAVILFDEIEKAHHDVFNALLQVLDDGRLTDGQGRTVDF 716
Query: 772 GDAIVILSC 780
+ ++I++
Sbjct: 717 KNTVIIMTS 725
>gi|424886543|ref|ZP_18310151.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175894|gb|EJC75936.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 866
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 43/295 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q +P HV +L G+ + ++ P KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFSPEHVLKVLLDDDQGMAASLIERAGGDP---KAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG+ ++ L A+ ++ S ++ L A+ IE
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTF 124
Query: 138 SILDDPSVS-----RVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
S L + V+ +V+ + T SN EQ SL+ ++ + + K
Sbjct: 125 STLKNSGVTAQGLNQVINDIRKGRTADSSNAEQGFDSLKKFARDLTAEAREGK------- 177
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 178 ---------------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 223 RIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|302345323|ref|YP_003813676.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
ATCC 25845]
gi|302149089|gb|ADK95351.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
ATCC 25845]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ +A+R G + P+H+ ++ ++ + +A+E
Sbjct: 6 FTIKAQEAVQSAINIAQRNGQQTIEPVHILAGVMDKGKDVINYVF---QKIGVNAQAVET 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ LP + GG + +N Q QR +IE Q+ + +
Sbjct: 63 TIQNEMSHLPKVS-----GGEPYLSSETN---------QVMQR--TIETSQK-MGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++++L + + SR++++AG + E ++ Q V S +S + N
Sbjct: 106 IEPMLLALLAVNSTASRILKDAGCTEK------EMTAAINDLRQGQKVQS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LQKYARNLIEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAM 243
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +A+ V + R+G K K F G
Sbjct: 555 DKLLHLEDELHKRVIGQDEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS TR Y E
Sbjct: 606 GTGKTELAKALADYLFNDESMMTRIDMSEYQEKFSVTRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ G + + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGHLTDNKGRTVNFKNTIIIMTS 716
>gi|23098336|ref|NP_691802.1| ATP-dependent Clp proteinase [Oceanobacillus iheyensis HTE831]
gi|22776562|dbj|BAC12837.1| ATP-dependent Clp proteinase (ClpE) [Oceanobacillus iheyensis
HTE831]
Length = 712
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V K ++ E + +L + L +KV Q + V +A + + R+G R G F
Sbjct: 403 VTKMQKDEQEKMKNLSDQLSQKVIGQNEAVQKVAKAIRRSRAGLKAKQRPIGSF------ 456
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS-TEDSRNKRSR 713
F G K ++ K LA +FGS ++ V + +S + A S S
Sbjct: 457 ------LFVGPTGVGKTELTKVLAEELFGSRDSMVRLDMSEYMEKHAVSKIIGSPPGYVG 510
Query: 714 DEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGD 773
E++ ER + NP+ + L++++E+A Q F + +E G++ S G +VS D
Sbjct: 511 HEEAGQLTER----IRRNPYSILLLDEIEKAHPDVQNMFLQIMEDGQLTDSQGRKVSFKD 566
Query: 774 AIVILSCES 782
++I++ +
Sbjct: 567 TVIIMTSNA 575
>gi|344340643|ref|ZP_08771567.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
gi|343799324|gb|EGV17274.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
Length = 864
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 30/284 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA+ + A +LA R H + PLH+ +L G +R ++ + L
Sbjct: 6 LTAKFQMALADAQSLAVGRDHQFIEPLHLMIALLDQEGGSVRHLLTRAD---VNVNRLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+RLP GG N L+ + A QR I
Sbjct: 63 ALGEQLDRLPTVEGA---GGDVHVGNDLNRLLNQTDKL-AQQRSDQY-----------IS 107
Query: 132 LEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E +++ L+D ++ MREAG S ++ +E + + ++ E +
Sbjct: 108 SELFVLAALEDRGALGSAMREAGASKGAIEKAIEGVRGGQSVNDPNAEEQRQALEKFTID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
+++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 MTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VPE L+ + L L +++ R E E+R++ + N
Sbjct: 221 QRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERLKAVLN 264
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E + L + +EK+V Q + V +++ + + R+G R G F
Sbjct: 548 VSRMLEGERDKLLRMEQEIEKRVVGQAEAVRAVSDAIRRSRAGLSDPGRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EA+ P+ + L+++VE+A + ++ GR+ G V +A
Sbjct: 656 YEEGGYL---TEAIRRRPYSLILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNA 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|430811852|emb|CCJ30708.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1944
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 30/282 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAST-GLLRTACLQSHSHPLQCKALE 70
T + + + +LA+ GH+Q+TP+H+A T+L LLR +S E
Sbjct: 5 FTDKTEKTISDSYSLAQSHGHSQLTPIHIALTLLMEENPQLLRVIIEKSGG---DVSKFE 61
Query: 71 LCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L R+P P + ++S + + A Q+R Q+ +A
Sbjct: 62 RDVRRLLVRMPVQEPAP------ENVSLSPQCMKMLRTAHELQKR-----QRDVYMAQ-- 108
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ LI ++ +DP++ ++ E G +S + +++ + +KS ES
Sbjct: 109 --DHLISALSEDPAIKAILSEMGITSQLLDQAIQKV-------RGNHRIESKSAESGFDS 159
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ +LDP+ R +++ I L + K N V++GE V+ G+
Sbjct: 160 LSKYTVDLTEQARNGTLDPVIGREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSVIEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEI 288
+I DVP L K L L + + + R E E+R++ +
Sbjct: 220 QRIVNSDVPSNLLTCKLLSLDVGALVAGSKFRGEFEERIKSV 261
>gi|366085658|ref|ZP_09452143.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus zeae
KCTC 3804]
Length = 699
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V + K L +L + LEK V Q + V +A + + R G T R G F
Sbjct: 378 VGELKAQEQAQLKNLASDLEKHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGSF------ 431
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNK 710
F G K ++AK+LA+ +FGS + + +S FS ++ +
Sbjct: 432 ------LFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPG--- 482
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E V NP+ + L++++E+A F + ++ GR+ S G
Sbjct: 483 ------YVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRT 536
Query: 769 VSLGDAIVILSCESFSSRSRA 789
VS D I+I++ + S+ + A
Sbjct: 537 VSFKDTIIIMTSNAGSTDAEA 557
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R++++ VIE L + K N V++GE VV G+ KI GDVP L+D
Sbjct: 76 IDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIANGDVPAKLQDRH 135
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEI 288
+ L + S R + EQR++++
Sbjct: 136 VIRLDVVSLVQGTGIRGQFEQRMQQL 161
>gi|294776288|ref|ZP_06741772.1| ATP-dependent chaperone protein ClpB [Bacteroides vulgatus PC510]
gi|319641439|ref|ZP_07996131.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 3_1_40A]
gi|345520331|ref|ZP_08799727.1| chaperone ClpB [Bacteroides sp. 4_3_47FAA]
gi|423314457|ref|ZP_17292391.1| chaperone ClpB [Bacteroides vulgatus CL09T03C04]
gi|254836680|gb|EET16989.1| chaperone ClpB [Bacteroides sp. 4_3_47FAA]
gi|294449875|gb|EFG18391.1| ATP-dependent chaperone protein ClpB [Bacteroides vulgatus PC510]
gi|317386958|gb|EFV67845.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 3_1_40A]
gi|392682272|gb|EIY75618.1| chaperone ClpB [Bacteroides vulgatus CL09T03C04]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 133/296 (44%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V+QA+ + + RG + P+H+ +L + + + + L
Sbjct: 6 FTIKSQEAVQQAVNVTQARGQQAIEPVHLLAGVLKVGENVTNFIF---QKLGMNAQQIAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG SN + +RA + + E +
Sbjct: 63 VIDKQIDSLPKVS-----GGEPYLSRESNEI---LQRAVQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +I+++L+ S V+ ++++AG + +++S + + E + + + +S +
Sbjct: 106 LEAIILALLNVKSTVATILKDAGMTDKELRSAIAELRKGEKVTSQSSEDTYQSLSKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVP+ L++ + L + + + E E+R++ + N V G I+
Sbjct: 219 HRIIRGDVPDNLKNKQIFSLDMGALVAGAKYKGEFEERLKSVVNEVIKAEGSIILF 274
>gi|113953637|ref|YP_731101.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CC9311]
gi|113880988|gb|ABI45946.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CC9311]
Length = 863
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML---AASTGLLRTACLQSHSHPLQCKA 68
T +A S + A LA+ R H Q+ H+ +L + +L A + S A
Sbjct: 8 FTEKAWSAITSAQQLAQNRRHQQLESEHLLRALLDQEGLAGRILDKAGVSS-------TA 60
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
L+ + L++ PA ++ P F + L A RA E +Q
Sbjct: 61 LQTSVDTFLSQQPALSNAP----DSVF--LGKGLNALLDRA---------ETLKQSYGDS 105
Query: 129 KIELEQLIISILDDPSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I +E L++++ DD R ++ +AG ++++K+ + + + P + +S E
Sbjct: 106 FISIEHLLLALADDGRCGRQLLSQAGTDTSRLKTAINAVRGSQKVTDQNPEGTYESLEKY 165
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L+ A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 166 GRDLTSAAREGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVE 218
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP+AL++ + + L + + R E E+R++ + V + G+ IVL
Sbjct: 219 GLAQRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTNSEGQ-IVL 276
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L L + L ++V Q V +A+ + + R+G D ++
Sbjct: 554 VAKLVQSEMEKLLKLEDQLHQRVVGQNQAVTAVADAIQRSRAG-------LSDPNQ-PIA 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
++LF G K +++K LA +F S + V I +S + S ++
Sbjct: 606 SFLFL-GPTGVGKTELSKALAAQLFDSEDALVRIDMSEYMEKHTVSRLIGAPPGYVGYEA 664
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EAV P+ V L ++VE+A + ++ GR+ G V +A++I
Sbjct: 665 GG---QLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLI 721
Query: 778 LSC 780
L+
Sbjct: 722 LTS 724
>gi|352094640|ref|ZP_08955811.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8016]
gi|351680980|gb|EHA64112.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8016]
Length = 863
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A S + A LA+ R H + H+ +L GL ++ P AL+
Sbjct: 8 FTEKAWSAIMSAQQLAQNRRHQHLESEHLLRALLD-QEGLAGRILDKAGVSP---PALQT 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L++ P+ T+ P F + L A RA E +Q I
Sbjct: 64 AVDTYLSQQPSLTNAP----DSVF--LGKGLNALLDRA---------ETLKQSFGDSFIS 108
Query: 132 LEQLIISILDDPSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++ DD R + +AG S+++K+ + + + P + +S E
Sbjct: 109 IEHLLLALADDGRCGRQLFSQAGTDSSRLKTAINAVRGSQKVTDQNPEGTYESLEKYGRD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 169 LTSAARDGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP+AL++ + + L + + R E E+R++ + V + G+ IVL
Sbjct: 222 QRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTNSEGQ-IVL 276
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L L + L ++V Q V +A+ + + R+G D ++
Sbjct: 554 VAKLVQSEMEKLLKLEDQLHERVVGQDQAVTAVADAIQRSRAG-------LSDPNQ-PIA 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
++LF G K +++K LA +F S + V I +S + S ++
Sbjct: 606 SFLFL-GPTGVGKTELSKALAAQLFDSEDALVRIDMSEYMEKHTVSRLIGAPPGYVGYEA 664
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EA+ P+ V L ++VE+A + ++ GR+ G V +A++I
Sbjct: 665 GG---QLTEAIRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLI 721
Query: 778 LSC 780
L+
Sbjct: 722 LTS 724
>gi|406885847|gb|EKD32960.1| hypothetical protein ACD_76C00106G0001 [uncultured bacterium]
Length = 884
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 34/299 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + ++ A +A G + P+H+ +L+ ++ T L+ + +L
Sbjct: 6 FTHRSQEALQHAHNIAVEGGQQALEPIHLLAALLSQEESIVLTIF-----DKLEVEFDDL 60
Query: 72 CFNV--ALNRLPASTSTPMLGGHCQFPTIS--NALVAAFKRAQAHQRRGSIENQQQPLLA 127
+ L+ LP ++ GG Q N ++AA AH+ S +++
Sbjct: 61 ADEIDHILHDLPKTSGG--FGGFAQMYVSQRMNRVLAA-----AHRIAKSFKDEY----- 108
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E L++ +L DP + R++ E G + ++ + P E+
Sbjct: 109 --ISTEHLLLGLLADPDIRRLLEEFGAREDDILKVLKDIRGNQKVDSPEP-------ENK 159
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
VL++ ++ LDPI R+ ++ +++ L + K N V++GE VV
Sbjct: 160 YQVLAKYSTNLTDMARNEKLDPIIGRDAEIRRLMQVLSRRTKNNPVLIGEAGVGKTAVVE 219
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +GDVPE+L+D + + + I S R E E R++ ++ GR I+
Sbjct: 220 GLAQRIAQGDVPESLKDKELISMDIGSMVAGTKYRGEFEDRLKAFLKEIKEADGRMILF 278
>gi|260912598|ref|ZP_05919127.1| chaperone ClpB [Prevotella sp. oral taxon 472 str. F0295]
gi|429738465|ref|ZP_19272273.1| ATP-dependent chaperone protein ClpB [Prevotella saccharolytica
F0055]
gi|260633276|gb|EEX51437.1| chaperone ClpB [Prevotella sp. oral taxon 472 str. F0295]
gi|429160188|gb|EKY02664.1| ATP-dependent chaperone protein ClpB [Prevotella saccharolytica
F0055]
Length = 862
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 32/265 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A V++A+ +A+R G + P+H+ +L + + + + +Q L
Sbjct: 7 TIKAQETVQEAVNIAQRAGQQSIEPVHLLKALLEKAADVTNYIFQKLGVNAMQVSTLA-- 64
Query: 73 FNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N + LP P L +N L+ A E+ + L +
Sbjct: 65 -NSEVEHLPRVEGGKPYLSNEA-----NNVLLKA-------------EDLSKSLGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L +++L + S +R++++AG + ++ ++E Q V S +S + N
Sbjct: 106 VEPLFLALLAVNSSAARILKDAGCTEKDARA------AIEALRQGQQVKS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R++++ V++ L + K N +++GE +V G+
Sbjct: 159 LEKYAKNLVEDARNGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAL 243
>gi|119026482|ref|YP_910327.1| chaperone clpB [Bifidobacterium adolescentis ATCC 15703]
gi|118766066|dbj|BAF40245.1| chaperone clpB [Bifidobacterium adolescentis ATCC 15703]
Length = 905
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 154/367 (41%), Gaps = 40/367 (10%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+ QV LH+ + ML + R A +++ Q
Sbjct: 1 MEQKFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMAR-ALIEAAGGNAQNV 59
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLL 126
+ E+ + A+ LP+++ G P +S L A +A+ QRRG
Sbjct: 60 SAEV--HQAMQSLPSAS-----GSTTTQPDVSRQLSAVLSQAEKEMQRRGD--------E 104
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
V ++L + I+ + ++ + G ++ ++++ +L S ++ E
Sbjct: 105 YVTVDLMLVAIAAAKPNQSADILEKNGLTADKLRN------ALTAARGSDRKVTSADAEG 158
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L + ++ + LDP+ R++++ VI+ L + K N V++GE VV
Sbjct: 159 SYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVV 218
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVP L++ K + L + S + R E E+R++ + ++ G+ ++
Sbjct: 219 EGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQ--II 276
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
D A ++E M+ G ++ + L+G T Y
Sbjct: 277 TFIDEIHTIVGAGAAEGS-----------MDAGNMLKPMLARGELRLIGATTLDEYRENI 325
Query: 363 SGHPSLE 369
P+LE
Sbjct: 326 EKDPALE 332
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L + L K+V QK+ + +++ V + R+G R G F
Sbjct: 572 VGRLMQGENEKLLHMEEYLGKRVIGQKEAIQAVSDAVRRSRAGISDPNRPTGSF------ 625
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 626 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 672
Query: 715 EQSCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 673 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 731
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 732 DFKNTILIMTS 742
>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
Length = 857
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + A +LA R + + P+H+ + +L G +R S + +L
Sbjct: 6 LTSKFQLALADAQSLALGRDNQFIEPVHLMSALLNQEGGTVRPLL---TSAGVNTASLRQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
A++RLP GG Q P SN L+ A +R +
Sbjct: 63 ELEQAISRLPQVEGA---GGDVQ-P--SNELIRVLNLCDKLAQKRNDTF----------- 105
Query: 130 IELEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E +++ L+D ++ +++ AG ++ +V + +EQ E + ++ +
Sbjct: 106 ISSELFVLAALEDRGNLGDILKAAGATTQKVSTAIEQMRGGEKVDDANAEDQRQALKKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 166 VDLTERAEQGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+ +I G+VPE L++ + L L + S R E E+R++ + N
Sbjct: 219 LAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L ++V Q + V ++N + + R+G R G F
Sbjct: 548 VSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+VI++
Sbjct: 713 VVIMTS 718
>gi|429462532|ref|YP_007183995.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811322|ref|YP_007447777.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338046|gb|AFZ82469.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776480|gb|AGF47479.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 860
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 27/264 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA+ + +A +LA H + P+H+ +L G ++ +S S L
Sbjct: 6 LTAKFQQIFVEAQSLAIVNEHQYIEPMHILRVLLNDVDGTSKSLIARSGS---SIDKLNK 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ +LN LP + + I L + R + R + ++ +I
Sbjct: 63 LLDDSLNSLPKVQNIDNI-------QIGRDLQSLMIRVEKESYR-----LKDSYISSEI- 109
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L+++ +D+ + R+++E+G + +++ + + + + S S+ KS +
Sbjct: 110 --FLLVASVDNGEIGRILKESGLNKNLLETAINELRGSDTINDSEDESNRKSLSKYTTDI 167
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ AS K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 TSRASNGK-------LDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQ 220
Query: 250 KIEKGDVPEALRDVKCLPLSISSF 273
+I G+VP+ L+ K L L I+S
Sbjct: 221 RIVNGEVPDNLKGKKVLSLDIASL 244
>gi|398990124|ref|ZP_10693328.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM24]
gi|399016805|ref|ZP_10719016.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM16]
gi|398104554|gb|EJL94686.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM16]
gi|398145195|gb|EJM33989.1| type VI secretion ATPase, ClpV1 family [Pseudomonas sp. GM24]
Length = 885
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 53/239 (22%)
Query: 122 QQPLLAVKIELEQ-------LIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL Q LI+++L +P MR AG + K N+++ +
Sbjct: 94 QDALLVANLELGQTQVEDAALILALLRNP-----MRYAGSRYQPLLAKLNIDRLKEFALS 148
Query: 173 SQSTPVSSNK-SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRN 229
Q P ++ K + + L+ T + T+ ++ LDP+ R+ + +++ L +RK N
Sbjct: 149 QQEQPAANGKPAAQGESLLQRFTHNLTQQARDG-KLDPVLCRDGAIRQMVDILARRRKNN 207
Query: 230 FVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR--- 284
+VVGE +V G+ +I G+VP+ L+ V+ L L + + V E E+R
Sbjct: 208 PIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKG 267
Query: 285 -VEEIK-----------------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
++E+K NL++ L RG + + WAE++
Sbjct: 268 VIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWAEYK 326
>gi|333892371|ref|YP_004466246.1| ClpB protein [Alteromonas sp. SN2]
gi|332992389|gb|AEF02444.1| ClpB protein [Alteromonas sp. SN2]
Length = 858
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 124/287 (43%), Gaps = 28/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ +L G +R Q++ + AL + A++R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMTALLNQQGGSVRPVLDQAN---VNVNALRSALSEAVDR 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
+ S +GG Q S L+ + A QR+ + +LA +I
Sbjct: 71 I---ASVDGIGGDVQLSKQSGILLNLCDKI-AQQRKDEYITSEIFVLA----------AI 116
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
D+ + ++++ + V++ ++ + + ++ E L++ A K
Sbjct: 117 QDNGRLGEILKQLNITKDNVENAIDSMRGGQTVNDPNAEDVRQALEKFTTDLTERAEQGK 176
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ ++ L + K N V++GE +V G+ +I G+VP
Sbjct: 177 -------LDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E L++ + L L + + R E E+R++ + N + GR I+
Sbjct: 230 EGLKNKRVLSLDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILF 276
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + L K+V Q + V ++N + + R+G R G F
Sbjct: 548 VAKMLEGERDKLLKMEDVLHKRVVGQGEAVEAVSNAIRRSRAGLADPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMERHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|383454395|ref|YP_005368384.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
gi|380732359|gb|AFE08361.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
Length = 874
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A +++ +LARR + P H+A +L G++ + K
Sbjct: 7 TVKAQEAIQEGQSLARRADNPHYEPEHLAAALLGQKDGIVDPLL---RKIGVDVKLFAGR 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL +LP + GG +S L+ F +A+ + A+K E
Sbjct: 64 LGEALQKLPR-----IQGGESAI--LSQRLMKTFDKAEDEAK------------ALKDEF 104
Query: 133 ---EQLIISILDDP-SVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
E L++++ D +V M+ +G + +V++ +++ + + S+ ++ E
Sbjct: 105 TSSEHLLLALTQDKGAVGEAMKSSGVTRERVQAGLKEVRGSSRVTSADAESTYQALEKYG 164
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L++ A + K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 165 RDLTEAARSGK-------LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEG 217
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVPE L++ + + L + + R E E+R++ + V G I+
Sbjct: 218 LARRIVDGDVPEGLKNKRLITLDLGAMVAGAKYRGEFEERLKAVLKEVADAAGEIILF 275
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + + L ++V Q+ + ++N V + RSG R G F
Sbjct: 550 VSKLMEGEMQKLVKMEDRLAERVIGQRSPIEAVSNAVRRARSGLQDPNRPIGSF------ 603
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K + AK LA +F V I +S + A S
Sbjct: 604 ------IFLGPTGVGKTETAKALAEFLFDDDTAMVRIDMSEYMEKHAVS-----RLVGAP 652
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A + + ++ GR+ S G V
Sbjct: 653 PGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNILLQILDEGRVTDSQGRTVDFR 712
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLD-LNICIDDDSTED 831
+ ++IL+ + S+A E+ +G ME + LN
Sbjct: 713 NTVLILTS---NIGSQAIQEGMAGTDTLNEKTRGEVMEALRAHFRPEFLN---------- 759
Query: 832 QSIDDIGLLESVDKRIIFKIMEL 854
+D+I + E + K+ I++I+++
Sbjct: 760 -RVDEIVIFEPLRKKDIYRIVDI 781
>gi|333377333|ref|ZP_08469068.1| chaperone ClpB [Dysgonomonas mossii DSM 22836]
gi|332884653|gb|EGK04910.1| chaperone ClpB [Dysgonomonas mossii DSM 22836]
Length = 863
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 131/296 (44%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ + + RG + P H+ ++ + ++ + ++P +
Sbjct: 6 FTIKSQEAVQKAIEITKERGQQAIEPAHILLGVIMSGENVVNFLFQKLGANPAYITS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N ++ P + GG SN+ A +A + ++ + +Q +
Sbjct: 63 VLNKEIDSFPKVSG----GGEAYLSRESNS---ALDKAMDYAKK--MGDQY-------VS 106
Query: 132 LEQLIISIL-DDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++ IL S S++M++AG S +++ + + + + + +S E +
Sbjct: 107 IEHLLLGILATKSSASQIMKDAGVSENELQQAISELRKGSNVNSQSAEDTYQSLEKYAIN 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ V++ L + K N +++GE + G+
Sbjct: 167 LTQRAKDGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIAEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L+ + L + + + E E+R++ + N V G I+
Sbjct: 220 HRIVRGDVPENLKSKQIYSLDMGALIAGAKYKGEFEERLKSVVNEVTKSEGEIILF 275
>gi|320533612|ref|ZP_08034249.1| putative ATP-dependent chaperone protein ClpB, partial [Actinomyces
sp. oral taxon 171 str. F0337]
gi|320134173|gb|EFW26484.1| putative ATP-dependent chaperone protein ClpB [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 836
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 43/303 (14%)
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L +LP S+ + M P S +L+AA + A + S E I E L+
Sbjct: 13 LTQLPTSSGSSM-----TQPQPSRSLLAALEAASTVAKELSDEY---------ISTEHLL 58
Query: 137 ISILDD------PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
I + P+V+R++ +AG + + + Q + + P + K+ E
Sbjct: 59 IGLAKGDTSGSTPTVARILADAGATPEALIEALPQVRGSSRVTSANPEGTYKTLEKYGTD 118
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 119 LTEAAREGR-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 171
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I GDVPE+LRD + + L +S R E E+R++ + ++ G ++ + +
Sbjct: 172 QRIVAGDVPESLRDKRLISLDLSGMVAGAKYRGEFEERLKAVLKEIKDSDGE-VITFIDE 230
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
L SE M+ G ++ + ++G T Y P
Sbjct: 231 LHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDP 279
Query: 367 SLE 369
+LE
Sbjct: 280 ALE 282
>gi|88857985|ref|ZP_01132627.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
gi|88819602|gb|EAR29415.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
Length = 860
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 42/302 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQS--HSHPLQCK-- 67
LT++ + + A +LA R H + P+H+ +L + +R ++ +S + K
Sbjct: 6 LTSKFQAAISDAQSLALGRDHQFIEPVHLMYALLQQTGSSVRALLAKAGVNSSEMNGKVS 65
Query: 68 -ALELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPL 125
