Query 003039
Match_columns 854
No_of_seqs 757 out of 4732
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:05:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 4.1E-51 1.4E-55 447.8 18.2 257 529-805 44-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-51 5.5E-56 445.0 14.1 256 529-804 16-288 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 5.9E-52 2E-56 450.3 10.4 256 528-803 28-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.1E-49 3.9E-54 430.9 21.7 254 529-803 39-298 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 1E-48 3.4E-53 427.6 19.8 250 529-805 61-316 (336)
6 3hmm_A TGF-beta receptor type- 100.0 3.2E-48 1.1E-52 421.4 21.7 266 529-805 6-297 (303)
7 4fih_A Serine/threonine-protei 100.0 7E-49 2.4E-53 430.1 15.9 247 529-799 77-324 (346)
8 4ase_A Vascular endothelial gr 100.0 4.1E-49 1.4E-53 435.6 12.8 265 523-806 61-348 (353)
9 3fpq_A Serine/threonine-protei 100.0 7.6E-48 2.6E-52 413.6 21.9 247 529-799 29-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 9.5E-49 3.2E-53 429.7 12.3 249 528-799 26-277 (350)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-48 6.1E-53 420.7 11.9 247 528-799 34-285 (311)
12 4fie_A Serine/threonine-protei 100.0 2.6E-47 8.9E-52 427.8 21.6 248 528-799 153-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.5E-47 5.3E-52 407.7 15.3 245 527-799 14-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-47 4.5E-52 413.8 11.0 246 528-799 26-282 (304)
15 4g31_A Eukaryotic translation 100.0 2E-45 6.9E-50 397.8 19.0 249 528-799 7-280 (299)
16 2qkw_B Protein kinase; three-h 100.0 2.9E-43 9.9E-48 385.8 25.1 273 529-805 42-315 (321)
17 3uim_A Brassinosteroid insensi 100.0 1.2E-43 4.2E-48 389.4 18.9 288 516-803 18-309 (326)
18 4b99_A Mitogen-activated prote 100.0 3.3E-43 1.1E-47 394.9 20.9 259 528-799 56-345 (398)
19 3uto_A Twitchin; kinase, muscl 100.0 1.3E-42 4.5E-47 408.6 17.6 250 528-799 159-411 (573)
20 4f9c_A Cell division cycle 7-r 100.0 2.6E-42 8.9E-47 383.4 18.8 194 528-733 23-250 (361)
21 3v5w_A G-protein coupled recep 100.0 1E-41 3.5E-46 398.8 18.5 246 529-799 192-450 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 7.9E-41 2.7E-45 364.5 19.2 255 529-806 13-283 (310)
23 3p86_A Serine/threonine-protei 100.0 2.2E-40 7.5E-45 361.3 19.3 258 527-806 38-299 (309)
24 2nru_A Interleukin-1 receptor- 100.0 2.1E-39 7.1E-44 352.4 25.8 281 515-804 12-305 (307)
25 2psq_A Fibroblast growth facto 100.0 1.4E-40 4.8E-45 372.2 16.6 260 528-807 83-366 (370)
26 3fxz_A Serine/threonine-protei 100.0 6E-40 2.1E-44 355.7 21.0 248 528-799 22-270 (297)
27 3kul_A Ephrin type-A receptor 100.0 3.7E-41 1.3E-45 370.1 11.4 258 525-805 48-313 (325)
28 4hcu_A Tyrosine-protein kinase 100.0 1.3E-40 4.3E-45 355.1 14.0 254 528-805 12-266 (269)
29 2c30_A Serine/threonine-protei 100.0 3E-39 1E-43 354.3 24.7 260 516-799 23-295 (321)
30 3zgw_A Maternal embryonic leuc 100.0 1.8E-40 6.2E-45 367.5 15.1 247 528-799 12-261 (347)
31 2qol_A Ephrin receptor; recept 100.0 7.5E-41 2.6E-45 374.7 12.0 257 527-806 46-310 (373)
32 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.1E-40 7.2E-45 353.0 14.8 255 528-806 10-265 (268)
33 3gen_A Tyrosine-protein kinase 100.0 2.5E-40 8.5E-45 355.4 14.3 256 527-806 25-281 (283)
34 3soc_A Activin receptor type-2 100.0 3.8E-40 1.3E-44 361.5 15.3 266 528-805 26-318 (322)
35 3cbl_A C-FES, proto-oncogene t 100.0 2.2E-40 7.4E-45 371.7 13.1 255 528-805 116-374 (377)
36 3fe3_A MAP/microtubule affinit 100.0 4.9E-40 1.7E-44 361.5 15.0 245 528-799 17-265 (328)
37 3ugc_A Tyrosine-protein kinase 100.0 1.5E-40 5E-45 359.6 10.4 264 527-805 11-291 (295)
38 4euu_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 349.1 25.2 271 528-804 11-308 (319)
39 4eqm_A Protein kinase; transfe 100.0 8E-40 2.7E-44 354.1 14.7 258 528-805 13-275 (294)
40 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-39 3.6E-44 355.6 14.9 258 528-805 25-311 (314)
41 2yab_A Death-associated protei 100.0 2.1E-39 7E-44 361.1 17.3 249 528-799 14-273 (361)
42 3vhe_A Vascular endothelial gr 100.0 4.1E-40 1.4E-44 366.2 11.5 262 526-806 22-356 (359)
43 2y0a_A Death-associated protei 100.0 3.2E-39 1.1E-43 354.9 18.3 251 526-799 11-272 (326)
44 3q4u_A Activin receptor type-1 100.0 4.7E-39 1.6E-43 348.3 19.3 257 528-803 10-300 (301)
45 1o6l_A RAC-beta serine/threoni 100.0 2.9E-39 1E-43 356.5 17.9 245 529-799 8-261 (337)
46 1qcf_A Haematopoetic cell kina 100.0 7.2E-40 2.5E-44 376.6 13.4 253 528-804 190-443 (454)
47 3tt0_A Basic fibroblast growth 100.0 1.4E-39 4.8E-44 365.7 15.3 260 527-806 70-353 (382)
48 1mp8_A Focal adhesion kinase 1 100.0 1.5E-39 5E-44 349.3 14.6 257 527-807 16-278 (281)
49 3c0i_A Peripheral plasma membr 100.0 8E-39 2.7E-43 355.4 20.5 256 525-799 23-287 (351)
50 3niz_A Rhodanese family protei 100.0 3.4E-39 1.2E-43 352.2 17.0 260 528-799 23-301 (311)
51 1opk_A P150, C-ABL, proto-onco 100.0 1.3E-39 4.4E-44 378.3 14.1 254 528-804 222-477 (495)
52 3l9p_A Anaplastic lymphoma kin 100.0 8.2E-40 2.8E-44 365.6 11.7 260 527-806 72-346 (367)
53 3lxl_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 358.4 11.6 266 527-807 24-305 (327)
54 3kfa_A Tyrosine-protein kinase 100.0 1.8E-39 6E-44 349.5 13.0 258 527-807 14-273 (288)
55 3poz_A Epidermal growth factor 100.0 2E-39 7E-44 356.4 13.7 255 528-806 17-279 (327)
56 1rjb_A FL cytokine receptor; k 100.0 5E-39 1.7E-43 355.4 16.4 265 526-809 45-338 (344)
57 1ob3_A PFPK5, cell division co 100.0 5.2E-39 1.8E-43 346.4 16.1 262 529-799 5-281 (288)
58 1tki_A Titin; serine kinase, m 100.0 4.3E-39 1.5E-43 353.0 15.7 249 528-799 7-258 (321)
59 3dtc_A Mitogen-activated prote 100.0 2.6E-39 8.9E-44 345.0 13.6 251 528-803 9-271 (271)
60 3t9t_A Tyrosine-protein kinase 100.0 2.2E-39 7.4E-44 344.6 12.8 254 528-805 10-264 (267)
61 1k9a_A Carboxyl-terminal SRC k 100.0 9.3E-39 3.2E-43 366.8 19.0 248 529-805 196-445 (450)
62 1qpc_A LCK kinase; alpha beta 100.0 4.6E-39 1.6E-43 344.7 15.0 255 528-806 15-270 (279)
63 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.4E-39 8.1E-44 372.0 13.7 253 528-804 186-439 (452)
64 1luf_A Muscle-specific tyrosin 100.0 1.6E-39 5.5E-44 358.9 11.8 259 528-806 49-336 (343)
65 2zv2_A Calcium/calmodulin-depe 100.0 1.8E-38 6.1E-43 343.8 19.7 247 528-799 15-293 (298)
66 2izr_A Casein kinase I isoform 100.0 7.3E-39 2.5E-43 352.3 16.9 258 529-806 12-282 (330)
67 3lxp_A Non-receptor tyrosine-p 100.0 4E-39 1.4E-43 352.6 14.7 263 529-808 34-313 (318)
68 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.2E-39 7.6E-44 359.8 12.8 246 528-799 25-281 (353)
69 3tki_A Serine/threonine-protei 100.0 2.9E-39 1E-43 354.6 13.5 250 528-799 9-262 (323)
70 1kob_A Twitchin; kinase, intra 100.0 1.2E-38 4E-43 358.3 18.6 250 528-799 53-305 (387)
71 3qup_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 353.6 13.8 260 527-806 24-299 (323)
72 2x4f_A Myosin light chain kina 100.0 1.1E-38 3.8E-43 357.1 18.3 247 531-799 94-343 (373)
73 1t46_A HOMO sapiens V-KIT hard 100.0 3.7E-39 1.3E-43 351.1 14.0 260 527-805 24-307 (313)
74 3soa_A Calcium/calmodulin-depe 100.0 1.2E-38 4.1E-43 364.4 18.9 252 526-799 11-268 (444)
75 3qd2_B Eukaryotic translation 100.0 8.3E-39 2.8E-43 350.9 16.6 250 527-799 7-326 (332)
76 2bdw_A Hypothetical protein K1 100.0 1.1E-38 3.6E-43 355.8 17.7 251 526-799 29-285 (362)
77 3kex_A Receptor tyrosine-prote 100.0 4.4E-39 1.5E-43 353.4 14.0 254 529-806 16-277 (325)
78 1csn_A Casein kinase-1; phosph 100.0 1.9E-38 6.5E-43 343.0 18.6 259 528-805 12-283 (298)
79 3cc6_A Protein tyrosine kinase 100.0 6.9E-39 2.4E-43 343.9 15.0 260 528-811 14-279 (281)
80 4aw2_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 366.0 14.9 252 529-799 77-339 (437)
81 4dc2_A Protein kinase C IOTA t 100.0 2.2E-38 7.4E-43 356.5 19.3 254 528-799 54-319 (396)
82 4fvq_A Tyrosine-protein kinase 100.0 5.5E-39 1.9E-43 345.8 13.8 250 528-807 10-277 (289)
83 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-38 3.8E-43 348.1 16.3 250 521-799 52-305 (311)
84 4e5w_A Tyrosine-protein kinase 100.0 1.6E-39 5.5E-44 352.3 9.6 263 527-804 22-301 (302)
85 2pmi_A Negative RE, cyclin-dep 100.0 1.6E-38 5.4E-43 347.8 17.5 264 527-799 6-294 (317)
86 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-38 4.7E-43 349.6 16.9 250 532-799 17-271 (325)
87 3v8s_A RHO-associated protein 100.0 3.4E-39 1.2E-43 364.9 12.3 248 530-799 73-330 (410)
88 3o0g_A Cell division protein k 100.0 1.8E-38 6E-43 342.9 17.4 260 529-799 5-283 (292)
89 3lb7_A RAF proto-oncogene seri 100.0 1.6E-38 5.5E-43 346.2 17.2 260 524-804 34-299 (307)
90 3hko_A Calcium/calmodulin-depe 100.0 1.7E-38 5.9E-43 351.1 17.7 257 526-799 26-331 (345)
91 3op5_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 354.7 17.5 266 527-806 36-330 (364)
92 2i1m_A Macrophage colony-stimu 100.0 1.4E-38 4.7E-43 350.2 16.7 264 527-809 47-330 (333)
93 1u59_A Tyrosine-protein kinase 100.0 2.2E-38 7.4E-43 341.3 17.9 253 532-808 16-275 (287)
94 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-38 4E-43 349.0 15.8 242 529-799 9-259 (318)
95 2wqm_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 342.4 20.4 262 528-807 34-299 (310)
96 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-38 3.9E-43 351.6 15.7 244 528-799 11-259 (336)
97 4f0f_A Serine/threonine-protei 100.0 2.9E-38 1E-42 339.9 18.1 250 528-803 21-287 (287)
98 2pvf_A Fibroblast growth facto 100.0 8.4E-39 2.9E-43 352.5 14.0 263 526-808 35-321 (334)
99 3kmu_A ILK, integrin-linked ki 100.0 2.6E-38 8.9E-43 336.6 17.3 249 528-804 12-269 (271)
100 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-38 2.6E-42 340.8 21.3 252 529-805 11-263 (307)
101 4eut_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 354.5 20.6 272 528-805 11-309 (396)
102 1xjd_A Protein kinase C, theta 100.0 5.6E-39 1.9E-43 355.4 11.6 246 528-799 19-270 (345)
103 3a62_A Ribosomal protein S6 ki 100.0 1.9E-38 6.6E-43 348.7 15.7 246 528-799 19-277 (327)
104 3mdy_A Bone morphogenetic prot 100.0 1.8E-37 6.3E-42 341.4 23.4 268 522-805 33-331 (337)
105 3a8x_A Protein kinase C IOTA t 100.0 4.6E-38 1.6E-42 348.3 18.6 253 529-799 12-276 (345)
106 1rdq_E PKA C-alpha, CAMP-depen 100.0 2E-38 6.9E-43 351.8 15.8 242 529-799 44-294 (350)
107 3uc3_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 351.7 17.6 250 528-799 22-275 (361)
108 2xir_A Vascular endothelial gr 100.0 2.2E-38 7.4E-43 345.5 15.6 262 527-807 28-312 (316)
109 3dbq_A Dual specificity protei 100.0 2.7E-38 9.3E-43 349.9 16.5 248 528-799 11-274 (343)
110 3is5_A Calcium-dependent prote 100.0 1E-37 3.5E-42 335.9 20.6 252 527-799 23-279 (285)
111 1mqb_A Ephrin type-A receptor 100.0 2.4E-38 8.1E-43 348.9 15.8 255 529-806 47-310 (333)
112 3f3z_A Calcium/calmodulin-depe 100.0 3.9E-38 1.3E-42 337.2 17.1 250 526-799 9-262 (277)
113 2buj_A Serine/threonine-protei 100.0 1.5E-38 5.3E-43 347.2 14.2 260 527-804 30-305 (317)
114 2a2a_A Death-associated protei 100.0 4.4E-38 1.5E-42 344.7 17.7 251 526-799 12-273 (321)
115 1b6c_B TGF-B superfamily recep 100.0 1.9E-37 6.4E-42 342.2 22.8 269 518-805 34-336 (342)
116 2h34_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 339.3 20.9 258 528-807 36-298 (309)
117 4fr4_A YANK1, serine/threonine 100.0 4.2E-38 1.5E-42 352.9 17.6 248 528-799 17-272 (384)
118 2i0e_A Protein kinase C-beta I 100.0 2.2E-38 7.7E-43 351.6 15.1 246 528-799 22-277 (353)
119 2h8h_A Proto-oncogene tyrosine 100.0 6.9E-39 2.4E-43 375.6 11.1 253 528-804 269-522 (535)
120 2vd5_A DMPK protein; serine/th 100.0 2.7E-38 9.3E-43 357.8 15.6 251 529-799 64-328 (412)
121 1xbb_A Tyrosine-protein kinase 100.0 5.7E-38 1.9E-42 338.7 17.4 258 529-811 19-285 (291)
122 4ejn_A RAC-alpha serine/threon 100.0 1.5E-38 5.3E-43 364.7 13.7 246 528-799 150-405 (446)
123 3lzb_A Epidermal growth factor 100.0 1.7E-38 5.8E-43 349.2 13.3 255 528-806 17-279 (327)
124 3g33_A Cell division protein k 100.0 2.6E-38 9E-43 344.2 14.5 268 523-799 6-297 (308)
125 3og7_A AKAP9-BRAF fusion prote 100.0 2.7E-38 9.1E-43 341.0 14.4 261 523-804 21-287 (289)
126 3ll6_A Cyclin G-associated kin 100.0 1.2E-38 4.1E-43 350.5 11.8 254 527-805 29-308 (337)
127 2w4o_A Calcium/calmodulin-depe 100.0 6.5E-38 2.2E-42 347.7 17.8 248 528-799 55-306 (349)
128 2ozo_A Tyrosine-protein kinase 100.0 5.3E-38 1.8E-42 373.6 17.7 250 533-806 343-599 (613)
129 3gni_B Strad alpha; kinase fol 100.0 6.6E-38 2.3E-42 352.9 17.6 271 528-803 27-340 (389)
130 4hgt_A Casein kinase I isoform 100.0 1.2E-37 4.1E-42 336.2 18.9 261 527-806 10-281 (296)
131 4agu_A Cyclin-dependent kinase 100.0 5.8E-38 2E-42 341.7 16.1 263 529-799 6-285 (311)
132 2zmd_A Dual specificity protei 100.0 2.4E-38 8.3E-43 356.6 13.6 248 528-799 58-321 (390)
133 3c1x_A Hepatocyte growth facto 100.0 4E-38 1.4E-42 352.5 15.0 254 529-805 92-355 (373)
134 3f66_A Hepatocyte growth facto 100.0 6.1E-38 2.1E-42 339.4 16.0 254 529-805 28-291 (298)
135 3ork_A Serine/threonine protei 100.0 1.4E-38 4.7E-43 347.2 10.8 255 528-803 14-279 (311)
136 3uzp_A CKI-delta, CKID, casein 100.0 1.9E-37 6.6E-42 334.8 19.7 260 528-806 11-281 (296)
137 3gxj_A TGF-beta receptor type- 100.0 2.5E-39 8.6E-44 350.5 4.9 258 528-805 5-297 (303)
138 3g2f_A Bone morphogenetic prot 100.0 6.9E-38 2.4E-42 344.9 16.5 268 528-806 15-319 (336)
139 2a19_B Interferon-induced, dou 100.0 1.3E-37 4.6E-42 333.7 18.0 251 523-806 8-275 (284)
140 1fvr_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42 345.6 14.4 256 528-805 27-300 (327)
141 2eue_A Carbon catabolite derep 100.0 4.3E-38 1.5E-42 336.6 14.0 244 528-799 15-263 (275)
142 4fl3_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 375.5 15.4 249 532-805 375-631 (635)
143 1vzo_A Ribosomal protein S6 ki 100.0 2.7E-38 9.2E-43 351.7 12.8 252 528-800 56-323 (355)
144 3kk8_A Calcium/calmodulin depe 100.0 1.2E-37 4E-42 334.5 17.4 249 528-799 8-262 (284)
145 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.9E-37 1E-41 344.5 21.1 251 528-806 67-340 (365)
146 3fdn_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 336.2 14.8 244 528-799 11-258 (279)
147 3pls_A Macrophage-stimulating 100.0 1E-37 3.5E-42 337.3 16.6 254 531-806 26-288 (298)
148 2jam_A Calcium/calmodulin-depe 100.0 1.1E-37 3.7E-42 338.7 16.7 250 526-799 9-262 (304)
149 2ac3_A MAP kinase-interacting 100.0 4E-37 1.4E-41 335.8 21.3 256 531-799 18-296 (316)
150 3lm5_A Serine/threonine-protei 100.0 8.8E-38 3E-42 343.4 16.1 261 518-799 20-288 (327)
151 3bhy_A Death-associated protei 100.0 1E-37 3.5E-42 334.9 16.1 251 526-799 5-266 (283)
152 2y94_A 5'-AMP-activated protei 100.0 6.3E-38 2.2E-42 360.9 15.5 245 528-799 18-267 (476)
153 1nxk_A MAP kinase-activated pr 100.0 3.8E-37 1.3E-41 347.9 21.5 246 532-799 68-322 (400)
154 2r5t_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 351.6 13.8 242 528-795 40-286 (373)
155 1p4o_A Insulin-like growth fac 100.0 2.3E-38 7.9E-43 346.6 11.0 260 527-806 26-300 (322)
156 1x8b_A WEE1HU, WEE1-like prote 100.0 8.6E-38 2.9E-42 335.4 15.1 246 526-799 11-280 (289)
157 2w1i_A JAK2; chromosomal rearr 100.0 2.1E-38 7.1E-43 348.1 10.5 263 528-805 43-322 (326)
158 3brb_A Proto-oncogene tyrosine 100.0 5.8E-38 2E-42 342.1 14.0 260 527-806 35-309 (313)
159 3cok_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 333.0 16.7 247 528-799 13-263 (278)
160 1byg_A CSK, protein (C-termina 100.0 5.9E-38 2E-42 336.1 13.7 249 528-805 23-273 (278)
161 2v62_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 344.3 17.1 262 527-803 38-326 (345)
162 3dls_A PAS domain-containing s 100.0 9.5E-38 3.3E-42 344.4 15.5 241 526-799 24-275 (335)
163 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-37 4E-42 344.6 16.1 251 526-799 22-278 (342)
164 1u5q_A Serine/threonine protei 100.0 6.3E-38 2.2E-42 347.7 14.0 244 528-799 56-306 (348)
165 2w5a_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 340.0 9.2 254 528-802 8-271 (279)
166 2acx_A G protein-coupled recep 100.0 1.3E-37 4.4E-42 363.5 17.1 250 529-799 187-445 (576)
167 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-37 8E-42 360.4 19.0 251 531-799 190-449 (543)
168 2yex_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 332.0 16.1 251 527-799 8-262 (276)
169 3oz6_A Mitogen-activated prote 100.0 2.2E-37 7.7E-42 348.4 17.9 260 527-799 10-329 (388)
170 3llt_A Serine/threonine kinase 100.0 3.7E-37 1.3E-41 342.7 19.2 199 525-734 34-263 (360)
171 4aaa_A Cyclin-dependent kinase 100.0 6.8E-38 2.3E-42 344.8 12.5 264 528-799 27-307 (331)
172 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.5E-38 2.2E-42 344.8 12.3 261 527-799 35-319 (329)
173 2rku_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 332.0 18.6 246 528-799 17-266 (294)
174 1t4h_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 327.5 22.4 245 529-799 29-283 (290)
175 2jii_A Serine/threonine-protei 100.0 2.6E-37 9E-42 343.1 16.9 261 527-806 43-337 (352)
176 3ttj_A Mitogen-activated prote 100.0 2.6E-37 8.9E-42 355.8 17.1 260 528-799 64-356 (464)
177 3eb0_A Putative uncharacterize 100.0 9.3E-38 3.2E-42 351.0 12.9 266 528-803 9-328 (383)
178 3byv_A Rhoptry kinase; malaria 100.0 4E-38 1.4E-42 353.2 9.6 240 529-799 76-360 (377)
179 2owb_A Serine/threonine-protei 100.0 4.8E-37 1.7E-41 338.7 18.0 246 528-799 43-292 (335)
180 2clq_A Mitogen-activated prote 100.0 3.1E-37 1.1E-41 332.9 15.8 248 532-799 28-279 (295)
181 2yfx_A Tyrosine-protein kinase 100.0 1.2E-37 4E-42 342.2 12.6 261 526-806 30-305 (327)
182 1ua2_A CAK, cell division prot 100.0 2.5E-37 8.5E-42 342.6 15.2 264 527-799 11-292 (346)
183 3i6u_A CDS1, serine/threonine- 100.0 5.1E-37 1.7E-41 349.1 18.0 251 526-799 135-400 (419)
184 2vgo_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 329.6 16.9 244 528-799 16-263 (284)
185 3mtl_A Cell division protein k 100.0 5.9E-38 2E-42 344.4 9.4 259 529-799 5-282 (324)
186 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-37 9.5E-42 335.2 14.5 247 528-800 24-272 (303)
187 3lij_A Calcium/calmodulin depe 100.0 7.3E-37 2.5E-41 355.4 18.8 250 526-799 37-292 (494)
188 2vwi_A Serine/threonine-protei 100.0 2.4E-37 8.3E-42 334.9 13.6 261 528-799 17-288 (303)
189 3eqc_A Dual specificity mitoge 100.0 2.4E-37 8.3E-42 344.3 13.9 254 528-799 35-325 (360)
190 3mwu_A Calmodulin-domain prote 100.0 7E-37 2.4E-41 354.8 18.2 250 526-799 22-277 (486)
191 1u46_A ACK-1, activated CDC42 100.0 1.7E-37 5.7E-42 334.4 11.9 255 528-805 20-284 (291)
192 2h6d_A 5'-AMP-activated protei 100.0 4.2E-37 1.4E-41 328.8 14.8 245 528-799 13-262 (276)
193 3nyv_A Calmodulin-domain prote 100.0 4.7E-37 1.6E-41 356.1 16.2 251 525-799 25-282 (484)
194 1j1b_A Glycogen synthase kinas 100.0 2.8E-37 9.4E-42 351.4 13.8 259 528-799 56-337 (420)
195 3com_A Serine/threonine-protei 100.0 2.5E-36 8.5E-41 329.3 20.6 250 526-799 29-279 (314)
196 2j7t_A Serine/threonine-protei 100.0 6.6E-37 2.3E-41 331.7 15.6 250 528-799 21-276 (302)
197 1cm8_A Phosphorylated MAP kina 100.0 9.2E-37 3.2E-41 340.8 17.2 256 528-799 27-308 (367)
198 3n9x_A Phosphotransferase; mal 100.0 2.2E-36 7.4E-41 345.3 20.5 196 528-731 28-253 (432)
199 2y7j_A Phosphorylase B kinase 100.0 2.4E-36 8.2E-41 337.3 20.4 250 527-799 95-360 (365)
200 4e7w_A Glycogen synthase kinas 100.0 4.4E-37 1.5E-41 346.8 14.5 262 528-799 42-322 (394)
201 3rp9_A Mitogen-activated prote 100.0 3.8E-37 1.3E-41 354.4 14.2 192 527-726 54-280 (458)
202 3mi9_A Cell division protein k 100.0 7.1E-37 2.4E-41 339.4 15.8 265 527-799 18-312 (351)
203 3q60_A ROP5B; pseudokinase, tr 100.0 5.2E-37 1.8E-41 343.3 14.7 251 529-799 65-353 (371)
204 3sv0_A Casein kinase I-like; t 100.0 1.8E-36 6.2E-41 349.3 19.5 260 528-806 9-279 (483)
205 3fme_A Dual specificity mitoge 100.0 2.3E-37 7.8E-42 333.1 11.2 252 528-799 9-267 (290)
206 3nsz_A CK II alpha, casein kin 100.0 1.4E-36 5E-41 333.5 17.4 256 527-799 37-320 (330)
207 2ycf_A Serine/threonine-protei 100.0 1E-36 3.4E-41 334.0 15.5 252 525-799 9-275 (322)
208 3pfq_A PKC-B, PKC-beta, protei 100.0 7.1E-37 2.4E-41 367.3 15.5 246 528-799 343-598 (674)
209 2r3i_A Cell division protein k 100.0 1.1E-36 3.6E-41 329.6 15.2 258 529-799 6-284 (299)
210 2xrw_A Mitogen-activated prote 100.0 2.2E-36 7.7E-41 338.2 18.3 260 528-799 27-319 (371)
211 1phk_A Phosphorylase kinase; g 100.0 1.6E-36 5.4E-41 328.1 16.5 249 528-799 19-284 (298)
212 1wak_A Serine/threonine-protei 100.0 7.1E-37 2.4E-41 344.4 14.1 272 518-799 29-392 (397)
213 3q5i_A Protein kinase; CDPK, m 100.0 1.5E-36 5E-41 353.8 17.0 249 527-799 37-302 (504)
214 2j0j_A Focal adhesion kinase 1 100.0 6.1E-37 2.1E-41 366.8 13.9 258 526-807 390-653 (656)
215 3an0_A Dual specificity mitoge 100.0 4.1E-37 1.4E-41 339.6 11.4 251 529-799 54-311 (340)
216 3pg1_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 343.2 10.7 259 528-799 24-317 (362)
217 3qyz_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 335.9 18.6 259 528-799 29-314 (364)
218 2pml_X PFPK7, Ser/Thr protein 100.0 1.7E-36 5.9E-41 335.4 15.8 258 528-799 33-323 (348)
219 3kvw_A DYRK2, dual specificity 100.0 2.2E-36 7.4E-41 344.9 17.0 196 528-734 99-303 (429)
220 2wtk_C Serine/threonine-protei 100.0 2.1E-36 7.3E-41 328.2 15.6 248 528-799 7-264 (305)
221 3rgf_A Cyclin-dependent kinase 100.0 3.6E-36 1.2E-40 340.6 18.1 263 531-799 26-334 (405)
222 1zy4_A Serine/threonine-protei 100.0 6.6E-36 2.2E-40 323.2 19.1 250 527-799 7-284 (303)
223 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-36 5.9E-41 331.1 14.6 254 528-806 35-303 (319)
224 2x7f_A TRAF2 and NCK-interacti 100.0 6.4E-36 2.2E-40 327.8 19.1 249 528-799 26-287 (326)
225 3e3p_A Protein kinase, putativ 100.0 1.3E-36 4.3E-41 338.2 13.3 266 527-799 24-315 (360)
226 2fst_X Mitogen-activated prote 100.0 1.8E-36 6.2E-41 338.4 14.3 254 528-799 31-312 (367)
227 2i6l_A Mitogen-activated prote 100.0 4.4E-36 1.5E-40 327.4 16.2 262 528-799 13-306 (320)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 1E-36 3.5E-41 337.9 11.0 259 528-799 13-306 (353)
229 3cek_A Dual specificity protei 100.0 1.7E-36 5.7E-41 330.8 12.4 249 528-800 30-294 (313)
230 1blx_A Cyclin-dependent kinase 100.0 2.6E-36 8.9E-41 330.8 13.6 264 528-799 13-297 (326)
231 4exu_A Mitogen-activated prote 100.0 7.4E-36 2.5E-40 334.0 17.2 258 528-799 44-324 (371)
232 2wei_A Calmodulin-domain prote 100.0 8.9E-36 3E-40 320.8 16.9 252 524-799 20-277 (287)
233 1z57_A Dual specificity protei 100.0 1.2E-35 4.2E-40 326.4 17.8 262 527-799 15-329 (339)
234 2rio_A Serine/threonine-protei 100.0 1.2E-35 4.1E-40 339.3 18.1 249 531-799 20-296 (434)
235 2vx3_A Dual specificity tyrosi 100.0 3.1E-35 1.1E-39 330.3 20.5 199 527-734 55-262 (382)
236 3aln_A Dual specificity mitoge 100.0 1.1E-35 3.6E-40 326.4 14.7 253 530-799 26-286 (327)
237 3coi_A Mitogen-activated prote 100.0 2E-35 6.7E-40 328.1 16.7 255 528-799 26-306 (353)
238 3fhr_A MAP kinase-activated pr 100.0 2.6E-35 8.9E-40 325.1 16.8 247 531-799 34-288 (336)
239 2iwi_A Serine/threonine-protei 100.0 4.8E-36 1.7E-40 326.8 10.4 244 522-799 27-284 (312)
240 2eu9_A Dual specificity protei 100.0 2.1E-35 7.2E-40 326.9 15.7 259 526-799 19-334 (355)
241 1q8y_A SR protein kinase; tran 100.0 2.2E-35 7.6E-40 329.6 15.4 263 527-799 20-334 (373)
242 3a99_A Proto-oncogene serine/t 100.0 5.5E-36 1.9E-40 328.0 9.1 244 527-804 44-301 (320)
243 3p23_A Serine/threonine-protei 100.0 1.6E-34 5.4E-39 329.5 20.1 246 529-799 27-284 (432)
244 2dyl_A Dual specificity mitoge 100.0 1.2E-34 4E-39 316.3 17.1 248 529-799 28-284 (318)
245 2pzi_A Probable serine/threoni 100.0 3.2E-34 1.1E-38 346.0 20.6 240 527-806 81-329 (681)
246 3qa8_A MGC80376 protein; kinas 100.0 6E-35 2E-39 344.4 12.9 267 526-804 14-308 (676)
247 3dzo_A Rhoptry kinase domain; 100.0 4.1E-34 1.4E-38 324.5 17.5 239 530-799 82-364 (413)
248 3uqc_A Probable conserved tran 100.0 4.4E-34 1.5E-38 307.9 16.1 232 526-806 31-266 (286)
249 2vuw_A Serine/threonine-protei 100.0 5.6E-34 1.9E-38 314.1 10.2 245 524-799 18-332 (336)
250 3m2w_A MAP kinase-activated pr 100.0 1E-32 3.5E-37 298.9 19.5 222 531-799 23-257 (299)
251 4azs_A Methyltransferase WBDD; 99.9 3.8E-28 1.3E-32 285.6 6.3 186 533-730 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.1E-25 1.1E-29 259.3 7.7 182 531-730 341-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 9.5E-22 3.3E-26 210.8 9.6 141 531-704 95-253 (282)
254 3rgz_A Protein brassinosteroid 99.8 4.7E-19 1.6E-23 216.5 7.9 113 339-451 630-744 (768)
255 1zth_A RIO1 serine protein kin 99.7 5.5E-18 1.9E-22 179.1 10.9 134 530-679 51-219 (258)
256 1ogq_A PGIP-2, polygalacturona 99.7 7.2E-18 2.5E-22 183.5 6.0 181 264-451 124-308 (313)
257 4fcg_A Uncharacterized protein 99.7 6.9E-17 2.4E-21 177.0 10.3 109 339-448 181-291 (328)
258 3rgz_A Protein brassinosteroid 99.6 1.3E-16 4.6E-21 194.8 8.1 83 364-446 631-716 (768)
259 1p9a_G Platelet glycoprotein I 99.6 1E-15 3.5E-20 164.6 13.7 156 264-451 54-212 (290)
260 3oja_A Leucine-rich immune mol 99.6 5E-17 1.7E-21 187.8 3.6 171 264-449 57-252 (487)
261 3m19_A Variable lymphocyte rec 99.6 1.8E-15 6.1E-20 159.0 14.9 157 265-450 35-195 (251)
262 2o6q_A Variable lymphocyte rec 99.6 7.3E-16 2.5E-20 163.8 11.6 179 266-451 38-222 (270)
263 4fcg_A Uncharacterized protein 99.6 2.1E-16 7E-21 173.2 7.2 175 263-444 125-311 (328)
264 2v9t_B SLIT homolog 2 protein 99.6 1.6E-15 5.6E-20 156.1 13.4 153 268-451 14-169 (220)
265 1ozn_A Reticulon 4 receptor; N 99.6 3.6E-16 1.2E-20 167.5 8.7 181 265-451 56-242 (285)
266 3zyj_A Leucine-rich repeat-con 99.6 6.1E-16 2.1E-20 176.5 10.7 180 264-451 111-296 (440)
267 3rfs_A Internalin B, repeat mo 99.6 1.6E-15 5.6E-20 161.4 13.1 179 264-451 40-222 (272)
268 2v70_A SLIT-2, SLIT homolog 2 99.6 1.3E-15 4.3E-20 157.0 11.7 154 268-451 14-170 (220)
269 1ogq_A PGIP-2, polygalacturona 99.6 4.5E-16 1.5E-20 169.3 6.5 176 263-446 99-280 (313)
270 1p9a_G Platelet glycoprotein I 99.6 2.9E-15 9.9E-20 161.0 12.2 173 264-447 9-185 (290)
271 3zyi_A Leucine-rich repeat-con 99.6 1.5E-15 5.1E-20 173.9 10.3 180 264-451 122-307 (452)
272 3e6j_A Variable lymphocyte rec 99.6 8.8E-15 3E-19 151.6 14.2 151 268-451 22-176 (229)
273 2z66_A Variable lymphocyte rec 99.6 8.1E-16 2.8E-20 166.4 6.2 182 264-451 77-265 (306)
274 4gyi_A RIO2 kinase; protein ki 99.6 6E-16 2.1E-20 170.6 5.1 135 529-678 98-264 (397)
275 1w8a_A SLIT protein; signaling 99.6 5.1E-15 1.7E-19 149.0 10.1 154 268-451 11-166 (192)
276 1ozn_A Reticulon 4 receptor; N 99.5 5E-15 1.7E-19 158.5 8.9 177 265-446 32-213 (285)
277 2z62_A TOLL-like receptor 4, v 99.5 5E-15 1.7E-19 157.7 7.7 180 264-451 51-241 (276)
278 3v47_A TOLL-like receptor 5B a 99.5 3.6E-14 1.2E-18 162.2 14.7 186 265-451 180-412 (455)
279 3vq2_A TLR4, TOLL-like recepto 99.5 3.7E-15 1.2E-19 177.0 6.4 182 263-451 374-562 (606)
280 3oja_B Anopheles plasmodium-re 99.5 6E-15 2.1E-19 175.0 8.0 180 264-448 146-359 (597)
281 3o6n_A APL1; leucine-rich repe 99.5 6.9E-15 2.4E-19 164.8 7.7 180 264-448 140-353 (390)
282 2v70_A SLIT-2, SLIT homolog 2 99.5 3.3E-14 1.1E-18 146.3 12.1 138 266-432 33-173 (220)
283 3m19_A Variable lymphocyte rec 99.5 8.3E-14 2.9E-18 146.2 14.4 149 267-447 16-168 (251)
284 3rfs_A Internalin B, repeat mo 99.5 2.5E-14 8.6E-19 152.1 10.3 159 264-429 62-222 (272)
285 4eco_A Uncharacterized protein 99.5 5.1E-14 1.7E-18 168.2 13.5 182 266-450 403-603 (636)
286 2xot_A Amphoterin-induced prot 99.5 9.5E-15 3.2E-19 162.1 6.3 155 266-451 40-206 (361)
287 2o6s_A Variable lymphocyte rec 99.5 1.7E-13 5.7E-18 139.4 14.8 88 341-428 76-164 (208)
288 2ell_A Acidic leucine-rich nuc 99.5 5E-14 1.7E-18 138.2 10.0 136 264-431 23-165 (168)
289 3zyi_A Leucine-rich repeat-con 99.5 3.7E-14 1.3E-18 162.3 10.3 177 263-446 97-278 (452)
290 4ezg_A Putative uncharacterize 99.5 3.5E-14 1.2E-18 143.4 8.9 148 263-445 42-192 (197)
291 3zyj_A Leucine-rich repeat-con 99.5 4.1E-14 1.4E-18 161.3 10.1 178 263-447 86-268 (440)
292 4ecn_A Leucine-rich repeat pro 99.5 1.1E-13 3.6E-18 169.4 14.3 179 266-447 645-840 (876)
293 1xku_A Decorin; proteoglycan, 99.5 4.6E-14 1.6E-18 154.3 10.0 172 266-447 122-306 (330)
294 2id5_A Lingo-1, leucine rich r 99.5 2.2E-14 7.4E-19 165.2 7.7 181 264-451 151-337 (477)
295 1w8a_A SLIT protein; signaling 99.5 9.3E-14 3.2E-18 139.7 11.2 111 341-451 29-143 (192)
296 2o6s_A Variable lymphocyte rec 99.5 1.9E-13 6.6E-18 139.0 13.6 150 269-450 11-164 (208)
297 3e6j_A Variable lymphocyte rec 99.5 1.8E-13 6.1E-18 141.7 13.4 136 265-429 40-176 (229)
298 2o6q_A Variable lymphocyte rec 99.5 6.5E-14 2.2E-18 148.7 10.3 171 267-446 18-193 (270)
299 2v9t_B SLIT homolog 2 protein 99.5 1.2E-13 4E-18 142.2 11.8 133 265-427 32-167 (220)
300 2z66_A Variable lymphocyte rec 99.5 2.5E-14 8.6E-19 154.6 6.9 175 265-445 28-210 (306)
301 1h6u_A Internalin H; cell adhe 99.5 5E-14 1.7E-18 152.7 9.3 170 264-448 62-231 (308)
302 3oja_B Anopheles plasmodium-re 99.5 2.5E-14 8.7E-19 169.6 7.2 174 263-444 97-311 (597)
303 1xku_A Decorin; proteoglycan, 99.5 6.3E-14 2.1E-18 153.3 9.5 176 263-447 98-276 (330)
304 2z62_A TOLL-like receptor 4, v 99.5 1.6E-13 5.6E-18 145.9 12.2 152 265-445 28-188 (276)
305 3o6n_A APL1; leucine-rich repe 99.5 4.5E-14 1.5E-18 158.2 8.1 39 264-302 92-131 (390)
306 2wfh_A SLIT homolog 2 protein 99.5 1.5E-13 5.1E-18 138.4 10.8 109 341-451 31-143 (193)
307 4ecn_A Leucine-rich repeat pro 99.5 4.7E-14 1.6E-18 172.5 8.5 141 300-445 269-526 (876)
308 2z80_A TOLL-like receptor 2, v 99.5 5.3E-14 1.8E-18 155.4 8.1 181 264-450 99-317 (353)
309 1wwl_A Monocyte differentiatio 99.5 1.7E-14 5.8E-19 156.7 3.8 174 264-445 94-285 (312)
310 1wwl_A Monocyte differentiatio 99.5 1.1E-14 3.8E-19 158.2 1.9 198 222-447 95-309 (312)
311 3t6q_A CD180 antigen; protein- 99.4 4.3E-14 1.5E-18 167.7 7.0 112 339-451 447-564 (606)
312 1dce_A Protein (RAB geranylger 99.4 1.6E-14 5.5E-19 169.5 3.1 181 263-447 347-546 (567)
313 2z81_A CD282 antigen, TOLL-lik 99.4 1.1E-13 3.9E-18 162.0 9.5 177 265-450 310-513 (549)
314 2xwt_C Thyrotropin receptor; s 99.4 4.2E-14 1.4E-18 147.2 4.9 102 343-445 132-237 (239)
315 2z63_A TOLL-like receptor 4, v 99.4 1.2E-13 4E-18 162.5 9.3 183 263-452 345-536 (570)
316 4eco_A Uncharacterized protein 99.4 1.2E-13 4.1E-18 164.9 9.2 175 263-445 247-444 (636)
317 3v47_A TOLL-like receptor 5B a 99.4 1.2E-13 3.9E-18 157.9 8.6 107 341-447 275-384 (455)
318 1h6u_A Internalin H; cell adhe 99.4 2.1E-13 7.1E-18 147.8 10.2 170 263-447 39-208 (308)
319 2ft3_A Biglycan; proteoglycan, 99.4 7.1E-14 2.4E-18 153.0 6.3 172 265-447 123-307 (332)
320 3o53_A Protein LRIM1, AGAP0063 99.4 9.2E-14 3.2E-18 151.2 6.8 105 341-448 144-251 (317)
321 4g8a_A TOLL-like receptor 4; l 99.4 1.5E-13 5E-18 163.4 8.9 139 265-432 52-193 (635)
322 2xot_A Amphoterin-induced prot 99.4 4.1E-13 1.4E-17 148.9 11.9 148 268-446 21-175 (361)
323 1m9s_A Internalin B; cell inva 99.4 4.3E-13 1.5E-17 158.4 12.7 169 264-448 42-211 (605)
324 2id5_A Lingo-1, leucine rich r 99.4 1.1E-13 3.9E-18 159.2 7.3 176 266-447 33-213 (477)
325 1h6t_A Internalin B; cell adhe 99.4 2.6E-13 9E-18 145.8 9.6 169 264-448 45-214 (291)
326 4g8a_A TOLL-like receptor 4; l 99.4 3.4E-13 1.2E-17 160.2 11.2 183 263-451 395-584 (635)
327 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 3.7E-13 1.3E-17 158.3 11.4 156 264-450 352-513 (562)
328 2ft3_A Biglycan; proteoglycan, 99.4 1.6E-13 5.6E-18 150.1 7.7 176 263-448 100-278 (332)
329 2z7x_B TOLL-like receptor 1, v 99.4 5.3E-13 1.8E-17 155.3 11.8 155 263-450 322-484 (520)
330 4fmz_A Internalin; leucine ric 99.4 2.9E-13 9.9E-18 148.9 9.0 169 264-445 176-344 (347)
331 2z80_A TOLL-like receptor 2, v 99.4 5E-14 1.7E-18 155.6 2.9 171 266-444 53-232 (353)
332 3t6q_A CD180 antigen; protein- 99.4 3.1E-13 1E-17 160.4 9.7 177 264-445 277-460 (606)
333 2o6r_A Variable lymphocyte rec 99.4 1.5E-12 5.2E-17 128.8 13.2 131 268-429 10-141 (177)
334 4glp_A Monocyte differentiatio 99.4 6.9E-14 2.4E-18 151.7 3.5 177 263-446 89-284 (310)
335 2o6r_A Variable lymphocyte rec 99.4 1.3E-12 4.4E-17 129.3 12.4 121 329-450 8-140 (177)
336 2wfh_A SLIT homolog 2 protein 99.4 6.3E-13 2.2E-17 133.7 10.2 130 268-429 13-143 (193)
337 3vq2_A TLR4, TOLL-like recepto 99.4 8.1E-13 2.8E-17 156.7 12.4 154 265-447 32-194 (606)
338 2je0_A Acidic leucine-rich nuc 99.4 2.7E-13 9.1E-18 130.2 6.4 127 264-421 16-149 (149)
339 1xeu_A Internalin C; cellular 99.4 9E-13 3.1E-17 139.4 11.0 148 264-449 40-187 (263)
340 1ziw_A TOLL-like receptor 3; i 99.4 4.3E-13 1.5E-17 161.4 9.4 91 361-451 532-626 (680)
341 4glp_A Monocyte differentiatio 99.4 7.2E-13 2.5E-17 143.6 10.2 155 263-447 143-307 (310)
342 3g39_A Variable lymphocyte rec 99.4 9.3E-13 3.2E-17 129.6 9.5 105 342-450 10-118 (170)
343 1h6t_A Internalin B; cell adhe 99.4 8.8E-13 3E-17 141.7 9.4 155 264-434 67-221 (291)
344 2xwt_C Thyrotropin receptor; s 99.4 5.6E-13 1.9E-17 138.6 7.2 149 266-445 32-190 (239)
345 4ezg_A Putative uncharacterize 99.3 2.2E-12 7.6E-17 130.0 10.7 131 264-426 65-195 (197)
346 3oja_A Leucine-rich immune mol 99.3 3.1E-13 1.1E-17 156.0 5.0 171 264-445 33-225 (487)
347 1ziw_A TOLL-like receptor 3; i 99.3 2E-12 6.7E-17 155.6 11.4 162 265-432 25-191 (680)
348 2r9u_A Variable lymphocyte rec 99.3 2.8E-12 9.6E-17 126.7 10.5 104 343-450 14-121 (174)
349 3g39_A Variable lymphocyte rec 99.3 3.7E-12 1.3E-16 125.4 11.3 89 341-429 30-119 (170)
350 3j0a_A TOLL-like receptor 5; m 99.3 2E-12 6.7E-17 159.6 11.3 161 265-431 24-193 (844)
351 2z63_A TOLL-like receptor 4, v 99.3 2.9E-12 1E-16 150.5 12.0 153 265-446 28-189 (570)
352 2z7x_B TOLL-like receptor 1, v 99.3 1.6E-12 5.6E-17 151.1 9.5 144 268-445 3-149 (520)
353 4b8c_D Glucose-repressible alc 99.3 3.1E-13 1E-17 163.5 3.3 89 342-432 248-336 (727)
354 4b8c_D Glucose-repressible alc 99.3 1.1E-12 3.9E-17 158.5 8.1 159 261-447 169-329 (727)
355 1m9s_A Internalin B; cell inva 99.3 1.7E-12 5.8E-17 153.3 9.3 155 264-434 64-218 (605)
356 2r9u_A Variable lymphocyte rec 99.3 6E-12 2E-16 124.4 11.7 90 341-431 33-123 (174)
357 2ell_A Acidic leucine-rich nuc 99.3 2.5E-12 8.5E-17 126.0 8.7 105 340-446 23-132 (168)
358 1dce_A Protein (RAB geranylger 99.3 2.8E-12 9.6E-17 150.4 10.7 89 339-429 461-550 (567)
359 2je0_A Acidic leucine-rich nuc 99.3 1.9E-12 6.5E-17 124.1 7.4 106 340-446 16-125 (149)
360 3o53_A Protein LRIM1, AGAP0063 99.3 3.2E-13 1.1E-17 146.9 2.3 153 264-447 119-275 (317)
361 4fmz_A Internalin; leucine ric 99.3 3.2E-12 1.1E-16 140.4 10.2 169 264-447 154-324 (347)
362 2z81_A CD282 antigen, TOLL-lik 99.3 4.7E-13 1.6E-17 156.7 3.4 174 265-445 26-207 (549)
363 1xeu_A Internalin C; cellular 99.3 3.2E-12 1.1E-16 135.2 9.1 132 264-434 62-193 (263)
364 3j0a_A TOLL-like receptor 5; m 99.3 3E-12 1E-16 157.9 10.3 106 341-446 266-374 (844)
365 3cvr_A Invasion plasmid antige 99.3 7E-12 2.4E-16 146.6 12.7 145 264-432 99-250 (571)
366 1o6v_A Internalin A; bacterial 99.3 5.2E-12 1.8E-16 144.9 11.1 104 339-447 285-388 (466)
367 2ca6_A RAN GTPase-activating p 99.3 2.3E-13 8E-18 152.2 -1.4 181 263-447 92-316 (386)
368 3bz5_A Internalin-J, INLJ; leu 99.3 1.1E-11 3.7E-16 141.9 12.2 159 264-443 105-263 (457)
369 1o6v_A Internalin A; bacterial 99.3 6.7E-12 2.3E-16 144.0 10.5 167 264-445 176-342 (466)
370 1a9n_A U2A', U2A'; complex (nu 99.3 4.9E-12 1.7E-16 125.1 8.0 129 264-425 18-153 (176)
371 3cvr_A Invasion plasmid antige 99.3 8.4E-12 2.9E-16 145.9 10.8 154 265-446 80-242 (571)
372 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 5.8E-12 2E-16 148.1 8.3 144 268-445 34-180 (562)
373 3bz5_A Internalin-J, INLJ; leu 99.2 1.5E-11 5.1E-16 140.7 11.4 162 264-445 41-202 (457)
374 2ifg_A High affinity nerve gro 99.2 1E-11 3.6E-16 136.5 8.7 104 345-451 12-120 (347)
375 3g06_A SSPH2 (leucine-rich rep 99.2 1.1E-10 3.8E-15 138.0 15.8 74 365-446 221-296 (622)
376 3g06_A SSPH2 (leucine-rich rep 99.2 2.1E-10 7.1E-15 135.7 17.3 53 388-446 221-273 (622)
377 2ast_B S-phase kinase-associat 99.2 1.5E-12 5.3E-17 142.3 -2.1 176 264-444 92-282 (336)
378 1a9n_A U2A', U2A'; complex (nu 99.2 4.4E-11 1.5E-15 118.1 8.5 104 340-447 18-126 (176)
379 2ca6_A RAN GTPase-activating p 99.2 9.2E-12 3.1E-16 139.2 3.8 177 264-446 59-286 (386)
380 1jl5_A Outer protein YOPM; leu 99.1 1.6E-10 5.5E-15 132.0 13.3 138 265-445 131-268 (454)
381 1jl5_A Outer protein YOPM; leu 99.1 2E-12 6.9E-17 147.8 -2.7 164 261-444 7-183 (454)
382 3tm0_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.4E-15 122.4 11.1 138 530-677 18-212 (263)
383 4ay9_X Follicle-stimulating ho 99.1 2.3E-11 8E-16 134.1 3.2 176 265-447 30-236 (350)
384 1ds9_A Outer arm dynein; leuci 99.1 1.3E-12 4.3E-17 132.0 -6.6 123 274-430 34-158 (198)
385 2ast_B S-phase kinase-associat 99.1 1.1E-11 3.7E-16 135.5 -0.2 176 265-446 70-259 (336)
386 2ifg_A High affinity nerve gro 99.0 2.5E-10 8.7E-15 125.4 9.2 97 330-427 10-118 (347)
387 3goz_A Leucine-rich repeat-con 99.0 1.6E-11 5.6E-16 135.9 -2.7 175 265-445 22-236 (362)
388 1nd4_A Aminoglycoside 3'-phosp 99.0 6E-10 2.1E-14 116.6 9.2 130 533-677 26-213 (264)
389 3goz_A Leucine-rich repeat-con 99.0 4.7E-11 1.6E-15 132.3 -1.1 176 265-446 80-296 (362)
390 1z7x_W Ribonuclease inhibitor; 98.9 7E-11 2.4E-15 134.9 -3.6 136 266-425 200-354 (461)
391 4ay9_X Follicle-stimulating ho 98.9 7.1E-10 2.4E-14 122.1 3.7 165 269-443 84-255 (350)
392 1z7x_W Ribonuclease inhibitor; 98.9 3.3E-10 1.1E-14 129.3 0.5 158 264-445 27-210 (461)
393 3dxp_A Putative acyl-COA dehyd 98.8 5.1E-09 1.8E-13 115.6 9.4 140 532-678 44-248 (359)
394 1ds9_A Outer arm dynein; leuci 98.8 9.9E-11 3.4E-15 118.0 -5.1 105 339-448 46-154 (198)
395 3sg8_A APH(2'')-ID; antibiotic 98.8 3.9E-09 1.3E-13 113.8 5.3 186 532-732 26-289 (304)
396 3un9_A NLR family member X1; l 98.7 1.6E-09 5.6E-14 120.2 -1.2 156 264-425 71-252 (372)
397 3un9_A NLR family member X1; l 98.6 3.5E-09 1.2E-13 117.6 0.5 140 265-410 101-261 (372)
398 3sb4_A Hypothetical leucine ri 98.5 6E-08 2.1E-12 105.6 6.6 93 340-436 225-320 (329)
399 2jwp_A Malectin, MGC80075; sug 98.5 9.1E-08 3.1E-12 94.0 6.9 107 119-242 7-113 (174)
400 3rw6_A Nuclear RNA export fact 98.4 1.1E-07 3.8E-12 99.8 4.3 78 340-418 169-257 (267)
401 3ogk_B Coronatine-insensitive 98.4 2.3E-08 7.8E-13 117.8 -2.9 105 341-445 403-524 (592)
402 3ogk_B Coronatine-insensitive 98.3 1E-07 3.6E-12 112.2 1.8 106 340-445 377-499 (592)
403 3d1u_A Putative fructosamine-3 98.3 2.3E-06 7.8E-11 91.3 11.8 74 532-609 21-97 (288)
404 3sb4_A Hypothetical leucine ri 98.3 1E-06 3.5E-11 95.8 8.4 79 364-445 225-308 (329)
405 3r70_A Aminoglycoside phosphot 98.3 1.8E-06 6.2E-11 93.5 10.3 131 532-678 43-237 (320)
406 3rw6_A Nuclear RNA export fact 98.2 1.8E-07 6.1E-12 98.1 0.5 82 346-430 148-238 (267)
407 4gkh_A Aminoglycoside 3'-phosp 98.2 8.4E-06 2.9E-10 85.6 12.4 134 533-677 31-222 (272)
408 2p1m_B Transport inhibitor res 98.2 6.1E-08 2.1E-12 114.2 -5.0 180 264-445 288-492 (594)
409 3tdw_A Gentamicin resistance p 98.1 9.1E-06 3.1E-10 87.4 11.3 135 532-678 25-224 (306)
410 2jwp_A Malectin, MGC80075; sug 98.1 2E-05 6.8E-10 77.2 11.8 97 1-101 58-171 (174)
411 3ats_A Putative uncharacterize 98.0 6E-06 2.1E-10 90.6 8.0 79 532-610 26-121 (357)
412 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.7E-05 5.7E-10 87.5 11.2 141 532-678 47-243 (362)
413 1io0_A Tropomodulin; LRR prote 98.0 2E-06 6.7E-11 85.4 1.9 118 283-425 31-164 (185)
414 2ra8_A Uncharacterized protein 97.9 2.1E-06 7.1E-11 94.6 0.5 153 264-445 171-341 (362)
415 1io0_A Tropomodulin; LRR prote 97.8 2.8E-06 9.7E-11 84.2 -0.5 106 340-445 35-162 (185)
416 2ra8_A Uncharacterized protein 97.8 5.9E-06 2E-10 90.9 1.6 106 340-445 192-318 (362)
417 2q83_A YTAA protein; 2635576, 97.7 0.0001 3.5E-09 79.9 11.0 140 533-677 39-251 (346)
418 2p1m_B Transport inhibitor res 97.7 2.7E-06 9.4E-11 99.9 -1.9 37 386-422 287-324 (594)
419 2olc_A MTR kinase, methylthior 97.7 0.00011 3.8E-09 81.8 10.3 74 532-607 36-120 (397)
420 3f7w_A Putative fructosamine-3 97.6 0.00015 5.2E-09 76.9 10.6 73 532-608 21-96 (288)
421 4fdw_A Leucine rich hypothetic 97.6 6.5E-05 2.2E-09 83.9 7.4 169 264-445 179-356 (401)
422 3jr1_A Putative fructosamine-3 97.5 0.00039 1.3E-08 74.7 11.8 138 532-674 42-232 (312)
423 2pyw_A Uncharacterized protein 97.5 0.00014 4.8E-09 81.7 7.5 79 648-727 232-313 (420)
424 4fdw_A Leucine rich hypothetic 97.2 0.00043 1.5E-08 77.2 6.9 154 266-433 204-365 (401)
425 3e4g_A ATP synthase subunit S, 97.0 0.00012 4.1E-09 71.3 0.5 85 341-425 61-153 (176)
426 1nw1_A Choline kinase (49.2 KD 96.7 0.0034 1.1E-07 70.6 9.6 72 532-609 79-159 (429)
427 3csv_A Aminoglycoside phosphot 96.7 0.008 2.7E-07 64.8 12.2 141 533-678 25-217 (333)
428 2ppq_A HSK, HK, homoserine kin 96.6 0.0027 9.3E-08 68.1 7.7 143 532-677 28-216 (322)
429 3rfe_A Platelet glycoprotein I 96.6 0.0026 9E-08 58.7 6.4 36 389-424 32-67 (130)
430 3rfe_A Platelet glycoprotein I 96.6 0.0025 8.4E-08 59.0 6.0 56 344-401 11-68 (130)
431 3dxq_A Choline/ethanolamine ki 96.6 0.0034 1.2E-07 66.7 7.8 70 532-609 24-95 (301)
432 1zyl_A Hypothetical protein YI 96.5 0.012 4.2E-07 63.1 11.7 141 533-677 33-222 (328)
433 3feg_A Choline/ethanolamine ki 96.5 0.0061 2.1E-07 67.1 9.3 141 532-677 56-253 (379)
434 2qg7_A Ethanolamine kinase PV0 96.4 0.0095 3.2E-07 67.4 10.8 73 532-609 114-188 (458)
435 3c5i_A Choline kinase; choline 96.0 0.0088 3E-07 65.6 7.4 73 532-609 39-121 (369)
436 3i1a_A Spectinomycin phosphotr 95.7 0.045 1.5E-06 59.2 11.4 31 648-678 206-236 (339)
437 3e4g_A ATP synthase subunit S, 95.5 0.0028 9.7E-08 61.6 0.8 92 356-447 52-152 (176)
438 3f2s_A CK, chetk-alpha, cholin 95.1 0.074 2.5E-06 58.8 10.3 141 533-677 59-279 (401)
439 1pgv_A TMD-1, tropomodulin TMD 95.0 0.0073 2.5E-07 59.8 1.7 82 342-423 71-168 (197)
440 2yle_A Protein spire homolog 1 94.3 0.38 1.3E-05 48.0 12.1 102 607-728 33-134 (229)
441 3mes_A Choline kinase; malaria 94.2 0.079 2.7E-06 59.1 8.1 73 532-609 76-157 (424)
442 1pgv_A TMD-1, tropomodulin TMD 93.5 0.014 4.8E-07 57.7 0.3 82 341-422 41-136 (197)
443 4fs7_A Uncharacterized protein 92.9 0.17 5.9E-06 55.6 7.9 80 340-422 296-376 (394)
444 4gt6_A Cell surface protein; l 92.1 0.29 1E-05 53.7 8.5 75 342-419 266-341 (394)
445 4h09_A Hypothetical leucine ri 91.1 0.37 1.3E-05 52.4 7.8 75 342-420 264-341 (379)
446 4h09_A Hypothetical leucine ri 90.7 0.52 1.8E-05 51.2 8.6 98 341-442 240-341 (379)
447 4gt6_A Cell surface protein; l 89.9 0.57 1.9E-05 51.4 8.1 80 341-425 288-370 (394)
448 4fs7_A Uncharacterized protein 89.0 0.78 2.7E-05 50.3 8.3 96 341-443 276-375 (394)
449 3g15_A CK, chetk-alpha, cholin 84.9 1.4 4.8E-05 48.5 7.4 29 649-677 245-279 (401)
450 4ann_A ESSB; membrane protein, 80.5 4 0.00014 40.5 7.8 117 580-732 43-159 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 73.4 0.33 1.1E-05 54.7 -2.6 59 531-592 147-214 (463)
452 4ano_A ESSB; membrane protein, 71.6 7 0.00024 38.9 6.8 115 580-731 48-163 (219)
453 2ks1_B Epidermal growth factor 59.9 2.7 9.2E-05 30.3 0.8 25 459-483 12-37 (44)
454 2jwa_A Receptor tyrosine-prote 53.7 2 6.9E-05 30.9 -0.7 26 457-482 11-36 (44)
455 2l2t_A Receptor tyrosine-prote 49.9 3.6 0.00012 29.6 0.1 12 459-470 11-22 (44)
456 1nrp_R Receptor based peptide 37.6 11 0.00039 22.5 0.9 16 130-145 6-21 (26)
457 1nro_R Receptor based peptide 35.8 13 0.00046 22.4 1.0 16 130-145 6-21 (27)
458 2w3j_A Carbohydrate binding mo 26.8 3.5E+02 0.012 24.3 10.6 88 14-106 42-134 (145)
459 1cja_A Protein (actin-fragmin 25.1 3.8E+02 0.013 28.2 10.6 136 532-678 75-237 (342)
460 2k9y_A Ephrin type-A receptor 23.0 17 0.00057 25.5 -0.1 11 461-471 16-26 (41)
461 2k1k_A Ephrin type-A receptor 21.1 18 0.00062 25.1 -0.2 10 459-468 12-21 (38)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.1e-51 Score=447.84 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=205.9
Q ss_pred HhhccccccCceEEEEEEEC------CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35688999999999999875 478899999987766667889999999999999999999999999999999999
Q ss_pred eccCCCHHhhhccccc-----------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEE
Q 003039 603 FMHNGTLKEHLYGTLT-----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~ 671 (854)
||++|+|.++++.... ....++|.+++.|+.|||+||+|||+. +|+||||||+||||++++.+||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 9999999999965321 234689999999999999999999998 99999999999999999999999
Q ss_pred eeeccccccCCCC-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003039 672 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|||+|+....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||...... .+...