A+E F V +GG Q P + N L K AQ + +
Sbjct: 66 QAMEKLFKV-----------EGIGGDVQLSPNMVNLLNLCDKYAQKRKDKF--------- 105
Query: 126 LAVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
I E I++ +D + + + G ++T+V++ ++ + ++ S +S
Sbjct: 106 ----ISSEIFILAACEDKGPLGEIFKTFGLNATKVETAIQAIRGGQKVEDASAEDSRQSL 161
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E + L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 162 EKYTVDLTERAELGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+ G+ +I G+VPE L+D + L L + + R E E+R++ + N + GR I
Sbjct: 215 IAEGLAQRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERLKAVLNELAKEEGRVI 274
Query: 301 VL 302
+
Sbjct: 275 LF 276
>gi|389735997|ref|ZP_10189600.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 115]
gi|388440067|gb|EIL96487.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 115]
Length = 735
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E +++ LDD + ++ AG + +++ +++ E ++ E
Sbjct: 104 IASELFVLAALDDKGELGAALKSAGANKANLEAAIDKLRGGEKVQSEGAEEQRQALEKYC 163
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L+ A ++K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 164 IDLTARAESSK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 216
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I KG+VPE LRD + L L + + R E E+R++ + N + GR I+
Sbjct: 217 LAQRIVKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLNDLSKQEGRVILF 274
>gi|374585575|ref|ZP_09658667.1| ATP-dependent chaperone ClpB [Leptonema illini DSM 21528]
gi|373874436|gb|EHQ06430.1| ATP-dependent chaperone ClpB [Leptonema illini DSM 21528]
Length = 855
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 131/305 (42%), Gaps = 48/305 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTG----LLRTACLQSHS--HPLQ 65
+T A+ V A LAR R HA++TP H+ +L G LL L S PLQ
Sbjct: 6 ITTMASQAVTSAQQLARDRHHAELTPEHLLYEILRQKNGIGPMLLDRLGLSGDSVIAPLQ 65
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQ 123
AL RLP G P S+ V+ +++A+ A QR +
Sbjct: 66 A---------ALERLPRVE-----GQEDVRP--SSTFVSLWQKAEKIAEQRSDQYLSN-- 107
Query: 124 PLLAVKIELEQLIISILDDPSV--SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSN 181
E ++I+ L+D + S+ + G + VK L+ P++S
Sbjct: 108 ---------EHVLIAYLEDRTQKHSQELLRTGLTPEAVKE------VLKDLRGDRPITS- 151
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
++ E + L + A S + LDP+ R+E++ +++ L + K N +++GE
Sbjct: 152 ENPEDTMEALEKYARNLNESARKGKLDPVIGRDEEIRRMMQVLTRRTKNNPLLIGEPGTG 211
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+V G+ KI G+VP+ L+D + L + S R E E R++ + + V G
Sbjct: 212 KTAIVEGMAGKIVAGEVPDGLKDKEIWALDLGSMVAGAKYRGEFEDRLKALLDEVTRSEG 271
Query: 298 RGIVL 302
R I+
Sbjct: 272 RVILF 276
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + E L + L K+V Q + ++ +L+ RSG R G F
Sbjct: 549 VSKMMQGEKEKLLHIEEELRKQVVGQDPAIESVSEAILRNRSGLSDPNRPVGVF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K + AK LAR +F + + I +S + A +
Sbjct: 603 ------LFLGPTGVGKTETAKALARFLFDDEHALLRIDMSEYMEKHAVA-----RLIGAP 651
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P++V L ++VE+A F + + GR+ S G V
Sbjct: 652 PGYVGYDEGGQLTEAVRRRPYQVILFDEVEKAHPEVFNIFLQLFDDGRLTDSKGRTVDFK 711
Query: 773 DAIVILSC 780
+ IVI++
Sbjct: 712 NTIVIMTS 719
>gi|320102257|ref|YP_004177848.1| ATP-dependent chaperone ClpB [Isosphaera pallida ATCC 43644]
gi|319749539|gb|ADV61299.1| ATP-dependent chaperone ClpB [Isosphaera pallida ATCC 43644]
Length = 883
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 29/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++ +LA+ R H ++ P+H+ +L + + Q P + + +
Sbjct: 8 FTHKSQEAVQKIQSLAQERHHQRIEPMHLLTALLEPEQTVTHSLLRQLGVDPARLR--QA 65
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
C L LP GG PT+ L+ F+ A+A R +++Q I
Sbjct: 66 C-EQGLEALPRVHG----GGD---PTLGPDLIKVFEAAKAEADR--LKDQY-------IS 108
Query: 132 LEQLIISILDDPSVSRVMREA-GFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++ P ++ + EA G + + + + + P ++ E
Sbjct: 109 VEHLLLALSKVPGKTKQLLEAVGVKEADLLQALIKVRGNQRVTDPNPEDKYQALERYGRD 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A K+ DP+ R+E++ V++ L + K N V++GE +V G+
Sbjct: 169 LVELARNGKI-------DPVIGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I GDVP++LRD K + L + +
Sbjct: 222 QRIVSGDVPDSLRDRKLIALDMGAL 246
>gi|21232500|ref|NP_638417.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767416|ref|YP_242178.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990519|ref|YP_001902529.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris
str. B100]
gi|54035864|sp|Q8P6A0.1|CLPB_XANCP RecName: Full=Chaperone protein ClpB
gi|21114288|gb|AAM42341.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572748|gb|AAY48158.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732279|emb|CAP50471.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
Length = 861
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ + A +LA R H + P+HV +L S G R QS + AL
Sbjct: 6 LTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQSG---VNVPALRE 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALV-AAFKRAQAHQRRGSIENQQQPLLAVKI 130
AL+ LP + G+ N L+ K AQ H I
Sbjct: 63 RLGEALDTLPKVSGQE---GNLSIGNDLNRLLNQTDKLAQQHG-------------DAFI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++ DD S + +R AG ++++ +++ E ++ E +
Sbjct: 107 ASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQALEKYTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+ A + K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE LR + L L + +
Sbjct: 220 AQRIINGEVPEGLRGKRVLSLDMGAL 245
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V+K E + L + + L ++V Q++ + +++ V + R+G R G F
Sbjct: 548 VNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ + L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|29350005|ref|NP_813508.1| endopeptidase Clp ATP-binding subunit B [Bacteroides
thetaiotaomicron VPI-5482]
gi|383121018|ref|ZP_09941735.1| chaperone ClpB [Bacteroides sp. 1_1_6]
gi|54035840|sp|Q89YY3.1|CLPB_BACTN RecName: Full=Chaperone protein ClpB
gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837649|gb|EES65740.1| chaperone ClpB [Bacteroides sp. 1_1_6]
Length = 862
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 133/296 (44%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P H+ + ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPAHILHGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ + LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIESLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S VS ++++AG + ++++ + + E + + + +S E +
Sbjct: 106 LEHILLALLTVKSTVSTILKDAGMTEKELRNAINELRKGEKVTSQSSEDNYQSLEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L L + L ++V Q + + +A+ V + R+G R G F
Sbjct: 546 VSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSF------ 599
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + I +S + + S
Sbjct: 600 ------IFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVS-----RLVGAP 648
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EA+ P+ V L +++E+A + ++ GR+ + G V+
Sbjct: 649 PGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFK 708
Query: 773 DAIVILSCESFSS 785
+ I+I++ SS
Sbjct: 709 NTIIIMTSNMGSS 721
>gi|336124918|ref|YP_004566966.1| ClpV protein [Vibrio anguillarum 775]
gi|335342641|gb|AEH33924.1| ClpV protein [Vibrio anguillarum 775]
Length = 863
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 33/296 (11%)
Query: 1 MRAGGCTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSH 60
MR G + + T++ + A +LA R H + P+H+ +L + +R
Sbjct: 1 MRKVGMRLDR-FTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLS 59
Query: 61 SHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSI 118
+Q ++ + L+RLP + +GG Q +S+A+ F A +R+ S
Sbjct: 60 VDVMQLRS---KLSEILDRLPKVSG---IGGDVQ---LSSAMGTMFNLCDKLAQKRQDSY 110
Query: 119 ENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPV 178
+ + LLA ++ D ++ ++++E G + +V +E+ + +
Sbjct: 111 ISSEVFLLA----------ALEDKGALGQLLKEIGLTEKKVSEAIEKVRGGQKVNDPNAE 160
Query: 179 SSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGEC 236
++ E + L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 ELRQALEKFTIDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEP 213
Query: 237 LASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I +VPE LR + L L + S R E E+R++ + N
Sbjct: 214 GVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 269
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + +AL ++V Q + V ++N + + R+G R G F
Sbjct: 553 VSKMLEAEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 607 ------LFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVG 660
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EA+ P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 661 YEEGGYL---TEAIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 717
Query: 775 IVILSCESFSSR 786
+VI++ SS+
Sbjct: 718 VVIMTSNLGSSQ 729
>gi|397737187|ref|ZP_10503860.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
gi|396926917|gb|EJI94153.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
Length = 877
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 29/294 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A +A R GH +V H+ ++ GL+ Q+ ++ AL
Sbjct: 6 LTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGAN---VDALRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+R P + G TI+ L A+ +R L +
Sbjct: 63 DLERELSRRPKVSGPGATPGQV---TITQRLAKLLDAAEREAKR---------LKDSYVS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ S S RV+ G + + + + + + +TP + ++ E
Sbjct: 111 VEHLVMALSEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQRVTSATPEGAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVSEGRAGK-------LDPVIGRDTEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR
Sbjct: 224 LAQRIVRGDVPEGLRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGR 277
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ V++ RSG R G F
Sbjct: 558 VARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRPIGSF------ 611
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F S +N V + +S + R+ SR
Sbjct: 612 ------IFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQE---------RHTVSRL 656
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G +
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 717 VDFRNTVIIMTS 728
>gi|384429028|ref|YP_005638388.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
gi|341938131|gb|AEL08270.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
Length = 859
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 30/266 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ + A +LA R H + P+HV +L S G R QS + AL
Sbjct: 4 LTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQSG---VNVPALRE 60
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALV-AAFKRAQAHQRRGSIENQQQPLLAVKI 130
AL+ LP + G+ N L+ K AQ H I
Sbjct: 61 RLGEALDTLPKVSGQE---GNLSIGNDLNRLLNQTDKLAQQHG-------------DAFI 104
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++ DD S + +R AG ++++ +++ E ++ E +
Sbjct: 105 ASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQALEKYTI 164
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+ A + K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 165 DLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 217
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I G+VPE LR + L L + +
Sbjct: 218 AQRIINGEVPEGLRGKRVLSLDMGAL 243
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V+K E + L + + L ++V Q++ + +++ V + R+G R G F
Sbjct: 546 VNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSF------ 599
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + I +S F + S
Sbjct: 600 ------LFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVG 653
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ + L+++VE+A + ++ GR+ G V +
Sbjct: 654 YEEGGYL---TEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNT 710
Query: 775 IVILSC 780
+++++
Sbjct: 711 VIVMTS 716
>gi|218708596|ref|YP_002416217.1| chaperone ClpB protein [Vibrio splendidus LGP32]
gi|218321615|emb|CAV17567.1| Chaperone clpB protein [Vibrio splendidus LGP32]
Length = 857
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 123/285 (43%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + A +LA R H + P+H+ ++L +R + +Q ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ L+R+P + +GG Q +SNA+ F A +R+ S + + LLA
Sbjct: 63 KLSEILDRVPKVSG---IGGDVQ---LSNAMGTLFNLCDKVAQKRQDSYISSEVFLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+I D + +++E G + ++ +EQ + ++ E +
Sbjct: 115 --------AIEDKGPLGNLLKELGLTEQKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R++++ I+ L + K N V++G+ +V G+
Sbjct: 167 DLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I +VPE LR + L L + S R E E+R++ + N
Sbjct: 220 AQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L + L K+V Q + V ++N + + R+G D + K
Sbjct: 548 VSKMLEAEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAG-------LSDPN--KPI 598
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V I +S F + + +
Sbjct: 599 GSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEE 658
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +VI
Sbjct: 659 GGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715
Query: 778 LSCESFSSR 786
++ S+R
Sbjct: 716 MTSNLGSTR 724
>gi|367477513|ref|ZP_09476863.1| Chaperone [Bradyrhizobium sp. ORS 285]
gi|365270192|emb|CCD89331.1| Chaperone [Bradyrhizobium sp. ORS 285]
Length = 879
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 30/291 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A ++ A +LA R GH Q +PLH+ +L GL ++ + +A+
Sbjct: 7 TERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGN---SRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
AL ++P + + G Q +S L AF A+ + + +
Sbjct: 64 TEDALGKMPKVSGS----GAGQI-YLSPELARAFDAAEKAAEKAGDSF---------VTV 109
Query: 133 EQLIISI-LDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E+L++ + LD S ++ + G ++ + + +E +T ++ + +
Sbjct: 110 ERLLLGLALDKNSETGGLLAKGGVTAQNLNAAIEALRKGRTADSATAENAYDALKKYARD 169
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+Q A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 170 LTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 222
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D + L L + + R E E+R++ + V + G
Sbjct: 223 LRIVNGDVPESLKDKRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEG 273
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + ++L K+V Q + V+ +A V + R+G R G F
Sbjct: 549 VDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|408827824|ref|ZP_11212714.1| ATP-dependent protease subunit [Streptomyces somaliensis DSM 40738]
Length = 866
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 148/367 (40%), Gaps = 48/367 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAAS-----TGLLRTACLQSHSHPLQC 66
LT ++ + A + A GH +TP H+ +L+ T LL A +++ ++
Sbjct: 5 LTNKSRDALNAATSRAVSDGHPDLTPAHLLLALLSGQDNENLTDLL--AAVEADQAAVRS 62
Query: 67 KALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
A L AL + ST P P + L+A AQA R E
Sbjct: 63 GAERLL--AALPSVTGSTVAP--------PQPNRDLLAVVADAQARARELGDEY------ 106
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L+I I AG T+ ++ ++ ++ S+ T + + E
Sbjct: 107 ---LSTEHLLIGIAAKGG------PAGELLTRQGADAKKLLAAFTGSRGTRRITTQDPEG 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + + + LDP+ R++++ V++ L + K N V++GE VV
Sbjct: 158 QYKALEKFGTDLTAAAREGRLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I KGDVPE+LRD + + L + + R E E+R++ + + ++ GR IV
Sbjct: 218 EGLAQRIVKGDVPESLRDKRLVSLDLGAMVAGAKYRGEFEERLKTVLSEIKESEGR-IVT 276
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
+ +L + + M+ G ++ + ++G T Y
Sbjct: 277 FIDELHTVVGAGAGGDSA-----------MDAGNMLKPMLARGELRMVGATTLDEYRERI 325
Query: 363 SGHPSLE 369
P+LE
Sbjct: 326 EKDPALE 332
>gi|374316474|ref|YP_005062902.1| ATP-dependent chaperone ClpB [Sphaerochaeta pleomorpha str. Grapes]
gi|359352118|gb|AEV29892.1| ATP-dependent chaperone ClpB [Sphaerochaeta pleomorpha str. Grapes]
Length = 859
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 40/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTAC--LQSHSHPLQCKAL 69
+T + ++ A LA G+A++T H+ ++L+ GLL L S + K
Sbjct: 6 MTIKLRQAIQDADALANEHGNAEITTEHLLLSLLSQKEGLLSPLFDKLGIPSKQVHSKIQ 65
Query: 70 ELCFNVALNRLP---ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLL 126
EL RLP +T+ + G + N L AA K A +
Sbjct: 66 ELV-----ERLPKAYGATAQRSISGQ-----LGNELYAADKIAADFKDE----------- 104
Query: 127 AVKIELEQLIISILDDPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++++IL+D S + + + G + V ++ + + P S +S E
Sbjct: 105 --YLSAEHVLLAILEDGSTAGKALLNLGITKDGVMQALQTIRGNQTINTEDPESRYQSLE 162
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
++ A K LDP+ R+E++ +++ L K K N V++GE +
Sbjct: 163 KYCKDITALARQGK-------LDPVIGRDEEIRRIMQVLSRKTKNNPVLIGEPGVGKTAI 215
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIV 301
V G+ +I GDVPE+L+D + L L + S R E E+R++ + V S G+ I+
Sbjct: 216 VEGLALRIGSGDVPESLKDKRILSLDVGSLVAGAKFRGEFEERLKAVIKEVSSRAGQVIL 275
Query: 302 L 302
Sbjct: 276 F 276
>gi|302556316|ref|ZP_07308658.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302473934|gb|EFL37027.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 879
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 153/367 (41%), Gaps = 46/367 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A T A R G +V H+ +L GL+ + P + +A
Sbjct: 6 LTQKSQEALQEAQTAAVRMGQTEVDGEHLLLALLDQEDGLIPRLLQGAGREPEELRA--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L+R P T G F T +S L AA E + + L
Sbjct: 63 AVREELSRRPKVTGPGAAPGQV-FVTQRLSRLLDAA-------------EREAKRLKDEY 108
Query: 130 IELEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ +E L++++ ++ S + R+++E G + S + Q + + + P + ++ E
Sbjct: 109 VSVEHLLLALAEEGSATAAGRLLKEHGITRDSFLSALTQIRGNQRVTSANPEVAYEALEK 168
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A K LDP+ R+ ++ V + L K K N V++G+ +V
Sbjct: 169 YGRDLVAEARDGK-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR I+L
Sbjct: 222 EGLAQRIVRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGR-ILL 280
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
+ +L A ++E M+ G+++ + ++G T Y +
Sbjct: 281 FVDELHTV-VGAGAAEGA-----------MDAGQMLKPMLARGELHMIGATTLDEYRKHI 328
Query: 363 SGHPSLE 369
+LE
Sbjct: 329 EKDAALE 335
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ +++ RSG R G F
Sbjct: 556 VARLQEGEREKLLRLDEILRERVIGQDEAVKLVADAIIRARSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LAR +F S +N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLARALFDSEDNMVRLDMSEYQE---------RHTVSRL 654
Query: 715 EQS----CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ Y E + EAV P+ V L +++E+A + ++ GRI + G
Sbjct: 655 MGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|111023664|ref|YP_706636.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
gi|110823194|gb|ABG98478.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
Length = 789
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 29/294 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A +A R GH +V H+ ++ GL+ Q+ ++ AL
Sbjct: 6 LTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGAN---VDALRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+R P + G TI+ L A+ +R L +
Sbjct: 63 DLERELSRRPKVSGPGATPGQV---TITQRLAKLLDAAEREAKR---------LKDSYVS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ S S RV+ G + + + + + + +TP + ++ E
Sbjct: 111 VEHLVMALSEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQRVTSATPEGAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVSEGRAGK-------LDPVIGRDTEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR
Sbjct: 224 LAQRIVRGDVPEGLRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGR 277
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ V++ RSG R G F
Sbjct: 558 VARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRPIGSF------ 611
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F S +N V + +S + R+ SR
Sbjct: 612 ------IFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQE---------RHTVSRL 656
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G +
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 717 VDFRNTVIIMTS 728
>gi|188581554|ref|YP_001924999.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
gi|179345052|gb|ACB80464.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
Length = 874
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 39/300 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T A V+ A LA R G+ Q+ P H+ +L GL+ A QS Q +
Sbjct: 7 TERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVAHAQVEQ 66
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRG-SIENQQQPLL 126
P + G+ P + LV F A QA ++ G S ++ LL
Sbjct: 67 W-------------LAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLL 113
Query: 127 AVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
A +E D R++ AG ++ + + + + + N S E+
Sbjct: 114 AFAVE---------KDSEGGRILTAAGVTAASLNAAIN-------ALRKGRTADNASAEN 157
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L + A + LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 158 AYDALKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIV 217
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+L++ L L + + R E E+R++ + + V + G+ I+
Sbjct: 218 EGLALRIVNGDVPESLKEKNLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILF 277
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 24/212 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L ++ AL K+V Q++ V ++ V + R+G R G F
Sbjct: 552 VDKMLEGEREKLLAMEEALGKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 606 ------MFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 655 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEE 804
+ ++I++ S + P Q +D +E
Sbjct: 715 NTLLIMT--SNLGAEYLVNQPAGQDTDAVRDE 744
>gi|328953205|ref|YP_004370539.1| ATP-dependent chaperone ClpB [Desulfobacca acetoxidans DSM 11109]
gi|328453529|gb|AEB09358.1| ATP-dependent chaperone ClpB [Desulfobacca acetoxidans DSM 11109]
Length = 858
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 32/267 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A LA+ AQV H+ T+LA GL+R + P K ++
Sbjct: 6 FTIKAQQAVQGAHELAQTMSQAQVEAGHLLRTLLAQEDGLVRPLIKKMEVEP--QKVIQG 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
++ T P + G Q P ++ L A+K QA Q R + + LA
Sbjct: 64 VEDII-------TRYPRVSGAAQLYLAPELNQVLDDAYK--QATQMRDDYVSTEHLFLA- 113
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
++ + V R++ G V + + + +P + E
Sbjct: 114 --------LTRAKNSDVGRLLASLGIHPEAVMQALAALRGSQRVTDQSPEEKFQPLEKYG 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L++ A A K LDP+ R+ ++ +++ L + K N V++GE +V G
Sbjct: 166 RDLTELARAGK-------LDPVIGRDMEIRRIMQVLSRRTKNNPVLIGEAGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF 273
+ +I GDVPE L+D + + L + +
Sbjct: 219 LAQRIVNGDVPETLKDKQIVTLDMGAL 245
>gi|167644956|ref|YP_001682619.1| ATP-dependent chaperone ClpB [Caulobacter sp. K31]
gi|167347386|gb|ABZ70121.1| ATP-dependent chaperone ClpB [Caulobacter sp. K31]
Length = 864
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 30/287 (10%)
Query: 16 AASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNV 75
A V+ A +LA RGH Q+ P H+ +L GL R + P
Sbjct: 10 AKQAVQSAQSLALARGHQQLGPEHLLKVLLEEKDGLSRALIQSAGGRP------------ 57
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQL 135
+ A+T T + + P + A + + + + E + + E+L
Sbjct: 58 --DAADAATDTLL----TKTPRVDGAGGQLYMKPDTARVFEAAEAGAKKAGDAFVTTERL 111
Query: 136 IISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQT 194
+I+I + ++V+++AG ++ +++ ++ + + L+Q
Sbjct: 112 LIAIAKEGGDAAKVLKDAGATAQGLETAAAAVRKGRTADSASAEEGYDALKRYARDLTQA 171
Query: 195 ASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIE 252
A K+ DP+ R+E++ I+ L + K N V++GE +V G+ +I
Sbjct: 172 ARDGKI-------DPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIV 224
Query: 253 KGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
GDVPE+L+D K L L + S R E E+R++ + V + G
Sbjct: 225 NGDVPESLKDKKLLSLDMGSLIAGAKYRGEFEERLKAVLGEVTAAEG 271
>gi|449127715|ref|ZP_21763986.1| chaperone ClpB [Treponema denticola SP33]
gi|448943549|gb|EMB24437.1| chaperone ClpB [Treponema denticola SP33]
Length = 859
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 30/295 (10%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T +A+ V++A +LA+R H+QV H+ +L G++ + P ++L