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~---- 272 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----EAIDC---- 272 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----HHHHH----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----HHHHH----
Confidence 9999986544322 23345679999999999999999999999999999999999 89999765421 22222
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+..+.-.+ .+.....++.+|+.+||+.||++||||.||+++|+.+..
T Consensus 273 i~~g~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 273 ITQGRELE---------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHTCCCC---------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCC---------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 22221111 111223468899999999999999999999999998754
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.6e-51 Score=445.05 Aligned_cols=256 Identities=27% Similarity=0.478 Sum_probs=211.1
Q ss_pred HhhccccccCceEEEEEEEC------CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 46789999999999999874 467899999987766667889999999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccc---------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 003039 603 FMHNGTLKEHLYGTL---------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DF 673 (854)
||++|+|.++|+... .....++|.+++.|+.|||+||+|||++ +|+||||||+||||+.++.+||+||
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCc
Confidence 999999999996532 2345799999999999999999999998 9999999999999999999999999
Q ss_pred eccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003039 674 GLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+... +.
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~----i~ 244 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIEC----IT 244 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHH----HH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----HH
Confidence 999865443222 2234569999999999999999999999999999999999 89999765421 22222 22
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+.... .+.....++.+|+.+||+.+|++||||.||++.|+++.
T Consensus 245 ~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 245 QGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 232211 11122346889999999999999999999999999864
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.9e-52 Score=450.34 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=210.2
Q ss_pred HHhhccccccCceEEEEEEEC------CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
..|.++||+|+||+||+|++. +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+++..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 456789999999999999873 46789999997543 33457899999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcE
Q 003039 601 YEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 668 (854)
||||++|+|.++|+... .....++|..++.|+.|||+||+|||++ +|+||||||+||||++++++
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 99999999999996432 1234689999999999999999999998 99999999999999999999
Q ss_pred EEEeeeccccccCCC-CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHH
Q 003039 669 KVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWA 746 (854)
Q Consensus 669 kl~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~ 746 (854)
||+|||+|+...... ........||+.|||||++.++.++.++|||||||+||||+| |+.||.+... ..+...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~----~~~~~~- 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVVEM- 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----HHHHHH-
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----HHHHHH-
Confidence 999999998654332 223345679999999999999999999999999999999999 8999976542 123222
Q ss_pred HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 747 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+..+.... .+..+...+.+|+.+||+.+|++||||.||+++|+..
T Consensus 260 ---i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ---IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22332211 1122334688999999999999999999999999864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=430.85 Aligned_cols=254 Identities=31% Similarity=0.520 Sum_probs=199.5
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
.+.++||+|+||+||+|+++ ..||||+++... ....+.|.+|+++|++++|||||+++|+|.+ +..++|||||++
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~g 115 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp CEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred EEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCC
Confidence 35789999999999999976 369999987543 3345679999999999999999999999865 568999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC-Cc
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-SH 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~-~~ 685 (854)
|+|.++|+.. ...++|.+++.|+.|||+||+|||++ +|+||||||+||||++++.+||+|||+|+...... ..
T Consensus 116 GsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 116 SSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999642 45699999999999999999999998 99999999999999999999999999998654332 22
Q ss_pred eeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 686 VSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~---~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|||||++.+ +.|+.++|||||||+||||+||+.||.+.... ..+ ...+..+.. .|.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~---~~~----~~~~~~~~~----~p~ 258 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQI----IFMVGRGYA----SPD 258 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHH----HHHHHTTCC----CCC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH---HHH----HHHHhcCCC----CCC
Confidence 3445679999999999964 46899999999999999999999999764411 111 112222211 111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+. .....+...+.+|+.+||+.+|++||||.||+++|+.+
T Consensus 259 ~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 259 LS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred cc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11 11122334688999999999999999999999999875
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1e-48 Score=427.60 Aligned_cols=250 Identities=22% Similarity=0.289 Sum_probs=203.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
.+.++||+|+||+||+|+++ +|+.||||+++.... ..+|+.+|++++|||||++++++.+++..++|||||++|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 34678999999999999986 689999999975432 246999999999999999999999999999999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC-cEEEEeeeccccccCCCCc-
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGASH- 685 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkl~DFGla~~~~~~~~~- 685 (854)
+|.++|.. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++ ++||+|||+|+........
T Consensus 136 ~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 136 SLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp BHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99999953 45689999999999999999999998 999999999999999988 6999999999866443211
Q ss_pred ---eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 686 ---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ---~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||......+....+.. +... . ..
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--------~~~~-~--~~ 277 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--------EPPP-I--RE 277 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--------SCCG-G--GG
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--------CCCC-c--hh
Confidence 22345799999999999999999999999999999999999999986553322212111 1100 0 01
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+... ....+.+++.+|++.||++|||+.||+++|..++.
T Consensus 278 ~~~~----~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 278 IPPS----CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp SCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcc----CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 1122 23457899999999999999999999999988765
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.2e-48 Score=421.38 Aligned_cols=266 Identities=23% Similarity=0.342 Sum_probs=202.6
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecC----eEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~----~~~LV~E~~ 604 (854)
.+.++||+|+||+||+|+++ |+.||||+++... .....++.|+..+.+++|||||+++|+|.+++ ..+||||||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 45789999999999999985 8999999996442 22233455777778899999999999998764 579999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-----CCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
++|+|.++|+. ..++|..+.+++.|+|+||+|||+++ .++|+||||||+||||+.++++||+|||+|+..
T Consensus 84 ~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 84 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999953 45899999999999999999999863 358999999999999999999999999999876
Q ss_pred cCCCCce---eecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhCCccccccccccc-c------cchH
Q 003039 680 VDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISGQEAISNEKFGAN-C------RNIV 743 (854)
Q Consensus 680 ~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~-~------~~l~ 743 (854)
....... .....||+.|||||++.+. .++.++|||||||+||||+||+.|+......+. . ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5443322 2345799999999998754 477899999999999999999888754321110 0 0011
Q ss_pred HHHHHhhhcCCcccccCccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 744 QWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
......+..+ .++|.+... .+.+....+.+|+.+||+.||++||||.||++.|+++..
T Consensus 239 ~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 239 EEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1122222111 122333222 234566788999999999999999999999999998754
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7e-49 Score=430.13 Aligned_cols=247 Identities=24% Similarity=0.334 Sum_probs=205.1
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
.+.++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..+||||||++|
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 156 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred EEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 34578999999999999986 68999999997665555677899999999999999999999999999999999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+...... ...
T Consensus 157 ~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 157 ALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp EHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred cHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 99998842 4589999999999999999999998 99999999999999999999999999998664432 233
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcC
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+...+ ..+. .+.+..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i----~~~~-----~~~~~~-- 292 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMI----RDNL-----PPRLKN-- 292 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHH----HHSS-----CCCCSC--
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHH----HcCC-----CCCCCc--
Confidence 4567999999999999999999999999999999999999999765421 111111 1111 111110
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......+.+|+.+|++.||++|||+.|+++|
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01112357899999999999999999999876
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.1e-49 Score=435.57 Aligned_cols=265 Identities=26% Similarity=0.396 Sum_probs=213.0
Q ss_pred HHHHHHHhhccccccCceEEEEEEECC------CcEEEEEEEccCCc-ccHHHHHHHHHHHccCCC-CceeeEeeeeeec
Q 003039 523 IEDATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHH-RNLVQFLGYCQEE 594 (854)
Q Consensus 523 ~~~~~~~~~~~iG~G~fg~Vy~a~~~~------~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~H-pnIv~l~g~~~~~ 594 (854)
+....+.+.+.||+|+||+||+|++.. ++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+|.+.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 334455667899999999999998752 36799999976543 345679999999999965 9999999999764
Q ss_pred -CeEEEEEEeccCCCHHhhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEE
Q 003039 595 -GRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 595 -~~~~LV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
+..++|||||++|+|.++|+.... ....++|.+++.++.|||+||+|||++ +||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcccee
Confidence 568999999999999999965321 134589999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccc
Q 003039 662 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 739 (854)
Q Consensus 662 l~~~~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~ 739 (854)
+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||+||||+| |+.||.+....+
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-- 295 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 295 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999999999866544333 3345679999999999999999999999999999999998 999997654221
Q ss_pred cchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+ ...+..+.-.. .... ...++.+++.+||+.||++||||.||+++|+++++.
T Consensus 296 -~~----~~~i~~g~~~~-----~p~~----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 296 -EF----CRRLKEGTRMR-----APDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp -HH----HHHHHHTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HH----HHHHHcCCCCC-----CCcc----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 12 22222332111 1111 234578999999999999999999999999998764
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.6e-48 Score=413.57 Aligned_cols=247 Identities=28% Similarity=0.414 Sum_probs=196.8
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeee----cCeEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~----~~~~~LV~ 601 (854)
.++++||+|+||+||+|.+. +++.||||++.... ....+.|.+|+++|++++|||||+++++|.. ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 35678999999999999886 58899999996542 3345679999999999999999999999865 34689999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-CCcEEEEeeecccccc
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAV 680 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkl~DFGla~~~~ 680 (854)
|||++|+|.+++.. ...+++..+..++.||+.||+|||++. ++|+||||||+||||+. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999953 456899999999999999999999971 13999999999999984 7999999999998543
Q ss_pred CCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ... +...+..+.....++
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~-~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQ-IYRRVTSGVKPASFD 252 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHH-HHHHHTTTCCCGGGG
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHH-HHHHHHcCCCCCCCC
Confidence 2 23345679999999998864 699999999999999999999999975431 111 111222222111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ .++.+|+.+|++.||++|||+.|+++|
T Consensus 253 ----~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 ----KVAI----PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----ccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112 347889999999999999999999875
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.5e-49 Score=429.72 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=199.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
|.+.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++|||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 456789999999999999876 68999999997543 233567899999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.++|... ....+++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+..... .
T Consensus 106 ~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 106 EGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp TTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 999999999542 234578889999999999999999998 9999999999999999999999999999865322 1
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||...+.. .+.. .. ..+.... +.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~---~i-~~~~~~~-----~~ 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK----NLVL---KI-ISGSFPP-----VS 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHH---HH-HHTCCCC-----CC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHH---HH-HcCCCCC-----CC
Confidence 2234567999999999999999999999999999999999999999765421 1111 11 1222211 11
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..++ ..+.+|+.+|++.||++|||+.|+++|
T Consensus 247 ~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHYS----YDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2222 357899999999999999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-48 Score=420.66 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=205.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 567889999999999999876 68999999997532 23356789999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
|++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 114 ~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 114 AKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999995 345789999999999999999999998 99999999999999999999999999998765432
Q ss_pred -CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 684 -SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 -~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+..+ +.. .+..+++ .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----~~~----~i~~~~~------~ 252 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL----IFA----KIIKLEY------D 252 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHTCC------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHH----HHHcCCC------C
Confidence 234456789999999999999999999999999999999999999997654221 211 1112221 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....+ .++.+|+.+|++.||++|||++|+..+
T Consensus 253 ~p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 253 FPEKFF----PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCTTCC----HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCcccC----HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 112222 357899999999999999999987543
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.6e-47 Score=427.77 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=206.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
|.+.++||+|+||.||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..+||||||++
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 344578999999999999986 6899999999876666667789999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+...... ..
T Consensus 233 G~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~ 303 (423)
T 4fie_A 233 GALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PR 303 (423)
T ss_dssp EEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CC
T ss_pred CcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-cc
Confidence 99999884 34589999999999999999999998 99999999999999999999999999998664432 23
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+... +..+.....- ....
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~----i~~~~~~~~~---~~~~ 372 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKM----IRDNLPPRLK---NLHK 372 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHH----HHHSCCCCCS---CTTS
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHH----HHcCCCCCCc---cccc
Confidence 34567999999999999999999999999999999999999999765421 11111 1111110000 0112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+ ..+.+|+.+||+.||++|||+.|+++|
T Consensus 373 ~s----~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 373 VS----PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC----HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 22 357899999999999999999999876
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-47 Score=407.67 Aligned_cols=245 Identities=23% Similarity=0.400 Sum_probs=190.1
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.|.+.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+++|++++||||+++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3567789999999999999875 68999999997542 2335678999999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+...+.
T Consensus 94 y~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 94 YA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred CC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99 6899998853 45689999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......+||+.|||||++.+..+ +.++||||+||++|||++|+.||...... .+.+ .+..+...
T Consensus 166 --~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~----~~~~----~i~~~~~~----- 230 (275)
T 3hyh_A 166 --NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP----VLFK----NISNGVYT----- 230 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCC-----
T ss_pred --CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHcCCCC-----
Confidence 22345679999999999998876 57999999999999999999999765422 1111 12222211
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....+ ..+.+++.+|++.||++|||++|+++|
T Consensus 231 -~p~~~s----~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 231 -LPKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -CCCCCC----HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 111222 357789999999999999999999885
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-47 Score=413.80 Aligned_cols=246 Identities=26% Similarity=0.346 Sum_probs=194.8
Q ss_pred HHhhccccccCceEEEEEEEC----CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~----~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
|.+.+.||+|+||+||+|+.. .++.||||+++... ......+.+|+++|++++|||||++++++.+++..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 556789999999999999863 47889999997542 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
|||++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 106 Ey~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 106 DFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 9999999999995 345689999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+ +... +..+..
T Consensus 179 ~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~----i~~~~~------ 243 (304)
T 3ubd_A 179 HE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----TMTM----ILKAKL------ 243 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHCCC------
T ss_pred CC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----HHHH----HHcCCC------
Confidence 32 22345679999999999999999999999999999999999999998654221 1111 111211
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
.+....+ .++.+|+.+|++.||++||| ++|+++|
T Consensus 244 ~~p~~~s----~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 GMPQFLS----PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CCCTTSC----HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CCCCcCC----HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1111222 35789999999999999998 4677664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-45 Score=397.82 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=186.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-ccHHHHHHHHHHHccCCCCceeeEeeeeeecC----------
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---------- 595 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~---------- 595 (854)
|.+.+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++...+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 445689999999999999976 689999999975433 33467899999999999999999999987554
Q ss_pred --eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 003039 596 --RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 596 --~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DF 673 (854)
..++|||||++|+|.+++.... .....++..++.++.||+.||+|||++ +|+||||||+||||+.++.+||+||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 3689999999999999996432 222345666788999999999999998 9999999999999999999999999
Q ss_pred eccccccCCCCc-----------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch
Q 003039 674 GLSKFAVDGASH-----------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 742 (854)
Q Consensus 674 Gla~~~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l 742 (854)
|+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||.... ..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------~~ 233 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ER 233 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------HH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------HH
Confidence 999865443211 1234579999999999999999999999999999999996 665322 11
Q ss_pred HHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ........... .......+.+++.+|++.||++|||+.|+++|
T Consensus 234 ~~~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111 11112211111 11222346789999999999999999999875
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.9e-43 Score=385.82 Aligned_cols=273 Identities=42% Similarity=0.744 Sum_probs=239.9
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
.+.+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 121 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121 (321)
T ss_dssp SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence 34678999999999999988899999999877666667789999999999999999999999999999999999999999
Q ss_pred HHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC-CCcee
Q 003039 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG-ASHVS 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~-~~~~~ 687 (854)
|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 122 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp TGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 9999976544455689999999999999999999998 9999999999999999999999999999754332 22223
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcC
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||.... +.....+..|.......+.+...+++.+....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS-SSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC-cHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 44568999999999999999999999999999999999999997654 33344677777777777888888898888888
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+....+.+++.+|++.+|++|||+.||+++|+.++.
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 88899999999999999999999999999999999865
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-43 Score=389.37 Aligned_cols=288 Identities=35% Similarity=0.657 Sum_probs=248.5
Q ss_pred cccCHHHHHHHHH--HhhccccccCceEEEEEEECCCcEEEEEEEccCCc-ccHHHHHHHHHHHccCCCCceeeEeeeee
Q 003039 516 HCFTLSDIEDATK--MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 516 ~~~~~~~~~~~~~--~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~ 592 (854)
..++..++..... .+.+.||+|+||.||+|+.++++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 3456666665443 34688999999999999988899999999875532 23447899999999999999999999999
Q ss_pred ecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 003039 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 593 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~D 672 (854)
..+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999977655566799999999999999999999998777999999999999999999999999
Q ss_pred eeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-cccccchHHHHHHhhh
Q 003039 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-GANCRNIVQWAKLHIE 751 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~-~~~~~~l~~~~~~~~~ 751 (854)
||+++..............||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+..|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 999987655555555566799999999999999999999999999999999999999975442 2334467788888888
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
...+..+.+..+...+..+....+.+++.+|++.+|++|||+.||+++|+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 8888888999888888999999999999999999999999999999999874
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=394.91 Aligned_cols=259 Identities=20% Similarity=0.309 Sum_probs=197.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeee------cCeEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~------~~~~~ 598 (854)
|.+.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..+
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 456789999999999999886 69999999997543 2334568899999999999999999998754 36789
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+|||||+ |+|.+++. ..+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 136 ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 136 VVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 9999996 68998884 345789999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCC---CceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 679 AVDGA---SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 679 ~~~~~---~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+....+... .....
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~----~g~p~ 283 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV----LGTPS 283 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHH----HCCCC
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHh----cCCCC
Confidence 54321 2233456899999999998875 5689999999999999999999999765422211111111 00000
Q ss_pred cccccCc-----------ccc--CcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDP-----------SLL--DEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~-----------~l~--~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.... .+. ...+. .....+.+|+.+|++.||++|||+.|+++|
T Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 284 -PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000 000 00000 112357899999999999999999999886
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-42 Score=408.56 Aligned_cols=250 Identities=23% Similarity=0.368 Sum_probs=207.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
|.+.+.||+|+||+||+|+.+ +|+.||||++..........+.+|+++|+.++||||+++++++.+.+..++|||||++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g 238 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 456789999999999999886 6899999999876655667889999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC--CcEEEEeeeccccccCCCC
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--MRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~--~~vkl~DFGla~~~~~~~~ 684 (854)
|+|.++|.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 239 g~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 239 GELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999998853 245689999999999999999999998 99999999999999854 89999999999876543
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... .+.. .+..+.. .+++...
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~----~~~~----~i~~~~~--~~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD----ETLR----NVKSCDW--NMDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHH----HHHTTCC--CCCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHH----HHHhCCC--CCCcccc
Confidence 2334567999999999999999999999999999999999999999765421 1111 1111111 0111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ..+.+|+.+||+.||++|||+.|+++|
T Consensus 381 ~~~s----~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 SGIS----EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2222 347799999999999999999999986
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.6e-42 Score=383.41 Aligned_cols=194 Identities=25% Similarity=0.376 Sum_probs=165.6
Q ss_pred HHhhccccccCceEEEEEEEC----CCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~----~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
|.+.++||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|+.+ +||||+++++++.+.++.++|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 456789999999999999764 46789999986543 345678999999988 69999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC-CcEEEEeeeccccccC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVD 681 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkl~DFGla~~~~~ 681 (854)
|+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 101 ~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 101 YLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp CCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred CCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999883 378888999999999999999998 99999999999999877 7999999999975443
Q ss_pred CCC---------------------------ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccc
Q 003039 682 GAS---------------------------HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 682 ~~~---------------------------~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~ 733 (854)
... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 211 112335799999999999875 5899999999999999999999999543
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-41 Score=398.85 Aligned_cols=246 Identities=24% Similarity=0.326 Sum_probs=196.6
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHH---HHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFT---NEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~---~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
.+.+.||+|+||+||+|+.+ +|+.||||++.+.. ......+. .++++++.++|||||++++++.+.+.+++||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVm 271 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEE
Confidence 34578999999999999987 68999999996432 11222233 3467778889999999999999999999999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
|||+||+|.++|. ....+++..+..++.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+....
T Consensus 272 Ey~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 272 DLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999995 345789999999999999999999998 999999999999999999999999999986644
Q ss_pred CCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 682 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.. ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||........ ..+.. . ......
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~---~-i~~~~~----- 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDR---M-TLTMAV----- 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHH---H-HHHCCC-----
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH---h-hcCCCC-----
Confidence 32 344679999999999975 5799999999999999999999999976542211 11111 1 111111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
.+...++ .++.+|+.+|++.||++|++ ++||.+|
T Consensus 412 -~~p~~~S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 -ELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -CCCTTSC----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -CCCccCC----HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1112222 35789999999999999998 7888876
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.9e-41 Score=364.50 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=208.7
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
.+.+.||+|+||+||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 92 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCC
Confidence 45689999999999999986 58999999987666666788999999999999999999999999999999999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce-
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV- 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~- 686 (854)
+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 93 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 93 TLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp BHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999642 45689999999999999999999998 99999999999999999999999999998654332211
Q ss_pred ------------eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc--ccchHHHHHHhhhc
Q 003039 687 ------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN--CRNIVQWAKLHIES 752 (854)
Q Consensus 687 ------------~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~--~~~l~~~~~~~~~~ 752 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++|..|+........ ...........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--- 243 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY--- 243 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT---
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc---
Confidence 1145699999999999999999999999999999999999999865432111 11111111111
Q ss_pred CCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 753 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 753 ~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.... ....+.+++.+|++.+|++|||+.||++.|+.+...
T Consensus 244 ----------~~~~----~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 ----------CPPN----CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp ----------CCTT----CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0111 113478899999999999999999999999988654
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.2e-40 Score=361.29 Aligned_cols=258 Identities=31% Similarity=0.484 Sum_probs=200.4
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.+.||+|+||+||+|+.. ++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 38 ~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 116 (309)
T 3p86_A 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL 116 (309)
T ss_dssp GEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECC
T ss_pred HceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecC
Confidence 3456789999999999999885 89999999976532 33457889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 117 ~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 117 SRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp TTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 9999999996431 233588999999999999999999998 7 999999999999999999999999999754332
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+....... .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----~~~~~~~~~~~~~--------~ 259 (309)
T 3p86_A 193 F-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVGFKCKRL--------E 259 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHHHSCCCC--------C
T ss_pred c-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCC--------C
Confidence 1 2233456999999999999999999999999999999999999999765411 1222111111100 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+.... ...+.+++.+|++.+|++|||+.||++.|+.++..
T Consensus 260 ~~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 260 IPRNL----NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11122 23588999999999999999999999999998754
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-39 Score=352.43 Aligned_cols=281 Identities=35% Similarity=0.585 Sum_probs=227.0
Q ss_pred ccccCHHHHHHHHHHhh--------ccccccCceEEEEEEECCCcEEEEEEEccCC----cccHHHHHHHHHHHccCCCC
Q 003039 515 AHCFTLSDIEDATKMLE--------KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHR 582 (854)
Q Consensus 515 ~~~~~~~~~~~~~~~~~--------~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~----~~~~~~~~~Ev~~L~~l~Hp 582 (854)
.+.|++.++...+..+. +.||+|+||.||+|.. +++.||||++.... ......+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 35678889988888774 5699999999999987 48999999986532 23356789999999999999
Q ss_pred ceeeEeeeeeecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE
Q 003039 583 NLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 583 nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl 662 (854)
||+++++++...+..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998643 2345689999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccc
Q 003039 663 DKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 741 (854)
Q Consensus 663 ~~~~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~ 741 (854)
+.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||++|+.||...........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 99999999999999765443222 2334569999999998764 588999999999999999999999987653333222
Q ss_pred hHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+..... .....+.+.+++.+ ..........+.+++.+|++.+|++||++.||+++|+++.
T Consensus 246 ~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIE--DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHH--TTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhh--hhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 222111 11222344455444 3345667788999999999999999999999999999864
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.4e-40 Score=372.17 Aligned_cols=260 Identities=23% Similarity=0.437 Sum_probs=209.9
Q ss_pred HHhhccccccCceEEEEEEEC--------CCcEEEEEEEccCCc-ccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~--------~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~ 597 (854)
+.+.+.||+|+||.||+|++. ++..||||+++.... .....+.+|+++++++ +||||++++++|...+..
T Consensus 83 ~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 162 (370)
T 2psq_A 83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 162 (370)
T ss_dssp EEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSC
T ss_pred CEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCE
Confidence 446789999999999999863 356799999976532 3346789999999999 899999999999999999
Q ss_pred EEEEEeccCCCHHhhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC
Q 003039 598 VLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 598 ~LV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.+
T Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 239 (370)
T ss_dssp EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCC
Confidence 999999999999999965321 234588999999999999999999998 99999999999999999
Q ss_pred CcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchH
Q 003039 666 MRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----~~~ 315 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELF 315 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHH
Confidence 99999999999865443221 2233457889999999999999999999999999999999 99999765422 222
Q ss_pred HHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 744 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.. +..+... ..+......+.+++.+|++.+|++||++.||+++|++++...
T Consensus 316 ~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 316 KL----LKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HH----HHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HH----HhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 22 1122111 111122346889999999999999999999999999987654
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6e-40 Score=355.71 Aligned_cols=248 Identities=24% Similarity=0.339 Sum_probs=203.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
|.+.+.||+|+||+||+|... +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 101 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence 345678999999999999864 6899999999766656677889999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 102 ~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 102 GSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 999999853 3578889999999999999999998 999999999999999999999999999976544332 2
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .........+.. ....
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~-~~~~------ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTP-ELQN------ 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCSC-CCSC------
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCC-CCCC------
Confidence 33456999999999999999999999999999999999999999754411 111111111110 0000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+......+.+++.+|++.||++|||+.|++++
T Consensus 239 -~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 239 -PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11122357899999999999999999999986
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=370.07 Aligned_cols=258 Identities=26% Similarity=0.458 Sum_probs=207.1
Q ss_pred HHHHHhhccccccCceEEEEEEEC----CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 525 DATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~a~~~----~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
...+.+.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 344556789999999999999985 34569999997653 3345679999999999999999999999999999999
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999853 234689999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+... +..+..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~----~~~~~~- 272 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVISS----VEEGYR- 272 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHHHH----HHTTCC-
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHHHH----HHcCCC-
Confidence 443222 2233346788999999999999999999999999999999 99999765421 12221 111110
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+......+.+++..|++.+|++||++.||++.|+.++.
T Consensus 273 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 273 --------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01111223468899999999999999999999999999865
No 28
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-40 Score=355.11 Aligned_cols=254 Identities=28% Similarity=0.487 Sum_probs=208.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.+.||+|+||.||+|++.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 34568999999999999999889999999997553 33567999999999999999999999999999999999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 91 ~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 91 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp BHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999532 34588999999999999999999998 999999999999999999999999999986544322233
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|+.|+|||.+.+..++.++||||+||++|||++ |+.||...... .+... +..+. ....+ ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~----~~~~~----~~~~~--~~~~~---~~ 231 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVED----ISTGF--RLYKP---RL 231 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHTTC--CCCCC---TT
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH----HHHHH----HhcCc--cCCCC---Cc
Confidence 34457888999999999999999999999999999999 99999764421 11111 11110 00111 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....+.+++.+|++.+|++||++.|++++|+++..
T Consensus 232 ----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 232 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 12357899999999999999999999999999754
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3e-39 Score=354.25 Aligned_cols=260 Identities=23% Similarity=0.366 Sum_probs=211.2
Q ss_pred cccCHHHHHHHHHH------------hhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCC
Q 003039 516 HCFTLSDIEDATKM------------LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR 582 (854)
Q Consensus 516 ~~~~~~~~~~~~~~------------~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hp 582 (854)
..++..++..++.. ..++||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777776653 2457999999999999987 6999999999876666677899999999999999
Q ss_pred ceeeEeeeeeecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE
Q 003039 583 NLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 583 nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl 662 (854)
||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999998842 3589999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch
Q 003039 663 DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 742 (854)
Q Consensus 663 ~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l 742 (854)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----~~ 249 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----QA 249 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HH
T ss_pred CCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HH
Confidence 9999999999999976543322 223456999999999999999999999999999999999999999754311 11
Q ss_pred HHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... +..... +.+.. .......+.+++.+|++.+|++|||+.|++++
T Consensus 250 ~~~----~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKR----LRDSPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHH----HHHSSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHH----HhcCCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 111111 11111 01112357899999999999999999999986
No 30
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=367.46 Aligned_cols=247 Identities=21% Similarity=0.340 Sum_probs=193.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~ 91 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 445789999999999999875 68999999997553 2334578899999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 92 gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 92 GGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp TCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 9999999843 45689999999999999999999998 9999999999999999999999999998765544444
Q ss_pred eeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 686 VSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..+ +.++||||+||++|||++|..||...... .+. . .+..+... +.
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----~~~---~-~i~~~~~~------~p 230 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM----ALY---K-KIMRGKYD------VP 230 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHH---H-HHHHTCCC------CC
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHH---H-HHHcCCCC------CC
Confidence 4455679999999999988775 88999999999999999999999765421 111 1 11122111 11
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ..+.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~s----~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 KWLS----PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCC----HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1122 346789999999999999999999986
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.5e-41 Score=374.74 Aligned_cols=257 Identities=25% Similarity=0.446 Sum_probs=197.2
Q ss_pred HHHhhccccccCceEEEEEEEC----CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~----~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
.+.+.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 3456789999999999999875 56789999997543 334567999999999999999999999999999999999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 126 e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 126 EYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp ECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred eCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999963 234688999999999999999999998 999999999999999999999999999986544
Q ss_pred CCCce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003039 682 GASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
..... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+... +..+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----~~~~~----i~~~~---- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKA----VDEGY---- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH----HHHHH----HHTTE----
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCC----
Confidence 32221 122335788999999999999999999999999999998 99999754411 12221 11110
Q ss_pred cCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
....+......+.+++.+|++.+|++||+|.||++.|++++..
T Consensus 268 -----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 -----RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0111112335688999999999999999999999999998653
No 32
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.1e-40 Score=353.02 Aligned_cols=255 Identities=29% Similarity=0.465 Sum_probs=209.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.+.||+|+||.||+|+++++..||||+++.... ...++.+|++++++++||||+++++++...+..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCC
Confidence 445789999999999999999888999999975543 3567899999999999999999999999999999999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 89 CLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp BHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred cHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999532 34588999999999999999999998 999999999999999999999999999986655443334
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... ....+.. ...+. .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~----~~~~~~~--~~~~~---~ 229 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS----EVVL----KVSQGHR--LYRPH---L 229 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHH----HHHTTCC--CCCCT---T
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH----HHHH----HHHcCCC--CCCCC---c
Confidence 44557788999999999899999999999999999999 99999754421 1111 1111110 01111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. ...+.+++..|++.+|++|||+.||+++|+.+...
T Consensus 230 ~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 A----SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp S----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred C----hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 1 23588999999999999999999999999987543
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.5e-40 Score=355.37 Aligned_cols=256 Identities=29% Similarity=0.478 Sum_probs=206.9
Q ss_pred HHHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
.+.+.+.||+|+||.||+|++.++..||||+++.... ..+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 103 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence 3456789999999999999999888999999975543 356789999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 104 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 104 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred CcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999642 34689999999999999999999998 99999999999999999999999999998654432222
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccC
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .... .+..+.. ... ..
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~----~~~~----~~~~~~~--~~~---~~ 244 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS----ETAE----HIAQGLR--LYR---PH 244 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHH----HHHTTCC--CCC---CT
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh----HHHH----HHhcccC--CCC---CC
Confidence 333457788999999998899999999999999999998 99999764421 1111 1111100 000 11
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.. ...+.+++.+|++.+|++|||+.|++++|++++..
T Consensus 245 ~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 245 LA----SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11 23588999999999999999999999999998753
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.8e-40 Score=361.48 Aligned_cols=266 Identities=27% Similarity=0.351 Sum_probs=205.4
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecC----eEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~----~~~LV~E~ 603 (854)
+.+.++||+|+||+||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ..++||||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred chhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 445789999999999999987 8999999996543 23445677999999999999999999998754 36999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-------CCceecCCCCCCCEEEcCCCcEEEEeeecc
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-------VPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivHrDIkp~NILl~~~~~vkl~DFGla 676 (854)
+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 104 ~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 104 HEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp CTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999953 34899999999999999999999852 238999999999999999999999999999
Q ss_pred ccccCCCCc-eeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccc---------cc
Q 003039 677 KFAVDGASH-VSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC---------RN 741 (854)
Q Consensus 677 ~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~-----~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~---------~~ 741 (854)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 765443322 2233569999999999986 45667899999999999999999999754321110 01
Q ss_pred hHHHHHHhhhcCCcccccCccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 742 IVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+...... ... .+.+... ........+.+++.+|++.||++|||+.||++.|+++..
T Consensus 259 ~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVH-KKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTT-SCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhc-ccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 111 1111111 123455679999999999999999999999999999754
No 35
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.2e-40 Score=371.65 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=206.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|++. +++.||||+++.... .....+.+|+++|++++||||+++++++...+..++||||++
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 195 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 195 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence 345789999999999999987 689999999875432 234568899999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 196 ~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 196 GGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp TCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999963 244688999999999999999999998 9999999999999999999999999999754332111
Q ss_pred ee-ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 686 VS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 686 ~~-~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.. ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.. .+..+....
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~~~----~~~~~~~~~------ 335 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QTRE----FVEKGGRLP------ 335 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HHHH----HHHTTCCCC------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCCCC------
Confidence 11 12235778999999999999999999999999999998 99999765411 1111 222221100
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+......+.+++.+|++.+|++|||+.+|++.|+++..
T Consensus 336 ---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 336 ---CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 111123457899999999999999999999999999764
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.9e-40 Score=361.51 Aligned_cols=245 Identities=24% Similarity=0.402 Sum_probs=201.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 445689999999999999984 79999999997542 233566889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 97 SGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 99999999853 35688999999999999999999998 99999999999999999999999999997654332
Q ss_pred ceeecccccccccCccccccCcCC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s-~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||...... .+.. .+..+... +
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~----~i~~~~~~------~ 233 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----ELRE----RVLRGKYR------I 233 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCC------C
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH----HHHH----HHHhCCCC------C
Confidence 23445799999999999988775 7899999999999999999999765421 1111 11222111 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.||++|||++|+++|
T Consensus 234 p~~----~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 PFY----MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CTT----SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCC----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111 12357789999999999999999999886
No 37
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-40 Score=359.60 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=204.7
Q ss_pred HHHhhccccccCceEEEEEEEC-----CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeee--cCeEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-----~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~--~~~~~L 599 (854)
.+.+.+.||+|+||+||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 3456789999999999999852 588999999987666666789999999999999999999999854 356899
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 91 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999643 34588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc--------ccccchHHHHHHh
Q 003039 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKLH 749 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~--------~~~~~l~~~~~~~ 749 (854)
...... ......+|..|+|||.+.+..++.++|||||||++|||++|..|+...... .............
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 443221 223345778899999999999999999999999999999999988643210 0000111112222
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+..+.. ...+......+.+++.+|++.+|++|||+.||++.|+++..
T Consensus 245 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 245 LKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 222111 11112223468899999999999999999999999999754
No 38
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=349.10 Aligned_cols=271 Identities=21% Similarity=0.287 Sum_probs=211.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecC--eEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~--~~~LV~E~ 603 (854)
|.+.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 345689999999999999987 48999999997543 234567889999999999999999999997655 77999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE----cCCCcEEEEeeeccccc
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~vkl~DFGla~~~ 679 (854)
+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999996532 223489999999999999999999998 99999999999999 78889999999999865
Q ss_pred cCCCCceeecccccccccCccccc--------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYI--------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
..... .....||+.|+|||++. +..++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 44322 23356999999999986 577899999999999999999999999754433222222222221111
Q ss_pred cCCcccc---------cCccc--cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 752 SGDIQGI---------IDPSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 752 ~~~~~~~---------id~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
......+ .++.+ ...........+.+++.+|++.||++|||++|++++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1111110 00111 12345667778899999999999999999999999988754
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8e-40 Score=354.15 Aligned_cols=258 Identities=24% Similarity=0.384 Sum_probs=202.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 92 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeC
Confidence 456789999999999999876 689999999865432 2346788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 93 ~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 93 IEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 999999999853 34688999999999999999999998 99999999999999999999999999998665443
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .......... ... .....
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~-~~~-~~~~~ 236 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDS-VPN-VTTDV 236 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSC-CCC-HHHHS
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhcc-CCC-cchhc
Confidence 33344567999999999999999999999999999999999999999765411 1111111111 110 00111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 805 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~ 805 (854)
... ....+.+++.+|++.+|++|| ++.++.+.|+.++.
T Consensus 237 ~~~----~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 237 RKD----IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp CTT----SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred ccC----CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 112 234688999999999999999 89999999987653
No 40
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-39 Score=355.58 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=208.8
Q ss_pred HHhhccccccCceEEEEEEEC------CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
+.+.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 104 (314)
T 2ivs_A 25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104 (314)
T ss_dssp EEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEE
Confidence 446789999999999999862 45789999997543 33456788999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhccccc--------------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCE
Q 003039 601 YEFMHNGTLKEHLYGTLT--------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
|||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NI 181 (314)
T 2ivs_A 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI 181 (314)
T ss_dssp EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheE
Confidence 999999999999965322 124588999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccccc
Q 003039 661 LLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGAN 738 (854)
Q Consensus 661 Ll~~~~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~ 738 (854)
|++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-- 259 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-- 259 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 9999999999999999865443322 2233457889999999999999999999999999999999 99999765421
Q ss_pred ccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+.... ..+... ..... ....+.+++.+|++.+|++||++.||+++|++++.
T Consensus 260 --~~~~~~----~~~~~~-----~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 260 --RLFNLL----KTGHRM-----ERPDN----CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp --GHHHHH----HTTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHh----hcCCcC-----CCCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 222221 111111 11112 22458899999999999999999999999999865
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.1e-39 Score=361.11 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=203.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc------cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~------~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
|.+.+.||+|+||.||+|+.+ +|+.||||+++..... ....+.+|+.+|++++||||+++++++...+..++|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 456789999999999999987 5899999999754322 346789999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeeecc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFGLS 676 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~vkl~DFGla 676 (854)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 94 ~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 94 LELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999843 45689999999999999999999998 999999999999998877 7999999999
Q ss_pred ccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 677 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... .+.. .+..+..
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~----~~~~----~i~~~~~- 235 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLA----NITAVSY- 235 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHH----HHHTTCC-
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----HHHhcCC-
Confidence 8654432 223456999999999999999999999999999999999999999765421 1111 1111111
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+++...... ...+.+++.+|+..||++|||+.|+++|
T Consensus 236 -~~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 -DFDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -CCCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCCchhccCC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111111122 2357899999999999999999999975
No 42
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.1e-40 Score=366.20 Aligned_cols=262 Identities=27% Similarity=0.413 Sum_probs=207.4
Q ss_pred HHHHhhccccccCceEEEEEEEC------CCcEEEEEEEccCCc-ccHHHHHHHHHHHccC-CCCceeeEeeeeeecC-e
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG-R 596 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~-~ 596 (854)
..+.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++.++ +||||+++++++...+ .
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 34556789999999999999742 467899999976533 3346789999999999 7999999999998755 4
Q ss_pred EEEEEEeccCCCHHhhhcccccc---------------------------------------------------------
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLTH--------------------------------------------------------- 619 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~~--------------------------------------------------------- 619 (854)
.++||||+++|+|.+++......
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 89999999999999999654211
Q ss_pred -----cccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC-ceeeccccc
Q 003039 620 -----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGT 693 (854)
Q Consensus 620 -----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~-~~~~~~~gt 693 (854)
...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......||
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 11288999999999999999999998 999999999999999999999999999986543322 233445689
Q ss_pred ccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHH
Q 003039 694 VGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSM 772 (854)
Q Consensus 694 ~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~ 772 (854)
+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .+. ..+..+.... ..... .
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~----~~~~~~~~~~-----~~~~~----~ 322 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFC----RRLKEGTRMR-----APDYT----T 322 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HHH----HHHHHTCCCC-----CCTTC----C
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH---HHH----HHHHcCCCCC-----CCCCC----C
Confidence 99999999999999999999999999999998 999997654221 111 1122221111 11112 2
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 773 WKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 773 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+.+++..|++.+|++||||.||+++|++++..
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999998754
No 43
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=354.86 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=203.5
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc------cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~------~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34667889999999999999986 5899999998754321 3567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeee
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 674 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~vkl~DFG 674 (854)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999843 45689999999999999999999998 999999999999999887 89999999
Q ss_pred ccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ....
T Consensus 164 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~~----~~~~ 233 (326)
T 2y0a_A 164 LAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLANV----SAVN 233 (326)
T ss_dssp TCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHH----HHTC
T ss_pred CCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHH----HhcC
Confidence 998654322 223456999999999999999999999999999999999999999754421 111111 1111
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. ......... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 234 ~~--~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 YE--FEDEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC--CCHHHHTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC--cCccccccC----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 000111111 2357899999999999999999999986
No 44
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.7e-39 Score=348.27 Aligned_cols=257 Identities=22% Similarity=0.364 Sum_probs=198.0
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHcc--CCCCceeeEeeeeee----cCeEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQE----EGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~--l~HpnIv~l~g~~~~----~~~~~LV~ 601 (854)
+.+.+.||+|+||+||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++.. ....++||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 44578999999999999998 4899999998643 34455566666655 799999999998754 34579999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH--------hCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDIkp~NILl~~~~~vkl~DF 673 (854)
||+++|+|.+++. ...+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 86 e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 86 HYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp CCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999994 346889999999999999999999 66 9999999999999999999999999
Q ss_pred eccccccCCCCce---eecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC----------Cccccccc
Q 003039 674 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 734 (854)
Q Consensus 674 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~~DVwSlGvvl~elltG----------~~pf~~~~ 734 (854)
|+++......... .....||+.|+|||.+.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997655443322 2234699999999999876 556799999999999999999 77775433
Q ss_pred ccccccchHHHHHHhhhcCCcccccCcccc-CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 735 FGANCRNIVQWAKLHIESGDIQGIIDPSLL-DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 735 ~~~~~~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.... ............+. .+.+. ..........+.+++.+|++.+|++|||+.||++.|+++
T Consensus 238 ~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDP--SFEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSC--CHHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCc--chhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2111 11111111111111 11111 112334567899999999999999999999999999875
No 45
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.9e-39 Score=356.54 Aligned_cols=245 Identities=24% Similarity=0.334 Sum_probs=201.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccC---CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~---~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||||+++.. .......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~ 87 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 45688999999999999886 6899999999753 2233566889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 88 ~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~ 159 (337)
T 1o6l_A 88 NGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-G 159 (337)
T ss_dssp TTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-T
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC-C
Confidence 9999999884 345688999999999999999999998 9999999999999999999999999999753322 2
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. ... .+.. .+.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~---~i~-~~~~------~~p 225 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFE---LIL-MEEI------RFP 225 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH---HHH-HCCC------CCC
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----HHHH---HHH-cCCC------CCC
Confidence 2334557999999999999999999999999999999999999999754421 1111 111 1111 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
... ...+.+++.+|++.+|++|| +++||++|
T Consensus 226 ~~~----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112 23578999999999999999 89999887
No 46
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.2e-40 Score=376.56 Aligned_cols=253 Identities=24% Similarity=0.397 Sum_probs=206.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++. .+..++||||+++|
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g 267 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKG 267 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred eEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence 44678999999999999999888999999997644 34678999999999999999999999987 56789999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 268 ~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 268 SLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp BHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred cHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 999999643 234578889999999999999999998 999999999999999999999999999986543222222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|..|+|||.+....++.++|||||||++|||++ |+.||...... .+...+ ..+... .
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i----~~~~~~---------~ 405 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRAL----ERGYRM---------P 405 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHH----HHTCCC---------C
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCCC---------C
Confidence 33446789999999999999999999999999999999 99999765421 222211 111100 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.+|++||||.+|++.|+.+.
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 11122346889999999999999999999999999864
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=365.75 Aligned_cols=260 Identities=25% Similarity=0.432 Sum_probs=210.3
Q ss_pred HHHhhccccccCceEEEEEEEC--------CCcEEEEEEEccCC-cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCe
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~--------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~ 596 (854)
.+.+.+.||+|+||.||+|+.. .+..||||+++... ......+.+|+++++++ +||||+++++++...+.
T Consensus 70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 149 (382)
T 3tt0_A 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 149 (382)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc
Confidence 4556789999999999999863 24579999997653 23346788999999999 99999999999999999
Q ss_pred EEEEEEeccCCCHHhhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE 226 (382)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcC
Confidence 9999999999999999965421 134589999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeeeccccccCCCC-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccch
Q 003039 665 HMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 742 (854)
Q Consensus 665 ~~~vkl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l 742 (854)
++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .+
T Consensus 227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~----~~ 302 (382)
T 3tt0_A 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----EL 302 (382)
T ss_dssp TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HH
T ss_pred CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HH
Confidence 99999999999986544322 22333457899999999999999999999999999999999 99999765421 22
Q ss_pred HHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.. .+..+.... .... ....+.+++.+|++.+|++||++.||+++|++++..
T Consensus 303 ~~----~~~~~~~~~-----~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 303 FK----LLKEGHRMD-----KPSN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp HH----HHHTTCCCC-----CCSS----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH----HHHcCCCCC-----CCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22 122221111 1111 224588999999999999999999999999998754
No 48
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.5e-39 Score=349.28 Aligned_cols=257 Identities=21% Similarity=0.340 Sum_probs=195.6
Q ss_pred HHHhhccccccCceEEEEEEECC----CcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~----~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
.+.+.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 94 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM 94 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEE
Confidence 34567899999999999998753 4579999987543 334567889999999999999999999985 45689999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 95 ELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp ECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999998532 34588999999999999999999998 999999999999999999999999999986654
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
..........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+...+ ..+....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~~i----~~~~~~~--- 237 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRI----ENGERLP--- 237 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH----HTTCCCC---
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHHHH----HcCCCCC---
Confidence 43333344457889999999998899999999999999999997 99999765422 222221 1111110
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
+... ....+.+++.+|++.+|++||++.||+++|++++..+
T Consensus 238 --~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 238 --MPPN----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp --CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1112 2345789999999999999999999999999987654
No 49
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=8e-39 Score=355.36 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=205.1
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-----cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEE
Q 003039 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-----~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
...|.+.+.||+|+||.||+|..+ +++.||||++.... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 345677899999999999999876 68999999986321 224577899999999999999999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeeec
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGL 675 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---vkl~DFGl 675 (854)
+||||+++|+|.+.+.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865433445688999999999999999999998 9999999999999987655 99999999
Q ss_pred cccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003039 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.. .+..+..
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~----~i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-----ERLFE----GIIKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-----HHHHH----HHHHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-----HHHHH----HHHcCCC
Confidence 98654432 22334569999999999999999999999999999999999999997643 11111 1111111
Q ss_pred ccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .++...... ...+.+++.+|++.||++|||+.|+++|
T Consensus 250 ~--~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 111111112 2457899999999999999999999875
No 50
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.4e-39 Score=352.16 Aligned_cols=260 Identities=21% Similarity=0.278 Sum_probs=198.2
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
|.+.++||+|+||+||+|+..+++.||||++..... .....+.+|++++++++||||+++++++..++..++||||++
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 102 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence 345689999999999999998899999999875432 224678899999999999999999999999999999999998
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+ +|.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 103 ~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 103 K-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp E-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred C-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 5 78777753 234588999999999999999999998 999999999999999999999999999986543322
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc---c-----
Q 003039 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI---Q----- 756 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~---~----- 756 (854)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.. ....... .
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS----ILGTPNPREWPQVQEL 250 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH----HHCCCCTTTSGGGTTS
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH----HHCCCChHHhhhhhcc
Confidence 2233468999999999876 5689999999999999999999999976543222212111 1111000 0
Q ss_pred --------cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 --------GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 --------~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.............++.+++.+|++.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000000001112457899999999999999999999875
No 51
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.3e-39 Score=378.29 Aligned_cols=254 Identities=28% Similarity=0.427 Sum_probs=209.7
Q ss_pred HHhhccccccCceEEEEEEECC-CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~-~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
+.+.++||+|+||.||+|+++. +..||||+++... ...+.|.+|+++|++++||||++++++|...+..++||||+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 4467899999999999999874 8899999997543 3467899999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 301 g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 301 GNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp CBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 9999999643 234588999999999999999999998 99999999999999999999999999998664433223
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccC
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+|..|+|||.+....++.++|||||||++|||++ |+.||...... .+...+ ..+. ..