Sbjct: 7 TVKASEAVQEASSLAQRDDHSQVESEHLLYVLLEQEDGIVPPLVEKIGVSP---ESLLDE 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIEL 132
+ L+R P T G IS L F A+ + + E +
Sbjct: 64 LDKMLDRKPRVT------GQSAQTYISPLLAKVFANAEGYADKLKDEY---------VST 108
Query: 133 EQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E L++++ + ++R G + + S +++ + P S+ +S E L
Sbjct: 109 EHLLLALAESKDETGELLRSRGINLKNLLSALKEIRGNNRVTSENPESTFRSLEKFCRDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+Q A K+ DP+ R+E++ V++ L + K N V++GE +V G+
Sbjct: 169 TQLAKNEKI-------DPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLAR 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVP++L+ + L L + + R E E+R++ + + V+ GR I+
Sbjct: 222 RIVSGDVPDSLKGKRLLSLDLGALVAGAKFRGEFEERLKAVISEVQKSEGRVILF 276
>gi|383318057|ref|YP_005378899.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
gi|379045161|gb|AFC87217.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
Length = 860
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT+ + A +LA R + P+HV +L G TA L + + + AL
Sbjct: 6 LTSRFQQALADAQSLAVGRDQNMLEPIHVMTALLDQQGG--STAPLLTQAQ-VNVPALRQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKI 130
AL +LP + G+ + NAL + Q+RG I
Sbjct: 63 RLAAALEQLPKVSGQE---GNIH---VGNALTRLLNLTDKLAQQRGD----------QFI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E +++ +D+ + +++ AG + +++ +E+ E ++ E +
Sbjct: 107 ASELFVLAAVDEQGELGAILKAAGAARAPLEAAIEKLRGGEKVQSENAEEQRQALEKYCV 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+ A + K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTARAESGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I KG+VPE LRD + L L + + R E E+R++ + N + GR I+
Sbjct: 220 AQRIVKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLNDLAKQEGRVILF 276
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 18/191 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L ++V Q + V +++ + + R+G R G F
Sbjct: 548 VAKMLEGEREKLLHMEQVLHERVVGQDEAVRAVSDAIRRARAGLSDPNRPYGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALADFLFDTQDAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSCESFSS 785
+++++ SS
Sbjct: 713 VIVMTSNLGSS 723
>gi|340787492|ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331]
gi|340552759|gb|AEK62134.1| ClpB protein [Collimonas fungivorans Ter331]
Length = 867
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 32/297 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A + A + + P+H +L G T+ LQ + ALE
Sbjct: 6 LTTKLQEAIADAQSQAVGNDNQYIDPVHALIALLNQDDGSA-TSLLQRAG--VNVAALET 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLLAVKI 130
AL RLP + GG Q I L+A A Q+RG I
Sbjct: 63 GLKAALERLPKVSGA---GGEVQ---IGRELLALLNLADKEAQKRGD----------QFI 106
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L++++LDD S R+ RE G + +++ + + ++ + L
Sbjct: 107 ASEMLLLALLDDKSDAGRLARENGLTRKALEAAITAVRGGANVASQDGEGQREALKKYTL 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTERARLGK-------LDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VP++L+ + L L +++ R E E+R++ + + G+ IV
Sbjct: 220 AQRIVNGEVPDSLKSKRVLSLDMAALLAGAKFRGEFEERLKAVLKEIAQDEGQTIVF 276
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 85/222 (38%), Gaps = 37/222 (16%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L + + L K+V Q + + +++ + + R+G R G F
Sbjct: 557 VSKMLQGERDKLVKMEDELHKRVVGQNEAIVAVSDAIRRSRAGLSDPDRPYGSF------ 610
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + + I +S F + +
Sbjct: 611 ------MFLGPTGVGKTELCKALAGFLFDSTDALIRIDMSEFMEKHSVARLIGAPPGYVG 664
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ E V P+ V L++++E+A + ++ GR+ G V +
Sbjct: 665 YEEGGYL---TELVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNT 721
Query: 775 IVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSV 816
+++++ S R + AMEG+ P+V
Sbjct: 722 VIVMTSNLGSHRIQ-------------------AMEGSDPAV 744
>gi|298292690|ref|YP_003694629.1| ATP-dependent chaperone ClpB [Starkeya novella DSM 506]
gi|296929201|gb|ADH90010.1| ATP-dependent chaperone ClpB [Starkeya novella DSM 506]
Length = 872
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 129/300 (43%), Gaps = 29/300 (9%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T A V+ A +LA R G+ Q TP H+ +L GL +S P A
Sbjct: 7 TERARGFVQSAQSLALREGNQQFTPEHLLKVLLDDPEGLCAGLIQRSGGDPRMVLA---D 63
Query: 73 FNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRA-QAHQRRGSIENQQQPLLAVKIE 131
AL +LP + G Q ++ A F A QA ++ G V +E
Sbjct: 64 TEAALKKLPKVQGS----GAGQV-YLAPATARVFDAAEQAAKKAGDG--------YVTVE 110
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
L +++ D +++ +A + ++ + +E +T ++ + + L
Sbjct: 111 RLLLALALEKDSEAGKILAKADATPQKINAAIEALRKGRTADSATAENAYDALKKYARDL 170
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 171 TSAAREGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 223
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I GDVPE+L+D L L + S R E E+R++ + + V + G GI+L + ++
Sbjct: 224 RIVDGDVPESLKDKSLLALDMGSLIAGAKYRGEFEERLKSVLSEVEAAEG-GIILFIDEM 282
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + + L K+V QK+ V ++ V + R+G R G F
Sbjct: 554 VDKMLEGEKEKLLRMEDVLSKRVIGQKEAVEAVSTAVRRARAGLQDPNRPIGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F V I +S + A +
Sbjct: 608 ------MFLGPTGVGKTELTKALASFLFDDDTALVRIDMSEYMEKHAVA-----RLIGAP 656
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 657 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 716
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 717 NTLIIMTS 724
>gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter
crescentus CB15]
gi|221233859|ref|YP_002516295.1| ClpB protein [Caulobacter crescentus NA1000]
gi|54035891|sp|Q9A9T4.1|CLPB_CAUCR RecName: Full=Chaperone protein ClpB
gi|13422139|gb|AAK22863.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter
crescentus CB15]
gi|220963031|gb|ACL94387.1| ClpB protein [Caulobacter crescentus NA1000]
Length = 859
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 36/290 (12%)
Query: 16 AASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNV 75
A V+ A +LA RGH Q P H+ +L GL R + P
Sbjct: 10 AKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRP------------ 57
Query: 76 ALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQL 135
++L T + + P + A + + + E + + E+L
Sbjct: 58 --DQLDGGVETLL----AKTPRVDGAGGQLYMKPDTARVFAEAEKSAKAAGDAFVTTERL 111
Query: 136 IISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQST---PVSSNKSKESNVLVL 191
+I+I + +++ +EAG S A SLE + + + + + E L
Sbjct: 112 LIAIAKEGGEAAKLFKEAGVS----------AQSLETAANAMRKGRTADSANAEEGYEAL 161
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+ A + LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 162 KRYARDLTAAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+I GDVPE+L+D K L L + S R E E+R++ + V + G
Sbjct: 222 RIVNGDVPESLKDKKLLSLDMGSLIAGAKYRGEFEERLKAVLGEVTAAEG 271
>gi|365127480|ref|ZP_09340050.1| ATP-dependent chaperone ClpB [Subdoligranulum sp. 4_3_54A2FAA]
gi|363624353|gb|EHL75430.1| ATP-dependent chaperone ClpB [Subdoligranulum sp. 4_3_54A2FAA]
Length = 864
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 37/308 (12%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
Q +T ++ ++ A +LA + + P H+ +L+ GL+ + + P A
Sbjct: 4 QKMTQKSLEALQAAQSLAVEYENQALCPEHLFCALLSQQDGLIPQLFQKMGAEPGNLAA- 62
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQF-PTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
F + LP T T P + AL AA K A A +
Sbjct: 63 --AFAKKVGELPHVTGTGRDPEKVYITPELDRALTAAEKSAAAMKDE------------- 107
Query: 129 KIELEQLIISILDDP--SVSRVMREAGFSSTQVKSNVEQAVSLEICSQ---STPVSSNKS 183
+ +E L++ ++D P +V V+R+ T+ LE+ +Q + V+S+ +
Sbjct: 108 YVSVEHLVLGMMDAPNAAVKEVLRQFSLDKTRF---------LEVLAQVRGNQRVTSD-N 157
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
ES VL++ + LDP+ R+ ++ VI L K K N V++GE
Sbjct: 158 PESTYDVLAKYGQDLVELARQQKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKT 217
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRG 299
+ G+ +I +GDVPE L+D K L + + R E E+R++ + V+ G+
Sbjct: 218 AIAEGLALRIVRGDVPENLKDRKVFSLDMGALVAGAKYRGEFEERLKSVLQEVKKSEGQ- 276
Query: 300 IVLNLGDL 307
I+L + +L
Sbjct: 277 IILFIDEL 284
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L L L K+V Q + V + +L+ R+G R G F
Sbjct: 555 VAKLMEGEREKLLHLDGILHKRVIGQDEAVQRVTEAILRSRAGIADENRPIGSF------ 608
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F N V I +S + + S
Sbjct: 609 ------LFLGPTGVGKTELAKALAEALFDDEKNIVRIDMSEYMEKYSVS-----RLIGAP 657
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A + ++ GRI S G V
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFK 717
Query: 773 DAIVILS 779
+ I+IL+
Sbjct: 718 NTIIILT 724
>gi|187478914|ref|YP_786938.1| ATP-dependent protease ATPase subunit [Bordetella avium 197N]
gi|115423500|emb|CAJ50034.1| ATP-dependent protease, ATPase subunit (chaperone) [Bordetella
avium 197N]
Length = 867
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 43/302 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+HV + +LA + S + L +A
Sbjct: 6 LTTKFQQALADAQSLAARNDNPYIEPVHVLSALLADA---------DSGAASLLARA--- 53
Query: 72 CFNVALNRL-----PASTSTPMLGGHCQFPTISNALVAAFKRAQAHQ-RRGSIENQQQPL 125
VA+NRL A + P + G +S L F R RRG
Sbjct: 54 --GVAVNRLQPALDAAIRALPQVAGSDNV-QVSRDLQGVFTRTDKEAARRGD-------- 102
Query: 126 LAVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
I E + ++ DD R++REAG +++ ++ E S + S+ ++
Sbjct: 103 --TFIASELFLWALADDKGEAGRILREAGLQKKALETAIDAVRGGEKVSAAEGESNREAL 160
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 SKYTLDLTERAREGK-------LDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTA 213
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGI 300
+V G+ +I +VPE LR + L L ++ R E E+R++ + + G+ I
Sbjct: 214 IVEGLAQRIVNDEVPETLRGKRVLSLDLAGLLAGAKFRGEFEERLKAVLKELSQDDGQNI 273
Query: 301 VL 302
V
Sbjct: 274 VF 275
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 12/194 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E + L + +AL K+V Q + V +A+ + + R+G D S K
Sbjct: 556 VSKMMEGERDKLLHMEDALHKRVVGQDEAVSLVADAIRRSRAG-------LADPS--KPY 606
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ + LA +F S + + I +S F + S +
Sbjct: 607 GSFLFLGPTGVGKTELTRALADFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 666
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ G + G V + +++
Sbjct: 667 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGGLTDGQGRTVDFRNTVIV 723
Query: 778 LSCESFSSRSRACS 791
++ S + ++ S
Sbjct: 724 MTSNLGSQQIQSMS 737
>gi|154252203|ref|YP_001413027.1| ATPase [Parvibaculum lavamentivorans DS-1]
gi|154156153|gb|ABS63370.1| ATPase AAA-2 domain protein [Parvibaculum lavamentivorans DS-1]
Length = 880
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 31/289 (10%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A LA R GH + TP H+ +L GL + P Q AL+ AL++
Sbjct: 14 IQSAQGLAVRSGHQRFTPEHLLKVLLDDEEGLAAGLIRAAGGRPDQ--ALQ-GVETALSK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
+P + G Q ++ + F +A++ ++ + E+L++++
Sbjct: 71 MPKVEGS----GAGQL-YLAPEIAKVFDQAESLAKKAGDSY---------VTAERLLLAM 116
Query: 140 LDDPSVS--RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
L P ++++ AG ++ + + +E + + + S E L + A
Sbjct: 117 LLTPGTESEKILKTAGITAQSLNAAIE-------SVRKGRTADSASAEDAYDALKKYARD 169
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
LDP+ R+E++ I+ L + K N V++GE + G+ +I GD
Sbjct: 170 LTADARSGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAITEGLALRIVNGD 229
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
VPE+L++ + L + + R E E+R++ + V S G GI+L
Sbjct: 230 VPESLKNKSLMALDLGALIAGAKYRGEFEERLKAVLAEVSSADG-GIIL 277
>gi|116254016|ref|YP_769854.1| chaperone ClpB (heat-shock protein) [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258664|emb|CAK09768.1| putative chaperone ClpB (heat-shock protein) [Rhizobium
leguminosarum bv. viciae 3841]
Length = 866
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 27/287 (9%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + GG+ ++ L A+ ++ + V+ L+ L SI
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAAKKAG-----DSFVTVERLLQAL--SI 117
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
S ++ AG ++ + Q ++ +I T SSN E L + A
Sbjct: 118 ESSASTFSTLKNAGVTA----QGLNQVIN-DIRKGRTADSSNA--EQGFDSLKKFARDLT 170
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
LDP+ R++++ I+ L + K N V++GE +V G+ +I GDVP
Sbjct: 171 AEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVP 230
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
E+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 231 ESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|343428092|emb|CBQ71616.1| probable heat shock protein HSP104 (endopeptidase Clp ATP-binding
chain HSP104) [Sporisorium reilianum SRZ2]
Length = 916
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 45/296 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLA--------------ASTGLLRTACL 57
T A S V A+ LA+ H QV+P H+A +L +S L ++ C
Sbjct: 5 FTDRAQSSVSAALQLAKDHSHPQVSPAHIALALLTDDTSNSQGVQSTNESSQSLFKSICA 64
Query: 58 QSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGS 117
++ + K E L ++P+ T P ++S+ + K A
Sbjct: 65 KAG---VDAKIFEDKLRTTLRKIPSQTPPP------DDISLSSQALKVLKEA-------- 107
Query: 118 IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQ-VKSNVEQAVSLEICSQST 176
ENQ+ I + +++ ++ D ++ ++++EAG ++ Q +K+ + QA +
Sbjct: 108 -ENQKSTQRDSYIAQDHILLGLIQDNTIKQLLKEAGLANEQLIKTAITQA-------RGG 159
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+KS E+ L++ + SLDP+ R++++ + L + K N V++G
Sbjct: 160 RHIDSKSAEAGYDALAKYCTDLTQLAAEGSLDPVIGRDQEIRRAVRVLSRRTKNNAVLIG 219
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFR--HMNRVEVEQRVEEI 288
+V G+ ++ DVP L K L L + R E E+RV+ +
Sbjct: 220 SPGVGKTAIVEGLAQRVVDRDVPPNLLG-KILSLDVGGLMAGAKYRGEYEERVKSV 274
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E L L L K+V Q + V +A + RSG D + +
Sbjct: 568 VSRMLESEKNKLLRLERTLAKEVIGQDEAVKSVAQAIRLSRSG-------LADAN--RPI 618
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K +++ LA+ +F S + V I S FS + S +
Sbjct: 619 ASFLFAGSSGSGKTLLSRTLAKCMFDSADAMVRIDCSEFSEKHSISRLIGAPPGYVGHEE 678
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EAV P + L++++E+A + F ++ GR+ S G +VS + I+I
Sbjct: 679 GGVL---TEAVRRKPFSIVLLDEIEKASREFVQLFLGVLDEGRLQDSQGRQVSFRNTIII 735
Query: 778 LS 779
++
Sbjct: 736 MT 737
>gi|253681744|ref|ZP_04862541.1| ATP-dependent chaperone protein ClpB [Clostridium botulinum D str.
1873]
gi|253561456|gb|EES90908.1| ATP-dependent chaperone protein ClpB [Clostridium botulinum D str.
1873]
Length = 876
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E + L L + L+K+V Q++ ++N V++ R+G KD E +
Sbjct: 565 VTRLVEGERQKLLRLEDELKKRVIGQEEATVAVSNAVIRARAG-------LKD--ERRPI 615
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LAR +F S +N + I +S + A S
Sbjct: 616 GSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVS-----RLIGPPPGY 670
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV NP+ V L +++E+A+ F + ++ GR+ + G V + I
Sbjct: 671 IGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQILDDGRLTDNKGKTVDFKNTI 730
Query: 776 VILSCESFSS 785
+I++ SS
Sbjct: 731 IIMTSNLGSS 740
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ I L + K N V++GE +V G+ ++I +GDVPE L++
Sbjct: 192 LDPVIGRDEEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKEKI 251
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V+S G+ I+
Sbjct: 252 IFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKIILF 291
>gi|256395560|ref|YP_003117124.1| ATP-dependent chaperone ClpB [Catenulispora acidiphila DSM 44928]
gi|256361786|gb|ACU75283.1| ATP-dependent chaperone ClpB [Catenulispora acidiphila DSM 44928]
Length = 886
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 32/304 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + +A T A R GH +V H+ +L GL+ Q + +AL
Sbjct: 6 LTQKSQEALAEAQTTATRLGHTEVDGEHLLVALLDQQDGLVPRLLAQLGA---DVEALHA 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
+ L + P T G +S L AA E + + L +
Sbjct: 63 DLSADLAKRPRVTGPGATPGQVMITQRLSRLLDAA-------------EREAKRLKDEYV 109
Query: 131 ELEQLIISILDD---PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
+E L + ++++ S R +RE G + + + + +TP + ++ E
Sbjct: 110 SVEHLTLPLIEEGTATSAGRRLRERGVTREAFLKALTSVRGNQRVTSATPEGTYEALEKY 169
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L A A K LDP+ R+ ++ V++ L K K N V++G+ +V
Sbjct: 170 GRDLVAEARADK-------LDPVIGRDAEIRRVVQILSRKTKNNPVLIGDPGVGKTAIVE 222
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLN 303
G+ +I +GDVPE LRD L + + R E E+R++ + V++ GR I+L
Sbjct: 223 GLAQRILRGDVPEGLRDKTVFSLDMGALVAGAKYRGEFEERLKAVLAEVKAAEGR-ILLF 281
Query: 304 LGDL 307
+ +L
Sbjct: 282 IDEL 285
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ V++ RSG R G F
Sbjct: 556 VARLQEGEREKLLRLDEILRERVIGQDEAVRLVADAVIRSRSGIRDPRRPIGSF------ 609
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F S N V + +S + R+ SR
Sbjct: 610 ------IFLGPTGVGKTELAKTLAAALFDSEENMVRLDMSEYQE---------RHTVSRL 654
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G
Sbjct: 655 IGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRT 714
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 715 VDFRNTVIIMTS 726
>gi|225352556|ref|ZP_03743579.1| hypothetical protein BIFPSEUDO_04180 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156750|gb|EEG70144.1| hypothetical protein BIFPSEUDO_04180 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 904
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 8 IQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCK 67
++Q T A + A+ A G+AQV LH+ + +L G++R + +
Sbjct: 5 MEQKFTTMAQEAISDAVQNASAAGNAQVETLHLLDALLRQENGVIRGLIEAAGGNAQNIS 64
Query: 68 ALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
A + A + LP+ + G P +S L A AQA + + Q +
Sbjct: 65 A---AVHQAQDALPSVS-----GSTTAQPQVSRQLSAVL--AQAGK-------EMQQMGD 107
Query: 128 VKIELEQLIISILD-DPSVS-RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E L+I+I P+ S ++M + G ++ ++ V + S K+ E
Sbjct: 108 EYVSTEHLLIAIAAAKPNQSAQIMEQYGVTADALRKAVPTIRGGAKVTSPDAEGSYKALE 167
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
L+ A K LDP+ R++++ VI+ L + K N V++GE V
Sbjct: 168 KYSTDLTAAAKEGK-------LDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAV 220
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQR----VEEIKN 290
V G+ +I GDVP L++ K + L + S + R E E+R ++EIKN
Sbjct: 221 VEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLQEIKN 273
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 28/191 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + + +E L ++ + L K+V QK+ + +++ V + R+G R G F
Sbjct: 581 VGRLMQGENEKLLTMEDYLGKRVIGQKEAIQAVSDAVRRSRAGISDPNRPTGSF------ 634
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F V I +S + + S
Sbjct: 635 ------LFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIG------- 681
Query: 715 EQSCSYI-----ERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEV 769
+ YI + EAV P+ V L ++VE+A+ + ++ GR+ G V
Sbjct: 682 -AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTV 740
Query: 770 SLGDAIVILSC 780
+ I+I++
Sbjct: 741 DFKNTILIMTS 751
>gi|300853817|ref|YP_003778801.1| chaperone [Clostridium ljungdahlii DSM 13528]
gi|300433932|gb|ADK13699.1| chaperone [Clostridium ljungdahlii DSM 13528]
Length = 865
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L L + L K+V QK+ V ++N VL+ R+G R G F
Sbjct: 554 VSKLVEGERQKLVKLEDELAKRVIGQKEAVTAVSNAVLRARAGMKDPKRPIGSF------ 607
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LAR +F S N + I +S + + S
Sbjct: 608 ------IFLGPTGVGKTELAKTLARTLFDSEENIIRIDMSEYMEKYSVS-----RLIGAP 656
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A F + ++ GR+ + G V
Sbjct: 657 PGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNQGKVVDFK 716
Query: 773 DAIVILSCESFSS 785
++I+I++ SS
Sbjct: 717 NSIIIMTSNIGSS 729
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ V+ L + K N V++G+ ++ G+ ++I +GD+PE L++
Sbjct: 181 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGDPGVGKTAIIEGLAERIVRGDIPEGLKNKI 240
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
L + + R E E+R++ + V+ G+ IVL + ++ A +E
Sbjct: 241 IFSLDMGALIAGAKFRGEFEERLKAVLKEVQKSEGK-IVLFIDEIHTI-VGAGKTEGS-- 296
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI--P 380
M+ G L+ + +G TF Y + +LE + P+ I P
Sbjct: 297 ---------MDAGNLIKPMLARGELHCIGATTFDEYRKYIEKDKALERRF--QPVVIDEP 345
Query: 381 AGSLSLSLI 389
S+S++
Sbjct: 346 TVEDSISIL 354
>gi|212639968|ref|YP_002316488.1| Class III stress response-related ATPase [Anoxybacillus
flavithermus WK1]
gi|212561448|gb|ACJ34503.1| Class III stress response-related ATPase [Anoxybacillus
flavithermus WK1]
Length = 860
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 30/303 (9%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKAL 69
Q +T + +A +LA + H +V HV +L GL R + +L
Sbjct: 4 QQMTEKVQEAFMRAQSLAIEKQHQEVDVEHVCVALLEQEDGLARRIY---EKMSVSVSSL 60
Query: 70 ELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
+N LN+ P S+ G ++N L RA+ ++ E
Sbjct: 61 LDEWNKQLNKKPQVISSSEAGK----IYVTNRLQQWLVRAEQEAKQMKDEY--------- 107
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+ +E L+++++DD +++ G +++ + +EI VS N L
Sbjct: 108 VSVEHLLLTLVDDKEAKQILSRYGVDRKKLQQTI-----MEIRGNQRVVSPNPEATYEAL 162
Query: 190 VLSQTASATKVSKPRVS-LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
Q V++ + +DP+ R+ ++ VI L K K N V++GE +V G
Sbjct: 163 ---QKYGRDLVAEVKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I + DVPE L+D L +S+ R E E+R++ + + ++ GR I+L +
Sbjct: 220 LAQRIVRKDVPEGLKDKTIFALDMSALIAGAKFRGEFEERLKAVLHEIKKSEGR-IILFI 278
Query: 305 GDL 307
+L
Sbjct: 279 DEL 281
>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 861
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 37/269 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA + +T +H+ M+ + + S + L
Sbjct: 6 LTVKLQKNLLDAQSLAVLNDNQYITSIHILKAMIDDEDTFISNILVSS---GVVISKLNT 62
Query: 72 CFNVALNRLPA--STSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQPLLAV 128
+VAL +LP + + LG Q F RA+ +RG
Sbjct: 63 LLDVALKKLPKVHNINDVQLGKELQ---------GLFIRAEKEASKRGD----------D 103
Query: 129 KIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
I E L+I + DD VS +++E+G + +K ++ + + SN + ESN
Sbjct: 104 YISSEILLIVLSDDKGDVSVLLKESGLKTNLLKESINNI-------RGSDKISNMNDESN 156
Query: 188 VLVLSQ-TASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
LS+ T T +++ + LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 157 RNALSKYTTDVTSLAR-QGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIV 215
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ +I G+VP+ LRD + L L ++S
Sbjct: 216 EGLAQRIINGEVPDNLRDKRVLSLDLASL 244
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L + + L K+ Q + V +++ +L+ R+G D S +
Sbjct: 551 VSKMMQGEREKLLHMSDFLNSKIIGQSEAVNAVSDAILRARAG-------LSDQS--RPS 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LA +F S ++ + I +S F + + +
Sbjct: 602 GSFLFLGPTGVGKTELAKALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ S G V + I+I
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDSHGRTVDFRNTIII 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|345883482|ref|ZP_08834925.1| chaperone ClpB [Prevotella sp. C561]
gi|345043773|gb|EGW47826.1| chaperone ClpB [Prevotella sp. C561]
Length = 862
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ +A+R G + P+H+ ++ ++ + +A+E
Sbjct: 6 FTIKAQEAVQSAINIAQRNGQQTIEPVHILAGVMEKGKDVINYVF---QKLGVNAQAVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ LP + GG + +N Q QR I Q + +
Sbjct: 63 AIQNEMSHLPKVS-----GGEPYLSSETN---------QVMQRTMDI---SQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++++L + + SR++++AG + E ++ Q V S +S + N
Sbjct: 106 IEPMLLALLAVNSTASRILKDAGCTEK------EMTAAINDLRQGQKVQS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LQKYARNLIEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAM 243
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +A+ V + R+G K K F G
Sbjct: 555 DKLLHLEDELHKRVIGQDEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS TR Y E
Sbjct: 606 GTGKTELAKALADYLFNDESMMTRIDMSEYQEKFSVTRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTS 716
>gi|400292082|ref|ZP_10794054.1| ATP-dependent chaperone protein ClpB [Actinomyces naeslundii str.
Howell 279]
gi|399902811|gb|EJN85594.1| ATP-dependent chaperone protein ClpB [Actinomyces naeslundii str.