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~~----~~~~---------~~ 438 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELL----EKDY---------RM 438 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHH----HTTC---------CC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCC---------CC
Confidence 333456789999999999999999999999999999999 99999765422 222221 1111 01
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
..+......+.+|+.+|++.+|++||||.||++.|+.++
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111122346889999999999999999999999999875
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=365.59 Aligned_cols=260 Identities=26% Similarity=0.404 Sum_probs=207.2
Q ss_pred HHHhhccccccCceEEEEEEEC------CCcEEEEEEEccC-CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~-~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
.+.+.+.||+|+||+||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..++
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 3456789999999999999854 4678999999754 33445678899999999999999999999999999999
Q ss_pred EEEeccCCCHHhhhcccc---cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEEEEee
Q 003039 600 VYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDF 673 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkl~DF 673 (854)
||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCC
Confidence 999999999999996543 2234689999999999999999999998 999999999999999555 5999999
Q ss_pred eccccccCC-CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003039 674 GLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++..... .........||+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+... +.
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~----~~~~~----i~ 300 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEF----VT 300 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHH----HH
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HH
Confidence 999744221 1122234458999999999999999999999999999999998 99999765411 22221 11
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+.... .+......+.+++.+|++.+|++||++.||+++|+.+...
T Consensus 301 ~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 301 SGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp TTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 111100 1111224588999999999999999999999999987653
No 53
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-39 Score=358.44 Aligned_cols=266 Identities=24% Similarity=0.352 Sum_probs=208.5
Q ss_pred HHHhhccccccCceEEEEEEE-----CCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeee--ecCeEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~-----~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~--~~~~~~L 599 (854)
.+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 345678999999999999985 358899999998766666677999999999999999999999886 4567899
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999998532 34589999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccc-------cccchHHHHHHhh
Q 003039 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA-------NCRNIVQWAKLHI 750 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~-------~~~~l~~~~~~~~ 750 (854)
...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||....... .............
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 543322 2233458889999999999999999999999999999999999986533110 0000111111111
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
..+. ....+......+.+++.+|++.+|++|||+.||+++|+.+....
T Consensus 258 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 258 EEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111 11112223346889999999999999999999999999986543
No 54
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-39 Score=349.49 Aligned_cols=258 Identities=28% Similarity=0.416 Sum_probs=212.9
Q ss_pred HHHhhccccccCceEEEEEEECC-CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~-~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
.+.+.+.||+|+||.||+|.+.. ++.||+|++.... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 92 (288)
T 3kfa_A 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 92 (288)
T ss_dssp GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence 34567899999999999999874 7889999997543 345778999999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 93 ~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 167 (288)
T 3kfa_A 93 YGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167 (288)
T ss_dssp TEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred CCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence 99999999642 235588999999999999999999998 9999999999999999999999999999876554444
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .+...... +. ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~~~~~~~~----~~-----~~--- 231 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEK----DY-----RM--- 231 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHHT----TC-----CC---
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHhc----cC-----CC---
Confidence 4445567889999999999999999999999999999999 99999765422 22222111 10 00
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
..+......+.+++..|++.+|++||++.||++.|+.+....
T Consensus 232 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 -ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111112246889999999999999999999999999987654
No 55
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2e-39 Score=356.44 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=199.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCc----EEEEEEEccC-CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~----~VAvK~l~~~-~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
+.+.+.||+|+||+||+|++. +++ +||+|.++.. .....+.+.+|+.++++++||||++++++|.... .++|+
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEE
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEE
Confidence 445689999999999999875 344 3688887543 2345678999999999999999999999998764 78999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 96 QLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp ECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999998642 35688999999999999999999998 999999999999999999999999999986544
Q ss_pred CCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 682 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.... ..+..
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~----~~~~~---- 237 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSIL----EKGER---- 237 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH----HTTCC----
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----HHHHHH----HcCCC----
Confidence 3322 2233457889999999999999999999999999999999 99999765421 222221 11110
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
...+......+.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 238 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 -----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 011112234688999999999999999999999999988653
No 56
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-39 Score=355.42 Aligned_cols=265 Identities=26% Similarity=0.385 Sum_probs=206.4
Q ss_pred HHHHhhccccccCceEEEEEEEC------CCcEEEEEEEccCC-cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~ 597 (854)
..+.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.+++++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 34556789999999999999862 45689999997542 33456789999999999 899999999999999999
Q ss_pred EEEEEeccCCCHHhhhcccccc-------------------cccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCC
Q 003039 598 VLVYEFMHNGTLKEHLYGTLTH-------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 658 (854)
Q Consensus 598 ~LV~E~~~~gsL~~~L~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~ 658 (854)
++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~ 201 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAAR 201 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGG
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChh
Confidence 9999999999999999653211 13478999999999999999999998 9999999999
Q ss_pred CEEEcCCCcEEEEeeeccccccCCCC-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccc
Q 003039 659 NILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 736 (854)
Q Consensus 659 NILl~~~~~vkl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~ 736 (854)
|||++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 99999999999999999986544332 22334567889999999999999999999999999999998 99999765422
Q ss_pred ccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 003039 737 ANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIERE 809 (854)
Q Consensus 737 ~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~~ 809 (854)
. .+.. .+..+.. . ..+......+.+++.+|++.+|++||++.||+++|+.++...++
T Consensus 282 ~---~~~~----~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 282 A---NFYK----LIQNGFK-----M----DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp H---HHHH----HHHTTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred H---HHHH----HHhcCCC-----C----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 1 1111 1121111 0 01111234688999999999999999999999999998765443
No 57
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.2e-39 Score=346.44 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=196.6
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
.+.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (288)
T 1ob3_A 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence 45678999999999999998899999999965432 2346788999999999999999999999999999999999985
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 85 -~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 85 -DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp -EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred -CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 898888532 35688889999999999999999998 99999999999999999999999999997654322 12
Q ss_pred eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc-----cccC
Q 003039 687 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ-----GIID 760 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~id 760 (854)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+....... ...... ...+
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP-NSKNWPNVTELPKYD 235 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC-CTTTSTTGGGSTTCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCC-Chhhchhhhcccccc
Confidence 233468999999999976 458999999999999999999999997654221111111100000 000000 0011
Q ss_pred cccc-------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 761 PSLL-------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~-------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.+. ..........+.+++.+|++.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110 00111123457899999999999999999999875
No 58
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=352.99 Aligned_cols=249 Identities=18% Similarity=0.300 Sum_probs=202.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 85 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence 345688999999999999887 58899999987443 3456688999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--CCcEEEEeeeccccccCCCC
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~--~~~vkl~DFGla~~~~~~~~ 684 (854)
|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 86 ~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 86 LDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 999999853 234688999999999999999999998 9999999999999997 7899999999998664432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|..||...... .+.. .. ..+... .++...
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~---~i-~~~~~~--~~~~~~ 227 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ----QIIE---NI-MNAEYT--FDEEAF 227 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHH---HH-HHTCCC--CCHHHH
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH----HHHH---HH-HcCCCC--CChhhh
Confidence 234456999999999999988999999999999999999999999765421 1111 11 111110 011111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...+.+++.+|++.||++|||+.|+++|
T Consensus 228 ~~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 KEI----SIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp TTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112 2357899999999999999999999986
No 59
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.6e-39 Score=344.97 Aligned_cols=251 Identities=30% Similarity=0.429 Sum_probs=191.6
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCc----ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY----QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~----~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEEC
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEc
Confidence 345689999999999999986 89999999865432 2246788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--------CCcEEEEeeec
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--------HMRAKVSDFGL 675 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~--------~~~vkl~DFGl 675 (854)
+++++|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+|||++. ++.+||+|||+
T Consensus 88 ~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 88 ARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp CTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999884 346889999999999999999999983223999999999999986 77899999999
Q ss_pred cccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003039 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ... ... .....
T Consensus 163 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~---~~~-~~~~~ 231 (271)
T 3dtc_A 163 AREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----AVA---YGV-AMNKL 231 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----HHH---HHH-HTSCC
T ss_pred cccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHH---Hhh-hcCCC
Confidence 97554322 22346899999999999999999999999999999999999999764411 111 111 11111
Q ss_pred ccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
. ...+......+.+++.+|++.+|++|||+.|++++|+++
T Consensus 232 ~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 A--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1 111112234688999999999999999999999999863
No 60
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-39 Score=344.60 Aligned_cols=254 Identities=28% Similarity=0.485 Sum_probs=207.7
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence 345688999999999999998889999999976543 3567899999999999999999999999999999999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 89 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp BHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999998532 34578999999999999999999998 999999999999999999999999999976543222222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... .+.. .+..+.. ...+ ..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~----~i~~~~~--~~~~---~~ 229 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVE----DISTGFR--LYKP---RL 229 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHH----HHHTTCC--CCCC---TT
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH----HHHH----HHhcCCc--CCCC---cc
Confidence 33457889999999998899999999999999999999 89999764411 1111 1111110 0011 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....+.+++.+|++.+|++||++.|++++|+++..
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 230 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12357899999999999999999999999999754
No 61
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.3e-39 Score=366.81 Aligned_cols=248 Identities=28% Similarity=0.439 Sum_probs=202.8
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecC-eEEEEEEeccCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~-~~~LV~E~~~~g 607 (854)
.+.+.||+|+||.||+|.++ ++.||||+++... ..+.|.+|+++|++++||||+++++++...+ ..++||||+++|
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g 272 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272 (450)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred EEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence 45688999999999999987 7899999997553 4567999999999999999999999987665 789999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 273 ~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 343 (450)
T 1k9a_A 273 SLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----Q 343 (450)
T ss_dssp BHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----c
Confidence 999999643 223468889999999999999999998 9999999999999999999999999999754322 1
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+... .
T Consensus 344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~----i~~~~~~---------~ 406 (450)
T 1k9a_A 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR----VEKGYKM---------D 406 (450)
T ss_dssp ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THHHH----HHTTCCC---------C
T ss_pred cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCCCC---------C
Confidence 22357899999999999999999999999999999998 99999765422 22221 1222110 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+......+.+++.+|++.+|++|||+.||++.|+.+..
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111223468899999999999999999999999998754
No 62
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.6e-39 Score=344.75 Aligned_cols=255 Identities=25% Similarity=0.421 Sum_probs=207.6
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.+.||+|+||.||+|...+++.||||++.... .....+.+|++++++++||||+++++++.. +..++||||++++
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~ 92 (279)
T 1qpc_A 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92 (279)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred hhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCC
Confidence 44678999999999999999888899999997543 346778999999999999999999999874 4689999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 93 ~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 93 SLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp BHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 999999532 233688999999999999999999998 999999999999999999999999999986654433333
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.. ......
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~~~~ 234 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQN----LERGYR-----MVRPDN 234 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCC-----CCCCTT
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----HHHHH----HhcccC-----CCCccc
Confidence 34457889999999998899999999999999999999 99999754421 12111 111110 011111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
....+.+++.+|++.+|++|||+.+|++.|+++...
T Consensus 235 ----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 235 ----CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 224688999999999999999999999999998754
No 63
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.4e-39 Score=371.97 Aligned_cols=253 Identities=25% Similarity=0.431 Sum_probs=201.6
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.++||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++.. +..++||||+++|
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~g 263 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG 263 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCC
Confidence 44678999999999999999988889999997544 345689999999999999999999999876 6789999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 264 sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 264 SLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp BHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 999999632 234588999999999999999999998 999999999999999999999999999986554332233
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|..|+|||.+....++.++|||||||++|||++ |+.||...... .+.. .+..+... .
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~----~i~~~~~~---------~ 401 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLD----QVERGYRM---------P 401 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHH----HHHTTCCC---------C
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCCC---------C
Confidence 34457889999999999999999999999999999999 99999765421 1222 12222110 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.+|++|||+.+|++.|+.+.
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 11122346889999999999999999999999999875
No 64
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=358.89 Aligned_cols=259 Identities=25% Similarity=0.423 Sum_probs=207.3
Q ss_pred HHhhccccccCceEEEEEEEC------CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
+.+.+.||+|+||.||+|+.. +++.||||+++... ......+.+|++++++++||||+++++++...+..++|
T Consensus 49 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 128 (343)
T 1luf_A 49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL 128 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEE
Confidence 445788999999999999875 34789999997653 23356789999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhcccccc--------------------cccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCE
Q 003039 601 YEFMHNGTLKEHLYGTLTH--------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
|||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NI 205 (343)
T 1luf_A 129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNC 205 (343)
T ss_dssp EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceE
Confidence 9999999999999653211 25689999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEeeeccccccCCCC-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccccc
Q 003039 661 LLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGAN 738 (854)
Q Consensus 661 Ll~~~~~vkl~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~ 738 (854)
|++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 206 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-- 283 (343)
T 1luf_A 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-- 283 (343)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--
T ss_pred EECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH--
Confidence 999999999999999975432211 12233458899999999999999999999999999999999 99999754411
Q ss_pred ccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+.. .+..+.... .... ....+.+++.+|++.+|++||++.||+++|+++...
T Consensus 284 --~~~~----~~~~~~~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 284 --EVIY----YVRDGNILA-----CPEN----CPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp --HHHH----HHHTTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred --HHHH----HHhCCCcCC-----CCCC----CCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1111 222222211 1112 224588999999999999999999999999998653
No 65
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=343.85 Aligned_cols=247 Identities=25% Similarity=0.363 Sum_probs=193.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc--------------------------cHHHHHHHHHHHccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------------------------GKREFTNEVTLLSRIH 580 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~--------------------------~~~~~~~Ev~~L~~l~ 580 (854)
|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 446789999999999999876 6889999998654311 1246889999999999
Q ss_pred CCceeeEeeeeee--cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCC
Q 003039 581 HRNLVQFLGYCQE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 658 (854)
Q Consensus 581 HpnIv~l~g~~~~--~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~ 658 (854)
||||+++++++.. .+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 9999999999986 568899999999999987652 34688999999999999999999998 9999999999
Q ss_pred CEEEcCCCcEEEEeeeccccccCCCCceeecccccccccCccccccCc---CCCcchhhhHHHHHHHHHhCCcccccccc
Q 003039 659 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKF 735 (854)
Q Consensus 659 NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~~DVwSlGvvl~elltG~~pf~~~~~ 735 (854)
|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999986544322 233456999999999998655 47789999999999999999999975431
Q ss_pred cccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 736 GANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 736 ~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...+....... + .....+ ..+.+++.+|++.+|++||++.|+++|
T Consensus 246 -------~~~-~~~~~~~~~~~---~-~~~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 -------MCL-HSKIKSQALEF---P-DQPDIA----EDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -------HHH-HHHHHHCCCCC---C-SSSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -------HHH-HHHHhcccCCC---C-CccccC----HHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 111 11111111110 0 011122 357899999999999999999999865
No 66
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.3e-39 Score=352.33 Aligned_cols=258 Identities=18% Similarity=0.227 Sum_probs=205.7
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+|+++++++ +||||+++++++...+..++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence 45688999999999999874 689999999875432 34688999999999 9999999999999999999999999 9
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc-----EEEEeeeccccccC
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAVD 681 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-----vkl~DFGla~~~~~ 681 (854)
++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 89 ~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 89 PSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp CBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9999998642 45789999999999999999999998 9999999999999999887 99999999986544
Q ss_pred CCCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003039 682 GASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 682 ~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......... ...
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~ 241 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-TPI 241 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-SCH
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-CCH
Confidence 3221 123457999999999999999999999999999999999999999865422211111111111110 000
Q ss_pred ccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+.+... .. ++.+++..|++.+|.+||++.+|.+.|+++...
T Consensus 242 -----~~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 242 -----EVLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp -----HHHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----HHHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 000011 11 688999999999999999999999999987653
No 67
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4e-39 Score=352.60 Aligned_cols=263 Identities=25% Similarity=0.375 Sum_probs=206.9
Q ss_pred HhhccccccCceEEEEEEEC-----CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeec--CeEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 600 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-----~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~--~~~~LV 600 (854)
.+.+.||+|+||+||++.++ +++.||||+++... ......+.+|++++++++||||+++++++... ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 56789999999999998753 57899999997653 23456789999999999999999999999874 678999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp ECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999853 3488999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccc-----cccc--hHHHHHHhhh
Q 003039 681 DGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA-----NCRN--IVQWAKLHIE 751 (854)
Q Consensus 681 ~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~-----~~~~--l~~~~~~~~~ 751 (854)
..... ......||..|+|||.+.+..++.++|||||||++|||++|+.||....... .... -.........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 44322 2234458889999999999999999999999999999999999986533110 0000 0001111111
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
.+. ....+......+.+++.+|++.+|++|||+.||++.|+++.....
T Consensus 266 ~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 266 RGE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ccc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 111 111122223468899999999999999999999999999876543
No 68
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=359.83 Aligned_cols=246 Identities=25% Similarity=0.343 Sum_probs=196.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..+++.+ +||||+++++++...+..++|||
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E 104 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEe
Confidence 445789999999999999986 58999999997542 22345677899999988 79999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 105 FVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999999853 45689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.. .+..+.. .
T Consensus 178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~----~i~~~~~------~ 242 (353)
T 3txo_A 178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----LFE----AILNDEV------V 242 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHCCC------C
T ss_pred -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----HHH----HHHcCCC------C
Confidence 223345679999999999999999999999999999999999999997654221 111 1111111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
+... ....+.+++.+|++.+|++||++ .||++|
T Consensus 243 ~p~~----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 243 YPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred CCCC----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0111 22357889999999999999998 788775
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-39 Score=354.65 Aligned_cols=250 Identities=22% Similarity=0.379 Sum_probs=198.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 345689999999999999887 789999999865432 234568899999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC-C
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-S 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~-~ 684 (854)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 89 ~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 89 GGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999884 345689999999999999999999998 99999999999999999999999999997553322 2
Q ss_pred ceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ......|... ... ..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~----~~~---~~~-- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEK----KTY---LNP-- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHHHHTT----CTT---STT--
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHhcc----ccc---CCc--
Confidence 22334579999999999987765 77899999999999999999999764411 1112222111 100 000
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.+|++|||+.|++++
T Consensus 231 ~~~----~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKK----IDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGG----SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccc----CCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 011 12356789999999999999999999876
No 70
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=358.27 Aligned_cols=250 Identities=20% Similarity=0.333 Sum_probs=204.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
|.+.+.||+|+||.||+|... +++.||+|++..........+.+|+++|++++||||+++++++...+..++||||+++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g 132 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence 456789999999999999886 6889999999766555567889999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--CCcEEEEeeeccccccCCCC
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~--~~~vkl~DFGla~~~~~~~~ 684 (854)
|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 133 g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 133 GELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 999998853 234689999999999999999999998 9999999999999974 4789999999998654432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+ ..... ..++...
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i----~~~~~--~~~~~~~ 274 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNV----KRCDW--EFDEDAF 274 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHH----HHCCC--CCCSSTT
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHH----HhCCC--CCCcccc
Confidence 233446999999999999999999999999999999999999999764411 111111 11111 0111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ..+.+++.+|++.||++|||+.|++++
T Consensus 275 ~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSVS----PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccCC----HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 2222 357899999999999999999999986
No 71
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.4e-39 Score=353.57 Aligned_cols=260 Identities=25% Similarity=0.394 Sum_probs=194.7
Q ss_pred HHHhhccccccCceEEEEEEECCC----cEEEEEEEccC--CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeE---
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKDG----KEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS--- 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~~----~~VAvK~l~~~--~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~--- 597 (854)
.+.+.+.||+|+||.||+|++... ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 455678999999999999987643 27999998754 234457789999999999999999999999877655
Q ss_pred ---EEEEEeccCCCHHhhhccccc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 003039 598 ---VLVYEFMHNGTLKEHLYGTLT--HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 598 ---~LV~E~~~~gsL~~~L~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~D 672 (854)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEee
Confidence 999999999999999854321 222588999999999999999999998 999999999999999999999999
Q ss_pred eeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhh
Q 003039 673 FGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.... .
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~---~ 253 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EIYNYL---I 253 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH---H
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HHHHHH---h
Confidence 9999765443221 2233457889999999999999999999999999999999 99999765422 222211 1
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+... ..+......+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 254 -~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 254 -GGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp -TTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -cCCCC---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11100 01111224688999999999999999999999999998753
No 72
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=357.09 Aligned_cols=247 Identities=23% Similarity=0.357 Sum_probs=197.1
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCCCH
Q 003039 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
.+.||+|+||.||+|... +|+.||+|+++.........+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 457999999999999875 6899999999876656677899999999999999999999999999999999999999999
Q ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE--cCCCcEEEEeeeccccccCCCCcee
Q 003039 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--DKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl--~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 998853 234688999999999999999999998 99999999999999 5678999999999986544322 2
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcC
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ . ........ .. +.+......
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~---~~~i~~~~-~~--~~~~~~~~~ 315 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE----T---LNNILACR-WD--LEDEEFQDI 315 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH----H---HHHHHHTC-CC--SCSGGGTTS
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH----H---HHHHHhcc-CC--CChhhhccC
Confidence 33469999999999999999999999999999999999999997654211 1 11111111 00 111111122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..+.+++.+|++.+|++||++.|++++
T Consensus 316 ~----~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 316 S----EEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp C----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C----HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 2 357899999999999999999999985
No 73
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.7e-39 Score=351.13 Aligned_cols=260 Identities=26% Similarity=0.397 Sum_probs=209.1
Q ss_pred HHHhhccccccCceEEEEEEE------CCCcEEEEEEEccCCc-ccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~------~~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
.+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 345678999999999999985 2467899999975533 3456789999999999 9999999999999999999
Q ss_pred EEEEeccCCCHHhhhccccc--------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 003039 599 LVYEFMHNGTLKEHLYGTLT--------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTH 180 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEET
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcC
Confidence 99999999999999964321 123588999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccch
Q 003039 665 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 742 (854)
Q Consensus 665 ~~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l 742 (854)
++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .+
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~ 257 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---KF 257 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---HH
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---HH
Confidence 999999999999866544332 2234457889999999999999999999999999999999 999997654221 11
Q ss_pred HHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
... ...+.. ...... ....+.+++.+|++.+|++|||+.||+++|++++.
T Consensus 258 ~~~----~~~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 258 YKM----IKEGFR-----MLSPEH----APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHH----HHHTCC-----CCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH----hccCCC-----CCCccc----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111 111110 000111 22458899999999999999999999999999865
No 74
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=364.38 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=202.4
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
..|.+.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 34566789999999999999875 689999999975532 234568899999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc---CCCcEEEEeeeccccc
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~---~~~~vkl~DFGla~~~ 679 (854)
|+.+|+|.+.+.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 91 ~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 91 LVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred eCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999998853 35688999999999999999999998 999999999999998 4678999999999765
Q ss_pred cCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... .......||+.|+|||++.+..++.++||||+||++|||++|..||...... .+... +..+... .
T Consensus 164 ~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~----~~~~~----i~~~~~~--~ 232 (444)
T 3soa_A 164 EGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH----RLYQQ----IKAGAYD--F 232 (444)
T ss_dssp CTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHH----HHHTCCC--C
T ss_pred cCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH----HHHHH----HHhCCCC--C
Confidence 4432 2233457999999999999999999999999999999999999999765421 12221 1222111 0
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ ...+.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~----s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWDTV----TPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CccccccC----CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 01111122 2357899999999999999999999986
No 75
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.3e-39 Score=350.93 Aligned_cols=250 Identities=23% Similarity=0.326 Sum_probs=196.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecC---------
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--------- 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~--------- 595 (854)
.+.+.+.||+|+||.||+|+++ +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 3455789999999999999987 78999999997543 334577999999999999999999999986543
Q ss_pred ------------------------------------------------eEEEEEEeccCCCHHhhhcccccccccccHHH
Q 003039 596 ------------------------------------------------RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIK 627 (854)
Q Consensus 596 ------------------------------------------------~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~ 627 (854)
..++||||+++|+|.+++.... ......+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~ 165 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHGV 165 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhHH
Confidence 3799999999999999996543 233456667
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC-----------ceeecccccccc
Q 003039 628 RLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-----------HVSSIVRGTVGY 696 (854)
Q Consensus 628 ~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~-----------~~~~~~~gt~~Y 696 (854)
++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 889999999999999998 999999999999999999999999999986654321 122334699999
Q ss_pred cCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHH
Q 003039 697 LDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIE 776 (854)
Q Consensus 697 ~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~ 776 (854)
+|||.+.+..++.++|||||||++|||++|..|+.... .+.. ........ .........+.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~------~~~~----~~~~~~~~---------~~~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV------RIIT----DVRNLKFP---------LLFTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------HHHH----HHHTTCCC---------HHHHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH------HHHH----HhhccCCC---------cccccCChhHH
Confidence 99999999999999999999999999999977653221 1111 11111111 11122334578
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 003039 777 EKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 777 ~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+++.+|++.+|++||++.|++++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999999875
No 76
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-38 Score=355.83 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=202.9
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
..|.+.+.||+|+||.||+|..+ +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45667889999999999999886 589999999975432 334678899999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEEEEeeeccccc
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkl~DFGla~~~ 679 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 109 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 109 LVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp CCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred cCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999998853 34688999999999999999999998 999999999999998654 5999999999765
Q ss_pred cCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..+... .
T Consensus 182 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----~~~~~----i~~~~~~--~ 249 (362)
T 2bdw_A 182 NDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQ----IKAGAYD--Y 249 (362)
T ss_dssp TTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCC--C
T ss_pred cCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHH----HHhCCCC--C
Confidence 4332 223456999999999999999999999999999999999999999764411 12221 1122111 0
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ ...+.+++.+|++.||++||++.|+++|
T Consensus 250 ~~~~~~~~----~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPEWDTV----TPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTGGGGS----CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CcccccCC----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00011112 2357899999999999999999999876
No 77
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.4e-39 Score=353.43 Aligned_cols=254 Identities=24% Similarity=0.417 Sum_probs=199.9
Q ss_pred HhhccccccCceEEEEEEEC-CCc----EEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~----~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.+.+.||+|+||.||+|++. +++ +||+|++.... ......+.+|+.++++++||||+++++++. .+..++|||
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 94 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ 94 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence 45688999999999999875 344 37888875442 233456778999999999999999999986 456899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 95 YLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred eCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999998642 45688899999999999999999998 9999999999999999999999999999876543
Q ss_pred CCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 683 ASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 683 ~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
... ......||..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.... .
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~----~~~~~~~~--~ 238 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPDL----LEKGERLA--Q 238 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHHH----HHTTCBCC--C
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHHH----HHcCCCCC--C
Confidence 322 2344568889999999999999999999999999999999 99999765422 22221 11111100 0
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+. .....+.+++.+|++.+|++||++.||+++|+.+...
T Consensus 239 ~~-------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 PQ-------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CT-------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CC-------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 1112467899999999999999999999999998653
No 78
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.9e-38 Score=342.97 Aligned_cols=259 Identities=17% Similarity=0.240 Sum_probs=206.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ....+.+|+.+++++ +|+|++++++++......++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 445688999999999999874 68999999986443 234578899999999 7999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc-----EEEEeeecccccc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 680 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-----vkl~DFGla~~~~ 680 (854)
+++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999999632 34589999999999999999999998 9999999999999987776 9999999998665
Q ss_pred CCCCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 681 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 681 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....+........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKYERIGEKKQSTP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHHHHHHHHHHHSC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHHHHHHhhccCcc
Confidence 43221 234456999999999999999999999999999999999999999765422211 11111111111111
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+ +.... ...+.+++.+|++.+|++||++.+|++.|++++.
T Consensus 242 ~~~-----~~~~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 242 LRE-----LCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHH-----HTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHH-----HHhhC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 110 11112 2468899999999999999999999999999865
No 79
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.9e-39 Score=343.90 Aligned_cols=260 Identities=24% Similarity=0.379 Sum_probs=204.5
Q ss_pred HHhhccccccCceEEEEEEECC----CcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~----~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|++.. +..||||++.... ....+.+.+|++++++++||||+++++++.++ ..++|||
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e 92 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIME 92 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEE
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEe
Confidence 3457899999999999998653 3469999987653 33457789999999999999999999998754 5689999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 93 LYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp CCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred cCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999953 234588999999999999999999998 9999999999999999999999999999865544
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+..... .+....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~~~~~----~~~~~~---- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIGVLE----KGDRLP---- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHHHHHH----HTCCCC----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHHHHHh----cCCCCC----
Confidence 3333344557889999999998899999999999999999998 99999754321 2222111 111100
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREAA 811 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~~~~ 811 (854)
.... ....+.+++.+|++.+|++||++.||+++|+++...+.+.+
T Consensus 235 -~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~i~ 279 (281)
T 3cc6_A 235 -KPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 279 (281)
T ss_dssp -CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhhhh
Confidence 0111 12458899999999999999999999999999987765543
No 80
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.6e-39 Score=365.95 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=203.0
Q ss_pred HhhccccccCceEEEEEEECC-CcEEEEEEEccCCc---ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~-~~~VAvK~l~~~~~---~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.++||+|+||+||+|+++. ++.||||+++.... .....+.+|+.++..++||||++++++|.+.+..++||||+
T Consensus 77 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~ 156 (437)
T 4aw2_A 77 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 156 (437)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecC
Confidence 346789999999999999874 78899999964321 12334889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 157 ~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 157 VGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999999642 45689999999999999999999998 999999999999999999999999999986655544
Q ss_pred ceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 685 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+... -.+.
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----~~~p--- 303 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER----FQFP--- 303 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----CCCC---
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc----ccCC---
Confidence 4455567999999999997 567899999999999999999999999865532222222221111 1111
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
......+ ..+.+++.+|+..+|++ ||+++|+++|
T Consensus 304 --~~~~~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 --TQVTDVS----ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --SSCCCSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --cccccCC----HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1111122 35778999999888888 9999999987
No 81
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.2e-38 Score=356.49 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=200.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---ccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.++||+|+||.||+|+.+ +++.||||+++.... .....+..|..++.++ +||||+++++++...+..++|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 345789999999999999987 578899999975422 2234578899999887 89999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 134 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999998853 45689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc-ccchHHHHHHhhhcCCcccccCc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-CRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~-~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...........+..+.+
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred -CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2234456799999999999999999999999999999999999999965332111 11112222222222221
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
.+.... ...+.+++.+|++.||++||++ .||++|
T Consensus 280 ~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 280 RIPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CCCTTS----CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCCCcC----CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 111112 2357899999999999999985 677665
No 82
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.5e-39 Score=345.83 Aligned_cols=250 Identities=24% Similarity=0.421 Sum_probs=200.0
Q ss_pred HHhhccccccCceEEEEEEECC-C-------cEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKD-G-------KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~-~-------~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
+.+.+.||+|+||.||+|.... + ..||+|++........+.+.+|++++++++||||+++++++..++..++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL 89 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence 4567899999999999998663 3 5799999976666667789999999999999999999999999999999
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc--------EEEE
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--------AKVS 671 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--------vkl~ 671 (854)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 90 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 90 VQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999642 34488899999999999999999998 9999999999999998887 9999
Q ss_pred eeeccccccCCCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcc-cccccccccccchHHHHHHh
Q 003039 672 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEA-ISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~p-f~~~~~~~~~~~l~~~~~~~ 749 (854)
|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|..| +..... ...... .
T Consensus 164 Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~~~~---~ 231 (289)
T 4fvq_A 164 DPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS----QRKLQF---Y 231 (289)
T ss_dssp CCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHHHH---H
T ss_pred cCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch----HHHHHH---h
Confidence 9999864422 123458999999999987 7789999999999999999996544 433221 011111 1
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.....+.. .. ...+.+++.+|++.+|++|||+.|++++|++++...
T Consensus 232 ~~~~~~~~--------~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 232 EDRHQLPA--------PK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HTTCCCCC--------CS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred hccCCCCC--------CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 11111111 11 124778999999999999999999999999987643
No 83
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=348.07 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=194.8
Q ss_pred HHHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccC-CCCceeeEeeeeeecCe
Q 003039 521 SDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 521 ~~~~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~ 596 (854)
+++....+.+.++||+|+||+||+|++. +++.||||++..... .....+..|+..+.++ +||||++++++|.+.+.
T Consensus 52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~ 131 (311)
T 3p1a_A 52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI 131 (311)
T ss_dssp SCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred cchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence 4455566777889999999999999987 689999999865432 2233455566555555 89999999999999999
Q ss_pred EEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecc
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla 676 (854)
.++||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceee
Confidence 99999999 67998888542 34689999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 677 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
+..... .......||++|+|||++.+ .++.++|||||||++|||++|..|+.... .| ..+..+...
T Consensus 205 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---------~~--~~~~~~~~~ 270 (311)
T 3p1a_A 205 VELGTA--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---------GW--QQLRQGYLP 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---------HH--HHHTTTCCC
T ss_pred eecccC--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HH--HHHhccCCC
Confidence 765432 22334569999999998875 78999999999999999999977664322 01 111111111
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.+... ....+.+++.+|++.+|++|||+.|++++
T Consensus 271 ----~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 ----PEFTAG----LSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----cccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111111 22468899999999999999999999875
No 84
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.6e-39 Score=352.32 Aligned_cols=263 Identities=25% Similarity=0.383 Sum_probs=204.9
Q ss_pred HHHhhccccccCceEEEEEEE-----CCCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeec--CeEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~-----~~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~--~~~~ 598 (854)
.+.+.+.||+|+||.||+|++ .+++.||||++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 345678999999999999984 368899999997543 33457789999999999999999999999876 6689
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 102 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccc
Confidence 999999999999998532 34588999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-------cccccchHHHHHHh
Q 003039 679 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-------GANCRNIVQWAKLH 749 (854)
Q Consensus 679 ~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~-------~~~~~~l~~~~~~~ 749 (854)
....... ......||..|+|||.+.+..++.++|||||||++|||++|+.|+..... +.............
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 6544322 22345688899999999999999999999999999999999998753210 00001111111122
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
...+.. ...+......+.+++.+|++.+|++|||+.||++.|++++
T Consensus 256 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKR---------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCC---------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 222211 1111122346889999999999999999999999999875
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.6e-38 Score=347.77 Aligned_cols=264 Identities=23% Similarity=0.317 Sum_probs=191.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.+.||+|+||.||+|..+ +++.||||+++... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4556789999999999999876 58999999997543 233467889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccc--cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 605 HNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 605 ~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
+ |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 69999885432 1224588899999999999999999998 9999999999999999999999999999865432
Q ss_pred CCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc--------C
Q 003039 683 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES--------G 753 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~--------~ 753 (854)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.......... .
T Consensus 162 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (317)
T 2pmi_A 162 V-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240 (317)
T ss_dssp C-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred c-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhh
Confidence 2 22233468999999999976 468999999999999999999999997654221111111110000000 0
Q ss_pred C------------cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 754 D------------IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~------------~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. +...+.+..... ....+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 241 KYNPNIQQRPPRDLRQVLQPHTKEP----LDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TCCTTCCCCCCCCSHHHHGGGCSSC----CCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhHHHhhccccccc----CCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 000001111111 12368899999999999999999999886
No 86
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-38 Score=349.63 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=180.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CCceeeEeeeeeecCeEEEEEEeccCCCH
Q 003039 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
+.||+|+||.||+|..+ +++.||||++... ....+.+|+.+++++. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67999999999999986 6899999998643 3567788999999997 99999999999999999999999999999
Q ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEEEEeeeccccccCCCCce
Q 003039 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkl~DFGla~~~~~~~~~~ 686 (854)
.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++...... ..
T Consensus 94 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~ 165 (325)
T 3kn6_A 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QP 165 (325)
T ss_dssp HHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cc
Confidence 999853 45689999999999999999999998 999999999999998765 89999999998654332 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.............+.. ..+..+... . ...
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-~~i~~~~~~--~----~~~ 238 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM-KKIKKGDFS--F----EGE 238 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH-HHHTTTCCC--C----CSH
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH-HHHHcCCCC--C----Ccc
Confidence 334568999999999999999999999999999999999999997654322222222222 222222211 0 000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........+.+++.+|++.||++|||+.|+++|
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 001123468899999999999999999999865
No 87
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.4e-39 Score=364.94 Aligned_cols=248 Identities=22% Similarity=0.274 Sum_probs=200.5
Q ss_pred hhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.||+|+||.||+|+.+ +++.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4578999999999999987 58899999986431 1223457889999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 153 gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 153 GGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp TEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred CCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 9999998853 3578889999999999999999998 9999999999999999999999999999866544433
Q ss_pred eeecccccccccCccccccCc----CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 686 VSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~----~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+....+..+... -....
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~----~~~p~---- 296 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS----LTFPD---- 296 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----CCCCT----
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc----ccCCC----
Confidence 445667999999999998655 889999999999999999999999765432222222221110 00000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
....+ ..+.+|+.+|++.+|++ ||+++||++|
T Consensus 297 --~~~~s----~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 --DNDIS----KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --TCCCC----HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --ccccc----HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 01112 35789999999999988 9999999987
No 88
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.8e-38 Score=342.87 Aligned_cols=260 Identities=20% Similarity=0.240 Sum_probs=196.0
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++..++..++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence 45678999999999999986 589999999975432 234678899999999999999999999999999999999998
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 85 ~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 85 Q-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp E-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred C-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 6 55555532 245689999999999999999999998 99999999999999999999999999998654322 2
Q ss_pred eeecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC---Ccccc---
Q 003039 686 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---DIQGI--- 758 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~-~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~---~~~~~--- 758 (854)
......||+.|+|||++.+.. ++.++|||||||++|||++|..|+..... ............... .....
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND---VDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS---HHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC---HHHHHHHHHHHhCCCChhhhhhhccc
Confidence 233456899999999998765 79999999999999999998888533221 111111111111100 00000
Q ss_pred cC---------ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 759 ID---------PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id---------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+ ..............+.+++.+|++.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 000000111223457899999999999999999999875
No 89
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-38 Score=346.21 Aligned_cols=260 Identities=30% Similarity=0.508 Sum_probs=200.2
Q ss_pred HHHHHHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 524 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
....+.+.++||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3344566789999999999999875 468999887543 2335678999999999999999999998754 5579999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 111 QWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp ECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred ecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999999853 345688999999999999999999998 999999999999999999999999999975433
Q ss_pred C-CCceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 682 G-ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 682 ~-~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||......+ .+... ...+....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---~~~~~----~~~~~~~~ 257 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFM----VGRGYASP 257 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHH----HHHTCCCC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH---HHHHH----HhcCCCCc
Confidence 2 122233456999999999986 5678889999999999999999999997544211 11111 11111111
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+ +.+.... ...+.+++.+|++.+|++||++.||+++|+.+.
T Consensus 258 ~~-~~~~~~~----~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 258 DL-SKLYKNC----PKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CS-TTSCSSS----CHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred ch-hhhhcCC----cHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 01 1111222 246889999999999999999999999999874
No 90
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-38 Score=351.09 Aligned_cols=257 Identities=22% Similarity=0.262 Sum_probs=197.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccC-----CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-----SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~-----~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
..|.+.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 34566889999999999999875 6889999998643 23445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHhhhcccccc------------------------------------cccccHHHHHHHHHHHHHHHHHHH
Q 003039 600 VYEFMHNGTLKEHLYGTLTH------------------------------------EQRINWIKRLEIAEDAAKGIEYLH 643 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH 643 (854)
||||+++|+|.+++...... ...+++..+..++.|++.||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998532111 223467778899999999999999
Q ss_pred hCCCCceecCCCCCCCEEEcCCC--cEEEEeeeccccccCCC---CceeecccccccccCcccccc--CcCCCcchhhhH
Q 003039 644 TGCVPAIIHRDLKSSNILLDKHM--RAKVSDFGLSKFAVDGA---SHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSF 716 (854)
Q Consensus 644 ~~~~~~ivHrDIkp~NILl~~~~--~vkl~DFGla~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~--~~~s~~~DVwSl 716 (854)
+. +|+||||||+|||++.++ .+||+|||+++...... ........||+.|+|||.+.+ ..++.++|||||
T Consensus 186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 98 999999999999998776 89999999998553321 112344569999999999975 678999999999
Q ss_pred HHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 003039 717 GVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEV 796 (854)
Q Consensus 717 Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV 796 (854)
||++|||++|+.||......+ ........... ...+. .... ...+.+++.+|++.+|++||++.|+
T Consensus 263 G~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~~--~~~~~-~~~~----~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDAD-------TISQVLNKKLC--FENPN-YNVL----SPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHHH-------HHHHHHHCCCC--TTSGG-GGGS----CHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHCCCCCCCCChHH-------HHHHHHhcccc--cCCcc-cccC----CHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999997654211 11111111100 00000 1111 2357899999999999999999999
Q ss_pred HHH
Q 003039 797 LKD 799 (854)
Q Consensus 797 ~~~ 799 (854)
+++
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 875
No 91
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-38 Score=354.67 Aligned_cols=266 Identities=16% Similarity=0.229 Sum_probs=203.9
Q ss_pred HHHhhccccccCceEEEEEEECC------CcEEEEEEEccCCcccH-----------HHHHHHHHHHccCCCCceeeEee
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQGK-----------REFTNEVTLLSRIHHRNLVQFLG 589 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~------~~~VAvK~l~~~~~~~~-----------~~~~~Ev~~L~~l~HpnIv~l~g 589 (854)
.|.+.+.||+|+||.||+|.+.. ++.||||++........ ..+..|+..++.++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 34567899999999999998864 47899999875532111 12344666778889999999999
Q ss_pred eeeec----CeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc--
Q 003039 590 YCQEE----GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-- 663 (854)
Q Consensus 590 ~~~~~----~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-- 663 (854)
++... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 98764 4589999999 9999999853 235689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeeeccccccCCCCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccc
Q 003039 664 KHMRAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 737 (854)
Q Consensus 664 ~~~~vkl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~ 737 (854)
.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 8899999999999765432111 113345999999999999999999999999999999999999999864311
Q ss_pred cccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.....+...... ..+.+++++.+.... ....+.+++..|++.+|++||++.+|++.|++++..
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 268 --PKYVRDSKIRYR-ENIASLMDKCFPAAN---APGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp --HHHHHHHHHHHH-HCHHHHHHHHSCTTC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhh-hhHHHHHHHhccccc---CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 122222222211 123333443332111 124588999999999999999999999999998764
No 92
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.4e-38 Score=350.23 Aligned_cols=264 Identities=24% Similarity=0.385 Sum_probs=209.1
Q ss_pred HHHhhccccccCceEEEEEEECC------CcEEEEEEEccCC-cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~------~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
.+.+.+.||+|+||.||+|.... ...||+|++.... ......+.+|+++++++ +||||+++++++...+..+
T Consensus 47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 126 (333)
T 2i1m_A 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126 (333)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceE
Confidence 34567899999999999998752 2479999997653 23456789999999999 8999999999999999999
Q ss_pred EEEEeccCCCHHhhhccccc----------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcE
Q 003039 599 LVYEFMHNGTLKEHLYGTLT----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 668 (854)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEE
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeE
Confidence 99999999999999864321 133578899999999999999999998 99999999999999999999
Q ss_pred EEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHH
Q 003039 669 KVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWA 746 (854)
Q Consensus 669 kl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~ 746 (854)
||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||....... .+...
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~- 279 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---KFYKL- 279 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---HHHHH-
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---HHHHH-
Confidence 99999999865433222 2234457889999999999999999999999999999999 999997644221 11111
Q ss_pred HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 003039 747 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIERE 809 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~~ 809 (854)
...+.. ... +......+.+++..|++.+|++|||+.||+++|+++....+.
T Consensus 280 ---~~~~~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 280 ---VKDGYQ-----MAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp ---HHHTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ---HhcCCC-----CCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 111110 000 111124578999999999999999999999999998765443
No 93
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=341.26 Aligned_cols=253 Identities=26% Similarity=0.403 Sum_probs=205.3
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 532 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~---~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999864 57889999997653 33456789999999999999999999999 556789999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce-
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV- 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~- 686 (854)
+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 95 ~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999853 245688999999999999999999998 99999999999999999999999999998664433222
Q ss_pred -eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 687 -SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 687 -~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+... .
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~----i~~~~~~-----~-- 233 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAF----IEQGKRM-----E-- 233 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHHHH----HHTTCCC-----C--
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHHHH----HhcCCcC-----C--
Confidence 123346899999999998899999999999999999998 99999765421 12221 1222111 1
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
.+......+.+++..|++.+|++||++.||+++|+++.....
T Consensus 234 --~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 234 --CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp --CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 111223468899999999999999999999999999876543
No 94
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=349.04 Aligned_cols=242 Identities=24% Similarity=0.395 Sum_probs=200.3
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~ 88 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI 88 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCC
Confidence 45688999999999999886 68999999997532 233466788999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--- 158 (318)
T 1fot_A 89 EGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--- 158 (318)
T ss_dssp CSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC---
Confidence 99999999853 34688899999999999999999998 999999999999999999999999999986533
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ . ..... .+.. .+.
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~---~~~i~-~~~~------~~p 223 (318)
T 1fot_A 159 -VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----T---YEKIL-NAEL------RFP 223 (318)
T ss_dssp -CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----H---HHHHH-HCCC------CCC
T ss_pred -ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----H---HHHHH-hCCC------CCC
Confidence 2234579999999999999999999999999999999999999997644211 1 11111 1111 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
..++ ..+.+++.+|++.+|++|| +++||++|
T Consensus 224 ~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 PFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp TTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1222 3578999999999999999 89999876
No 95
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.7e-38 Score=342.39 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=199.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 113 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEec
Confidence 556789999999999999875 68999999997532 23356788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++|+|.+++.........+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 999999999865444456688999999999999999999998 99999999999999999999999999987654322
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ....... .+..+......
T Consensus 191 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~-~~~~~~~~~~~---- 259 (310)
T 2wqm_A 191 -TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCK-KIEQCDYPPLP---- 259 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHH-HHHTTCSCCCC----
T ss_pred -ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHH-HhhcccCCCCc----
Confidence 222334689999999999999999999999999999999999999965431 1122211 12222221111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
...+ ...+.+++.+|++.||++||++.||++.|+++....
T Consensus 260 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 260 SDHY----SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp TTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 1122 235889999999999999999999999999986544
No 96
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-38 Score=351.56 Aligned_cols=244 Identities=23% Similarity=0.359 Sum_probs=199.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 445789999999999999974 68999999986432 22245788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+ +|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 91 A-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp C-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred C-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9 7899888843 45688999999999999999999998 99999999999999999999999999998654432
Q ss_pred CceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...........+. .+. ..
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~--------~~~------~~ 226 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN--------SCV------YV 226 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC--------SSC------CC
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH--------cCC------CC
Confidence 2234569999999999988776 679999999999999999999997655332221110 000 00
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.... ...+.+++.+|++.||++|||+.|++++
T Consensus 227 ~p~~~----s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 227 MPDFL----SPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCTTS----CHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CcccC----CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 11112 2357899999999999999999999886
No 97
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.9e-38 Score=339.93 Aligned_cols=250 Identities=32% Similarity=0.572 Sum_probs=198.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCccc-------HHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG-------KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~-------~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
+.+.+.||+|+||.||+|++. +++.||||++....... .+.+.+|++++++++||||+++++++.... ++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~l 98 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RM 98 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EE
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eE
Confidence 445789999999999999885 68999999986543221 167889999999999999999999997665 69
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCc-----EEEEe
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMR-----AKVSD 672 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~-----vkl~D 672 (854)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++. +||+|
T Consensus 99 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred EEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 9999999999988853 345689999999999999999999998 7 999999999999988776 99999
Q ss_pred eeccccccCCCCceeecccccccccCccccc--cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... ........
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~~ 243 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIR 243 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-----HHHHHHHH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-----HHHHHHHh
Confidence 999974332 233456999999999984 5567889999999999999999999997654211 11111111
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..+ . .+.+.... ...+.+++.+|++.+|++||++.||++.|+++
T Consensus 244 ~~~-~----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEG-L----RPTIPEDC----PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSC-C----CCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccC-C----CCCCCccc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111 1 11111222 34688999999999999999999999999863
No 98
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.4e-39 Score=352.48 Aligned_cols=263 Identities=23% Similarity=0.429 Sum_probs=209.3
Q ss_pred HHHHhhccccccCceEEEEEEEC--------CCcEEEEEEEccCC-cccHHHHHHHHHHHccC-CCCceeeEeeeeeecC
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 595 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~--------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~ 595 (854)
..+.+.+.||+|+||.||+|++. +++.||||+++... ......+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 34556789999999999999873 46789999997553 23356788999999999 8999999999999999
Q ss_pred eEEEEEEeccCCCHHhhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc
Q 003039 596 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 596 ~~~LV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~ 663 (854)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 191 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEc
Confidence 99999999999999999965421 123588999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccc
Q 003039 664 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 741 (854)
Q Consensus 664 ~~~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~ 741 (854)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~ 267 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----E 267 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----H
Confidence 9999999999999865443222 2233457889999999998899999999999999999999 99999764421 1
Q ss_pred hHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003039 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
+... +..+.... .... ....+.+++.+|++.+|++||++.||+++|++++....
T Consensus 268 ~~~~----~~~~~~~~-----~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 268 LFKL----LKEGHRMD-----KPAN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHH----HHHTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHH----HhcCCCCC-----CCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 2221 11221111 1111 22458899999999999999999999999999976543
No 99
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.6e-38 Score=336.60 Aligned_cols=249 Identities=21% Similarity=0.310 Sum_probs=201.1
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeec--CeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~--~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|+++ ++.||||+++... ....+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 345789999999999999986 8999999997653 23456799999999999999999999999877 788999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
+++|+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.++|+|||++.....
T Consensus 91 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 91 MPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp CTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999642 233589999999999999999999997 7 99999999999999999999999998754222
Q ss_pred CCCceeecccccccccCccccccCcCCC---cchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTD---KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~---~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||...... .........+.
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~---- 228 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVALEGL---- 228 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHHSCC----
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHhcCC----
Confidence 2235899999999998766555 799999999999999999999764411 11111111111
Q ss_pred cCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+.+.... ...+.+++..|++.+|++|||+.||++.|+++.
T Consensus 229 -~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 229 -RPTIPPGI----SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp -CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred -CCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11111222 235889999999999999999999999999864
No 100
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=340.75 Aligned_cols=252 Identities=29% Similarity=0.472 Sum_probs=195.0
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
.+.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++|+
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~ 85 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGS 85 (307)
T ss_dssp EEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCB
T ss_pred eeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCC
Confidence 45688999999999999986 789999998643 345678999999999999999999999874 4789999999999
Q ss_pred HHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc-EEEEeeeccccccCCCCcee
Q 003039 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-AKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-vkl~DFGla~~~~~~~~~~~ 687 (854)
|.+++.... ....+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++..... .
T Consensus 86 L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~ 160 (307)
T 2eva_A 86 LYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----M 160 (307)
T ss_dssp HHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred HHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----c
Confidence 999996432 2234678889999999999999999933238999999999999998886 799999999754322 2
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcC
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....|. ...+... .+....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~---~~~~~~~-----~~~~~~ 229 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA---FRIMWA---VHNGTRP-----PLIKNL 229 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH---HHHHHH---HHTTCCC-----CCBTTC
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH---HHHHHH---HhcCCCC-----Cccccc
Confidence 23458999999999999999999999999999999999999997543110 011111 1111111 111222
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+ ..+.+++.+|++.+|++|||+.||+++|+.+..
T Consensus 230 ~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 230 P----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp C----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred C----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 2 357899999999999999999999999998754
No 101
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=354.55 Aligned_cols=272 Identities=21% Similarity=0.281 Sum_probs=211.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecC--eEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~--~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 445789999999999999987 48999999997543 234567889999999999999999999998755 77999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE----cCCCcEEEEeeeccccc
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~vkl~DFGla~~~ 679 (854)
+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred CCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999996432 223389999999999999999999998 99999999999999 78888999999999865
Q ss_pred cCCCCceeecccccccccCcccccc--------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYIS--------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred cCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 4322 2234569999999999875 56788999999999999999999999754432222222221111111
Q ss_pred cCCcccc---------cCccc--cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 752 SGDIQGI---------IDPSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 752 ~~~~~~~---------id~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+..+ ....+ ...........+.+++.+|++.||++||++.|+++.+++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111100 00011 123346677788999999999999999999999999998875
No 102
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.6e-39 Score=355.40 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=199.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E 98 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 98 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 345689999999999999986 58899999997542 22345677899998876 89999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 99 YLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999853 35688999999999999999999998 9999999999999999999999999999754322
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..+.. .
T Consensus 172 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~----i~~~~~------~ 236 (345)
T 1xjd_A 172 D-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHS----IRMDNP------F 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCC------C
T ss_pred C-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH----HHHHH----HHhCCC------C
Confidence 2 2234567999999999999999999999999999999999999999765421 12111 111111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~-eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++||++. ||.+|
T Consensus 237 ~p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 237 YPRWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp CCTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCccc----CHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 11112 23578999999999999999997 77654
No 103
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.9e-38 Score=348.73 Aligned_cols=246 Identities=23% Similarity=0.338 Sum_probs=191.6
Q ss_pred HHhhccccccCceEEEEEEE----CCCcEEEEEEEccCC----cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~----~~~~~VAvK~l~~~~----~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
+.+.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++...+..++
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 98 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL 98 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEE
Confidence 45678999999999999987 468999999997542 2234567889999999999999999999999999999
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 99 ILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999999853 34578889999999999999999998 9999999999999999999999999998754
Q ss_pred cCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... ... .+..
T Consensus 172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~---~i~-~~~~---- 238 (327)
T 3a62_A 172 IHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK----KTID---KIL-KCKL---- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHH---HHH-HTCC----
T ss_pred ccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH----HHHH---HHH-hCCC----
Confidence 3221 2233456999999999999999999999999999999999999999765421 1111 111 1111
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.+.... ...+.+++.+|++.+|++|| ++.|+++|
T Consensus 239 --~~p~~~----~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 --NLPPYL----TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --CCCTTS----CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCCCC----CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 011112 23578999999999999999 78888876
No 104
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=341.35 Aligned_cols=268 Identities=24% Similarity=0.361 Sum_probs=200.8
Q ss_pred HHHHHHHHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHcc--CCCCceeeEeeeeeec----C
Q 003039 522 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEE----G 595 (854)
Q Consensus 522 ~~~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~--l~HpnIv~l~g~~~~~----~ 595 (854)
......+.+.+.||+|+||.||+|++. ++.||||++... ....+..|.+++.. ++||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 334456677899999999999999987 899999998643 23344455555555 4899999999999877 7
Q ss_pred eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-----CCceecCCCCCCCEEEcCCCcEEE
Q 003039 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 596 ~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDIkp~NILl~~~~~vkl 670 (854)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 88999999999999999943 35889999999999999999999852 238999999999999999999999
Q ss_pred EeeeccccccCCCCce---eecccccccccCccccccCcCCCc------chhhhHHHHHHHHHhC----------Ccccc
Q 003039 671 SDFGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQQLTDK------SDVYSFGVILLELISG----------QEAIS 731 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~s~~------~DVwSlGvvl~elltG----------~~pf~ 731 (854)
+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999997554332221 124469999999999987766665 9999999999999999 55554
Q ss_pred cccccccccchHHHHHHhhhcCCcccccCccccCcC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 732 NEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 732 ~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....... . ............. .+.+.... .......+.+++.+|++.+|++|||+.||+++|+++..