Howell 279]
Length = 892
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 51/371 (13%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQCKA 68
T ++ + AM A G+ Q+ P H+ +L + GLL C + + +A
Sbjct: 6 TTKSQEAISGAMQAAAAAGNPQIEPAHLLVELLSQPDGVAAGLLAAVCPDAAAR----QA 61
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ L +LPAS+ + M P S AL+AA + A + S E
Sbjct: 62 VGASARRILTQLPASSGSSM-----TQPQPSRALLAALEAASTAAKELSDEY-------- 108
Query: 129 KIELEQLIISILDD------PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
I E L+I + P+V+R++ +AG + + + Q + + P + K
Sbjct: 109 -ISTEHLLIGLAKGDASGSTPTVARILADAGATPEALVEALPQVRGSSRVTSANPEGTYK 167
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
+ E L++ A + LDP+ R+ ++ V++ L + K N V++GE
Sbjct: 168 TLEKYGTDLTEAAREGR-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGK 220
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
VV G+ +I GDVPE+LR + + L +S R E E+R++ + ++ G
Sbjct: 221 TAVVEGLAQRIVAGDVPESLRGKRLIALDLSGMVAGAKYRGEFEERLKAVLKEIKDSDGE 280
Query: 299 GIVLNLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSY 358
++ + +L SE M+ G ++ + ++G T Y
Sbjct: 281 -VITFIDELHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEY 328
Query: 359 MRCKSGHPSLE 369
P+LE
Sbjct: 329 RENIEKDPALE 339
>gi|380694422|ref|ZP_09859281.1| endopeptidase Clp ATP-binding subunit B [Bacteroides faecis MAJ27]
Length = 862
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 133/296 (44%), Gaps = 32/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V++A+ L + RG + P H+ + ++ + + + + L
Sbjct: 6 FTIKSQEAVQEAVNLVQSRGQQAIEPAHILHGVMKVGENVTNFIF---QKLGMNGQQVAL 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ ++ LP + GG P +S ++A + + E +
Sbjct: 63 VVDKQIDSLPKVS-----GGE---PYLSRESNEVLQKATQYSKEMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L S VS ++++AG + +++ + + E + + + ++ E +
Sbjct: 106 LEHILLALLTVKSTVSTILKDAGMTEKELRDAINELRKGEKVTSQSSEDNYQALEKYAIN 165
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + K LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 166 LNEAARSGK-------LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIVL 302
+I +GDVPE L++ + L + + + E E+R++ + N V+ G I+
Sbjct: 219 HRILRGDVPENLKNKQVYSLDMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILF 274
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L L + L ++V Q + + +A+ V + R+G R G F
Sbjct: 546 VSKMLQSEKDKLLHLEDELHQRVIGQNEAIEAVADAVRRSRAGLQDPKRPIGSF------ 599
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + I +S + + S
Sbjct: 600 ------IFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVS-----RLVGAP 648
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EA+ P+ V L +++E+A + ++ GR+ + G V+
Sbjct: 649 PGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFK 708
Query: 773 DAIVILSCESFSS 785
+ I+I++ SS
Sbjct: 709 NTIIIMTSNMGSS 721
>gi|241206499|ref|YP_002977595.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860389|gb|ACS58056.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 866
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG+ ++ L A+ ++ S ++ L A+ IE
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTF 124
Query: 138 SILDDPSVS-----RVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
S L + V+ +V+ + T SN EQ SL+ ++ + + K
Sbjct: 125 STLKNAGVTAQGLNQVINDIRKGRTADSSNAEQGFDSLKKFARDLTAEAREGK------- 177
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 178 ---------------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 223 RIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|346726873|ref|YP_004853542.1| ClpB protein [Xanthomonas axonopodis pv. citrumelo F1]
gi|346651620|gb|AEO44244.1| ClpB protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 920
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 54/286 (18%)
Query: 76 ALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG-------SIENQQQPLLA 127
AL+ LP ST+ L + + + A+ +A R G S+ + LLA
Sbjct: 74 ALDALPRGSTAVTDLSANVEEAVERGWVYASLSFGEAQVRTGYLVVGILSVRGLRNALLA 133
Query: 128 VKIELEQLIISILDDPSVSRVMR---EAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ E ++L ++L + +R++ E G + S + A E P + K +
Sbjct: 134 ISKEFDKLKPAVLSE-DFARIVAGSPEDGLLPSDGFSLGQTAAPGEASGAIAPAALGKQE 192
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
TA A + LDPI R++++ V++ LM +R+ N ++VGE
Sbjct: 193 ALKKFTTDLTAQAREGK-----LDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTA 247
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR----VEEIK------- 289
VV G +I +GDVP AL+DV+ L + + + E EQR ++E++
Sbjct: 248 VVEGFAQRIARGDVPPALKDVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPII 307
Query: 290 ----------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G +AE++
Sbjct: 308 LFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYK 353
>gi|407070078|ref|ZP_11100916.1| chaperone ClpB protein [Vibrio cyclitrophicus ZF14]
Length = 857
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + A +LA R H + P+H+ ++L +R + +Q ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L+R+P + +GG Q + L + A +R+ S + + LLA
Sbjct: 63 KLSEMLDRVPKVSG---IGGDVQLSSAMGTLFNLCDKV-AQKRQDSYISSEVFLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+I D + +++E G + ++ +EQ + ++ E + L
Sbjct: 115 ------AIEDKGPLGNLLKELGLTEKKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTIDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 169 TERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I +VPE LR + L L + S R E E+R++ + N
Sbjct: 222 RIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERLKSVLN 264
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L + L K+V Q + V ++N + + R+G D + K
Sbjct: 548 VSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAG-------LSDPN--KPI 598
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V I +S F + + +
Sbjct: 599 GSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEE 658
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +VI
Sbjct: 659 GGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715
Query: 778 LSCESFSSR 786
++ SSR
Sbjct: 716 MTSNLGSSR 724
>gi|383812607|ref|ZP_09968042.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 306
str. F0472]
gi|383354808|gb|EID32357.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 306
str. F0472]
Length = 862
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ +A+R G + P+H+ ++ ++ + +A+E
Sbjct: 6 FTIKAQEAVQSAINIAQRNGQQTIEPVHILAGVMEKGKDVINYVF---QKLGVNAQAVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ LP + GG + +N Q QR I Q + +
Sbjct: 63 AIQNEMSHLPKVS-----GGEPYLSSETN---------QVMQRTMDI---SQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++++L + + SR++++AG + E ++ Q V S +S + N
Sbjct: 106 IEPMLLALLAVNSTASRILKDAGCTEK------EMTAAINDLRQGQKVQS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LQKYARNLIEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAM 243
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +A+ V + R+G K K F G
Sbjct: 555 DKLLHLEDELHKRVIGQDEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS TR Y E
Sbjct: 606 GTGKTELAKALADYLFNDESMMTRIDMSEYQEKFSVTRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTS 716
>gi|282876956|ref|ZP_06285805.1| ATP-dependent chaperone protein ClpB [Prevotella buccalis ATCC
35310]
gi|281300910|gb|EFA93230.1| ATP-dependent chaperone protein ClpB [Prevotella buccalis ATCC
35310]
Length = 863
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ LA+ G + P+H+ +L + + +P Q +AL
Sbjct: 7 FTIKAQETVQEAVNLAQNAGQQTIEPIHLLLALLNKGKDVTTFIFQKLGINPSQIEALAQ 66
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LP + GG +N ++ K QR G +
Sbjct: 67 S---EIEHLPKVS-----GGQPYLSNDTNMVLQ--KTMDLSQRFGD----------QFVS 106
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
LE +++++L + S SR++++AG + + +++ Q + V S +S + N
Sbjct: 107 LEPMLLALLTVNSSASRILKDAGCTEKDMTKAIDE------LRQGSKVQS-QSGDENYQA 159
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 160 LDKYAKNLVQEARSGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE L++ + L + +
Sbjct: 220 GRIVRGDVPENLKNKQLYSLDMGAL 244
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 26/212 (12%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +++ V + R+G H + F G
Sbjct: 556 DKLLHLESELHKRVIGQDEAITAVSDAVRRSRAGL---------HDPKRPIASFIFLGTT 606
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS +R Y E
Sbjct: 607 GVGKTELAKALAEYLFNDESMMTRIDMSEYQEKFSVSRLIGAPPG---------YVGYDE 657
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 658 GGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTS 717
Query: 781 ESFSS--RSRACSPPTKQKSDGCEEEKGAAME 810
S + + + D E K ME
Sbjct: 718 NLGSQYIQEQMAGIDAHNREDKLRETKHTVME 749
>gi|237745846|ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
gi|229377197|gb|EEO27288.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes HOxBLS]
Length = 864
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 32/300 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q LT + + A +LA + + P+H+ +L + G ++ LQ +
Sbjct: 3 QDKLTTKLQEAIADAHSLAVGNDNQYIDPVHLLTALLQQNDGSTKS-LLQRAG--VNVNK 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L A++RLP T T GG Q + N L A + AQ N Q
Sbjct: 60 LAGALKTAVDRLPKVTGT---GGDVQIGRELMNVLNLADREAQKR-------NDQF---- 105
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I E +++++LDD S R+ REAG S + +++ ++ + + ++ +
Sbjct: 106 --IASEMILLALLDDKSEAGRLAREAGLSRSALEAAIKAVRGDANVNSADAEGQREALKK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 164 YTMDLTERARQGK-------LDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +VPE+L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 217 EGLAQRIVNNEVPESLKGKRVLALDMAALLAGAKFRGEFEERLKAVLNELAKDEGQDIVF 276
>gi|282860238|ref|ZP_06269309.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
gi|424899253|ref|ZP_18322799.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
gi|282586971|gb|EFB92205.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
gi|388593467|gb|EIM33705.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
Length = 863
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A +++ A+ +A+++G + +H+ L + + + +E
Sbjct: 6 FTIKAQEIIQSAVMIAQQKGQQTIEAIHLLAGALDKGKEVTNYVF---QKLGINTQNVEN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG----SIENQQQPLLA 127
L LP + GG F + +N ++ K + Q+ G SIE LL
Sbjct: 63 AVQSELAHLPK-----VQGGEPYFSSETNQVLQ--KTVEISQQLGDEFVSIEPLLLALLT 115
Query: 128 VKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESN 187
VK + SR+M++AG + ++K+ + + Q V S +S + N
Sbjct: 116 VK-------------STASRIMKDAGCTEKEMKAAINE------LRQGQKVQS-QSGDEN 155
Query: 188 VLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVR 245
L + A LDP+ R+E++ V++ L + K N +++GE +V
Sbjct: 156 YQALEKYARNLVEDARNGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVE 215
Query: 246 GVIDKIEKGDVPEALRDVKCLPLSISSF 273
G+ ++I +GDVPE L+D K L + +
Sbjct: 216 GLAERIVRGDVPENLKDKKLYSLDMGAL 243
>gi|315281718|ref|ZP_07870283.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria marthii FSL S4-120]
gi|313614643|gb|EFR88222.1| negative regulator of genetic competence ClpC/MecB [Listeria
marthii FSL S4-120]
Length = 585
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E + +L + L KV Q+D V +A + + R G R G F
Sbjct: 269 VGRLQEDEQSKMKNLESNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGSF------ 322
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ + LAR +FG+ + + +S F + S
Sbjct: 323 ------LFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVG 376
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 377 HEEAG---QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 433
Query: 775 IVILSCESFSSRSRAC 790
++I++ + ++ + A
Sbjct: 434 VIIMTSNAGATETEAS 449
>gi|260592293|ref|ZP_05857751.1| ATP-dependent chaperone protein ClpB [Prevotella veroralis F0319]
gi|260535743|gb|EEX18360.1| ATP-dependent chaperone protein ClpB [Prevotella veroralis F0319]
Length = 862
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+ A+ +A+R G + P+H+ ++ ++ + +A+E
Sbjct: 6 FTIKAQEAVQSAINIAQRNGQQTIEPVHILAGVMEKGKDVINYVF---QKLGVNAQAVES 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ LP + GG + +N Q QR I Q + +
Sbjct: 63 AIQNEMSHLPKVS-----GGEPYLSSEAN---------QVMQRTMDI---SQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++++L + + SR++++AG + E ++ Q V S +S + N
Sbjct: 106 IEPMLLALLAVNSTASRILKDAGCTEK------EMTAAINDLRQGQKVQS-QSGDENYQS 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L + A LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LQKYARNLIEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L+D + L + +
Sbjct: 219 ERIVRGDVPENLKDKQLYSLDMGAM 243
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
+ L L + L K+V Q + + +A+ V + R+G K K F G
Sbjct: 555 DKLLHLEDELHKRVIGQDEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F + I +S FS TR Y E
Sbjct: 606 GTGKTELAKALADYLFNDESMMTRIDMSEYQEKFSVTRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTS 716
>gi|254564665|ref|XP_002489443.1| Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p
(Hsp70) [Komagataella pastoris GS115]
gi|238029239|emb|CAY67162.1| Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p
(Hsp70) [Komagataella pastoris GS115]
gi|328349871|emb|CCA36271.1| Chaperone protein clpB [Komagataella pastoris CBS 7435]
Length = 903
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 121/288 (42%), Gaps = 34/288 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A +++ A LA+ H QV P+H+ M + + E
Sbjct: 6 FTDRALAIITNATKLAKDNSHPQVQPIHLLAAMAPTDEDTTPYLKVLVEKGRFDWQTFER 65
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N AL R+P+ T P F ++ A Q G + QQ+ I
Sbjct: 66 NINRALIRVPSQTPAPT---DVSFSGVA---------AHVIQEAGKMRQQQKD---SYIG 110
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLE----ICSQSTPVSSNKS-KES 186
+ L++++L+D S++++++++ S +K+ Q ++L I S+ SSN +
Sbjct: 111 QDHLLLALLEDKSITQILKDSSISPDALKT---QIINLRGNQRIDSRQADSSSNHEFLDK 167
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K+ DP+ R E++ I L + K N ++G+ +V
Sbjct: 168 YAIDLTEQAREGKI-------DPVIGREEEIRRTIRVLARRTKSNPCLIGDPGVGKTSIV 220
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKN 290
V +I DVP L++ K L + + + + E E+R++ + N
Sbjct: 221 EAVAQRIIDNDVPNILQNSKLYALDLGALKAGAKYQGEFEERIKGVLN 268
>gi|56965211|ref|YP_176943.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
clausii KSM-K16]
gi|56911455|dbj|BAD65982.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
clausii KSM-K16]
Length = 700
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K ++ + + L N L KV Q++ V +A V + R+G + G
Sbjct: 393 VRKLQKAEQQKMKDLANRLAAKVIGQEEAVDKVAKAVKRSRAGL--KAGN--------RP 442
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTE-DSRNKRSRDEQ 716
F G K ++ K+LA+ V+G + + + +S F + S S E+
Sbjct: 443 ISFLFVGPTGVGKTELTKQLAQEVYGKKESMIRLDMSEFMEKHSVSKLIGSPPGYVGHEE 502
Query: 717 SCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIV 776
ER V NP+ + L++++E+A Q F + +E GR+ S G VS D ++
Sbjct: 503 GGQLTER----VRRNPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRVVSFKDTMI 558
Query: 777 ILS 779
I++
Sbjct: 559 IMT 561
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+++V VI+ L + K N V++GE + G+ +I GDVP L++ +
Sbjct: 92 IDPVIGRDQEVERVIQVLSRRTKNNPVLIGEAGVGKTAIAEGLARRIASGDVPAKLQNKQ 151
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQVRG 322
+ SS R + E+R++++ + V S +++ + +L +S E
Sbjct: 152 IYAIDFSSLVAGTSYRGQFEERMQKLIDEVSSR--DDVIVFVDELHMIVGAGASGEGN-- 207
Query: 323 YYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLETLWSLHPLTI--P 380
M+ G L+ L+G T Y + + P+LE + P+T+ P
Sbjct: 208 ---------MDAGNLLKPALARGSMQLIGATTLAEYRKIEK-DPALERRF--QPVTVKEP 255
Query: 381 AGSLSLSLI 389
S +L+++
Sbjct: 256 TTSQALAIL 264
>gi|365539747|ref|ZP_09364922.1| ClpV protein [Vibrio ordalii ATCC 33509]
Length = 858
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 32/277 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A +LA R H + P+H+ +L + +R +Q ++ + L+R
Sbjct: 14 ISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLSVDVMQLRS---KLSEILDR 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
LP + +GG Q +S+A+ F A +R+ S + + LLA
Sbjct: 71 LPKVSG---IGGDVQ---LSSAMGTMFNLCDKLAQKRQDSYISSEVFLLA---------- 114
Query: 138 SILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASA 197
++ D ++ ++++E G + +V + +E+ + + ++ E + L++ A
Sbjct: 115 ALEDKDALGQLLKEIGLTEPKVSAAIEKVRGGQKVNDPNAEELRQALEKFTIDLTERAEQ 174
Query: 198 TKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGD 255
K LDP+ R++++ I+ L + K N V++GE +V G+ +I +
Sbjct: 175 GK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNE 227
Query: 256 VPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
VPE LR + L L + S R E E+R++ + N
Sbjct: 228 VPEGLRGRRVLSLDMGSLVAGAKYRGEFEERLKSVLN 264
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + +AL ++V Q + V ++N + + R+G R G F
Sbjct: 548 VSKMLEEEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EA+ P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSCESFSSR 786
+VI++ SS+
Sbjct: 713 VVIMTSNLGSSQ 724
>gi|398809981|ref|ZP_10568817.1| type VI secretion ATPase, ClpV1 family [Variovorax sp. CF313]
gi|398084384|gb|EJL75071.1| type VI secretion ATPase, ClpV1 family [Variovorax sp. CF313]
Length = 925
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 37/144 (25%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+E++ +++ LM +R+ N ++ GE VV G ++ +GDVP L+DVK
Sbjct: 209 MDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFAQRLARGDVPPQLKDVK 268
Query: 265 CLPLSISSFRHMNRV--EVEQRVEEI---------------------------------K 289
L L I + + E EQR+ ++
Sbjct: 269 LLTLDIGLLQAGASMKGEFEQRLRQVIDEVQSSPTPIILFIDEIHTLVGAGGAAGTGDAA 328
Query: 290 NLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G WAE++
Sbjct: 329 NLLKPALARGNLRTIGATTWAEYK 352
>gi|118444397|ref|YP_877171.1| negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
gi|118134853|gb|ABK61897.1| Negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
Length = 813
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 107/268 (39%), Gaps = 39/268 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V K E ++ L L L K+V Q + V IA V + R G + R G F
Sbjct: 492 VEKLTEKEADRLLKLEETLHKRVIGQNEAVKSIARAVRRARVGLKDSKRPIGSF------ 545
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K +++K LA +FG NN + I +S + A S
Sbjct: 546 ------IFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGSPPGYVG 599
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + E V +P+ V L +++E+A + +E GR+ S G V
Sbjct: 600 HDEGG-----QLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVDFK 654
Query: 773 DAIVILSCESFSSR-----SRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLD-LNICIDD 826
+ I+IL+ +SR + S + D E+ K ME S + LN
Sbjct: 655 NTIIILTSNVGASRINKQNTLGFSRSEDEAEDEYEKMKDNVMEELKNSFRPEFLN----- 709
Query: 827 DSTEDQSIDDIGLLESVDKRIIFKIMEL 854
IDDI + S+D+ + +I++L
Sbjct: 710 ------RIDDIIVFHSLDEENLKEIVKL 731
>gi|405382551|ref|ZP_11036332.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF142]
gi|397320957|gb|EJJ25384.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF142]
Length = 867
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 33/290 (11%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
V+ A T A +GH Q T HV +L G+ + ++ KA L + AL +
Sbjct: 14 VQSAQTYALAQGHQQFTAEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + GG+ ++ L F A+ ++ + V+ L+ L I
Sbjct: 71 LPKVS-----GGNGNI-YLAQPLAKVFSTAEEAAKKAG-----DSFVTVERLLQALAIET 119
Query: 140 LDDPSVSRVMREAGFSS---TQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTAS 196
S + ++ AG ++ QV + + + + + S S K + L+ A
Sbjct: 120 --SASTYQSLKNAGVTAQALNQVINEIRKGRTADTASAEQGFDSLKKYARD---LTSDAR 174
Query: 197 ATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKG 254
K LDP+ R++++ I+ L + K N V++GE +V G+ +I G
Sbjct: 175 EGK-------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNG 227
Query: 255 DVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
DVPE+L+D K + L + + R E E+R++ + N V+S G I+
Sbjct: 228 DVPESLKDKKLMALDMGALIAGAKFRGEFEERLKAVLNEVQSENGEIILF 277
>gi|261880646|ref|ZP_06007073.1| chaperone ClpB [Prevotella bergensis DSM 17361]
gi|270332599|gb|EFA43385.1| chaperone ClpB [Prevotella bergensis DSM 17361]
Length = 862
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V++A+ +AR+ + P+H+ ++ + T Q + + +E
Sbjct: 6 FTIKAQEAVQEAVNIARQANQQAIEPIHLLQGIMQKGKDVT-TFVFQKLA--INAMQIEN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L LP GG P SN +RA + ++ E +
Sbjct: 63 LVQQELQHLPRVE-----GGQ---PYFSNETNQVLQRAMDYAQKMGDEF---------VS 105
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E ++++IL S R++++AG + +++ +++ Q V S +S + N
Sbjct: 106 VEPMLLAILQSNSPAGRILKDAGCTEQEMQKAIQE------LRQGQQVHS-QSGDENFQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A + LDP+ R+E++ V++ L + K N +++GE + G+
Sbjct: 159 LSKYAKNLVDEARKGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIAEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE L++ + L + +
Sbjct: 219 QRIVRGDVPENLKNKQLYSLDMGAL 243
>gi|164688260|ref|ZP_02212288.1| hypothetical protein CLOBAR_01905 [Clostridium bartlettii DSM
16795]
gi|164602673|gb|EDQ96138.1| ATP-dependent chaperone protein ClpB [Clostridium bartlettii DSM
16795]
Length = 864
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 34/260 (13%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L L + L ++V Q + V ++N V++ R+G KD + K
Sbjct: 555 VTKLVEGEREKLLKLEDELHERVIGQNEAVTAVSNAVIRARAG-------LKDEN--KPI 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK LAR +F S N + I +S + + S
Sbjct: 606 GSFIFLGPTGVGKTELAKTLARSLFDSEENIIRIDMSEYMEKHSVS-----RLVGPPPGY 660
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ V L +++E+A F + ++ GR+ + G+ V + I
Sbjct: 661 VGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGNTVDFKNTI 720
Query: 776 VILSCESFSSRSRACSPPTKQKSDGCEEEKGAAMEGTSPSVSLD-LNICIDDDSTEDQSI 834
+I++ SS + + EE KG M + LN +
Sbjct: 721 IIMTSNIGSSYL------LQDQGKITEETKGLVMGEMKRRFKPEFLN-----------RV 763
Query: 835 DDIGLLESVDKRIIFKIMEL 854
DDI + +S+DK I KI+++
Sbjct: 764 DDIIMFKSLDKEEIKKIIDI 783
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R+E++ +I L + K N V++GE +V G+ ++I +GDVPE L+D
Sbjct: 182 LDPVIGRDEEIRRIIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKDKI 241
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + + R E E+R++ + V++ G+ I+
Sbjct: 242 IFSLDMGALIAGAKYRGEFEERLKAVLKEVQNAEGKIILF 281
>gi|395784957|ref|ZP_10464691.1| chaperone ClpB [Bartonella tamiae Th239]
gi|423718135|ref|ZP_17692325.1| chaperone ClpB [Bartonella tamiae Th307]
gi|395425469|gb|EJF91630.1| chaperone ClpB [Bartonella tamiae Th239]
gi|395426568|gb|EJF92695.1| chaperone ClpB [Bartonella tamiae Th307]
Length = 867
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 34 QVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHC 93
Q P H+ +L + GL + L+ L KA++ N AL+ LP + GG+
Sbjct: 28 QFLPEHLLKVLLDDNDGLC-ASLLEKAGGDL--KAVKTSLNEALSALPKVS-----GGNG 79
Query: 94 QFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK-----IELEQLIISILDDPSV--S 146
Q +S L F +A+ LA K + +E+L+ ++L + S S
Sbjct: 80 QL-YMSQPLAKVFTKAEE--------------LAEKSGDSFVTVERLLQALLMEKSAKTS 124
Query: 147 RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV-----LSQTASATKVS 201
++ E G +ST + + ++ T S+N + + L L+Q A K
Sbjct: 125 DILSENGVASTDLNKVIN-----DMRKGRTADSANAEAQYDALKKYARDLTQDAREGK-- 177
Query: 202 KPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEA 259
LDP+ R+E++ I+ L + K N V++GE ++ G+ +I GDVPE
Sbjct: 178 -----LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVNGDVPET 232
Query: 260 LRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
LRD L L + + R E E+R++ I V+S G I+
Sbjct: 233 LRDKALLALDMGALIAGAKYRGEFEERLKAILTEVQSANGEIILF 277
>gi|336398905|ref|ZP_08579705.1| ATP-dependent chaperone ClpB [Prevotella multisaccharivorax DSM
17128]
gi|336068641|gb|EGN57275.1| ATP-dependent chaperone ClpB [Prevotella multisaccharivorax DSM
17128]
Length = 862
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 120/265 (45%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A +++A+ A+ + P+H+ +L + + + +Q ++L
Sbjct: 6 FTIKAQEAIQEAVNTAQMAHQQAIEPVHLLQGILQKGRDVTNFVFQKLGVNAMQIESL-- 63
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L LP GG F SN ++ ++A A + E +
Sbjct: 64 -VQQELKHLPRVE-----GGQPYFSNDSNKVL---EKAVADSQEMDDEF---------VS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E +++++L D +VSR++++AG + ++ +++ Q V S +S + N
Sbjct: 106 IEPMLLALLQVDSTVSRILKDAGCTEQEMVKAIQE------LRQGQSVQS-QSADDNYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A + LDP+ R+E++ V++ L + K N +++GE +V G+
Sbjct: 159 LSKYARNLVDEARKGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
++I +GDVPE L++ + L + +
Sbjct: 219 ERIVRGDVPENLKNKQLFSLDMGAL 243
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
E L L + L K+V Q + + +A+ V + R+G K F G
Sbjct: 555 EKLLHLEDELHKRVVGQDEAINAVADAVRRSRAGLQDPKRPI---------ASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F N I +S FS TR Y E
Sbjct: 606 GTGKTELAKALADYLFNDENMMTRIDMSEYQEKFSVTRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTS 716
>gi|237748625|ref|ZP_04579105.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes OXCC13]
gi|229379987|gb|EEO30078.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
formigenes OXCC13]
Length = 864
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 134/300 (44%), Gaps = 32/300 (10%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q LT + + A ++A + V P+H+ + +L G ++ LQ +
Sbjct: 3 QDKLTTKLQEAIADAHSMAVGNDNQYVDPVHLVSALLRQDDGSAKS-LLQRAG--VNVNK 59
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLA 127
L N A++RLP + T GG Q + N L A K AQ N Q
Sbjct: 60 LASSLNSAVDRLPKVSGT---GGDVQIGRELMNVLNLADKEAQKR-------NDQF---- 105
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I E +++++LDD S R+ RE+G S + +++ ++ + + ++ +
Sbjct: 106 --IASEMILLALLDDKSEAGRLARESGLSRSALEAAIKAVRGDTNVNSADAEGQREALKK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L L++ A K LDP+ R++++ I+ L + K N V++GE +V
Sbjct: 164 YTLDLTERARQGK-------LDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +VPE+L+ + L L +++ R E E+R++ + N + G+ IV
Sbjct: 217 EGLAQRIVNDEVPESLKGKRVLALDMAALLAGAKFRGEFEERLKAVLNELAKDEGQDIVF 276
>gi|400287671|ref|ZP_10789703.1| chaperonin clpA/B [Psychrobacter sp. PAMC 21119]
Length = 865
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 29/264 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + S +++A +LA R H + P+H+ +L + L + C Q+ + AL+
Sbjct: 6 FTQKLQSAIQEAQSLALGRDHTGIDPVHLLAILLQDESNL--SICQQAGA---SIPALKN 60
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
AL+ A+ S P G P L A ++AQ + +A
Sbjct: 61 GIAKALDN-QATISEPT-GDVNLNPNSVKILNLADRQAQ---------KEGDDFIAT--- 106
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
E +++++ + ++ AG ++ ++K+ +EQ E + + + L
Sbjct: 107 -EWVMLALAEQGETKKIFESAGVTAAKLKAVIEQLRGDETVNNQNAEDQRDALNKYTINL 165
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A K LDP+ R+E++ I+ L + K N V++GE +V G+
Sbjct: 166 TEQAELGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQ 218
Query: 250 KIEKGDVPEALRDVKCLPLSISSF 273
KI GDVPE LR + L L + +
Sbjct: 219 KIINGDVPEGLRRKEVLSLDLGAL 242
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V+K + E + ++ L ++V Q + V +AN V + R+G R G F
Sbjct: 552 VNKMMQGEREKMLAMEEKLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S ++ V I +S + + S
Sbjct: 606 ------LFLGPTGVGKTELTKSLANFLFDSEDSIVRIDMSEYMEKHSVS-----RLVGAP 654
Query: 715 EQSCSYIERFA--EAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E A EAV P+ V L ++VE+A + ++ GR+ S G V
Sbjct: 655 PGYVGYEEGGALTEAVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFK 714
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 715 NTVIIMTS 722
>gi|385808594|ref|YP_005844990.1| ATP-dependent Clp protease ATP-binding subunit [Ignavibacterium
album JCM 16511]
gi|383800642|gb|AFH47722.1| ATP-dependent Clp protease ATP-binding subunit [Ignavibacterium
album JCM 16511]
Length = 871
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT +A +V+ A+ +A+ + V H+ ++ S + T ++ + A+++
Sbjct: 8 LTVKAQEIVQSAIEIAQNYNNQIVETEHILAAIVQESGNIAETIIKKTGGN---FNAIKI 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N L +LP + T + G+ Q +S AL F A ++ + L +
Sbjct: 65 KVNELLEKLPKVSGTGL--GNQQ---MSGALAKLFDNAA---------DEAKNLKDEYVS 110
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E L++++ +DP +++R+ G + +V + ++ + + P + ++ E
Sbjct: 111 TEHLLLALANDPGKAGQLLRDNGITYNEVLAALKTVRGTQRVTSQNPEDTYQALEKYGRD 170
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A K LDP+ R+E++ V++ L + K N V++GE + G+
Sbjct: 171 LNDLARQGK-------LDPVIGRDEEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIAEGIA 223
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I GDVPE L+ + + L + +
Sbjct: 224 HRIISGDVPENLKTKRIVALDMGAL 248
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 30/181 (16%)
Query: 609 LTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGV 665
L L L K+V Q++ V +AN + + RSG R G F F G
Sbjct: 565 LLRLEEELHKRVVGQEEAVVAVANAIRRARSGLQDVNRPIGSF------------IFLGT 612
Query: 666 DADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYI 721
K ++A+ LA +F + + I +S FS +R Y
Sbjct: 613 TGVGKTELARALAEFLFDDEHAMIRIDMSEYMEKFSVSRLIGAPPG---------YVGYE 663
Query: 722 E--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILS 779
E + EAV P+ V L++++E+A + ++ GR+ + G V+ + I+I++
Sbjct: 664 EGGQLTEAVRRRPYSVVLLDEIEKAHSDVFNILLQVLDDGRLTDNQGRTVNFKNTIIIMT 723
Query: 780 C 780
Sbjct: 724 S 724
>gi|148978564|ref|ZP_01815016.1| ClpB protein [Vibrionales bacterium SWAT-3]
gi|145962353|gb|EDK27634.1| ClpB protein [Vibrionales bacterium SWAT-3]
Length = 857
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + A +LA R H + P+H+ ++L +R + +Q ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ L+R+P + +GG Q +SNA+ F A +R+ + + + LLA
Sbjct: 63 KLSEILDRVPKVSG---IGGDVQ---LSNAMGTLFNLCDKVAQKRQDTYISSEVFLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+I D + +++E G + ++ +EQ + ++ E +
Sbjct: 115 --------AIEDKGPLGNLLKELGLTEQKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I +VPE LR + L L + + R E E+R++ + N
Sbjct: 220 AQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L + L K+V Q + V ++N + + R+G D + K
Sbjct: 548 VSKMLEAEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAG-------LSDPN--KPI 598
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V I +S F + + +
Sbjct: 599 GSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEE 658
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L++++E+A + ++ GR+ G V + +VI
Sbjct: 659 GGYL---TEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715
Query: 778 LSCESFSSR 786
++ SSR
Sbjct: 716 MTSNLGSSR 724
>gi|84393598|ref|ZP_00992351.1| ClpB protein [Vibrio splendidus 12B01]
gi|84375807|gb|EAP92701.1| ClpB protein [Vibrio splendidus 12B01]
Length = 857
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + A +LA R H + P+H+ ++L +R + +Q ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ L+R+P + +GG Q +SN + F A +R+ S + + LLA
Sbjct: 63 KLSEILDRVPKVSG---IGGDVQ---LSNTMGTLFNLCDKVAQKRQDSYISSEVFLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+I D + +++E G + ++ +EQ + ++ E +
Sbjct: 115 --------AIEDKGPLGNLLKELGLTEQKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I +VPE LR + L L + S R E E+R++ + N
Sbjct: 220 AQRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERLKSVLN 264
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L + L K+V Q + V ++N + + R+G D + K
Sbjct: 548 VSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAG-------LSDPN--KPI 598
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V I +S F + + +
Sbjct: 599 GSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEE 658
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +VI
Sbjct: 659 GGYL---TEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715
Query: 778 LSCESFSSR 786
++ SSR
Sbjct: 716 MTSNLGSSR 724
>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 857
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT++ + A +LA R + + P+H+ + +L G +R S + L
Sbjct: 6 LTSKFQLALADAQSLALGRDNQFIEPVHLMSALLNQEGGTVRPLL---TSAGVNTANLRQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
A++RLP GG Q P SN L+ A +R +
Sbjct: 63 ELEQAISRLPQVEGA---GGDVQ-P--SNELIRVLNLCDKLAQKRNDTF----------- 105
Query: 130 IELEQLIISILDD-PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I E +++ L+D ++ +++ AG ++ +V + +EQ E + ++ +
Sbjct: 106 ISSELFVLAALEDRGNLGDILKAAGATTQKVSTAIEQMRGGEKVDDANAEDQRQALKKYT 165
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 166 VDLTERAEQGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+ +I G+VPE L++ + L L + S R E E+R++ + N
Sbjct: 219 LAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLKAVLN 264
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L ++V Q + V ++N + + R+G R G F
Sbjct: 548 VSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+VI++
Sbjct: 713 VVIMTS 718
>gi|116619644|ref|YP_821800.1| ATPase [Candidatus Solibacter usitatus Ellin6076]
gi|116222806|gb|ABJ81515.1| ATPase AAA-2 domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 869
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + V+ A ++A R GH QV H+ +L GL TA + + + + AL+
Sbjct: 6 FTEKLQEAVRAAQSIAARHGHQQVDVEHLLAALLEQEGGL--TASILTRAG-VNVDALKR 62
Query: 72 CFNVALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L+RLP S S + P ++ L A E++ + L +
Sbjct: 63 RIEGELDRLPKVSGSAAGIDQIYVTPRLNKLLTQA-------------EDEAKKLKDEYV 109
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E ++++ +D M++ G ++ + + + + P + ++ E
Sbjct: 110 SVEHVLLAAVD-------MKDLGVPRDRLLQALREVRGSQRVTSQNPEGTYEALEKYGRD 162
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A+ K LDP+ R++++ VI+ L + K N V++GE +V G+
Sbjct: 163 LTVAAATNK-------LDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLA 215
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
+I +GDVPE L++ + + L + + R E E+R++ + V G I+L + +
Sbjct: 216 VRIVRGDVPEGLKNKRVVALDMGALIAGAKYRGEFEERLKAVLKEVLDAAGE-IILFIDE 274
Query: 307 L 307
L
Sbjct: 275 L 275
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 22/194 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V K E + L L L K+V Q + V +A V++ RSG R G F
Sbjct: 545 VTKLLEGEMQKLLHLEEELHKRVIGQDEAVTAVAEAVIRARSGLKDPQRPIGSF------ 598
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F + + I +S + S
Sbjct: 599 ------IFMGPTGVGKTELARALAEYMFDDEHAMIRIDMSEYQEKHTVS-----RLVGAP 647
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L +++E+A + + ++ GR+ G V
Sbjct: 648 PGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFK 707
Query: 773 DAIVILSCESFSSR 786
+ IVI++ S+R
Sbjct: 708 NTIVIMTSNVGSAR 721
>gi|334131884|ref|ZP_08505646.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
gi|333443357|gb|EGK71322.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
Length = 861
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 30/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R H + P H+ +L G TA L + + + L+
Sbjct: 6 LTTKFQQALADAQSLAVGRDHQYIEPAHLMLALLNQDDG--STASLLARAG-VNVAPLKK 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFP-TISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
+ AL+R+ GG Q ++N L A + AQ +RG +A ++
Sbjct: 63 AVDEALSRIATVEGH---GGEVQIGRDLTNLLNLADREAQ---KRGD------QFIASEM 110
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
L+ + D + RV+++AG ++ VEQ + + ++ + +
Sbjct: 111 ---FLLAATGDKGELGRVLKQAGLERAALEKAVEQVRGGSSVGSAEAEGAREALKKYCID 167
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A+A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 168 LTERAAAGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 220
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
+I +VPE L+ + L L ++ R E E+R++ + N V GR I+
Sbjct: 221 QRIVNEEVPETLKGKRVLVLDMAGLLAGAKFRGEFEERLKSVLNEVAKDEGRIILF 276
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + + L ++V Q + V +++ + + R+G E +
Sbjct: 550 VSKMMQGERDKLLKMEDRLHQRVIGQDEAVRLVSDAIRRSRAGL---------SDENRPY 600
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S
Sbjct: 601 GSFLFLGPTGVGKTELCKTLAEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDE 660
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L ++VE+A + ++ GR+ G V + +++
Sbjct: 661 GGYL---TEAVRRKPYSVILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 717
Query: 778 LS 779
++
Sbjct: 718 MT 719
>gi|325066781|ref|ZP_08125454.1| ATP-dependent chaperone ClpB [Actinomyces oris K20]
Length = 475
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 43/303 (14%)
Query: 77 LNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLI 136
L +LPAS+ + M P S +L+AA + A + S E I E L+
Sbjct: 8 LTQLPASSGSSM-----TQPQPSRSLLAALEAASTVAKELSDEY---------ISTEHLL 53
Query: 137 ISILDD------PSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
I + P+V+R++ +AG + + + Q + + P + K+ E
Sbjct: 54 IGLAKGDTSGSAPTVARILADAGATPEALIEALPQVRGSSRVTSANPEGTYKTLEKYGTD 113
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A + LDP+ R+ ++ V++ L + K N V++GE VV G+
Sbjct: 114 LTEAAREGR-------LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 166
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGD 306
++ GDVPE+LR + + L +S R E E+R++ + ++ G ++ + +
Sbjct: 167 QRVVAGDVPESLRGKRLISLDLSGMVAGAKYRGEFEERLKAVLKEIKDSDGE-VITFIDE 225
Query: 307 LEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHP 366
L SE M+ G ++ + ++G T Y P
Sbjct: 226 LHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELRMVGATTLDEYRENIEKDP 274
Query: 367 SLE 369
+LE
Sbjct: 275 ALE 277
>gi|373850028|ref|ZP_09592829.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV5]
gi|372476193|gb|EHP36202.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV5]
Length = 904
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 25/292 (8%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A + ARRR + +V H+ + +L+ G++ A ++ L AL+L L+R
Sbjct: 58 ITDAQSEARRRNNNEVDTWHLLHALLSQENGIV-PAIVEKLG--LTTSALQLALQRELDR 114
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + + +++ L A +A Q + + + LA +I +
Sbjct: 115 LPRVSGSVDTSKVYVTQAVNDVLTRA--EEEAKQLKDEFVSVEHLFLA--------LIEV 164
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
+ +R ++ G V + + + + P ++ + + + L + A K
Sbjct: 165 AKPEAFARYLKSFGIDRRTVLKTLSELRGAQRVTTDNPEATYNALKKYGIDLVELARKGK 224
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
+DP+ R++++ I L K K N V++GE +V G+ +I +GDVP
Sbjct: 225 -------MDPVIGRDDEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVP 277
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
E L+D L + + R E E+R++ + N V+ GR I+L + +L
Sbjct: 278 EGLKDKTIFSLDMGALVAGAKYRGEFEERLKAVLNEVKQSDGR-ILLFIDEL 328
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 30/191 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E E L L L ++V Q + V + +L+ R+G R G F
Sbjct: 595 VTRLVESEREKLLRLGEVLHERVIGQDEAVQLTSEAILRARAGIKDPRRPVGSF------ 648
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F S + I +S + S R
Sbjct: 649 ------LFLGPTGVGKTELAKTLAETLFDSEAAMIRIDMSEYMEKHSVARLIGAPPG--- 699
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G
Sbjct: 700 ------YVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRT 753
Query: 769 VSLGDAIVILS 779
V + I+I++
Sbjct: 754 VDFKNTIIIMT 764
>gi|386333685|ref|YP_006029855.1| chaperone [Ralstonia solanacearum Po82]
gi|334196134|gb|AEG69319.1| chaperone [Ralstonia solanacearum Po82]
Length = 862
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 31/296 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + A +LA + + P+H+ ML G T L S + + +ALE+
Sbjct: 6 LTTRFQEALADAQSLALGNDNPYIEPVHLLLAMLRQPDGA--TKNLLSRAG-VNARALEV 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ A+ RLP G Q +L+ Q ++ G Q I
Sbjct: 63 ALDNAIKRLPQVQG----GEQVQVGRDLGSLL------QQTEKEGIKRGDQ------FIA 106
Query: 132 LEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
E ++++ DD R+ RE G + ++S ++ + + S ++ + +
Sbjct: 107 SELFLLAVADDKGEAGRIAREHGLARRALESAIDAVRGGQTVGSAEAESQREALKKYTID 166
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 LTEQARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLA 219
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+L++ + L L ++ R E E+R++ + N + G+ I+
Sbjct: 220 QRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILF 275
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + + L ++V Q + V +++ + + R+G E K
Sbjct: 551 VSKMMQGERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIA---------DENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S +
Sbjct: 602 GSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|220915533|ref|YP_002490837.1| ATP-dependent chaperone ClpB [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953387|gb|ACL63771.1| ATP-dependent chaperone ClpB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 870
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 42/260 (16%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT +A V+ A ARRR H V H+ +LA G+ R + + P
Sbjct: 6 LTVKAQEVLAAAQGEARRRDHQAVDVEHLVLALLAQEEGIARPVLEKIGADP-------- 57
Query: 72 CFNVALNRLPAST------STPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
RL AS S P + G +P +N L+ F RA E++ + L
Sbjct: 58 -------RLVASRVEDELRSLPKVSGAEPYP--ANRLLKLFDRA---------EDEARKL 99
Query: 126 LAVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSK 184
+ E L+++ +D +R +G + +V+ V++ + S ++
Sbjct: 100 KDEYVSTEHLLLAAAEDKGGAGEALRASGATPERVRQAVQEVRGGARVTSPEAESQYRAL 159
Query: 185 ESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
E L+ A K LDP+ R++++ V++ L + K N V+VG+
Sbjct: 160 EKYAKDLTDLARKGK-------LDPVIGRDDEIRRVVQILSRRTKNNPVLVGDPGVGKTA 212
Query: 243 VVRGVIDKIEKGDVPEALRD 262
+V G+ +I GDVPE L++
Sbjct: 213 IVEGLARRIVDGDVPEGLKN 232
>gi|288555417|ref|YP_003427352.1| AAA ATPase [Bacillus pseudofirmus OF4]
gi|288546577|gb|ADC50460.1| AAA-2 domain ATPase modulates CtsR MecA [Bacillus pseudofirmus OF4]
Length = 718
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 550 HEASDKSTSEPSLRLYIPEHKDLKQPLSSNRNSTPNSTSSSDIMEMEY---------VHK 600
H+ DK+ E + + +D + L + N + + ++ D ++E V K
Sbjct: 353 HKEKDKALKEENYE-AAAKLRDEEVKLEAKLNKSEDKKANVDTAQIEAIIEKKTGIPVGK 411
Query: 601 FKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEVKEE 657
+ + E + +L + L KV Q+ V +A V + R+G R G F
Sbjct: 412 LQANDQEKMKNLADQLRGKVIGQEKAVEKVAKAVRRSRAGLKAKHRPIGSF--------- 462
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRSRDE 715
F G K ++ K LA +FG+ V + +S + + S DE
Sbjct: 463 ---LFVGPTGVGKTELTKSLAEQLFGTKEAMVRLDMSEYMEKHSVSKLIGSPPGYVGHDE 519
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ E V NP+ + L++++E+A Q F + +E GR+ S G VS D +
Sbjct: 520 AG-----QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTV 574
Query: 776 VILSCES 782
+I++ +
Sbjct: 575 IIMTSNA 581
>gi|57233811|ref|YP_182121.1| chaperone ClpB [Dehalococcoides ethenogenes 195]
gi|57224259|gb|AAW39316.1| chaperone ClpB [Dehalococcoides ethenogenes 195]
Length = 812
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 41/305 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q+ T +A + + L + H+Q HV ++ GL+ + L+ +
Sbjct: 3 QEKFTEQAQEALSASQMLVQEYQHSQWDVEHVLLALIRQEKGLVGEILKE-----LKVSS 57
Query: 69 LELCFNV--ALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRGSIENQQQ 123
E+ + +L R P + +GG+ Q P I N L A N+ +
Sbjct: 58 EEITKQLVDSLKRSPKA-----VGGNIQIYPTPRIINLLQTA-------------NNEAE 99
Query: 124 PLLAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSN 181
L I E L+++I D +R++++ G +V S +++ + + S
Sbjct: 100 RLRDEFIGTEHLLVAIAGDTQGESARILKQFGIDQEKVYSALQKIRGGHRVTDARAESKY 159
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
++ L++ A K+ DP+ R++++ V++ L + K N V+VGE
Sbjct: 160 RALAKYSRDLTELAKQGKI-------DPVIGRDQEIRRVMQILSRRTKNNPVIVGEAGVG 212
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLG 297
+ GV KI DVPE+LRD K + L + + + R E E+R++ + + VR G
Sbjct: 213 KTAIAEGVAQKIADNDVPESLRDRKVMALDMGALVAGSKFRGEFEERLKAVMDEVRQSAG 272
Query: 298 RGIVL 302
I+
Sbjct: 273 EIILF 277
>gi|89099328|ref|ZP_01172205.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
gi|89085937|gb|EAR65061.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
Length = 708
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K ++ + +L +L +KV Q++ V +A V + R+G R G F
Sbjct: 399 VGKIQQDEQSKMKNLEKSLSEKVIGQEEAVKKVAKAVRRSRAGLKSKNRPIGSF------ 452
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +FGS ++ + + +S + + S
Sbjct: 453 ------LFVGPTGVGKTELTKTLAEELFGSKDSMIRLDMSEYMEKHSISKIIGSPPGYVG 506
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + E V NP+ + L++++E+A Q F + +E GR+ S G VS
Sbjct: 507 HDEAG-----QLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFK 561
Query: 773 DAIVILS 779
D+++I++
Sbjct: 562 DSVIIMT 568
>gi|424916640|ref|ZP_18340004.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392852816|gb|EJB05337.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 866
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 43/295 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVKIELEQLII 137
LP + GG+ ++ L A+ A++ S ++ L A+ IE
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAANKAGDSFVTVERLLQALAIESSASTF 124
Query: 138 SILDDPSVS-----RVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
S L + V+ +V+ + T SN EQ SL+ ++ + + K
Sbjct: 125 STLKNSGVTAQGLNQVINDIRKGRTADSSNAEQGFDSLKKFARDLTAEAREGK------- 177
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 178 ---------------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 223 RIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|311744477|ref|ZP_07718278.1| chaperone protein ClpB [Aeromicrobium marinum DSM 15272]
gi|311312282|gb|EFQ82198.1| chaperone protein ClpB [Aeromicrobium marinum DSM 15272]
Length = 872
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 143/358 (39%), Gaps = 69/358 (19%)
Query: 31 GHAQVTPLHVANTMLAASTG----LLRTACLQSHSHPLQCKALELCFNVALNRLPASTST 86
GH V P H+ +L G LL+ A + H KA L+RLP++T
Sbjct: 25 GHPTVEPAHLLTALLGQDGGTAGPLLQAAGVDPHRVAAGLKA-------DLDRLPSAT-- 75
Query: 87 PMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI--LDDPS 144
G P +S + A +RAQ G+ ++ E L+++I +D P+
Sbjct: 76 ---GSTVANPGLSRSSHAVLQRAQ-ELATGAGDDFTS--------TEHLVVAIATVDSPA 123
Query: 145 VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPR 204
+ +AG + +++ E + + + +S E + L+ A K
Sbjct: 124 RG-TLADAGATPEALQAAFESVRGTAKVTSADAEDTYQSLEKYGVDLTAVARDGK----- 177
Query: 205 VSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRD 262
LDP+ R+ ++ V++ L + K N V++GE VV G+ +I GDVP++LR
Sbjct: 178 --LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPDSLRG 235
Query: 263 VKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDLEWAEFRASSSEQV 320
+ + L +++ R E E+R++ + AE +AS QV
Sbjct: 236 RRLISLDLAAMVAGAKYRGEFEERLKAV--------------------LAEIKASEG-QV 274
Query: 321 RGYYCSIEHII---------MEIGKLVCGIGENARFWLMGIATFQSYMRCKSGHPSLE 369
+ + ++ M+ G ++ + ++G T Y P+LE
Sbjct: 275 ITFIDELHTVVGAGAGGDSSMDAGNMLKPMLARGELRMIGATTLDEYRERIEADPALE 332
>gi|261856613|ref|YP_003263896.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
gi|261837082|gb|ACX96849.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
Length = 860
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 29/296 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA+ + A +LA R H + P H+ ++ G +R QS + L
Sbjct: 6 LTAKFQMALADAQSLAVGRDHQFIEPAHLFLALIDQEGGTVRHLLTQSD---VNIGMLRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT-ISNALVAAFKRAQAHQRRGSIENQQQPLLAVKI 130
L+ LPA + G +S L K AQ QR+ + + +LA
Sbjct: 63 QLGELLDHLPAVSGAA--AGEVHLSNDLSRLLNVTDKLAQ--QRKDQFISSELFVLA--- 115
Query: 131 ELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+ D ++ ++R++G S V+ +E E + + S ++ E +
Sbjct: 116 -------AAEDKGALGELLRKSGVSKGAVEKAIETLRGGESVNDANAEESRQALEKYSID 168
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
L+ A A K LDP+ R+E++ ++ L + K N V++GE +V G+
Sbjct: 169 LTARAEAGK-------LDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 221
Query: 249 DKIEKGDVPEALRDVKCLPLSISSFRHMN--RVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE L++ + L L + + R + E+R++ + N V GR I+
Sbjct: 222 QRIVNGEVPENLKNKRVLSLDMGALLAGAKFRGDFEERLKGVLNDVAKQEGRVILF 277
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 92/230 (40%), Gaps = 30/230 (13%)
Query: 566 IPE-HKDLKQPLSSNRN-STP----NSTSSSDIMEMEY------VHKFKELNSENLTSLC 613
IPE + L+Q S+ + +TP N +I E+ V K E + L +
Sbjct: 507 IPELERQLQQAQSAEQTETTPRLLRNKVGEEEIAEVVARATGIPVAKMLEGEKDKLLRME 566
Query: 614 NALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKEETWLFFQGVDADAK 670
AL +V Q + V +A+ + + R+G R G F F G K
Sbjct: 567 EALATRVVGQDEAVKSVADAIRRSRAGLSDPNRPNGSF------------LFLGPTGVGK 614
Query: 671 EKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQSCSYIERFAEAVSN 730
++ K LA +F + + V I +S F + + + Y+ EA+
Sbjct: 615 TELTKALANFLFDTEESMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL---TEAIRR 671
Query: 731 NPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
P+ V L+++VE+A + ++ GR+ G V + +++++
Sbjct: 672 KPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTS 721
>gi|391227736|ref|ZP_10263943.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV1]
gi|391223229|gb|EIQ01649.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV1]
Length = 904
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 25/292 (8%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
+ A + ARRR + +V H+ + +L+ G++ A ++ L AL+L L+R
Sbjct: 58 ITDAQSEARRRNNNEVDTWHLLHALLSQENGIV-PAIVEKLG--LTTSALQLALQRELDR 114
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISI 139
LP + + +++ L A +A Q + + + LA +I +
Sbjct: 115 LPRVSGSVDTSKVYVTQAVNDVLTRA--EEEAKQLKDEFVSVEHLFLA--------LIEV 164
Query: 140 LDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATK 199
+ +R ++ G V + + + + P ++ + + + L + A K
Sbjct: 165 AKPEAFARYLKSFGIDRRAVLKTLSELRGAQRVTTDNPEATYNALKKYGIDLVELARKGK 224
Query: 200 VSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVP 257
+DP+ R++++ I L K K N V++GE +V G+ +I +GDVP
Sbjct: 225 -------MDPVIGRDDEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVP 277
Query: 258 EALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
E L+D L + + R E E+R++ + N V+ GR I+L + +L
Sbjct: 278 EGLKDKTIFSLDMGALVAGAKYRGEFEERLKAVLNEVKQSDGR-ILLFIDEL 328
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 30/191 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E E L L L ++V Q + V + +L+ R+G R G F