T Consensus 264 ~~~~~~~--~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 264 DLVPSDP--S-YEDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTSCSSC--C-HHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCCC--c-hhhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 3321111 1 1111111111111 11111111 22566779999999999999999999999999999764
No 105
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.6e-38 Score=348.31 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=199.8
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---ccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEe
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
.+.+.||+|+||.||+|+.+ +++.||||+++.... .....+.+|..++.++ +||||+++++++...+..++||||
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~ 91 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 91 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeC
Confidence 45688999999999999987 588999999975432 2345678899999987 899999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 92 VNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp CCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 999999999853 35688999999999999999999998 99999999999999999999999999997533222
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc-cchHHHHHHhhhcCCcccccCcc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-RNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~-~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..........+..+...
T Consensus 165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 237 (345)
T 3a8x_A 165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 237 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC------
T ss_pred -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC------
Confidence 2334557999999999999999999999999999999999999999653211110 01112222222222211
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++||++ .|+++|
T Consensus 238 ~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 IPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CCCCC----CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11122 2357899999999999999995 677665
No 106
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2e-38 Score=351.78 Aligned_cols=242 Identities=24% Similarity=0.324 Sum_probs=200.6
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 123 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCC
Confidence 34678999999999999986 68999999986432 233467889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 124 AGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 99999999853 34688999999999999999999998 9999999999999999999999999999865432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .+..+.. .+.
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~----~i~~~~~------~~p 258 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYE----KIVSGKV------RFP 258 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCC------CCC
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH----HHHH----HHHcCCC------CCC
Confidence 23456999999999999999999999999999999999999999764421 1111 1112211 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
..+ ...+.+++.+|++.+|++||+ ++||.+|
T Consensus 259 ~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 SHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TTC----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCC----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 122 235789999999999999998 8888876
No 107
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.4e-38 Score=351.66 Aligned_cols=250 Identities=25% Similarity=0.300 Sum_probs=191.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
|.+.+.||+|+||+||+++.. +++.||||++..... ....+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 100 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG 100 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCC
Confidence 556789999999999999987 689999999975432 346688999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc--EEEEeeeccccccCCCC
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--vkl~DFGla~~~~~~~~ 684 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 101 ~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 101 GELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 999998843 45689999999999999999999998 9999999999999987765 999999999743222
Q ss_pred ceeecccccccccCccccccCcCCCc-chhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDK-SDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~-~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...........+.. .... .... +..
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~---~~~~-~~~~--~~~-- 243 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ---RILS-VKYS--IPD-- 243 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH---HHHT-TCCC--CCT--
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH---HHhc-CCCC--CCC--
Confidence 12233469999999999988887665 8999999999999999999976553322222222 1111 1110 000
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 244 ~~~~----s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 DIRI----SPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TSCC----CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cCCC----CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0011 2357899999999999999999999987
No 108
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.2e-38 Score=345.52 Aligned_cols=262 Identities=27% Similarity=0.422 Sum_probs=208.0
Q ss_pred HHHhhccccccCceEEEEEEE------CCCcEEEEEEEccCCc-ccHHHHHHHHHHHccC-CCCceeeEeeeeeecC-eE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG-RS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~------~~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~-~~ 597 (854)
.+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++...+ ..
T Consensus 28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 107 (316)
T 2xir_A 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 107 (316)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCce
Confidence 455678999999999999975 2468899999976533 3346788999999999 7999999999987654 58
Q ss_pred EEEEEeccCCCHHhhhcccccc------------cccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC
Q 003039 598 VLVYEFMHNGTLKEHLYGTLTH------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 598 ~LV~E~~~~gsL~~~L~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEK 184 (316)
T ss_dssp EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCC
Confidence 9999999999999999654321 12388999999999999999999998 99999999999999999
Q ss_pred CcEEEEeeeccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchH
Q 003039 666 MRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~vkl~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .+.
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~ 261 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFC 261 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH---HHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH---HHH
Confidence 99999999999865443322 2334568899999999999999999999999999999998 999997644211 111
Q ss_pred HHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 744 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
. .+..+.... ..... ...+.+++.+|++.+|++|||+.||+++|++++...
T Consensus 262 ~----~~~~~~~~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 262 R----RLKEGTRMR-----APDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp H----HHHHTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H----HhccCccCC-----CCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1 112221111 11111 235789999999999999999999999999987643
No 109
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=349.87 Aligned_cols=248 Identities=24% Similarity=0.333 Sum_probs=192.9
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCCC--CceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~H--pnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|+++|++++| |||+++++++...+..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 34568999999999999999889999999987543 2334678899999999976 999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999853 45688999999999999999999998 999999999999997 5789999999998654432
Q ss_pred Cc-eeecccccccccCcccccc-----------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003039 684 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 684 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~ 235 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIID 235 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHHHC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh------hHHHHHHHHhc
Confidence 22 2334579999999999865 678889999999999999999999996532 11111111111
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.....++......+.+++.+|++.+|++|||+.|+++|
T Consensus 236 ---------~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 236 ---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------CCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111111111112457899999999999999999999987
No 110
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1e-37 Score=335.90 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=198.5
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.++||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 4667899999999999999876 58899999987543 334678899999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccccccC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~~~~~ 681 (854)
++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 99999999865544456789999999999999999999998 99999999999999 4568899999999976543
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. .......||+.|+|||.+. +.++.++|||||||++|||++|+.||...... .+..... .........
T Consensus 180 ~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~----~~~~~~~----~~~~~~~~~- 247 (285)
T 3is5_A 180 D--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE----EVQQKAT----YKEPNYAVE- 247 (285)
T ss_dssp ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HCCCCCCC--
T ss_pred c--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH----HHHhhhc----cCCcccccc-
Confidence 2 2233456899999999875 56889999999999999999999999765421 1111111 111000000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++|||+.||+++
T Consensus 248 --~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 --CRPL----TPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred --cCcC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 2357799999999999999999999875
No 111
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=348.93 Aligned_cols=255 Identities=25% Similarity=0.433 Sum_probs=199.3
Q ss_pred HhhccccccCceEEEEEEECC-----CcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~-----~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.+.+.||+|+||.||+|.+.. +..||||+++... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 126 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE 126 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEe
Confidence 345789999999999998753 2359999997553 2335578899999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 127 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 127 YMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999853 235688999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 683 ASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.. .+..+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~----~~~~~~~~--- 269 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVMK----AINDGFRL--- 269 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHH----HHHTTCCC---
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----HHHH----HHHCCCcC---
Confidence 221 1222346789999999999999999999999999999999 99999654311 1111 11122100
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+......+.+++.+|++.+|++||++.||+++|++++..
T Consensus 270 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 ------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00112234688999999999999999999999999998753
No 112
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.9e-38 Score=337.17 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=202.5
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
..|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 34566789999999999999887 47789999998765566788999999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccccccC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~~~~~ 681 (854)
++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++.....
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 89 TGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999998843 45588999999999999999999998 99999999999999 7889999999999976543
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.. ......||+.|+|||.+.+. ++.++|||||||++|||++|+.||...... .+.. .+..+.... ..
T Consensus 162 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~~--~~ 228 (277)
T 3f3z_A 162 GK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS----EVML----KIREGTFTF--PE 228 (277)
T ss_dssp TS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCCC--CH
T ss_pred cc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHhCCCCC--Cc
Confidence 32 22344699999999988654 899999999999999999999999764421 1111 111111100 00
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ....+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~~~----~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 KDWLN----VSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhhhc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001 12467899999999999999999999875
No 113
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=347.21 Aligned_cols=260 Identities=22% Similarity=0.293 Sum_probs=203.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeee----ecCeEEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ----EEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~----~~~~~~LV~ 601 (854)
.|.+.+.||+|+||.||+++.. +++.||||++..........+.+|++++++++||||+++++++. .....++||
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 3456789999999999999974 68999999987666566778999999999999999999999986 334789999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999976544566789999999999999999999998 999999999999999999999999999865421
Q ss_pred CCCc--------eeecccccccccCccccccCc---CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 682 GASH--------VSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 682 ~~~~--------~~~~~~gt~~Y~aPE~~~~~~---~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
.... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....... ..+.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~- 263 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DSVALAVQNQ- 263 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SCHHHHHHCC-
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--chhhHHhhcc-
Confidence 1100 012234799999999987543 7899999999999999999999996532111 1111111110
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
... ...... ...+.+++.+|++.+|++||++.||+++|+.+.
T Consensus 264 --~~~------~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 264 --LSI------PQSPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp ----C------CCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred --CCC------CccccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 000 001112 245889999999999999999999999999863
No 114
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.4e-38 Score=344.74 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=204.0
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc------cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~------~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..|.+.+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34667889999999999999986 5899999999754321 3567999999999999999999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeee
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 674 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~vkl~DFG 674 (854)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999853 45688999999999999999999998 999999999999999888 79999999
Q ss_pred ccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .... . +....
T Consensus 165 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~---~-i~~~~ 234 (321)
T 2a2a_A 165 LAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLA---N-ITSVS 234 (321)
T ss_dssp TCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHH---H-HHTTC
T ss_pred cceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH----HHHH---H-HHhcc
Confidence 998654432 223446999999999999999999999999999999999999999754311 1111 1 11111
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..++...... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 235 ~--~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 Y--DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp C--CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred c--ccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0111111122 2357899999999999999999999986
No 115
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.9e-37 Score=342.20 Aligned_cols=269 Identities=23% Similarity=0.379 Sum_probs=210.3
Q ss_pred cCHHHHHHHHHHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHcc--CCCCceeeEeeeeeecC
Q 003039 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 518 ~~~~~~~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~--l~HpnIv~l~g~~~~~~ 595 (854)
+...+.....+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+|++++.. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3345555667778899999999999999985 899999998643 34567788888877 78999999999998776
Q ss_pred ----eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH--------hCCCCceecCCCCCCCEEEc
Q 003039 596 ----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 596 ----~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDIkp~NILl~ 663 (854)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 78999999999999999953 35889999999999999999999 66 999999999999999
Q ss_pred CCCcEEEEeeeccccccCCCCc---eeecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC--------
Q 003039 664 KHMRAKVSDFGLSKFAVDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG-------- 726 (854)
Q Consensus 664 ~~~~vkl~DFGla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~s~~~DVwSlGvvl~elltG-------- 726 (854)
.++.+||+|||+++........ ......||+.|+|||.+.+. .++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999866544322 22345699999999999765 344689999999999999999
Q ss_pred --CcccccccccccccchHHHHHHhhhcCCcccccCccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 727 --QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 727 --~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..||........ ....+.... .... ..+.+... ...+....+.+++.+|++.+|++|||+.||+++|+++
T Consensus 262 ~~~~p~~~~~~~~~--~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 262 DYQLPYYDLVPSDP--SVEEMRKVV-CEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CCCCTTTTTSCSSC--CHHHHHHHH-TTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCccccCcCcc--cHHHHHHHH-HHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 667754432111 122222221 1111 11222111 1345667899999999999999999999999999997
Q ss_pred HH
Q 003039 804 IV 805 (854)
Q Consensus 804 ~~ 805 (854)
..
T Consensus 335 ~~ 336 (342)
T 1b6c_B 335 SQ 336 (342)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 116
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-37 Score=339.30 Aligned_cols=258 Identities=17% Similarity=0.265 Sum_probs=197.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc---cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~---~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL 115 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence 445789999999999999976 6889999998754322 246788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 116 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 116 INGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999853 34688999999999999999999998 99999999999999999999999999997654433
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+..... .. ...
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~-~~--~~~ 257 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAIP-RP--STV 257 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCCC-CG--GGT
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCCC-Cc--ccc
Confidence 33334456899999999999999999999999999999999999999765411 11111111110 00 001
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIVIE 807 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~~~ 807 (854)
.... ...+.+++.+|++.+|++|| +++++++.|++++...
T Consensus 258 ~~~~----~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 258 RPGI----PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp STTC----CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CCCC----CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 1112 23578899999999999999 9999999999876544
No 117
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=352.85 Aligned_cols=248 Identities=24% Similarity=0.324 Sum_probs=199.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++|+.++||||+++++++...+..++||||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~ 96 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 446789999999999999877 58899999986432 23346788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 97 LLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 999999999853 45688999999999999999999998 9999999999999999999999999999865433
Q ss_pred CceeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 684 SHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~---~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ...+.... .....
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~~~----~~~~~----- 237 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVHTF----ETTVV----- 237 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-HHHHHHHH----HHCCC-----
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-HHHHHHHH----hhccc-----
Confidence 22345679999999999974 458999999999999999999999997543211 11222211 11110
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-ISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-m~eV~~~ 799 (854)
.++......+.+++.+|++.+|++||+ +.+|.+|
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 011112245889999999999999998 7777654
No 118
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.2e-38 Score=351.65 Aligned_cols=246 Identities=24% Similarity=0.298 Sum_probs=199.8
Q ss_pred HHhhccccccCceEEEEEEECC-CcEEEEEEEccCC---cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~-~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|+.+. ++.||||+++... ......+..|..++..+ +||||+++++++...+..++|||
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E 101 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence 3456889999999999999874 7889999997542 23345678899999988 89999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 102 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999853 34688999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+ ... .+.. .
T Consensus 175 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----~~~~---~i~-~~~~------~ 239 (353)
T 2i0e_A 175 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQ---SIM-EHNV------A 239 (353)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH---HHH-HCCC------C
T ss_pred -CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH----HHHH---HHH-hCCC------C
Confidence 22334567999999999999999999999999999999999999999765421 1111 111 1111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++||+ ++||.+|
T Consensus 240 ~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 YPKSM----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCTTS----CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCCC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11122 245789999999999999995 5788776
No 119
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.9e-39 Score=375.63 Aligned_cols=253 Identities=25% Similarity=0.431 Sum_probs=206.2
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.+.++||+|+||.||+|+++++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+++|
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g 346 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG 346 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence 44678999999999999999988899999997654 345689999999999999999999999976 6789999999999
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 347 sL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 347 SLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp EHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred cHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 999999632 234588999999999999999999998 999999999999999999999999999986543221122
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.. .+..+... .
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----~~~~----~i~~~~~~---------~ 484 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLD----QVERGYRM---------P 484 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH----HHHH----HHHTTCCC---------C
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCCC---------C
Confidence 23446789999999999999999999999999999999 99999764411 1222 12222110 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+|+.+|++.+|++|||+.+|++.|+.+.
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11122346889999999999999999999999999865
No 120
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=357.76 Aligned_cols=251 Identities=23% Similarity=0.260 Sum_probs=200.3
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||||+++... ......+.+|..++..++||||+++++++.+.+..++||||+
T Consensus 64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~ 143 (412)
T 2vd5_A 64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYY 143 (412)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCC
Confidence 34578999999999999986 68999999996432 122345788999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 144 ~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 144 VGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999999532 34688999999999999999999998 999999999999999999999999999986654443
Q ss_pred ceeecccccccccCccccc-------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 685 HVSSIVRGTVGYLDPEYYI-------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-------~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+... -..
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~----~~~-- 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH----LSL-- 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----CCC--
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC----cCC--
Confidence 3444567999999999997 357899999999999999999999999765532222222221110 001
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR---PSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Psm~eV~~~ 799 (854)
+......+ .++.+++.+|+. +|++| |+++||.+|
T Consensus 292 ---p~~~~~~s----~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ---PLVDEGVP----EEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---C----CCC----HHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---CccccCCC----HHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111122 357899999999 99988 699999876
No 121
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.7e-38 Score=338.70 Aligned_cols=258 Identities=27% Similarity=0.406 Sum_probs=204.9
Q ss_pred Hhhc-cccccCceEEEEEEEC---CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 529 MLEK-KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~-~iG~G~fg~Vy~a~~~---~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.+.+ .||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 97 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVME 97 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEE
Confidence 3445 8999999999999653 468899999975432 2356789999999999999999999999 5677899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 98 MAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp CCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999953 34588999999999999999999998 9999999999999999999999999999866544
Q ss_pred CCcee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 683 ASHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~~~--~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
..... ....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.. .+..+....
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~----~~~~~~~~~-- 240 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVTA----MLEKGERMG-- 240 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHH----HHHTTCCCC--
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHH----HHHcCCCCC--
Confidence 33222 22346789999999998889999999999999999999 99999765421 1222 122221111
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREAA 811 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~~~~ 811 (854)
. +......+.+++.+|++.+|++||++.||++.|+++........
T Consensus 241 ---~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 241 ---C----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp ---C----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 1 11223468899999999999999999999999999987765544
No 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-38 Score=364.69 Aligned_cols=246 Identities=23% Similarity=0.315 Sum_probs=192.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccC---CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~---~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|+.. +|+.||||++... .......+.+|+++++.++||||+++++++...+..++||||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 229 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence 445789999999999999876 6899999999753 223345677899999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 230 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 230 ANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 999999998843 4568899999999999999999998 7 9999999999999999999999999999754332
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+ . .+.. .
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i---~-~~~~------~ 367 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELI---L-MEEI------R 367 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH---H-HCCC------C
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHH---H-hCCC------C
Confidence 2 2234467999999999999999999999999999999999999999765421 111111 1 1111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
+.... ...+.+++.+|++.||++|| +++|+++|
T Consensus 368 ~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 FPRTL----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCccC----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 11112 23578999999999999999 99999986
No 123
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=349.18 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=197.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCc----EEEEEEEccC-CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~----~VAvK~l~~~-~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
+.+.+.||+|+||.||+|++. +++ +||+|.+... .......+.+|+.++++++||||+++++++.... .++|+
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEE
Confidence 445689999999999999875 344 3577777543 3445678999999999999999999999998765 78999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 96 QLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp CCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999998642 34688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 682 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.... ..+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~----~~~~~~--- 238 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSIL----EKGERL--- 238 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH----HTTCCC---
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHHH----HcCCCC---
Confidence 3222 2233457889999999999999999999999999999999 99999765422 222221 111110
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+......+.+++.+|++.+|++||++.||++.|+++...
T Consensus 239 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 ------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01111223588999999999999999999999999998654
No 124
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=344.20 Aligned_cols=268 Identities=22% Similarity=0.288 Sum_probs=198.2
Q ss_pred HHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-----cccHHHHHHHHHHHccCC---CCceeeEeeeeee
Q 003039 523 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIH---HRNLVQFLGYCQE 593 (854)
Q Consensus 523 ~~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-----~~~~~~~~~Ev~~L~~l~---HpnIv~l~g~~~~ 593 (854)
+....|.+.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 34445667889999999999999974 68999999986432 112346777888877775 9999999999977
Q ss_pred cC-----eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcE
Q 003039 594 EG-----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 594 ~~-----~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 668 (854)
.. ..++||||+. |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 65 5799999997 5999998643 233489999999999999999999998 99999999999999999999
Q ss_pred EEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH
Q 003039 669 KVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 669 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~ 748 (854)
||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+......
T Consensus 160 kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 160 KLADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237 (308)
T ss_dssp EECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999765432 2234456899999999999999999999999999999999999999765422211111111100
Q ss_pred hhhcCCccccc---Ccccc--CcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 749 HIESGDIQGII---DPSLL--DEY-----DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~~~~~i---d~~l~--~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ......... ...+. ... ..+....+.+++.+|++.||++|||+.|+++|
T Consensus 238 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 P-PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp C-CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C-ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0 000000000 00000 000 01122467899999999999999999999876
No 125
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.7e-38 Score=341.05 Aligned_cols=261 Identities=32% Similarity=0.546 Sum_probs=194.5
Q ss_pred HHHHHHHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 523 IEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 523 ~~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
+....+.+.++||+|+||.||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++ .....++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 33444566789999999999999865 469999997543 23346789999999999999999999966 45568999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+++++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 999999999999853 245688999999999999999999998 99999999999999999999999999997544
Q ss_pred CCC-CceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 681 DGA-SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 681 ~~~-~~~~~~~~gt~~Y~aPE~~~---~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||...... ..+... ...+...
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~----~~~~~~~ 244 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEM----VGRGSLS 244 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHH----HHHTSCC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHH----hcccccC
Confidence 321 22233456999999999986 567888999999999999999999999764311 112221 2222221
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
..+. .+... ....+.+++.+|++.+|++||++.||++.|+++.
T Consensus 245 ~~~~-~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 PDLS-KVRSN----CPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCTT-SSCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cchh-hcccc----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1111 11112 2346889999999999999999999999999864
No 126
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=350.46 Aligned_cols=254 Identities=25% Similarity=0.324 Sum_probs=186.4
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CCceeeEeeeee--------ecCe
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQ--------EEGR 596 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~--------~~~~ 596 (854)
.+.+.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 3456789999999999999975 68999999987666666778899999999996 999999999984 3445
Q ss_pred EEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEcCCCcEEEEeee
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~vkl~DFG 674 (854)
.++||||+. |+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred EEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 799999996 79999885432 344689999999999999999999998 7 9999999999999999999999999
Q ss_pred ccccccCCCCce-----------eecccccccccCcccc---ccCcCCCcchhhhHHHHHHHHHhCCccccccccccccc
Q 003039 675 LSKFAVDGASHV-----------SSIVRGTVGYLDPEYY---ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 740 (854)
Q Consensus 675 la~~~~~~~~~~-----------~~~~~gt~~Y~aPE~~---~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~ 740 (854)
+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 998654332211 1134589999999998 5667889999999999999999999999754311
Q ss_pred chHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 741 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 741 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+.. +.... ...... ...+.+++.+|++.+|++||++.|++++|+.+..
T Consensus 260 ~~~~--------~~~~~----~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 RIVN--------GKYSI----PPHDTQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp --------------CCC----CTTCCS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhhc--------CcccC----Cccccc----chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1100 00000 000111 1236789999999999999999999999998764
No 127
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=347.74 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=185.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
+.+.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 445789999999999999987 57899999997543 345688999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeeeccccccCCC
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkl~DFGla~~~~~~~ 683 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 133 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 133 GELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999998853 34588999999999999999999998 9999999999999975 889999999999765432
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+.. .+..+... .. ...
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~----~i~~~~~~-~~-~~~ 274 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFR----RILNCEYY-FI-SPW 274 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHH----HHHTTCCC-CC-TTT
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHH----HHHhCCCc-cC-Cch
Confidence 22234569999999999999999999999999999999999999996543111 1111 11111110 00 111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.||++|||+.|++++
T Consensus 275 ~~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDEV----SLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122 2457899999999999999999999875
No 128
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=373.57 Aligned_cols=250 Identities=26% Similarity=0.415 Sum_probs=200.4
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 533 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 533 ~iG~G~fg~Vy~a~~~---~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
.||+|+||.||+|.++ ++..||||+++... ....+.+.+|+++|++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 46679999997653 3356789999999999999999999999976 56899999999999
Q ss_pred HHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCcee-
Q 003039 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS- 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~- 687 (854)
|.+++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 9999953 245689999999999999999999998 999999999999999999999999999986543322211
Q ss_pred -ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccC
Q 003039 688 -SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 688 -~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.. .+..+...
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~~----~i~~~~~~--------- 558 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMA----FIEQGKRM--------- 558 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----HHHH----HHHTTCCC---------
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHH----HHHcCCCC---------
Confidence 22345789999999999999999999999999999998 99999765421 2222 22222111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+......+.+++.+|++.+|++||++.+|++.|+.+...
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11112334688999999999999999999999999997653
No 129
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.6e-38 Score=352.86 Aligned_cols=271 Identities=18% Similarity=0.252 Sum_probs=202.5
Q ss_pred HHhhcccccc--CceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G--~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
|.+.++||+| +||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 4567899999 99999999987 68999999997543 2334668889999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 107 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 107 FMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp CCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred ccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999998643 234588999999999999999999998 9999999999999999999999999998643221
Q ss_pred C------CceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-hh--
Q 003039 683 A------SHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-IE-- 751 (854)
Q Consensus 683 ~------~~~~~~~~gt~~Y~aPE~~~~--~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-~~-- 751 (854)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||................... ..
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 1 111223468999999999987 679999999999999999999999997644222111110000000 00
Q ss_pred ----------------cCCcccccCccc---------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 003039 752 ----------------SGDIQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDA 803 (854)
Q Consensus 752 ----------------~~~~~~~id~~l---------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~ 803 (854)
.....+.+.... ...........+.+|+.+|++.||++|||+.|+++| ++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 000000000000 000111223468899999999999999999999987 5544
No 130
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-37 Score=336.18 Aligned_cols=261 Identities=22% Similarity=0.320 Sum_probs=203.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeee-eecCeEEEEEEec
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~-~~~~~~~LV~E~~ 604 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+|+++++.++|++++..++++ ...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 4556789999999999999874 688999998764432 24578899999999988777666655 6677889999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccccccC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~~~~~ 681 (854)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 88 -~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 88 -GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp -CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999998532 34589999999999999999999998 99999999999999 7889999999999986554
Q ss_pred CCCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003039 682 GASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 682 ~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.......... ..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hh
Confidence 3321 2234569999999999999999999999999999999999999998755333322222222222111 00
Q ss_pred ccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+.+...+ ...+.+++..|++.+|++||++.||++.|++++..
T Consensus 240 -----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 240 -----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp -----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0001112 24688999999999999999999999999998754
No 131
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=341.71 Aligned_cols=263 Identities=22% Similarity=0.291 Sum_probs=195.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
.+.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 85 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCC
Confidence 45688999999999999986 589999999865432 224668899999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 86 HTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp EEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 9999888742 34588999999999999999999998 999999999999999999999999999976543322
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HHhhhcCCc-c
Q 003039 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHIESGDI-Q 756 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~~~~~~~~-~ 756 (854)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+.... ......... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 2234468999999999976 678999999999999999999999997654221111111100 000000000 0
Q ss_pred --cccCccccCcC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 --GIIDPSLLDEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 --~~id~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.++.-.... .......+.+++.+|++.+|++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00011000000 01123457899999999999999999999986
No 132
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.4e-38 Score=356.56 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=193.7
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCC--CCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~--HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|+++|++++ ||||+++++++...+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 45678999999999999998889999999987543 234567899999999996 5999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+.+++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 678899999853 34678888999999999999999998 999999999999995 5899999999998654432
Q ss_pred Cc-eeecccccccccCcccccc-----------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003039 684 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 684 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~~~~~ 282 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIID 282 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh------HHHHHHHHHhC
Confidence 22 2344579999999999865 368889999999999999999999996532 11111111111
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.....++......+.+++.+|++.+|++||++.||+++
T Consensus 283 ---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 283 ---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111111111112357899999999999999999999976
No 133
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-38 Score=352.50 Aligned_cols=254 Identities=30% Similarity=0.495 Sum_probs=192.8
Q ss_pred HhhccccccCceEEEEEEEC--CC--cEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeee-cCeEEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK--DG--KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~--~~--~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~-~~~~~LV~E 602 (854)
.+.+.||+|+||.||+|++. ++ ..||||+++... ....+.+.+|+.++++++||||++++++|.. ++..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 34578999999999999864 22 368999986543 3445779999999999999999999998754 567899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 172 YMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999953 234578889999999999999999998 9999999999999999999999999999855432
Q ss_pred CCc---eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003039 683 ASH---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 ~~~---~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.... ..+.. .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~~~----~~~~~--~ 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYL----LQGRR--L 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHHHH----HTTCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHHHH----HcCCC--C
Confidence 211 1233457889999999999999999999999999999999 67777654421 222221 11111 0
Q ss_pred cCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+ . .....+.+++.+|++.+|++||++.||+++|++++.
T Consensus 316 ~~p---~----~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 316 LQP---E----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp CCC---T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC---C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 1 122358899999999999999999999999999865
No 134
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.1e-38 Score=339.36 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=198.5
Q ss_pred HhhccccccCceEEEEEEECC----CcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeee-ecCeEEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~----~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~-~~~~~~LV~E 602 (854)
.+.+.||+|+||.||+|++.+ ...||+|++.... ......+.+|+.++++++||||+++++++. .++..++|||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 107 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 107 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence 456889999999999998653 2358999987543 334567899999999999999999999864 4567899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 108 YMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999953 245578889999999999999999998 9999999999999999999999999999755432
Q ss_pred CC---ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003039 683 AS---HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 ~~---~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.. .......||+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+..... .+.. .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~~~----~~~~--~ 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYLL----QGRR--L 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THHHHHH----TTCC--C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHHHHHh----cCCC--C
Confidence 21 12233457889999999999999999999999999999999 55566543311 1222111 1110 0
Q ss_pred cCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+ ... ...+.+++.+|++.+|++||++.|+++.|++++.