Sbjct: 595 VTRLVESEREKLLRLGEVLHERVIGQDEAVQLTSEAILRARAGIKDPRRPVGSF------ 648
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSF----SSTRADSTEDSRNK 710
F G K ++AK LA +F S + I +S + S R
Sbjct: 649 ------LFLGPTGVGKTELAKTLAETLFDSEAAMIRIDMSEYMEKHSVARLIGAPPG--- 699
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G
Sbjct: 700 ------YVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRT 753
Query: 769 VSLGDAIVILS 779
V + I+I++
Sbjct: 754 VDFKNTIIIMT 764
>gi|378953704|ref|YP_005211192.1| chaperone ClpB [Pseudomonas fluorescens F113]
gi|359763718|gb|AEV65797.1| ClpB [Pseudomonas fluorescens F113]
Length = 861
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 122 QQPLLAVKIEL-------EQLIISILDDPSVSRVMREAG--FSSTQVKSNVEQAVSLEIC 172
Q LL +EL LI+++L +P +R AG + + + NV++ +
Sbjct: 94 QDALLVANLELGCSQVGQAALILALLRNP-----LRYAGSAYQALLTRLNVDRLKDFALS 148
Query: 173 SQSTPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNF 230
Q+ PV+ + +K + L+ T T+ ++ LDP+ R+ +V +I+ L+ +RK N
Sbjct: 149 QQTHPVADHSAKPDDSLLARFTHDLTRQAR-EGQLDPVLCRDGEVRQMIDILVRRRKNNP 207
Query: 231 VVVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI 288
+VVGE +V G+ +I +VP L V+ L L + + + E E+R++ +
Sbjct: 208 IVVGEAGVGKTAIVEGLALRIAAAEVPSVLEGVELLSLDMGLLQAGASIKGEFERRLKGV 267
Query: 289 KNLVRS 294
+ V++
Sbjct: 268 IDEVKA 273
>gi|238783311|ref|ZP_04627335.1| hypothetical protein yberc0001_32870 [Yersinia bercovieri ATCC
43970]
gi|238715734|gb|EEQ07722.1| hypothetical protein yberc0001_32870 [Yersinia bercovieri ATCC
43970]
Length = 886
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 55/234 (23%)
Query: 129 KIELEQLIISILDDPSVSRVMRE--AGFSSTQVKSNVEQ----------AVSLEICSQST 176
KI L+I++L S+ + E A FS V V+Q VS + +++T
Sbjct: 111 KIRGGYLVIALLKTHSLRYQLTEISALFSQINVDQLVDQFTVITARSSENVSAPLIAETT 170
Query: 177 PVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVG 234
+++ S VL+Q + +DP+ R+E++ VI+ LM +R+ N ++ G
Sbjct: 171 EPTTSGS------VLAQYGLDLTARARKGEIDPVVGRDEEIRQVIDILMRRRQNNPLLTG 224
Query: 235 ECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEI---- 288
E VV G+ +I GDVP LRDV+ L I+ + V E E+R++ +
Sbjct: 225 EAGVGKTAVVEGLALRIIAGDVPPQLRDVQLYLLDINMLQAGAGVKGEFEKRLQSVIDEV 284
Query: 289 -----------------------------KNLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G WAE++
Sbjct: 285 QSSQTPTVLFIDEIHTLMGAGGHQGTGDAANLLKPALARGQLRTIGATTWAEYK 338
>gi|298345665|ref|YP_003718352.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063]
gi|298235726|gb|ADI66858.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063]
Length = 918
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 36/295 (12%)
Query: 6 CTIQQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQ 65
++ Q T ++ + A+ A G+A + P+H+ + +L G+ + S
Sbjct: 2 ISMDQKFTTKSQEALATALRTAGAAGNAMLEPIHLLSALLEDREGI----AFEVLSSVAD 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAH-QRRGSIENQQQP 124
A+ L LP +T G P S A++ A A Q RG
Sbjct: 58 ADAIGREVRRELASLPGAT-----GESVAEPQPSQAMLNVISAAGAKAQERGDD------ 106
Query: 125 LLAVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L++ + ++ V +++R+AG + +++ +++ + P ++ K+
Sbjct: 107 ----YVSTEHLLLGLAENEGRVGKILRDAGANDKKLRQAIKKIRGDAKVTSPNPEATFKA 162
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L+Q A +LDP+ R+ ++ VI+ L + K N V++GE
Sbjct: 163 LEKYGDDLTQRAMDG-------NLDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKT 215
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQR----VEEIKN 290
VV G+ +I GDVP++L+ + L +++ R + E+R +EEIKN
Sbjct: 216 AVVEGLAQRIVAGDVPDSLKHKHLIALDLAAMVAGAQYRGQFEERLKAVLEEIKN 270
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K SE L + L +++ QKD V ++N V + R+G R G F
Sbjct: 585 VGKLLRGESEKLLHMEEYLGQRLIGQKDAVRAVSNAVRRARAGVSDPNRPTGSF------ 638
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F I +S + + +
Sbjct: 639 ------LFLGPTGVGKTELAKALADFLFDDEKALTRIDMSEYGEKHSVA-----RLIGAP 687
Query: 715 EQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E + EAV P+ V L+++VE+A + ++ GR+ G V
Sbjct: 688 PGYVGYEEGGQLTEAVRRRPYGVVLLDEVEKAHPDVYDILLQVLDDGRLTDGQGRTVDFR 747
Query: 773 DAIVILSC 780
+ I++L+
Sbjct: 748 NVILVLTS 755
>gi|260880964|ref|ZP_05403276.2| ATP-dependent chaperone protein ClpB [Mitsuokella multacida DSM
20544]
gi|260850057|gb|EEX70064.1| ATP-dependent chaperone protein ClpB [Mitsuokella multacida DSM
20544]
Length = 878
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 136/305 (44%), Gaps = 34/305 (11%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
Q+ TA+ + ++ A +A + H ++T HV + GLL T + + KA
Sbjct: 15 QEKYTAKTLAALQSAQQIAAMKYHQEITSAHVLLALAKEPEGLLATIFEECQTDMPMLKA 74
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
L ++P+ T LG + +V RA+ + + S+++
Sbjct: 75 ---RLEQELAKIPSVKGTDRLG-------MGMDMVRVLGRAEEYAK--SMKDDY------ 116
Query: 129 KIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ E L++++ D S V + R+ + + +++++ + + + + P KS E
Sbjct: 117 -VSTEHLLLALATDGSSEVQDICRQFHLTKSAIQASIRKNRKQNVTTDN-PEEGYKSLEK 174
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L+ A A K LDP+ R+E++ IE L + K N V++GE +V
Sbjct: 175 FGRDLTAAARAGK-------LDPVIGRDEEIRRTIEILSRRTKNNPVLIGEPGVGKTAIV 227
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I GDVPE+L++ L + S R E E+R++ + N + G+ I+L
Sbjct: 228 EGLARRIVAGDVPESLKNKTLFSLDMGSLIAGAKYRGEFEERLKSVLNEIAKSDGQ-ILL 286
Query: 303 NLGDL 307
+ +L
Sbjct: 287 FIDEL 291
>gi|257792794|ref|YP_003183400.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|317489076|ref|ZP_07947601.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325831045|ref|ZP_08164369.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
gi|257476691|gb|ACV57011.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|316911808|gb|EFV33392.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325486966|gb|EGC89412.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
Length = 887
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 35/303 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA+ A ++Q + +A +Q P+H+ +L + L + + P Q +A
Sbjct: 11 LTAQEA--LQQTIVIASENESSQAEPIHMLKALLESKENNLSAIIKRIGAEPFQLQA--- 65
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ + R+P + P + P + N + A K A+ + G + LL E
Sbjct: 66 NVDAEIQRMPKVSGNPGMMSGVPGPALMNLIDNAVKIAE---KLGDSYATSEHLLIALSE 122
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNV---EQAVSLEICSQSTPVSSNKSKESNV 188
+ IL V+R EA + + + V + V E Q + K++E
Sbjct: 123 EKGAAGKILTTAGVTRKSIEAAYEELRGDTRVTDQQNKVQFEALEQYGQNLTQKAREGK- 181
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
LDP+ R E++ I+ L + K N V++GE +V G
Sbjct: 182 ------------------LDPVIGRAEEIRRTIQVLSRRTKNNPVLIGEPGTGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNL 304
+ +I GDVP +L+D + L + + R E E R++ + V+ GR I+L +
Sbjct: 224 LAQRIVAGDVPSSLKDRDLVALDLGAMVAGAKYRGEFEDRLKAVLREVKQSEGR-IILFI 282
Query: 305 GDL 307
+L
Sbjct: 283 DEL 285
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + L L + L ++V Q + V +A + + R+G R G F
Sbjct: 557 VQKMMQGEMAKLVDLEDKLHERVVGQDEAVSSVAGAIRRNRAGLSDPNRPIGSF------ 610
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSS----FSSTRADSTEDSRNK 710
F G K ++AK LA +F S V I +S FS R
Sbjct: 611 ------LFLGPTGVGKTELAKALAEYLFDSEKAMVRIDMSEYMEKFSVQRLIGAPPG--- 661
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L++++E+A + ++ GR+ G
Sbjct: 662 ------YVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRV 715
Query: 769 VSLGDAIVILSC 780
VS +AI+I++
Sbjct: 716 VSFKNAIIIMTS 727
>gi|268325367|emb|CBH38955.1| chaperone clpB [uncultured archaeon]
Length = 859
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 133 EQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLS 192
E ++++I +DPS +++ G + ++ + + P ++ E L+
Sbjct: 111 EHMLLAIAEDPSAPQILNGMGVTKARIYEALTGIRGGQRIVDQNPEEKYQALERYTRDLT 170
Query: 193 QTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDK 250
A A K LDP+ RN+++ V++ L +RK N V++G+ +V G+ +
Sbjct: 171 DLARAGK-------LDPVIGRNDEIRRVVQVLSRRRKNNPVLIGDAGVGKTAIVEGLAQR 223
Query: 251 IEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
I GDVPE L+D + + L + + R E E R++ + + G+ IVL + +L
Sbjct: 224 IINGDVPETLKDKQVVALDMGALIAGAKFRGEFEDRLKAVLKEINEAAGQ-IVLFIDEL 281
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E ++E L + L+++V Q++ + I+N + + R+G R G F
Sbjct: 552 VSKMLEGDTEKLIKMEERLKQRVVGQEEAISLISNAIRRARAGLSDPNRPIGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTR--ADSTEDSRNKRS 712
F G K ++AK LA +F V + +S F A
Sbjct: 606 ------IFLGPTGVGKTELAKALAEFLFDDERAMVRMDMSEFMERHSIARLIGAPPGYVG 659
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P+ V L +++E+A + ++ GR+ G V+
Sbjct: 660 YDEGGF-----LTEAVRRRPYSVILFDEIEKAHSDVFNLLLQILDDGRLTDGHGRTVNFR 714
Query: 773 DAIVILSCESFSS 785
+ +VI++ S+
Sbjct: 715 NTLVIMTSNVAST 727
>gi|168187707|ref|ZP_02622342.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
gi|169294451|gb|EDS76584.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
Length = 813
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V K E ++ L L L K+V Q + V IA V + R G + R G F
Sbjct: 492 VEKLTEKEADRLLKLEETLHKRVIGQNEAVKSIARAVRRARVGLKDSKRPIGSF------ 545
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K +++K LA +FG NN + I +S + A S
Sbjct: 546 ------IFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGSPPGYIG 599
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE + E V +P+ V L +++E+A + +E GR+ S G V+
Sbjct: 600 HDEGG-----QLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVNFK 654
Query: 773 DAIVILSCESFSSR 786
+ I+IL+ +SR
Sbjct: 655 NTIIILTSNVGASR 668
>gi|402077260|gb|EJT72609.1| hsp98-like protein [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 924
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 40/280 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----------------AASTGLLRTA 55
T A ++ AM+LA + H Q+ P+H+A ++L + LLR
Sbjct: 7 FTDRAKKALEDAMSLAEQHAHLQLLPVHLAVSLLDPPPDLSKDQQNPPPGGNAHTLLRQV 66
Query: 56 CLQSHSHPLQCKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRR 115
++ P + L+ L RLP+ P PT ++ L A + +
Sbjct: 67 IERAQGDP---QLLDRALKKTLVRLPSQDPPP--DNVAMAPTFNSVLRKAMELQKV---- 117
Query: 116 GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQS 175
Q+ +AV + LI ++ +DPS ++EA ++ ++ A++ ++
Sbjct: 118 -----QKDSFIAV----DHLIQALAEDPSFQNCLKEANIPKPKL---LQDAITAIRGTKR 165
Query: 176 TPVSSNKSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVV 233
+ ++E N + T +++ +DP+ R E++ V+ L + K N V++
Sbjct: 166 VDSKTADTEEENENLAKFAIDMTAMAR-EGKMDPVIGREEEIRRVVRILSRRTKNNPVLI 224
Query: 234 GECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
GE VV G+ +I DVP+ L K L L + +
Sbjct: 225 GEPGVGKTTVVEGLAQRIVNADVPDNLAACKLLSLDVGAL 264
>gi|303236051|ref|ZP_07322654.1| ATP-dependent chaperone protein ClpB [Prevotella disiens
FB035-09AN]
gi|302483924|gb|EFL46916.1| ATP-dependent chaperone protein ClpB [Prevotella disiens
FB035-09AN]
Length = 863
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 30/265 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A+ LA R G + PLH+ ++ ++ Q LQ +E
Sbjct: 6 FTIKAQEAIQAAVGLASRNGQQVIEPLHLLAGVMEKGKDVV-NYLFQKSGISLQI--VEN 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ LP + GG F +N ++ + ++ Q + +
Sbjct: 63 AVKSEIAHLPKVS-----GGEPYFSNDANKVMQ------------TTMDESQKMGDEFVS 105
Query: 132 LEQLIISILD-DPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLV 190
+E L++++L + + SR++++AG + +K+ +++ Q V + +S + N
Sbjct: 106 IEPLLLALLSVNSTASRILKDAGCTEQVLKTAIKE------LRQGEKVQT-QSGDENYQA 158
Query: 191 LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVI 248
LS+ A LDP+ R++++ V++ L + K N +++GE +V G+
Sbjct: 159 LSKYARNLVEDARAGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLA 218
Query: 249 DKIEKGDVPEALRDVKCLPLSISSF 273
+I +GDVPE L+D + L + +
Sbjct: 219 GRIIRGDVPENLKDKQLYSLDMGAL 243
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 607 ENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVD 666
E L +L + L K+V Q++ + +A+ V + R+G K K F G
Sbjct: 555 EKLLNLEHELHKRVIGQEEAITAVADAVRRSRAGLQDPK---------KPIASFIFLGTT 605
Query: 667 ADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNKRSRDEQSCSYIE 722
K ++AK LA +F I +S FS +R Y E
Sbjct: 606 GTGKTELAKALAEYLFNDETMMTRIDMSEYQEKFSVSRLIGAPPG---------YVGYDE 656
Query: 723 --RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSC 780
+ EAV P+ V L +++E+A + ++ G + + G V+ + I+I++
Sbjct: 657 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGHLTDNKGRVVNFKNTIIIMTS 716
>gi|424897192|ref|ZP_18320766.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393181419|gb|EJC81458.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 866
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG+ ++ L A+ ++ S ++ L A+ IE
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTF 124
Query: 138 SILDDPSVS-----RVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
S L + V+ +V+ + T SN EQ SL+ ++ + + K
Sbjct: 125 STLKNSGVTAQGLNQVINDIRKGRTADSSNAEQGFDSLKKFARDLTAEAREGK------- 177
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 178 ---------------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 223 RIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|417949670|ref|ZP_12592802.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
gi|342807810|gb|EGU42988.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
Length = 857
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 32/285 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T++ + A +LA R H + P+H+ ++L +R + +Q ++
Sbjct: 6 FTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ L+R+P + +GG Q +SNA+ F A +R+ + + + LLA
Sbjct: 63 KLSEILDRVPKVSG---IGGDVQ---LSNAMGTLFNLCDKVAQKRQDTYISSEVFLLA-- 114
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+I D + +++E G + ++ +EQ + ++ E +
Sbjct: 115 --------AIEDKGPLGNLLKELGLTEQKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTI 166
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 167 DLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGL 219
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I +VPE LR + L L + + R E E+R++ + N
Sbjct: 220 AQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLN 264
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E E L + L K+V Q + V ++N + + R+G D + K
Sbjct: 548 VSKMLEAEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAG-------LSDPN--KPI 598
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + V I +S F + + +
Sbjct: 599 GSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEE 658
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L++++E+A + ++ GR+ G V + +VI
Sbjct: 659 GGYL---TEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715
Query: 778 LSCESFSSR 786
++ SS+
Sbjct: 716 MTSNLGSSK 724
>gi|452974749|gb|EME74569.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
sonorensis L12]
Length = 697
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + + + L L +V QK+ V +A V + R+G K KD +
Sbjct: 386 VGKLQHDDQKKMKELEANLGSRVIGQKEAVKKVAKAVRRSRAGL-----KAKD----RPV 436
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRSRDE 715
F G K +++K LA +FG+ ++ + + +S + A S DE
Sbjct: 437 GSFLFVGPTGVGKTELSKRLAEELFGTKDSIIRLDMSEYMEKHAVSKLIGSPPGYVGHDE 496
Query: 716 QSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
+ E V NP+ + L++++E+A Q F + +E GR+ S G VS D +
Sbjct: 497 AG-----QLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTV 551
Query: 776 VILS 779
+I++
Sbjct: 552 IIMT 555
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 173 SQSTPVSSNKSKESNVLVLSQT-ASATKVSKPRVSLDPIRNEDVMYVIENLMSKRKRNFV 231
SQ+ P ++ K + L ++ T A+ T + P + R+++V VIE L + K N V
Sbjct: 58 SQAQPQTAAKKGLLDELAVNLTNAAKTGLVDPVIG----RDDEVARVIEILNRRNKNNPV 113
Query: 232 VVGECLASIEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
++GE + G+ KI +GDVP L++ + L ++S
Sbjct: 114 LIGEPGVGKTAIAEGLALKISEGDVPNKLKNKELYLLDVASL 155
>gi|421597229|ref|ZP_16040885.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium sp.
CCGE-LA001]
gi|404270657|gb|EJZ34681.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium sp.
CCGE-LA001]
Length = 879
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 34/284 (11%)
Query: 13 TAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELC 72
T + ++ A +LA R GH Q LHV +L + GL A L + +A+
Sbjct: 7 TERSRGFIQSAQSLAMREGHQQFFTLHVLKVLLDDNEGL--AAGLIDRAGG-NSRAILKA 63
Query: 73 FNVALNRLPASTSTPMLGGHCQF---PTISNALVAAFKRAQAHQRRG-SIENQQQPLLAV 128
AL ++P + GG Q P ++ AA K A ++ G S ++ LL +
Sbjct: 64 TEDALGKVPKVSG----GGAGQIYLAPELARTFDAAEK---AGEKAGDSFVTVERLLLGL 116
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E ++ + G + + + +E +T ++ + +
Sbjct: 117 TLE---------KTSEAGTILNKGGVTPQNLNAAIEALRKGRTADSATAENAYDALKKYA 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+Q A K LDP+ R+E++ I+ L + K N V++GE + G
Sbjct: 168 RDLTQAARDGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEI 288
+ +I GDVPE+L+D K L L + + R E E+R++ +
Sbjct: 221 LALRIVNGDVPESLKDKKLLSLDLGALIAGAKYRGEFEERLKAV 264
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q + V +A V + R+G R G F
Sbjct: 549 VDKMLEGEKEKLLKMEEQLSKRVVGQAEAVRAVATAVRRSRAGLQDPNRPTGSF------ 602
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++ K LA +F V + +S + + S
Sbjct: 603 ------MFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L +++E+A + ++ GR+ G V
Sbjct: 657 YDEGGA-----LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query: 773 DAIVILSC 780
+ ++I++
Sbjct: 712 NTLIIMTS 719
>gi|270159567|ref|ZP_06188223.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|289165637|ref|YP_003455775.1| endopeptidase Clp ATP-binding subunit B [Legionella longbeachae
NSW150]
gi|269987906|gb|EEZ94161.1| chaperone protein ClpB [Legionella longbeachae D-4968]
gi|288858810|emb|CBJ12724.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
longbeachae NSW150]
Length = 859
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA--- 68
LT++ + A +LA R + + P H+ +L G +C PL KA
Sbjct: 6 LTSKFQIALADAQSLALGRDNGFIEPEHLMKALLDQEGG----SC-----RPLLSKAGVN 56
Query: 69 ---LELCFNVALNRLPASTSTPMLGGHCQFPTISNAL--VAAFKRAQAHQRRGSIENQQQ 123
L + AL++LP + +GG ISNAL + A Q++ + + +
Sbjct: 57 IPLLRTLLDQALDKLPKVSG---MGGDIH---ISNALNRLLNLTDKLAQQKKDNFISSEL 110
Query: 124 PLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+LA +I ++ +SR++++ G ++ + + E + ++
Sbjct: 111 FILA----------AISEEGVLSRMLKQVGGDVKAIEKAINELRGGETVTDPNAEEQRQA 160
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L L++ A K LDP+ R++++ I+ L + K N V++GE
Sbjct: 161 LEKYTLDLTERAEQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I G+VPE L++ + L L + + R E E+R++ + N
Sbjct: 214 AIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKFRGEFEERLKAVLN 264
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L ++ Q + + ++N + + R+G R G F
Sbjct: 548 VAKMMEGEKEKLLRMEEVLHNRLIGQNEAIEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 602 ------LFLGPTGVGKTELCKALATFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILS 779
I++++
Sbjct: 713 IIVMT 717
>gi|238926153|ref|ZP_04657913.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238886043|gb|EEQ49681.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 857
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 39/291 (13%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRT---ACLQSHSHPLQ 65
Q TA + ++ A +A R H ++T HV + GLL T AC S P+
Sbjct: 3 QDKYTARTLAALQSAQQIAAMRYHQEITSAHVLLALAKEPEGLLATIFEAC--SVDLPML 60
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
LE L +P+ + LG + +V RA+ + S+++
Sbjct: 61 KARLE----KELASIPSVHGSNRLG-------MGMDMVRVLGRAEELAK--SMKDDY--- 104
Query: 126 LAVKIELEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKS 183
+ E L+++I+ D S V + RE G + + V+ +++ + S + P +S
Sbjct: 105 ----VSTEHLLLAIVTDGSEEVQAIAREFGLTKSSVQDAIQKNRKQNVTSDN-PEEGYQS 159
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
E L+ A A K LDP+ R+E++ IE L + K N V++GE
Sbjct: 160 LEKYGRDLTAAARANK-------LDPVIGRDEEIRRTIEILSRRTKNNPVLIGEPGVGKT 212
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+V G+ +I GDVPE+L++ L + + R E E+R++ + N
Sbjct: 213 AIVEGLARRIVAGDVPESLKNKTLYSLDMGALVAGAKFRGEFEERLKGVLN 263
>gi|340356550|ref|ZP_08679194.1| ATP-dependent Clp protease [Sporosarcina newyorkensis 2681]
gi|339620999|gb|EGQ25565.1| ATP-dependent Clp protease [Sporosarcina newyorkensis 2681]
Length = 707
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + + L + L K+V Q + V IA + + R+G K KD +
Sbjct: 399 VTKLQAAEQARMKGLADNLGKQVIGQAEAVDKIAKAIRRSRAGL-----KSKD----RPI 449
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K +I K LA +FGS + + + +S + A S +
Sbjct: 450 GSFLFVGPTGVGKTEITKVLAEELFGSRDALIRLDMSEYMEKHAVSKIIGSPPGYVGHEE 509
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ E + NP+ + L++++E+A Q F + +E GR+ S G VS D ++I
Sbjct: 510 AG---QLTEQIRRNPYSILLLDEIEKAHPDVQNMFLQIMEDGRLTDSHGRTVSFKDTVII 566
Query: 778 LS 779
++
Sbjct: 567 MT 568
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DPI R+++V VIE L + K N V++GE + G+ KI +GDVP L + +
Sbjct: 96 IDPIIGRDQEVKRVIETLNRRNKNNPVLIGEPGVGKTAIAEGLALKIYEGDVPVKLMNKE 155
Query: 265 CLPLSISSF 273
L ++S
Sbjct: 156 VYVLDVASL 164
>gi|94265726|ref|ZP_01289463.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium
MLMS-1]
gi|93453739|gb|EAT04115.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium
MLMS-1]
Length = 867
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 28/266 (10%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T ++ V+ A +LA+ H ++ P H+ + + G++ A LQ + A E+
Sbjct: 6 FTMKSQEAVQAAQSLAQELQHQELQPEHLLKVLFDQTDGVIAPA-LQKMGVSREKLASEI 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+RLP S G P + AFK A Q +
Sbjct: 65 GNR--LSRLP-KVSGAGAGRLYAAPALQRLFDRAFKVAAEMQDD-------------YVS 108
Query: 132 LEQLIISILDDPS--VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E L++++LDD V+RV+ + G + + + + P ++ E
Sbjct: 109 QEHLVLALLDDKDNEVARVLSKEGLTRDAFLQALTAVRGSQRVTDPNPEEKYQALEKYAR 168
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L+ A K LDP+ R+++V VI+ L + K N V++GE +V G+
Sbjct: 169 NLTDVARQGK-------LDPVIGRDDEVRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGL 221
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF 273
+I GDV + LRD + + L + S
Sbjct: 222 AQRIVNGDVSDTLRDKQVIALDMGSL 247
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E E L + L K+V Q++ + +AN V + R+G R G F
Sbjct: 553 VDKLLEGEKEKLVAADGELSKRVVGQREAISAVANAVRRARAGLQDPNRPLGSF------ 606
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++A+ LA +F + + + +S F + +
Sbjct: 607 ------IFMGPTGVGKTELARSLAAFLFDTEKAMIRLDMSEFMEKHSVARLIGAPPGYVG 660
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L +++E+A + ++ GR+ G V +
Sbjct: 661 YEEGGYL---TEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDGQGRTVDFKNT 717
Query: 775 IVILSC 780
I+I++
Sbjct: 718 ILIMTS 723
>gi|408374171|ref|ZP_11171861.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
gi|407766056|gb|EKF74503.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
hongdengensis A-11-3]
Length = 861
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 132/300 (44%), Gaps = 29/300 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LTA + A +LA +G++ + P+H+ ++ G + ++ ++
Sbjct: 6 LTARLQEALSDAQSLAVGQGNSTIEPVHLMLALMQQQGGAAKPLLEKTGANSADVIT--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
N+A+ +LP ++ G Q ++ R +A QR + + LLA
Sbjct: 63 ALNMAVEKLPTVSN---FNGDVQMGQALGRMLNLADR-EAQQRGDQYLSTEVVLLA---- 114
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
+ D+ + ++++ AG + + + + E + ++ + + L
Sbjct: 115 ------ACDDNGELGKIIKNAGVTKKVLADKIAEVRGGEAVNDPNAEDKREALDKYTVNL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
++ A + K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 169 TERAESGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVLNLGDL 307
+I G+VPE L+D + L L +++ R E E+R++ + N + GR I+L + +L
Sbjct: 222 RIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERLKAVLNELAKQEGR-IILFIDEL 280
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL ++V Q + V +AN V + R+G R G F
Sbjct: 552 VSKMLEGEKDKLLRMEEALHQRVVGQDEAVEAVANAVRRSRAGLSDPNRPNGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + V I +S F + +
Sbjct: 606 ------LFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVG 659
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 660 YEEGGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 716
Query: 775 IVILS 779
+V+++
Sbjct: 717 VVVMT 721
>gi|341614681|ref|ZP_08701550.1| ATP-dependent Clp protease [Citromicrobium sp. JLT1363]
Length = 859
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T A ++ A T A R H ++TPLH+ +L + G+ ++ P++ E
Sbjct: 6 FTDRAKGFLQSAQTTAIRLNHQRITPLHILKVLLDDAEGMAAGLVQRAGGDPVRA---EQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLLAVK 129
+ L R+PA + + G P + N V +AQ A + S ++ L+A
Sbjct: 63 RVDDELARIPAVSGS----GAQASPGLDNDSVRVLDQAQQIAEKSGDSFVTVERLLVA-- 116
Query: 130 IELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
+++ + + EAG + +E+A+ E+ T ++N + + +
Sbjct: 117 -------LALASNSKAGSALAEAGVDA----KALERAIG-ELRKGKTADTANAEQAYDAM 164
Query: 190 V-----LSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEG 242
L+Q A K LDP+ R+E++ ++ L + K N ++GE
Sbjct: 165 QKYARDLTQAARDGK-------LDPVIGRDEEIRRTVQILARRTKNNPALIGEPGTGKTA 217
Query: 243 VVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGI 300
+ G+ +I GDVP++L++ + L + + R E E+R++ + + V+ G+ I
Sbjct: 218 IAEGLALRIANGDVPDSLKNRTLMALDMGALIAGAKYRGEFEERLKAVLDEVKGSDGQII 277
Query: 301 VL 302
+
Sbjct: 278 LF 279
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V + E + L + AL K+V QKD V ++ V + R+G KD +
Sbjct: 549 VDRMLEGERDKLLRMEEALGKRVIGQKDAVEAVSKAVRRARAG-------LKDPG--RPL 599
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA+ +F N V I +S F A +
Sbjct: 600 GSFLFLGPTGVGKTELTKALAQFLFDDDNAMVRIDMSEFMEKHAVA-----RLIGAPPGY 654
Query: 718 CSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E E+V P++V L ++VE+A + ++ GR+ G V + +
Sbjct: 655 VGYEEGGVLTESVRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVDFSNTL 714
Query: 776 VILSC 780
+IL+
Sbjct: 715 IILTS 719
>gi|357033114|ref|ZP_09095044.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
morbifer G707]
gi|356413271|gb|EHH66928.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
morbifer G707]
Length = 868
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 10 QGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTML----AASTGLLRTACLQSHSHPLQ 65
Q T + ++ A T+A R H Q+TP H+ +L A++GL+R A P
Sbjct: 4 QKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAG----GDP-- 57
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPL 125
K ++ + AL +LP + GG P + V A+A + + Q
Sbjct: 58 -KVVQQANDAALAKLPQ-----VQGGGAGQPQATPDFVRLLDSAEAAAKAAGDSHVAQ-- 109
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSN---VEQAVSLEICSQSTPVSSNK 182
++L+I+I + AG + Q K++ +E+AV+ +I T S+
Sbjct: 110 -------DRLLIAIAASNT------PAGKALAQGKADAAALERAVA-QIRKGRTVTSA-- 153
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
S E+ L + A LDP+ R+E++ I+ L + K N V++GE
Sbjct: 154 SAENTFDALKKYARDVTAVAQAGKLDPVIGRDEEIRRTIQVLARRSKNNPVLIGEPGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+V G+ +I GDVPEALR+ K + L + + R E E+R++ + + + G
Sbjct: 214 TAIVEGLALRIVNGDVPEALRNKKLMSLDMGALIAGAKYRGEFEERLKAVLKEIEAAEGE 273
Query: 299 GIVL 302
I+
Sbjct: 274 IILF 277
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E L + + L ++V Q+ + ++N V + R+G R G F
Sbjct: 551 VDRMLEGERAKLMRMEDVLRERVVGQEQALVAVSNAVRRARAGLQDPNRPIGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADS--TEDSRNKRS 712
F G K ++AK LA+ +F + I +S F A S
Sbjct: 605 ------LFLGPTGVGKTELAKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPGYVG 658
Query: 713 RDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
DE EAV P++V L ++VE+A + ++ GR+ G V
Sbjct: 659 YDEGGV-----LTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRVVDFR 713
Query: 773 DAIVILSC 780
+ I+IL+
Sbjct: 714 NTIIILTS 721
>gi|375088305|ref|ZP_09734645.1| hypothetical protein HMPREF9703_00727 [Dolosigranulum pigrum ATCC
51524]
gi|374562343|gb|EHR33673.1| hypothetical protein HMPREF9703_00727 [Dolosigranulum pigrum ATCC
51524]
Length = 725
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 578 SNRNSTPNSTSSS--DIMEMEY---VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIAN 632
S + TPN T +I+E++ V + KE L L ++L ++V Q + + +A
Sbjct: 387 SPESKTPNVTEQDIINIIEIKTGIPVGELKEKEQTQLRDLEDSLAEQVVGQAEAIEKVAK 446
Query: 633 TVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIA 692
+ + R G +R+K E ++LF G K ++AK LA+ +FGS + V +
Sbjct: 447 AIRRNRIG-LRKK-------ERPIGSFLFL-GPTGVGKTELAKSLAQELFGSKESLVRLD 497
Query: 693 LSSFSSTRADS--TEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQK 750
+S + + S DE + E V NP+ + L++++E+A
Sbjct: 498 MSEYMEKHSTSRLIGSPPGYVGYDEAG-----QLTETVRRNPYSLILVDEIEKAHPDVLN 552
Query: 751 GFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACS 791
F + ++ G + S G V+ + I+I++ + SS + A S
Sbjct: 553 MFLQILDDGHLTDSQGRTVNFKETIIIMTSNAGSSDNLAAS 593
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
++DPI R+ ++ VIE L + K N V++GE VV G+ +KI +VPE L D
Sbjct: 110 NIDPIIGRDSEIERVIEILNRRTKNNPVLIGEAGVGKTAVVEGLANKIVNAEVPEKLMDK 169
Query: 264 KCLPLSISSF 273
+ + L ++S
Sbjct: 170 EVIRLDVASL 179
>gi|312869862|ref|ZP_07730002.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris PB013-T2-3]
gi|417886161|ref|ZP_12530309.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris F0423]
gi|311094602|gb|EFQ52906.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris PB013-T2-3]
gi|341594028|gb|EGS36839.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
oris F0423]
Length = 732
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 25/242 (10%)
Query: 571 DLKQPLSSNRNSTPNSTSSSDI------MEMEYVHKFKELNSENLTSLCNALEKKVPWQK 624
DLK+ LS N + + D+ M V K + E L + LE KV Q
Sbjct: 363 DLKKQLSQNSEDEKVTATPEDVANAVEQMTGIPVSKIGASDVERLKDMDKRLEGKVIGQD 422
Query: 625 DTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEETWLFFQGVDADAKEKIAKELARLVFGS 684
+ V +A + + R+G D E ++LF G K ++AK+LA +FGS
Sbjct: 423 EAVEAVARAIRRNRAGF--------DEGESPIGSFLFV-GPTGVGKTELAKQLALDMFGS 473
Query: 685 HNNFVSIALSSFSSTRADS--TEDSRNKRSRDEQSCSYIERFAEAVSNNPHRVFLIEDVE 742
N+ + + +S +S A S + D+ S + E+ V +P+ + L++++E
Sbjct: 474 KNDIIRLDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTEK----VRRHPYSIILLDEIE 529
Query: 743 QADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVILSCESFSSRSRACSPPTKQKSDGCE 802
+A+ + ++ GR+ G+ + + ++I + S+ + P K +D E
Sbjct: 530 KANPQVITLLLQVLDDGRLTDGQGNTIDFKNTVIIAT----SNAGYSNDAPVKLGNDNDE 585
Query: 803 EE 804
E+
Sbjct: 586 ED 587
>gi|417990071|ref|ZP_12630563.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
A2-362]
gi|410536272|gb|EKQ10871.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
A2-362]
Length = 741
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V + K L +L LEK V Q + V +A+ + + R G + R G F
Sbjct: 421 VGELKAQEQAQLKNLAGDLEKHVIGQNEAVDKVASAIRRNRIGFNKSGRPIGSF------ 474
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNK 710
F G K ++AK+LA+ +FGS + + +S FS ++ +
Sbjct: 475 ------LFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPG--- 525
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E V NP+ + L++++E+A F + ++ GR+ S G
Sbjct: 526 ------YVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRT 579
Query: 769 VSLGDAIVILSCESFSSRSRA 789
VS D I+I++ + S+ + A
Sbjct: 580 VSFKDTIIIMTSNAGSTDAEA 600
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R++++ VIE L + K N V++GE VV G+ KI GDVP L+D
Sbjct: 119 IDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIANGDVPSKLQDRH 178
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEI 288
+ L + S R + EQR++++
Sbjct: 179 VIRLDVVSLVQGTGIRGQFEQRMQQL 204
>gi|209551097|ref|YP_002283014.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536853|gb|ACI56788.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 866
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG+ ++ L A+ ++ S ++ L A+ IE
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTF 124
Query: 138 SILDDPSVS-----RVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
S L + V+ +V+ + T SN EQ SL+ ++ + + K
Sbjct: 125 STLKNSGVTAQGLNQVINDIRKGRTADSSNAEQGFDSLKKFARDLTAEAREGK------- 177
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 178 ---------------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 223 RIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|453072930|ref|ZP_21975943.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
gi|452756700|gb|EME15108.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
Length = 877
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A +A R GH +V H+ ++ GL+ Q+ ++ +AL
Sbjct: 6 LTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQDGLVPRLLEQAGAN---VEALRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
+ L+R P + G I+ L A+ +R L +
Sbjct: 63 DLDRELSRRPKVSGPGATPGQVM---ITQRLAKLLDAAEREAKR---------LKDSYVS 110
Query: 132 LEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+E L++++ ++ S S RV+ G + + + + + + +TP + ++ E
Sbjct: 111 VEHLVMALSEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQRVTSATPEGAYEALEKYG 170
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L A K LDP+ R+ ++ V + L K K N V++G+ +V G
Sbjct: 171 RDLVSEGRAGK-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEG 223
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
+ +I +GDVPE LRD L + S R E E+R++ + + V++ GR
Sbjct: 224 LAQRIVRGDVPEGLRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGR 277
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ V++ RSG R G F
Sbjct: 558 VARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRPIGSF------ 611
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F S +N V + +S + R+ SR
Sbjct: 612 ------IFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQE---------RHTVSRL 656
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L +++E+A + ++ GRI S G +
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 717 VDFRNTVIIMTS 728
>gi|375092863|ref|ZP_09739128.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
gi|374653596|gb|EHR48429.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
Length = 889
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 15/185 (8%)
Query: 130 IELEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ +E L+I+++++ + + RV+ E G + + + + + P + ++ +
Sbjct: 110 VSVEHLVIALIEEGTTTAAGRVLHEHGLTRDTFLQALTAIRGNQRVTSAMPEVAYEALDK 169
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A+A K LDP+ R+ ++ V++ L K K N V++G+ +V
Sbjct: 170 YGRDLVADAAAGK-------LDPVIGRDSEIRRVVQILSRKTKNNPVLIGDPGVGKTAIV 222
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ +I +GDVPE LRD L + S R E E+R++ + N V++ GR I+L
Sbjct: 223 EGLAQRIHRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLNEVKAAEGR-ILL 281
Query: 303 NLGDL 307
+ +L
Sbjct: 282 FVDEL 286
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 30/192 (15%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + +E E L L L ++V Q + V +A+ +++ RSG R G F
Sbjct: 557 VSRLQEGEREKLLRLDEILHERVVGQDEAVQLVADAIIRARSGIKDPRRPIGSF------ 610
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++AK LA +F + +N V + +S + R+ SR
Sbjct: 611 ------VFLGPTGVGKTELAKTLAAALFDTADNMVRLDMSEYQE---------RHTVSRL 655
Query: 715 EQSC-SYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
+ Y+ + EAV P+ V L +++E+A + ++ GR+ + G
Sbjct: 656 VGAPPGYVGFEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQVLDDGRLTDAQGRT 715
Query: 769 VSLGDAIVILSC 780
V + ++I++
Sbjct: 716 VDFRNTVIIMTS 727
>gi|194289894|ref|YP_002005801.1| chaperone [Cupriavidus taiwanensis LMG 19424]
gi|193223729|emb|CAQ69736.1| Chaperone [Cupriavidus taiwanensis LMG 19424]
Length = 862
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 123/297 (41%), Gaps = 33/297 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + +A +LA + + P HV +L+ G + ++ + + L+
Sbjct: 6 LTTRFQEALAEAQSLALANDNQYIDPQHVLRALLSQDDGAAKALLARAG---VNVQGLQT 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNAL-VAAFKRAQAHQRRGSIENQQQPLLAVKI 130
+ A+ RLP T + + NA A KR I
Sbjct: 63 ALDAAIKRLPQVQGTNEVQIGRDLVNLLNATEKEALKRGDQF-----------------I 105
Query: 131 ELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVL 189
E ++++ DD R+ RE G + ++S ++ E + + ++ + +
Sbjct: 106 ASELFLLAVSDDKGDAGRIARENGLNRKSLESAIQAVRGGESVNSAEAEGQREALKKYTI 165
Query: 190 VLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGV 247
L++ A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 166 DLTERARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGL 218
Query: 248 IDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I G+VPE+L++ + L L ++ R E E+R++ + N V G+ IV
Sbjct: 219 AQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVF 275
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + E L + L +V Q + V +++ + + R+G E K
Sbjct: 551 VSKMMQGEREKLLKMEERLHARVVGQDEAVRLVSDAIRRSRAGLA---------DENKPY 601
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++ K LA +F S + + I +S F + S +
Sbjct: 602 GSFLFLGPTGVGKTELCKALAEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEE 661
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
Y+ EAV P+ V L+++VE+A + ++ GR+ G V + +++
Sbjct: 662 GGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718
Query: 778 LSC 780
++
Sbjct: 719 MTS 721
>gi|402838574|ref|ZP_10887079.1| ATP-dependent chaperone protein ClpB [Eubacteriaceae bacterium
OBRC8]
gi|402272788|gb|EJU22004.1| ATP-dependent chaperone protein ClpB [Eubacteriaceae bacterium
OBRC8]
Length = 862
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E + L SL + L K+V Q + V +AN++L+ RSG KD K
Sbjct: 552 VSKLVETERDKLLSLESILHKRVIGQDEAVTSVANSILRARSG-------LKDPR--KPI 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK L++ +F S +N + I +S + +
Sbjct: 603 GSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVA-----RLIGAPPGY 657
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ + L +++E+A + ++ GR+ S G V+ D +
Sbjct: 658 VGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFKDTV 717
Query: 776 VILSC 780
VI++
Sbjct: 718 VIMTS 722
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R +++ I L + K N V++GE VV G+ +I K DVP++L+D
Sbjct: 179 LDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSLKDKT 238
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + S R E E+R++ I + GR I+
Sbjct: 239 IFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMF 278
>gi|333367821|ref|ZP_08460054.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
gi|332978323|gb|EGK15049.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
Length = 862
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 43/289 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T + + ++QA +LA R H ++P+H+ +L + + + C Q
Sbjct: 6 FTQKLQAALQQAQSLAIGRDHTSISPIHIMAALLEDESNI--SICQQ------------- 50
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSI------ENQQQPL 125
A S P L + N V A + + S+ + Q Q
Sbjct: 51 ----------AGASIPGLKNGVA-KALENEAVIANPTGEVNLNPESVRVLNLADRQAQKA 99
Query: 126 LAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
I E +++ + + ++ +EAG +S ++K+ +EQ + +
Sbjct: 100 GDDYIATEWVMLVLAEQGDTKKIFKEAGVTSEKLKAVIEQLRGEQTVDSQNAEDQRDALN 159
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +
Sbjct: 160 KYTINLTERAEMGK-------LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAI 212
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
V G+ KI GDVPE LR + L L + + R E E+R++ + N
Sbjct: 213 VEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERLKNVLN 261
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 28/218 (12%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V++ + E + ++ L ++V Q + V +AN V + R+G R G F
Sbjct: 552 VNRMLQGEREKMLAMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSF------ 605
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 606 ------LFLGPTGVGKTELTKSLANFLFDSEDAMVRIDMSEFMEKHSVS-----RLVGAP 654
Query: 715 EQSCSYIER--FAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLG 772
Y E EAV P+ V L ++VE+A + ++ GR+ S G V
Sbjct: 655 PGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFK 714
Query: 773 DAIVILSCESFSSRSRACSPPTKQKSDGCEEEKGAAME 810
+ ++I++ S + + + D EE K A ME
Sbjct: 715 NTVIIMTSNLGSHKIQEMA------GDDYEEIKSAVME 746
>gi|88809567|ref|ZP_01125074.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. WH 7805]
gi|88786317|gb|EAR17477.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. WH 7805]
Length = 872
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 130 IELEQLIISILDDPSVSR-VMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
I +E L++++ DD R ++ +AG +K+ + + + P S +S E
Sbjct: 107 ISVEHLLLALADDSRCGRRLLTQAGADPDSLKNAINAVRGSQTVTDQNPEGSYESLEKYG 166
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
L+ A K LDP+ R+E++ I+ L + K N V++GE +V G
Sbjct: 167 RDLTAAARDGK-------LDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEG 219
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I GDVP+AL++ + + L + S R E E+R++ + V + G GIVL
Sbjct: 220 LAQRIVNGDVPQALQNRQLIALDMGSLIAGAKYRGEFEERLKAVLKEVTASDG-GIVL 276
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K + L SL L ++V Q+ V +A+ + + R+G D + +
Sbjct: 555 VAKLVQSEMAKLLSLETELHERVVGQQQAVTAVADAIQRSRAG-------LSDPN--RPI 605
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K +++K LA +F S + V I +S + S ++
Sbjct: 606 ASFLFLGPTGVGKTELSKALAAQLFDSEDAMVRIDMSEYMEKHTVSRLIGAPPGYVGYEA 665
Query: 718 CSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAIVI 777
+ EAV P+ V L ++VE+A + ++ GR+ G V +A++I
Sbjct: 666 GG---QLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLI 722
Query: 778 LSC 780
L+
Sbjct: 723 LTS 725
>gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibacterium freudenreichii subsp.
shermanii]
Length = 729
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 45/304 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPL------Q 65
LT + V A+ LA +G+ P+H+ + ML +S PL
Sbjct: 6 LTTMSRDAVTAAVRLALTKGNPTAEPVHLLHAMLMVP---------ESSVAPLLKAVGAD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQ---Q 122
++ + A+++LP+S+ G P +S AL A A R + +Q
Sbjct: 57 AARVDGAASAAIDKLPSSS-----GSSVAQPQLSGALARVL--ADAETRADKLGDQFVST 109
Query: 123 QPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
+ LL E++ +IL V+ E F+ ++ + A +S S
Sbjct: 110 EHLLIALAEVDSDAKNILASNGVTTAALEKAFNDSRGDKRITSA-------ESEGGESAL 162
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
K S + L+Q A K LDP+ R+ ++ V + L + K N V++GE
Sbjct: 163 DKYS--IDLTQRAKDGK-------LDPVIGRDSEIRRVAQVLSRRTKNNPVLIGEAGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
VV G+ +I KGDVP++L+ + + L ++S R E E+R++ + N ++S G+
Sbjct: 214 TAVVEGLAQRIVKGDVPDSLKGRRLVSLDLASMVAGAKYRGEFEERLKAVLNEIKSAEGQ 273
Query: 299 GIVL 302
I
Sbjct: 274 IITF 277
>gi|363893635|ref|ZP_09320730.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium ACC19a]
gi|361963437|gb|EHL16509.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium ACC19a]
Length = 862
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E + L SL L K+V Q + V +AN++L+ RSG KD K
Sbjct: 552 VSKLVETERDKLLSLETILHKRVIGQDEAVTSVANSILRARSG-------LKDPR--KPI 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK L++ +F S +N + I +S + +
Sbjct: 603 GSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVA-----RLIGAPPGY 657
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ + L +++E+A + ++ GR+ S G V+ D +
Sbjct: 658 VGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFKDTV 717
Query: 776 VILSC 780
VI++
Sbjct: 718 VIMTS 722
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R +++ I L + K N V++GE VV G+ +I K DVP++L+D
Sbjct: 179 LDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSLKDKT 238
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + S R E E+R++ I + GR I+
Sbjct: 239 IFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMF 278
>gi|52079919|ref|YP_078710.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404488801|ref|YP_006712907.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52347792|gb|AAU40426.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
licheniformis DSM 13 = ATCC 14580]
Length = 698
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + + + L L +V QK+ V +A V + R+G R G F
Sbjct: 387 VGKLQHDDQKKMKELEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGSF------ 440
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +FG+ + + + +S + A S
Sbjct: 441 ------LFVGPTGVGKTELSKRLAEELFGTKDAIIRLDMSEYMEKHAVSKLIGSPPGYVG 494
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 495 HEEAG---QLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDT 551
Query: 775 IVILSCESFSSRSR 788
++I++ + S R
Sbjct: 552 VIIMTSNAGVSEKR 565
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+++V VIE L + K N V++GE V G+ KI +GDVP L++ +
Sbjct: 88 IDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAVAEGLALKIAEGDVPNKLKNKE 147
Query: 265 CLPLSISSF 273
L ++S
Sbjct: 148 LYLLDVASL 156
>gi|432339539|ref|ZP_19589245.1| ATP-binding subunit of heat shock protein ClpB, partial
[Rhodococcus wratislaviensis IFP 2016]
gi|430775213|gb|ELB90752.1| ATP-binding subunit of heat shock protein ClpB, partial
[Rhodococcus wratislaviensis IFP 2016]
Length = 562
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 44/310 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ +++A +A R GH +V H+ ++ GL+ Q+ ++ AL
Sbjct: 6 LTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGAN---VDALRS 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+R P + G TI+ L A+ +R L +
Sbjct: 63 DLERELSRRPKVSGPGATPGQV---TITQRLAKLLDAAEREAKR---------LKDSYVS 110
Query: 132 LEQLIISILDDPSVS---RVM------REAGFSS-TQVKSNVEQAVSLEICSQSTPVSSN 181
+E L++++ ++ S S RV+ REA ++ T+V+ N + + +TP +
Sbjct: 111 VEHLVMALSEEGSASAAGRVLASHGVTREAFLTALTKVRGN-------QRVTSATPEGAY 163
Query: 182 KSKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLAS 239
++ E L A K LDP+ R+ ++ V + L K K N V++G+
Sbjct: 164 EALEKYGRDLVSEGRAGK-------LDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVG 216
Query: 240 IEGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLG 297
+V G+ +I +GDVPE LRD L + S R E E+R++ + + V++ G
Sbjct: 217 KTAIVEGLAQRIVRGDVPEGLRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEG 276
Query: 298 RGIVLNLGDL 307
R I+L + +L
Sbjct: 277 R-ILLFVDEL 285
>gi|363892184|ref|ZP_09319352.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM2]
gi|361964134|gb|EHL17178.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM2]
Length = 862
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E + L SL + L K+V Q + V +AN++L+ RSG KD K
Sbjct: 552 VSKLVETERDKLLSLESILHKRVIGQDEAVTSVANSILRARSG-------LKDPR--KPI 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK L++ +F S +N + I +S + +
Sbjct: 603 GSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVA-----RLIGAPPGY 657
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ + L +++E+A + ++ GR+ S G V+ D +
Sbjct: 658 VGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFKDTV 717
Query: 776 VILSC 780
VI++
Sbjct: 718 VIMTS 722
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R +++ I L + K N V++GE VV G+ +I K DVP++L+D
Sbjct: 179 LDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSLKDKT 238
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + S R E E+R++ I + GR I+
Sbjct: 239 IFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMF 278
>gi|302870468|ref|YP_003839105.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
gi|302573327|gb|ADL49529.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
Length = 879
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 45/367 (12%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT ++ + A T A R GH +V H+ +L GL Q+ + P Q +
Sbjct: 6 LTQKSQEALHDAQTKALRFGHVEVDGEHLLLALLDQPDGLAPRLLAQAGADPDQLRN--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPT--ISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
L R P + G F T +S L AA + A+ ++++
Sbjct: 63 SVEGELGRRPRVSGPGAQPGQV-FVTQRLSRLLDAADREAK------RLKDEY------- 108
Query: 130 IELEQLIISILDDPSVS---RVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
+ +E L+++++++ S S R +++ G + ++ + + + + P + ++ +
Sbjct: 109 VSVEHLLLALVEEGSSSAAGRALKDQGLTRDRLLGALTGIRGNQRVTSANPEVAYEALDK 168
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
L A A K LDP+ R++++ V++ L K K N V++G+ +V
Sbjct: 169 YGRDLVADARAGK-------LDPVIGRDDEIRRVVQILSRKTKNNPVLIGDPGVGKTAIV 221
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
G+ ++ GDVPE LRD L + S R E E+R++ + + V++ GR I+L
Sbjct: 222 EGLAQRVANGDVPEGLRDKTVFSLDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGR-ILL 280
Query: 303 NLGDLEWAEFRASSSEQVRGYYCSIEHIIMEIGKLVCGIGENARFWLMGIATFQSYMRCK 362
+ +L SE M+ G ++ + ++G T Y +
Sbjct: 281 FVDELHTVVGAGGGSEGA-----------MDAGNMLKPMLARGELHMIGATTLDEYRKHI 329
Query: 363 SGHPSLE 369
+LE
Sbjct: 330 EKDAALE 336
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 30/211 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGT---MRRKGKFKDHSEV 654
V + E + L L L ++V Q + V +A+ V++ RSG R G F
Sbjct: 557 VSRLVEGERQKLLRLDEILHERVVGQDEAVQLVADAVIRARSGVKDPRRPIGSF------ 610
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSR- 713
F G K ++AK LA +F + +N V + +S + R+ SR
Sbjct: 611 ------LFLGPTGVGKTELAKTLAAALFDTEDNMVRLDMSEYQE---------RHTVSRL 655
Query: 714 ---DEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + EAV P+ V L ++VE+A + ++ GR+ + G
Sbjct: 656 VGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQLLDDGRLTDAQGRT 715
Query: 769 VSLGDAIVILSCESFSSRSRACSPPTKQKSD 799
V + +V+++ S A P + D
Sbjct: 716 VDFRNTVVVMTSNIGSQHLLAGVTPDGEIKD 746
>gi|424872521|ref|ZP_18296183.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168222|gb|EJC68269.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 866
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 43/295 (14%)
Query: 20 VKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNR 79
++ A T A +GH Q TP HV +L G+ + ++ KA L + AL +
Sbjct: 14 IQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGG---DAKAARLANDAALAK 70
Query: 80 LPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG--SIENQQQPLLAVKIELEQLII 137
LP + GG+ ++ L A+ ++ S ++ L A+ IE
Sbjct: 71 LPKIS-----GGNGNI-YLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTF 124
Query: 138 SILDDPSVS-----RVMREAGFSSTQVKSNVEQAV-SLEICSQSTPVSSNKSKESNVLVL 191
S L + V+ +V+ + T SN EQ SL+ ++ + K
Sbjct: 125 STLKNAGVTAQGLNQVINDIRKGRTADSSNAEQGFDSLKKFARDLTAEARDGK------- 177
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 178 ---------------LDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAL 222
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+I GDVPE+L+D K + L + + R E E+R++ + N V++ G I+
Sbjct: 223 RIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILF 277
>gi|319646264|ref|ZP_08000494.1| ClpE protein [Bacillus sp. BT1B_CT2]
gi|317392014|gb|EFV72811.1| ClpE protein [Bacillus sp. BT1B_CT2]
Length = 698
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + + + L L +V QK+ V +A V + R+G R G F
Sbjct: 387 VGKLQHDDQKKMKELEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGSF------ 440
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +FG+ + + + +S + A S
Sbjct: 441 ------LFVGPTGVGKTELSKRLAEELFGTKDAIIRLDMSEYMEKHAVSKLIGSPPGYVG 494
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 495 HEEAG---QLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDT 551
Query: 775 IVILSCESFSSRSR 788
++I++ + S R
Sbjct: 552 VIIMTSNAGVSEKR 565
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+++V VIE L + K N V++GE V G+ KI +GDVP L++ +
Sbjct: 88 IDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAVAEGLALKIAEGDVPNKLKNKE 147
Query: 265 CLPLSISSF 273
L ++S
Sbjct: 148 LYLLDVASL 156
>gi|386826620|ref|ZP_10113727.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
gi|386427504|gb|EIJ41332.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
Length = 863
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 28/283 (9%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + +A +LA R H + P H+ ++ + + ++ ++ Q ++
Sbjct: 6 LTTRFQQALSEAQSLAVGRNHRFIEPAHILFALIDQNDSSVGHLLMRVGTNINQLRS--- 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
L+RLP ++ G +N L+ + A +RR + + LLAV
Sbjct: 63 GLTEILDRLPTTSGRE---GELHISNDTNRLLNITDKL-AQKRRDQFISSELFLLAV--- 115
Query: 132 LEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVL 191
LE+ ++ ++R+AG T ++ +EQ E + ++ E + L
Sbjct: 116 LEE-------QGTLGELLRKAGVDKTALEKAIEQMRGGESVNDPNAEEKRQALEKYTIDL 168
Query: 192 SQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVID 249
+Q A K LDP+ R++++ I+ L + K N V++GE +V G+
Sbjct: 169 TQRAIQGK-------LDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221
Query: 250 KIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
+I G+VPE L+ + L L + + R E E+R++ + N
Sbjct: 222 RIINGEVPEGLKGKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K E + L + AL ++V Q + V ++N + + R+G R G F
Sbjct: 548 VSKMLEGERDKLLRMEEALHQRVVGQSEAVKLVSNAIRRSRAGLADPNRPNGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F + + I +S F +
Sbjct: 602 ------LFLGPTGVGKTELCKALAGFLFDTEEAMIRIDMSEFMEKHTVARLIGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRKPYSVILLDEVEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILSC 780
+++++
Sbjct: 713 VIVMTS 718
>gi|251778894|ref|ZP_04821814.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083209|gb|EES49099.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 814
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 600 KFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEVKE 656
K E SE L L N LEK+V Q + V IA V + R G R G F
Sbjct: 496 KLTEKESEKLLKLENILEKRVIGQTEAVESIAKAVRRARVGIKDPNRPIGTF-------- 547
Query: 657 ETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQ 716
F G K +++K LA +FG N+ + I +S + + + S
Sbjct: 548 ----IFLGPTGVGKTELSKALAEAMFGDENSIIRIDMSEYMESNSVSKLIG--------S 595
Query: 717 SCSYIE-----RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSL 771
YI + EAV P+ V L++++E+A + +E GR+ S G V+
Sbjct: 596 PPGYIGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGKVVNF 655
Query: 772 GDAIVILS 779
+ IVI++
Sbjct: 656 KNTIVIMT 663
>gi|227534738|ref|ZP_03964787.1| ATP-binding subunit of chaperone [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|301066806|ref|YP_003788829.1| Clp protease/DnaK/DnaJ chaperone ATP-binding subunit [Lactobacillus
casei str. Zhang]
gi|417980952|ref|ZP_12621629.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
12A]
gi|417983778|ref|ZP_12624414.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
21/1]
gi|417993415|ref|ZP_12633763.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
CRF28]
gi|417996630|ref|ZP_12636908.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
M36]
gi|418002452|ref|ZP_12642570.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
UCD174]
gi|418011192|ref|ZP_12650958.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lc-10]
gi|227187494|gb|EEI67561.1| ATP-binding subunit of chaperone [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|300439213|gb|ADK18979.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus casei str. Zhang]
gi|410523888|gb|EKP98807.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
12A]
gi|410528047|gb|EKQ02909.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
21/1]
gi|410531523|gb|EKQ06245.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
CRF28]
gi|410534969|gb|EKQ09599.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
M36]
gi|410544108|gb|EKQ18446.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
UCD174]
gi|410552829|gb|EKQ26843.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lc-10]
Length = 741
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V + K L +L LEK V Q + V +A + + R G + R G F
Sbjct: 421 VGELKAQEQAQLKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGSF------ 474
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNK 710
F G K ++AK+LA+ +FGS + + +S FS ++ +
Sbjct: 475 ------LFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPG--- 525
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E V NP+ + L++++E+A F + ++ GR+ S G
Sbjct: 526 ------YVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRT 579
Query: 769 VSLGDAIVILSCESFSSRSRA 789
VS D I+I++ + S+ + A
Sbjct: 580 VSFKDTIIIMTSNAGSTDAEA 600
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R++++ VIE L + K N V++GE VV G+ KI GDVP L+D
Sbjct: 119 IDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIANGDVPSKLQDRH 178
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEI 288
+ L + S R + EQR++++
Sbjct: 179 VIRLDVVSLVQGTGIRGQFEQRMQQL 204
>gi|21244857|ref|NP_644439.1| chaperone ClpB [Xanthomonas axonopodis pv. citri str. 306]
gi|21110564|gb|AAM38975.1| ClpB [Xanthomonas axonopodis pv. citri str. 306]
Length = 926
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 52/285 (18%)
Query: 76 ALNRLP-ASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRG-------SIENQQQPLLA 127
AL+ LP ST+ L + + + A+ +A R G S+ + LLA
Sbjct: 74 ALDGLPRGSTAVTDLSANVEEAVERGWVYASLGFGEAQVRTGYLVVGMLSVRGLRHALLA 133
Query: 128 VKIELEQLIISILDDPSVSRVMR--EAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ E ++L ++L++ V E G + S + A E P + K +
Sbjct: 134 ISKEFDKLKPAVLNERFAEIVAGSPEDGLLPSDGFSLGQAAAPGETSGAIAPAALGKQEA 193
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
TA A + LDPI R++++ V++ LM +R+ N ++VGE V
Sbjct: 194 LKKFTTDLTAQAREGK-----LDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAV 248
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQR----VEEIK-------- 289
V G +I +GDVP AL+DV+ L + + + E EQR ++E++
Sbjct: 249 VEGFAQRIARGDVPPALKDVQLRALDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIIL 308
Query: 290 ---------------------NLVRSCLGRGIVLNLGDLEWAEFR 313
NL++ L RG + +G +AE++
Sbjct: 309 FVDETHTLIGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYK 353
>gi|300742282|ref|ZP_07072303.1| ATP-dependent chaperone protein ClpB [Rothia dentocariosa M567]
gi|383808514|ref|ZP_09964053.1| ATP-dependent chaperone protein ClpB [Rothia aeria F0474]
gi|300381467|gb|EFJ78029.1| ATP-dependent chaperone protein ClpB [Rothia dentocariosa M567]
gi|383448620|gb|EID51578.1| ATP-dependent chaperone protein ClpB [Rothia aeria F0474]
Length = 865
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 27 ARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTST 86
A+ G+ + P H+ ++ G+ A L++ L A+ + + +LP ++
Sbjct: 20 AQTAGNPSIEPAHILKALMDQREGVA-VAVLKAAG--LDIDAISEAASAEIKKLPKAS-- 74
Query: 87 PMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISIL-DDPSV 145
G Q S + +AA + AQ H Q I E L++ I D
Sbjct: 75 ---GASVQNANFSRSALAAIQSAQTHA---------QKFGDTYISTEMLLLGIASGDSDT 122
Query: 146 SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV 205
+R + G ++ ++ + Q P + ++ E L+ A K
Sbjct: 123 ARALENLGATAKVIEETIPQVRGDRTVDTPDPEGTFQALEKYGTDLTALAREGK------ 176
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
LDP+ R+ ++ V++ L + K N V++GE VV G+ ++ GDVPE+LR
Sbjct: 177 -LDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGK 235
Query: 264 KCLPLSISSF--RHMNRVEVEQR----VEEIK 289
+ L + S R E E+R +EEIK
Sbjct: 236 TLISLDLGSMVAGAKYRGEFEERLKAVLEEIK 267
>gi|423681849|ref|ZP_17656688.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis WX-02]
gi|383438623|gb|EID46398.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis WX-02]
Length = 698
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + + + L L +V QK+ V +A V + R+G R G F
Sbjct: 387 VGKLQHDDQKKMKELEANLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGSF------ 440
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +FG+ + + + +S + A S
Sbjct: 441 ------LFVGPTGVGKTELSKRLAEELFGTKDAIIRLDMSEYMEKHAVSKLIGSPPGYVG 494
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 495 HEEAG---QLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDT 551
Query: 775 IVILSCESFSSRSR 788
++I++ + S R
Sbjct: 552 VIIMTSNAGVSEKR 565
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R+++V VIE L + K N V++GE V G+ KI +GDVP L++ +
Sbjct: 88 IDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAVAEGLALKIAEGDVPNKLKNKE 147
Query: 265 CLPLSISSF 273
L ++S
Sbjct: 148 LYLLDVASL 156
>gi|363890578|ref|ZP_09317905.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM5]
gi|361964954|gb|EHL17954.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM5]
Length = 862
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTMRRKGKFKDHSEVKEE 657
V K E + L SL + L K+V Q + V +AN++L+ RSG KD K
Sbjct: 552 VSKLVETERDKLLSLESILHKRVIGQDEAVTSVANSILRARSG-------LKDPR--KPI 602
Query: 658 TWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRDEQS 717
F G K ++AK L++ +F S +N + I +S + +
Sbjct: 603 GSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVA-----RLIGAPPGY 657
Query: 718 CSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDAI 775
Y E + EAV P+ + L +++E+A + ++ GR+ S G V+ D +
Sbjct: 658 VGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFKDTV 717
Query: 776 VILSC 780
VI++
Sbjct: 718 VIMTS 722
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
LDP+ R +++ I L + K N V++GE VV G+ +I K DVP++L+D
Sbjct: 179 LDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSLKDKT 238
Query: 265 CLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
L + S R E E+R++ I + GR I+
Sbjct: 239 IFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMF 278
>gi|311033365|sp|Q7WSY8.2|CLPB_PROFC RecName: Full=Chaperone protein ClpB
Length = 866
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 45/304 (14%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPL------Q 65
LT + V A+ LA +G+ P+H+ + ML +S PL
Sbjct: 6 LTTMSRDAVTAAVRLALTKGNPTAEPVHLLHAMLMVP---------ESSVAPLLKAVGAD 56
Query: 66 CKALELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQ---Q 122
++ + A+++LP+S+ G P +S AL A A R + +Q
Sbjct: 57 AARVDGAASAAIDKLPSSS-----GSSVAQPQLSGALARVL--ADAETRADKLGDQFVST 109
Query: 123 QPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNK 182
+ LL E++ +IL V+ E F+ ++ + A +S S
Sbjct: 110 EHLLIALAEVDSDAKNILASNGVTTAALEKAFNDSRGDKRITSA-------ESEGGESAL 162
Query: 183 SKESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASI 240
K S + L+Q A K LDP+ R+ ++ V + L + K N V++GE
Sbjct: 163 DKYS--IDLTQRAKDGK-------LDPVIGRDSEIRRVAQVLSRRTKNNPVLIGEAGVGK 213
Query: 241 EGVVRGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGR 298
VV G+ +I KGDVP++L+ + + L ++S R E E+R++ + N ++S G+
Sbjct: 214 TAVVEGLAQRIVKGDVPDSLKGRRLVSLDLASMVAGAKYRGEFEERLKAVLNEIKSAEGQ 273
Query: 299 GIVL 302
I
Sbjct: 274 IITF 277
>gi|417999499|ref|ZP_12639708.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
T71499]
gi|418012522|ref|ZP_12652222.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lpc-37]
gi|410539130|gb|EKQ13668.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
T71499]
gi|410556746|gb|EKQ30621.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus casei
Lpc-37]
Length = 741
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V + K L +L LEK V Q + V +A + + R G + R G F
Sbjct: 421 VGELKAQEQAQLKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGSF------ 474
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNK 710
F G K ++AK+LA+ +FGS + + +S FS ++ +
Sbjct: 475 ------LFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPG--- 525
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E V NP+ + L++++E+A F + ++ GR+ S G
Sbjct: 526 ------YVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRT 579
Query: 769 VSLGDAIVILSCESFSSRSRA 789
VS D I+I++ + S+ + A
Sbjct: 580 VSFKDTIIIMTSNAGSTDAEA 600
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R++++ VIE L + K N V++GE VV G+ KI GDVP L+D
Sbjct: 119 IDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIANGDVPSKLQDRH 178
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEI 288
+ L + S R + EQR++++
Sbjct: 179 VIRLDVVSLVQGTGIRGQFEQRMQQL 204
>gi|260885469|ref|ZP_05735095.2| ATP-dependent chaperone protein ClpB [Prevotella tannerae ATCC
51259]
gi|260852438|gb|EEX72307.1| ATP-dependent chaperone protein ClpB [Prevotella tannerae ATCC
51259]
Length = 895
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 42/301 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A V+QA+ A R G V +H L L+ + Q ++
Sbjct: 35 FTIKAQEAVQQALNKAERGGQQAVGTIH------------LLLGVLEVGENVTQFLFGKM 82
Query: 72 CFN---VALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQ--AHQRRGSIENQQQPLL 126
N VA N + P + G P + AA +A A Q S
Sbjct: 83 GVNLQQVAQNATQEAARLPRVSGGE--PYLDREANAALTKAVDIAKQMGDSF-------- 132
Query: 127 AVKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKE 185
+ LE +++++L PS ++++R+AG + +K + + L ++T SS ++ +
Sbjct: 133 ---VGLEPMLLALLITPSSTAQLLRDAGLTEDGLKKAIGE---LRGGRKATSASSEETYQ 186
Query: 186 SNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGV 243
+ + K LDP+ R+E++ V++ L + K N +++GE +
Sbjct: 187 ALAKFARNLVEEARSGK----LDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAI 242
Query: 244 VRGVIDKIEKGDVPEALRDVKCLPLSISSFRHMNRV--EVEQRVEEIKNLVRSCLGRGIV 301
V G+ ++I +GDVPE LR+ + L + + + E E+R++ + N V GR I+
Sbjct: 243 VEGIAERIVRGDVPENLREKQLFSLDMGALLAGAKYKGEFEERLKSVVNEVVGSDGRIIL 302
Query: 302 L 302
Sbjct: 303 F 303
>gi|385820467|ref|YP_005856854.1| chaperone ATPase [Lactobacillus casei LC2W]
gi|385823654|ref|YP_005859996.1| chaperone ATPase [Lactobacillus casei BD-II]
gi|327382794|gb|AEA54270.1| ATPase with chaperone activity, ATP-binding subunit [Lactobacillus
casei LC2W]
gi|327385981|gb|AEA57455.1| ATPase with chaperone activity, ATP-binding subunit [Lactobacillus
casei BD-II]
Length = 741
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSG---TMRRKGKFKDHSEV 654
V + K L +L LEK V Q + V +A + + R G + R G F
Sbjct: 421 VGELKAQEQAQLKNLAGDLEKHVIGQNEAVDKVARAIRRNRIGFNKSGRPIGSF------ 474
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALS----SFSSTRADSTEDSRNK 710
F G K ++AK+LA+ +FGS + + +S FS ++ +
Sbjct: 475 ------LFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPG--- 525
Query: 711 RSRDEQSCSYIE--RFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDE 768
Y E + E V NP+ + L++++E+A F + ++ GR+ S G
Sbjct: 526 ------YVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRT 579
Query: 769 VSLGDAIVILSCESFSSRSRA 789
VS D I+I++ + S+ + A
Sbjct: 580 VSFKDTIIIMTSNAGSTDAEA 600
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 207 LDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDVK 264
+DP+ R++++ VIE L + K N V++GE VV G+ KI GDVP L+D
Sbjct: 119 IDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIANGDVPSKLQDRH 178
Query: 265 CLPLSISSFRHMN--RVEVEQRVEEI 288
+ L + S R + EQR++++
Sbjct: 179 VIRLDVVSLVQGTGIRGQFEQRMQQL 204
>gi|433446336|ref|ZP_20410395.1| ATP-dependent Clp protease, ATP-binding subunitClpE [Anoxybacillus
flavithermus TNO-09.006]
gi|432000632|gb|ELK21526.1| ATP-dependent Clp protease, ATP-binding subunitClpE [Anoxybacillus
flavithermus TNO-09.006]
Length = 700
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + + L L KKV Q++ V IA + + R+G R G F
Sbjct: 399 VGKLQAEEQTKMKHLEENLAKKVIGQEEAVRKIAKAIRRSRAGLKAKNRPIGSF------ 452
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K +++K LA +FGS + + + +S + A S
Sbjct: 453 ------LFVGPTGVGKTELSKTLAEQLFGSKDAMIRLDMSEYMEKHAVSKLIGAPPGYIG 506
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ + E V NP+ + L++++E+A Q F + +E GR+ S G VS D
Sbjct: 507 HEEAG---QLTEKVRRNPYSIILLDEMEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDT 563
Query: 775 IVILS 779
++I++
Sbjct: 564 VIIMT 568
>gi|311112199|ref|YP_003983421.1| chaperone protein ClpB [Rothia dentocariosa ATCC 17931]
gi|310943693|gb|ADP39987.1| chaperone protein ClpB [Rothia dentocariosa ATCC 17931]
Length = 865
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 27 ARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTST 86
A+ G+ + P H+ ++ G+ A L++ L A+ + + +LP ++
Sbjct: 20 AQTAGNPSIEPAHILKALMDQREGVA-VAVLKAAG--LDIDAISEAASAEIKKLPKAS-- 74
Query: 87 PMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISIL-DDPSV 145
G Q S + +AA + AQ H Q I E L++ I D
Sbjct: 75 ---GASVQNANFSRSALAAIQSAQTHA---------QKFGDTYISTEMLLLGIASGDSDT 122
Query: 146 SRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNVLVLSQTASATKVSKPRV 205
+R + G ++ ++ + Q P + ++ E L+ A K
Sbjct: 123 ARALENLGATAKVIEETIPQVRGDRTVDTPDPEGTFQALEKYGTDLTALAREGK------ 176
Query: 206 SLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRGVIDKIEKGDVPEALRDV 263
LDP+ R+ ++ V++ L + K N V++GE VV G+ ++ GDVPE+LR
Sbjct: 177 -LDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGK 235
Query: 264 KCLPLSISSF--RHMNRVEVEQR----VEEIK 289
+ L + S R E E+R +EEIK
Sbjct: 236 TLISLDLGSMVAGAKYRGEFEERLKAVLEEIK 267
>gi|238921070|ref|YP_002934585.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
gi|238870639|gb|ACR70350.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
ictaluri 93-146]
Length = 857
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 38/288 (13%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + + A +LA R + + P+H+ + ML G +R + S + +
Sbjct: 6 LTNKFQLALADAQSLALGRDNQFIEPIHLMSAMLGQDGGTVRPLLV---SAGVDIGEFQQ 62
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAF----KRAQAHQRRGSIENQQQPLLA 127
A+ RLP T GG Q P SN L+ K AQ H
Sbjct: 63 SLEQAIARLPQVEGT---GGDVQ-P--SNDLIRVLNLCDKLAQKHS-------------D 103
Query: 128 VKIELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKES 186
I E I++ +++ ++ +++ AG S+ ++ VEQ E ++
Sbjct: 104 TYISSELFILAAMEERGKLADMLKAAGASAQKLSVAVEQLRGGEKVDDQNAEDQRQALNK 163
Query: 187 NVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVV 244
+ L++ A K LDP+ R+E++ I+ L + K N V++GE +V
Sbjct: 164 YTIDLTERAELGK-------LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216
Query: 245 RGVIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKN 290
G+ +I G+VPE L+ + L L + + R E E+R++ + N
Sbjct: 217 EGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERLKAVLN 264
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V + E E L + L K+V Q + V ++N + + R+G R G F
Sbjct: 548 VSRMLEGEREKLLRMEGELHKRVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSF------ 601
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + V I +S F + S
Sbjct: 602 ------LFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 656 YEEGGYL---TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712
Query: 775 IVILS 779
+VI++
Sbjct: 713 VVIMT 717
>gi|219125089|ref|XP_002182821.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405615|gb|EEC45557.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 887
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 130/298 (43%), Gaps = 26/298 (8%)
Query: 9 QQGLTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKA 68
++ +T A V++Q++++AR G++Q PLH+A + + C + + +
Sbjct: 3 ERTITDATAKVIEQSLSIARDNGNSQADPLHLAVALFTGDDSMGARVCTKVVADNVDVNV 62
Query: 69 LELCFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAV 128
+ L + P+ T P + S+ + +A + G
Sbjct: 63 VRKNLQRRLLQKPSQTPAP-----HEASLSSSYSSLLQRATKASKANGD----------A 107
Query: 129 KIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
+ L+ LI+++ +D + V+ ++ + + V+ + ++ + ++ E
Sbjct: 108 LVALDHLILALYEDREAADVLTQSMLTKKLAQGAVKDLRGSHKVTSASAEETYEALEKYG 167
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L Q A K LDP+ R+E++ +I+ L + K N V+VGE +V G
Sbjct: 168 IDLVQQAEDGK-------LDPVVGRDEEIRRLIQILSRRTKNNPVLVGEPGTGKTSIVEG 220
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I +GDVPE+++ V L + + R E E+R+ + + V+ G+ ++
Sbjct: 221 LARRIVEGDVPESIKGVALRTLDMGALVAGAKYRGEFEERLRAVLDEVKRAQGKMLLF 278
>gi|189501229|ref|YP_001960699.1| ATPase AAA [Chlorobium phaeobacteroides BS1]
gi|189496670|gb|ACE05218.1| AAA ATPase central domain protein [Chlorobium phaeobacteroides BS1]
Length = 439
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 41/272 (15%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
T +A ++ A TLA R H Q+ P+H+ + ML+ + + +Q L
Sbjct: 8 FTVKAQEALQSAATLAGSRQHQQIEPVHLLHVMLSDRENI---GFQIAQKLEVQVDTLLT 64
Query: 72 CFNVALNRLPASTSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIE 131
++ L+R+ T G + IS + F A + + L I
Sbjct: 65 VLDLELDRIAKVTGASATGQY-----ISQDMGKVFDVAL---------KEAEKLKDEYIS 110
Query: 132 LEQLIISILDDPS-VSRVMREAGF---SSTQVKSNVEQAVSLEICSQSTPVSSNK----S 183
E L I++ ++ VS +MR+AG + +V + + S + SQ+ + N S
Sbjct: 111 SEHLFIAMSEEGGKVSTLMRDAGLERDAILRVMAGIRG--SQRVTSQTAEDTYNSLKKYS 168
Query: 184 KESNVLVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIE 241
+ N LV + LDP+ R+E++ V++ L + K N V++GE
Sbjct: 169 RNLNDLV------------RKGKLDPVIGRDEEIRRVLQILSRRTKNNPVLIGEPGVGKT 216
Query: 242 GVVRGVIDKIEKGDVPEALRDVKCLPLSISSF 273
+ G+ +I GDVPE+LR + L I+S
Sbjct: 217 AIAEGIAQRIVAGDVPESLRSKQIAALDIASL 248
>gi|339326277|ref|YP_004685970.1| chaperone protein ClpB [Cupriavidus necator N-1]
gi|338166434|gb|AEI77489.1| chaperone protein ClpB [Cupriavidus necator N-1]
Length = 862
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 35/298 (11%)
Query: 12 LTAEAASVVKQAMTLARRRGHAQVTPLHVANTMLAASTGLLRTACLQSHSHPLQCKALEL 71
LT + A +LA + + P H+ +LA G + ++ + + L+
Sbjct: 6 LTTRFQEALADAQSLALGNDNQYIEPQHLLRALLAQDDGAAKALLARAG---VNVQGLQS 62
Query: 72 CFNVALNRLPA--STSTPMLGGHCQFPTISNALVAAFKRAQAHQRRGSIENQQQPLLAVK 129
+ A+ RLP TS +G + N L AA K A I+ Q + +
Sbjct: 63 ALDAAIKRLPQVQGTSEVQIG-----RDLVNLLNAAEKEA--------IKRGDQFIAS-- 107
Query: 130 IELEQLIISILDDPS-VSRVMREAGFSSTQVKSNVEQAVSLEICSQSTPVSSNKSKESNV 188
E ++++ DD R+ RE G + ++S ++ + + + ++ +
Sbjct: 108 ---ELFLLAVADDKGDAGRIARENGLNRKSLESAIQAVRGGDSVNSAEAEGQREALKKYT 164
Query: 189 LVLSQTASATKVSKPRVSLDPI--RNEDVMYVIENLMSKRKRNFVVVGECLASIEGVVRG 246
+ L++ A K LDP+ R++++ I+ L + K N V++GE +V G
Sbjct: 165 IDLTERARIGK-------LDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEG 217
Query: 247 VIDKIEKGDVPEALRDVKCLPLSISSF--RHMNRVEVEQRVEEIKNLVRSCLGRGIVL 302
+ +I G+VPE+L++ + L L ++ R E E+R++ + N V G+ IV
Sbjct: 218 LAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERLKAVLNDVAKDEGQTIVF 275
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 598 VHKFKELNSENLTSLCNALEKKVPWQKDTVYDIANTVLKCRSGTM---RRKGKFKDHSEV 654
V K + E L + + L +V Q + V +++ + + R+G R G F
Sbjct: 551 VSKMMQGEREKLLKMEDRLHARVVGQDEAVRLVSDAIRRSRAGLADENRPYGSF------ 604
Query: 655 KEETWLFFQGVDADAKEKIAKELARLVFGSHNNFVSIALSSFSSTRADSTEDSRNKRSRD 714
F G K ++ K LA +F S + + I +S F + S
Sbjct: 605 ------LFLGPTGVGKTELCKALAEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVG 658
Query: 715 EQSCSYIERFAEAVSNNPHRVFLIEDVEQADYCSQKGFKRAIESGRIVTSSGDEVSLGDA 774
+ Y+ EAV P+ V L+++VE+A + ++ GR+ G V +
Sbjct: 659 YEEGGYL---TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNT 715
Query: 775 IVILSC 780
+++++
Sbjct: 716 VIVMTS 721
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,319,463,983
Number of Sequences: 23463169
Number of extensions: 487917305
Number of successful extensions: 1517534
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3384
Number of HSP's successfully gapped in prelim test: 6563
Number of HSP's that attempted gapping in prelim test: 1495180
Number of HSP's gapped (non-prelim): 22782
length of query: 854
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 702
effective length of database: 8,792,793,679
effective search space: 6172541162658
effective search space used: 6172541162658
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)