T Consensus 252 ~~~---~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 LQP---EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp CCC---TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC---ccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 001 111 2358899999999999999999999999999865
No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.4e-38 Score=347.17 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=192.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc---cHHHHHHHHHHHccCCCCceeeEeeeeeecCe----EEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR----SVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~---~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~----~~L 599 (854)
|.+.+.||+|+||.||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++..... .++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 456789999999999999974 6889999999765322 23568899999999999999999999876543 499
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 9999999999999853 34688999999999999999999998 9999999999999999999999999999765
Q ss_pred cCCCCc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~ 239 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIPP 239 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCCH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCCc
Confidence 433221 223356899999999999999999999999999999999999999765411 11111122111110
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLK-DIQDA 803 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~-~L~~~ 803 (854)
....... ...+.+++.+|++.+|++||++.++++ .|...
T Consensus 240 ---~~~~~~~----~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 240 ---SARHEGL----SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ---HHHSTTC----CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ---ccccCCC----CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0001111 235789999999999999997666554 45443
No 136
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.9e-37 Score=334.77 Aligned_cols=260 Identities=22% Similarity=0.325 Sum_probs=203.9
Q ss_pred HHhhccccccCceEEEEEEE-CCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeee-eecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~-~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~-~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.++++++|++++..++++ ...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 34568899999999999997 4789999999875432 34688999999999988876666655 5667889999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccccccCC
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~~~~~~ 682 (854)
+++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 9999999853 234689999999999999999999998 99999999999999 48899999999999865543
Q ss_pred CCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 683 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 683 ~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.......... ..
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-ch-
Confidence 321 1234569999999999999999999999999999999999999998654322222222222211111 00
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+.+...++ ..+.+++.+|++.+|++||++.||++.|+++...
T Consensus 240 ----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 ----EVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp ----HHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 00111222 4588999999999999999999999999998653
No 137
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-39 Score=350.54 Aligned_cols=258 Identities=23% Similarity=0.399 Sum_probs=186.1
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHcc--CCCCceeeEeeeeeecC----eEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG----RSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~--l~HpnIv~l~g~~~~~~----~~~LV~ 601 (854)
+.+.+.||+|+||.||+|++. ++.||||++... ....+..|.+++.. ++||||+++++++.... ..++||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 446789999999999999876 899999998643 34567778888877 79999999999998876 789999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH--------hCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDIkp~NILl~~~~~vkl~DF 673 (854)
||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 81 e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp ECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred eccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999943 35788889999999999999999 66 9999999999999999999999999
Q ss_pred eccccccCCCCce---eecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC----------Cccccccc
Q 003039 674 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 734 (854)
Q Consensus 674 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~~DVwSlGvvl~elltG----------~~pf~~~~ 734 (854)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433321 2334699999999999776 445689999999999999999 55554322
Q ss_pred ccc-cccchHHHHHHhhhcCCcccccCccccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 735 FGA-NCRNIVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 735 ~~~-~~~~l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
... ....+... ..... ..+.+... ...+....+.+++.+|++.+|++|||+.||++.|+++..
T Consensus 233 ~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 233 PSDPSVEEMRKV----VCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp C-CCCCC-CHHH----HTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCccHHHHHHH----HHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 111 11111111 11111 11111111 123566789999999999999999999999999998754
No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=344.95 Aligned_cols=268 Identities=23% Similarity=0.379 Sum_probs=194.3
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHH--HHHHHccCCCCceeeEeeeeee-----cCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTN--EVTLLSRIHHRNLVQFLGYCQE-----EGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~--Ev~~L~~l~HpnIv~l~g~~~~-----~~~~~LV 600 (854)
+.+.+.||+|+||.||+|+.. ++.||||++.... ...+.. |+..+..++||||+++++++.. ....++|
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hheeeecccCCCeEEEEEEEC-CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 345689999999999999874 8999999986432 233444 4444556899999999986532 3367899
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC------CCceecCCCCCCCEEEcCCCcEEEEeee
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------VPAIIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDIkp~NILl~~~~~vkl~DFG 674 (854)
|||+++|+|.+++.. ...++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999943 33478889999999999999999863 2389999999999999999999999999
Q ss_pred ccccccCCC-------CceeecccccccccCcccccc-------CcCCCcchhhhHHHHHHHHHhCCccccccccccccc
Q 003039 675 LSKFAVDGA-------SHVSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 740 (854)
Q Consensus 675 la~~~~~~~-------~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~ 740 (854)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 997654321 112234469999999999986 466789999999999999999987764322111111
Q ss_pred -chH---------HHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 741 -NIV---------QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 741 -~l~---------~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+. ...............+.+... ........+.+++.+|++.+|++|||+.||++.|++++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 111 011111111111111111111 1223556799999999999999999999999999998754
No 139
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-37 Score=333.68 Aligned_cols=251 Identities=28% Similarity=0.434 Sum_probs=204.3
Q ss_pred HHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeee--------
Q 003039 523 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-------- 593 (854)
Q Consensus 523 ~~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~-------- 593 (854)
.....+.+.+.||+|+||.||+|+.. +++.||||++.... ..+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 34445666789999999999999987 78999999997543 356789999999999999999998854
Q ss_pred --------cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC
Q 003039 594 --------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 594 --------~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
....++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 45579999999999999999643 235688999999999999999999998 99999999999999999
Q ss_pred CcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH
Q 003039 666 MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 666 ~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~ 745 (854)
+.+||+|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|..|+.... ...
T Consensus 159 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~-- 228 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFF-- 228 (284)
T ss_dssp TEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHH--
T ss_pred CCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHH--
Confidence 999999999997654432 2233468999999999999999999999999999999999998875321 111
Q ss_pred HHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 746 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 746 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.....+.+. ..++ ..+.+++.+|++.+|++||++.|++++|+.+...
T Consensus 229 --~~~~~~~~~--------~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 229 --TDLRDGIIS--------DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp --HHHHTTCCC--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred --HHhhccccc--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 111222221 1222 3477899999999999999999999999987543
No 140
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.3e-38 Score=345.60 Aligned_cols=256 Identities=27% Similarity=0.431 Sum_probs=201.9
Q ss_pred HHhhccccccCceEEEEEEEC-CCcE--EEEEEEccC-CcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKE--IAVKVLTSN-SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~--VAvK~l~~~-~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|+.. ++.. ||||+++.. .....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 106 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 106 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEe
Confidence 446789999999999999875 4554 499988753 233456789999999999 89999999999999999999999
Q ss_pred eccCCCHHhhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEE
Q 003039 603 FMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl 670 (854)
|+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEE
Confidence 999999999996532 2234689999999999999999999998 9999999999999999999999
Q ss_pred EeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003039 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
+|||+++..... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+ ...
T Consensus 184 ~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~----~~~ 253 (327)
T 1fvr_A 184 ADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----EL----YEK 253 (327)
T ss_dssp CCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HH----HHH
T ss_pred cccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH----HH----HHH
Confidence 999998743211 11223357889999999998889999999999999999998 99999765421 11 111
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+..+.. ...... ....+.+++.+|++.+|++||++.|++++|++++.
T Consensus 254 ~~~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 254 LPQGYR-----LEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GGGTCC-----CCCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCC-----CCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 222210 011111 22458899999999999999999999999999865
No 141
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-38 Score=336.59 Aligned_cols=244 Identities=23% Similarity=0.385 Sum_probs=177.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 345678999999999999865 68999999997542 23356788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+ +++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 95 A-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp C-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred c-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9 6788887743 34688999999999999999999998 99999999999999999999999999997554332
Q ss_pred CceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... .+. ..+..+.. .
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~----~~~~~~~~------~ 230 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP----VLF----KNISNGVY------T 230 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH----HHH----HHHHHTCC------C
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH----HHH----HHHHhCCC------C
Confidence 2233468999999999987765 68999999999999999999999765421 111 11111111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++|||+.|++++
T Consensus 231 ~~~~~----~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 LPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCccC----CHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11112 2357899999999999999999999875
No 142
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.2e-38 Score=375.45 Aligned_cols=249 Identities=27% Similarity=0.425 Sum_probs=199.1
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 532 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~---~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999663 467899999975432 335789999999999999999999999964 568899999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc-
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH- 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~- 685 (854)
|+|.+++. ....+++..++.|+.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999995 345688999999999999999999998 9999999999999999999999999999866443321
Q ss_pred -eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 686 -VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 686 -~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+. ..+..+....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~----~~i~~~~~~~------ 592 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVT----AMLEKGERMG------ 592 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHH----HHHHTTCCCC------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHH----HHHHcCCCCC------
Confidence 2233457889999999999999999999999999999998 99999765421 111 2222222111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+......+.+++..|++.+|++||++.+|++.|+++..
T Consensus 593 ---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 ---CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 111223468899999999999999999999999998754
No 143
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=351.69 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=200.7
Q ss_pred HHhhccccccCceEEEEEEE----CCCcEEEEEEEccCC----cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~----~~~~~VAvK~l~~~~----~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
+.+.+.||+|+||.||+|+. .+++.||||+++... ......+.+|+++++++ +||||+++++++...+..+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 45678999999999999987 368999999986532 12345677899999999 6999999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 136 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999999853 34688999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+. .......
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~--- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS---RRILKSE--- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH---HHHHHCC---
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH---HHHhccC---
Confidence 54433334445679999999999985 457899999999999999999999997544222221222 2211111
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKDI 800 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~L 800 (854)
+...... ...+.+++.+|++.||++|| +++|++++.
T Consensus 283 ----~~~~~~~----~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PPYPQEM----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CCCCccc----CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1111122 23578999999999999999 999999875
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.2e-37 Score=334.54 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=200.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 345688999999999999876 58899999986543 233467889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeeeccccccC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---vkl~DFGla~~~~~ 681 (854)
++|+|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 88 ~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 88 TGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999988843 35688999999999999999999998 9999999999999987655 99999999976543
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+... +..+.... ..+
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~----~~~~~~~~-~~~ 229 (284)
T 3kk8_A 161 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQ----IKAGAYDY-PSP 229 (284)
T ss_dssp SC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCCC-CTT
T ss_pred Cc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh----HHHHH----HHhccccC-Cch
Confidence 32 223456999999999999999999999999999999999999999764411 11111 11111110 000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.+|++|||+.|++++
T Consensus 230 -~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 -EWDTV----TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TTTTS----CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hhccc----CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 01112 2357899999999999999999999885
No 145
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=344.50 Aligned_cols=251 Identities=18% Similarity=0.165 Sum_probs=202.3
Q ss_pred HHhhccccccCceEEEEEE------ECCCcEEEEEEEccCCcccHHHHHHHHHHHccCC---CCceeeEeeeeeecCeEE
Q 003039 528 KMLEKKIGSGGFGVVYYGK------LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~------~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~---HpnIv~l~g~~~~~~~~~ 598 (854)
+.+.+.||+|+||+||+|. ..+++.||||+++.. ...++..|++++++++ |+||+++++++...+..+
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 4456889999999999994 346889999999754 3456777888877776 999999999999999999
Q ss_pred EEEEeccCCCHHhhhccccc-ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-----------CC
Q 003039 599 LVYEFMHNGTLKEHLYGTLT-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----------HM 666 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-----------~~ 666 (854)
+||||+++|+|.+++..... ....+++..++.|+.|++.||+|||+. +|+||||||+|||++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999964322 345699999999999999999999998 9999999999999998 89
Q ss_pred cEEEEeeeccccccC-CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH
Q 003039 667 RAKVSDFGLSKFAVD-GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 667 ~vkl~DFGla~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~ 745 (854)
.+||+|||+|+.... ..........||++|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------- 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------- 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-------
Confidence 999999999975432 223344556799999999999999999999999999999999999999965431110
Q ss_pred HHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHHHHHH
Q 003039 746 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR-PSISEVLKDIQDAIVI 806 (854)
Q Consensus 746 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Psm~eV~~~L~~~~~~ 806 (854)
.++..+..... ...+.+++..|++.+|.+| |++.++.+.|++.+..
T Consensus 294 ------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 ------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------------eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 01111111111 2346688889999999988 6889999999988754
No 146
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.1e-38 Score=336.18 Aligned_cols=244 Identities=25% Similarity=0.405 Sum_probs=197.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 345688999999999999876 57789999986432 22356788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 91 APLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 999999998853 34688999999999999999999998 9999999999999999999999999998644322
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ... .+..... .+
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~----~~~~~~~------~~ 226 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE----TYK----RISRVEF------TF 226 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH----HHHHTCC------CC
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH----HHH----HHHhCCC------CC
Confidence 2234468999999999999999999999999999999999999997654211 111 1111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.+|++||++.||++|
T Consensus 227 ~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PDF----VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CTT----SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCc----CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111 22357899999999999999999999987
No 147
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=337.29 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=200.0
Q ss_pred hccccccCceEEEEEEECC----CcEEEEEEEccCCc-ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeE-EEEEEec
Q 003039 531 EKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-VLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~~----~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~-~LV~E~~ 604 (854)
.++||+|+||+||+|.+.+ +..||+|++..... ...+.+.+|++++++++||||+++++++...+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 4789999999999998642 23799999875432 3456788999999999999999999999776655 9999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC-
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA- 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~- 683 (854)
.+|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 106 CHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp TTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred cCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 99999999964 245678899999999999999999998 99999999999999999999999999997543321
Q ss_pred --CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 684 --SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 684 --~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
........+|+.|+|||.+.+..++.++|||||||++|||++|..|+..... ...+..... .+...
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~---~~~~~~~~~----~~~~~----- 247 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID---PFDLTHFLA----QGRRL----- 247 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC---GGGHHHHHH----TTCCC-----
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC---HHHHHHHhh----cCCCC-----
Confidence 1122334578999999999999999999999999999999996655432221 112222211 11100
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..... ....+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 248 ~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 248 PQPEY----CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcc----chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00111 123588999999999999999999999999998653
No 148
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-37 Score=338.70 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=200.7
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
..+.+.+.||+|+||.||+|+.. +|+.||+|+++.........+.+|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 35566789999999999999986 68999999998655445567899999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccccccC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~~~~~ 681 (854)
++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 89 SGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999998843 34688899999999999999999998 99999999999999 7889999999999875432
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.. .+..+... ...
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~----~i~~~~~~--~~~ 228 (304)
T 2jam_A 162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFE----KIKEGYYE--FES 228 (304)
T ss_dssp B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH----HHHHCCCC--CCT
T ss_pred C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHcCCCC--CCc
Confidence 2 223346899999999999999999999999999999999999999754411 1111 11222110 111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...... ...+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 PFWDDI----SESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTTS----CHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111222 2458899999999999999999999875
No 149
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4e-37 Score=335.81 Aligned_cols=256 Identities=23% Similarity=0.322 Sum_probs=195.5
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
.+.||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 367999999999999865 6899999999876555677899999999885 79999999999999999999999999999
Q ss_pred HHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeeeccccccCCC--
Q 003039 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVDGA-- 683 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---vkl~DFGla~~~~~~~-- 683 (854)
|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 98 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999853 34688999999999999999999998 9999999999999998776 9999999987543211
Q ss_pred ----CceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccc-------cchHHHHH
Q 003039 684 ----SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-------RNIVQWAK 747 (854)
Q Consensus 684 ----~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~-------~~l~~~~~ 747 (854)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+.. ........
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 111223459999999999875 56889999999999999999999999765421100 00001111
Q ss_pred HhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+..+... +....... ....+.+++.+|++.||++|||+.|+++|
T Consensus 251 ~~i~~~~~~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKYE--FPDKDWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCcc--cCchhccc----CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 122222110 00000011 12458899999999999999999999986
No 150
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.8e-38 Score=343.42 Aligned_cols=261 Identities=21% Similarity=0.296 Sum_probs=203.0
Q ss_pred cCHHHHHHHHHHhh-ccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccC-CCCceeeEeeeee
Q 003039 518 FTLSDIEDATKMLE-KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 592 (854)
Q Consensus 518 ~~~~~~~~~~~~~~-~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~ 592 (854)
+...+.....|.+. +.||+|+||.||+|... +++.||||++.... ......+.+|+.+++++ +||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34344444555554 88999999999999887 58999999987542 33467889999999999 5699999999999
Q ss_pred ecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEE
Q 003039 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAK 669 (854)
Q Consensus 593 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vk 669 (854)
..+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 999999999999999999988542 245688999999999999999999998 9999999999999998 78999
Q ss_pred EEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003039 670 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 670 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~---- 244 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE----TYLN---- 244 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH----HHHH----
Confidence 99999998654322 2233569999999999999999999999999999999999999997654211 1111
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+...... ....... .....+.+++.+|++.+|++|||++|++++
T Consensus 245 i~~~~~~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVNVD--YSEETFS----SVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTCCC--CCTTTTT----TSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhcccc--cCchhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111000 0011111 123457899999999999999999999876
No 151
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-37 Score=334.86 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=200.3
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc------ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~------~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..+.+.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 34566789999999999999987 689999999875422 13577999999999999999999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC----cEEEEeee
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 674 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~vkl~DFG 674 (854)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999843 35688999999999999999999998 999999999999999877 89999999
Q ss_pred ccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .+....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~~~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ----ETLT----NISAVN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHH----HHHTTC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH----HHHH----HhHhcc
Confidence 997654322 223346899999999999999999999999999999999999999764411 1111 111111
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..++...... ...+.+++.+|++.+|++||++.|++++
T Consensus 228 ~--~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 Y--DFDEEYFSNT----SELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCCHHHHTTC----CHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred c--CCcchhcccC----CHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 0111111111 2357899999999999999999999986
No 152
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-38 Score=360.88 Aligned_cols=245 Identities=24% Similarity=0.416 Sum_probs=201.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 446789999999999999987 79999999996432 12345788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 98 VSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999985 345689999999999999999999998 99999999999999999999999999998654432
Q ss_pred CceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+.. .+..+...
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~----~i~~~~~~------ 234 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFK----KICDGIFY------ 234 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHH----HHHTTCCC------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHH----HHhcCCcC------
Confidence 2334579999999999988765 67999999999999999999999765421 1111 11222110
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+ ..+.+++.+|++.||++|||+.||++|
T Consensus 235 ~p~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 TPQYLN----PSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCccCC----HHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011112 357899999999999999999999985
No 153
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.8e-37 Score=347.88 Aligned_cols=246 Identities=22% Similarity=0.251 Sum_probs=188.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHc-cCCCCceeeEeeeeee----cCeEEEEEEecc
Q 003039 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLS-RIHHRNLVQFLGYCQE----EGRSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~-~l~HpnIv~l~g~~~~----~~~~~LV~E~~~ 605 (854)
+.||+|+||+||+|... +++.||||++.. ...+.+|++++. ..+||||+++++++.. .+..++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999886 688999999863 245678888874 4589999999999875 567899999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeeeccccccCC
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkl~DFGla~~~~~~ 682 (854)
+|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 143 GGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp SEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999999642 234689999999999999999999998 9999999999999998 789999999999855432
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+ ..+.... -.+
T Consensus 218 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~~~~~~~-~~~- 289 (400)
T 1nxk_A 218 --NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEF-PNP- 289 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----HHTCCCC-CTT-
T ss_pred --CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----HcCcccC-CCc-
Confidence 22234568999999999999999999999999999999999999997654222222222221 1121110 000
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.||++|||+.||++|
T Consensus 290 ~~~~~----s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEV----SEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01112 2457899999999999999999999987
No 154
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.7e-38 Score=351.60 Aligned_cols=242 Identities=25% Similarity=0.319 Sum_probs=188.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---ccHHHHHHHHHH-HccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---~~~~~~~~Ev~~-L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++.... .....+..|..+ ++.++||||+++++++...+..++|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 456789999999999999987 578999999975532 223455667776 577899999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 120 YINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999853 45678888999999999999999998 9999999999999999999999999999854332
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.. ... .+.. .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~---~i~-~~~~------~ 257 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYD---NIL-NKPL------Q 257 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH----HHH---HHH-HSCC------C
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH----HHH---HHH-hccc------C
Confidence 2 23345679999999999999999999999999999999999999997654221 111 111 1111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
+....+ ..+.+++.+|++.+|++||++.+
T Consensus 258 ~~~~~~----~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 258 LKPNIT----NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CCSSSC----HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCCCC----HHHHHHHHHHcccCHHhCCCCCC
Confidence 111222 35789999999999999999853
No 155
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.3e-38 Score=346.60 Aligned_cols=260 Identities=24% Similarity=0.413 Sum_probs=207.0
Q ss_pred HHHhhccccccCceEEEEEEEC------CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~L 599 (854)
.+.+.+.||+|+||.||+|++. .++.||||++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 3456789999999999999765 36789999987543 2334568899999999999999999999999999999
Q ss_pred EEEeccCCCHHhhhccccc------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 003039 600 VYEFMHNGTLKEHLYGTLT------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DF 673 (854)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Df 182 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 182 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcC
Confidence 9999999999999864321 113468889999999999999999998 9999999999999999999999999
Q ss_pred eccccccCCCCc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003039 674 GLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.. .+.
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~----~~~ 254 (322)
T 1p4o_A 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVLR----FVM 254 (322)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH----HHHH----HHH
T ss_pred ccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH----HHHH----HHH
Confidence 999755432211 1223356889999999999999999999999999999999 88998754311 1111 112
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+..... .. .....+.+++.+|++.+|++||++.|++++|++++..
T Consensus 255 ~~~~~~~-----~~----~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 255 EGGLLDK-----PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp TTCCCCC-----CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred cCCcCCC-----CC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 2221111 11 1224588999999999999999999999999987653
No 156
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.6e-38 Score=335.40 Aligned_cols=246 Identities=19% Similarity=0.302 Sum_probs=198.1
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
..+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+..+.++ +||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 34556789999999999999987 78999999987542 33456788999999999 9999999999999999999999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC----------------
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---------------- 665 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---------------- 665 (854)
||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999965433345689999999999999999999998 99999999999999844
Q ss_pred ---CcEEEEeeeccccccCCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccc
Q 003039 666 ---MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 741 (854)
Q Consensus 666 ---~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~ 741 (854)
..+||+|||+++...... ...||+.|+|||.+.+. .++.++|||||||++|||++|..++.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~ 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------Q 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------H
T ss_pred CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------H
Confidence 479999999997654322 23489999999999865 56689999999999999999988764322 1
Q ss_pred hHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..+..+... .+....+ ..+.+++.+|++.+|++|||+.|+++|
T Consensus 237 ~-----~~~~~~~~~-----~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 W-----HEIRQGRLP-----RIPQVLS----QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp H-----HHHHTTCCC-----CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H-----HHHHcCCCC-----CCCcccC----HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1 111222221 1112222 357899999999999999999999876
No 157
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=348.08 Aligned_cols=263 Identities=27% Similarity=0.413 Sum_probs=206.6
Q ss_pred HHhhccccccCceEEEEEEE-----CCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecC--eEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~-----~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~--~~~LV 600 (854)
+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 45678999999999999984 368899999998766566678999999999999999999999986644 78999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 123 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp ECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999642 34588999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCCce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc------c--ccccchHHHHHHhh
Q 003039 681 DGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF------G--ANCRNIVQWAKLHI 750 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~------~--~~~~~l~~~~~~~~ 750 (854)
...... .....++..|+|||.+.+..++.++|||||||++|||++|..|+..... . .............+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 433221 2234577889999999988899999999999999999999998864310 0 00001111111222
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+... ..+......+.+++.+|++.+|++||++.||++.|+++..
T Consensus 277 ~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 277 KNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 221110 0111223468899999999999999999999999999864
No 158
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.8e-38 Score=342.13 Aligned_cols=260 Identities=27% Similarity=0.417 Sum_probs=196.5
Q ss_pred HHHhhccccccCceEEEEEEEC----CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecC-----
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----- 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~----~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~----- 595 (854)
.+.+.+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 114 (313)
T 3brb_A 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114 (313)
T ss_dssp GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence 4456788999999999999765 24589999987543 233467889999999999999999999997655
Q ss_pred eEEEEEEeccCCCHHhhhcccc--cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEee
Q 003039 596 RSVLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 596 ~~~LV~E~~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DF 673 (854)
..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSC
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeec
Confidence 3499999999999999985322 2345689999999999999999999998 9999999999999999999999999
Q ss_pred eccccccCCCC-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003039 674 GLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~---- 263 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMYDYLL---- 263 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHH----
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHHHHH----
Confidence 99976543322 12233457889999999999999999999999999999999 88998765421 2222111
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+... ..... ....+.+++.+|++.+|++||++.+|+++|++++..
T Consensus 264 ~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 HGHRL-----KQPED----CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp TTCCC-----CCBTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCC-----CCCcc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 11111 224688999999999999999999999999998653
No 159
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=332.98 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=179.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 345688999999999999874 68999999986432 12246788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 93 CHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred CCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999998632 35688999999999999999999998 99999999999999999999999999997654322
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........... . ... +..+
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------~-~~~------~~~~ 231 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK-------V-VLA------DYEM 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------C-CSS------CCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH-------H-hhc------ccCC
Confidence 1 22335689999999999998999999999999999999999999976542211100 0 000 0111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++||++.|++++
T Consensus 232 ~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 PSFL----SIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccc----CHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1112 2357899999999999999999999875
No 160
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.9e-38 Score=336.09 Aligned_cols=249 Identities=30% Similarity=0.460 Sum_probs=195.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeec-CeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-GRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~-~~~~LV~E~~~~ 606 (854)
+.+.+.||+|+||.||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++... +..++||||+++
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 99 (278)
T 1byg_A 23 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 99 (278)
T ss_dssp EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred ceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence 446789999999999999986 8999999987543 456789999999999999999999997554 578999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 170 (278)
T 1byg_A 100 GSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 170 (278)
T ss_dssp EEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence 9999998532 123478889999999999999999998 9999999999999999999999999998754322
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCccccC
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.. .....
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~~~ 237 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR----VEKGYK-----MDAPD 237 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GHHHH----HTTTCC-----CCCCT
T ss_pred ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HhcCCC-----CCCcc
Confidence 123357889999999999999999999999999999998 99999765421 22211 111111 11111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
. ....+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 238 ~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 238 G----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 2 23468899999999999999999999999999754
No 161
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=344.34 Aligned_cols=262 Identities=19% Similarity=0.210 Sum_probs=195.6
Q ss_pred HHHhhccccccCceEEEEEEEC----CCcEEEEEEEccCCcc-----------cHHHHHHHHHHHccCCCCceeeEeeee
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQFLGYC 591 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~----~~~~VAvK~l~~~~~~-----------~~~~~~~Ev~~L~~l~HpnIv~l~g~~ 591 (854)
.|.+.+.||+|+||.||+|... .+..||||++...... ....+.+|+..++.++||||+++++++
T Consensus 38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~ 117 (345)
T 2v62_A 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG 117 (345)
T ss_dssp EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence 4556789999999999999986 5778999998755321 123466788899999999999999999
Q ss_pred ee----cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC-
Q 003039 592 QE----EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM- 666 (854)
Q Consensus 592 ~~----~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~- 666 (854)
.. ....++||||+ +++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 118 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 118 LTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred ccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 87 67899999999 9999999853 33789999999999999999999998 999999999999999887
Q ss_pred -cEEEEeeeccccccCCCC------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003039 667 -RAKVSDFGLSKFAVDGAS------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 667 -~vkl~DFGla~~~~~~~~------~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~ 739 (854)
.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-- 267 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-- 267 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH--
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc--
Confidence 999999999976532211 11134569999999999999999999999999999999999999996532111
Q ss_pred cchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003039 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
............. +...+...... ......+.+++.+|++.+|++||++.+|++.|+++
T Consensus 268 -~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 -VAVQTAKTNLLDE-LPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp -HHHHHHHHHHHHT-TTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred -HHHHHHHHhhccc-ccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1111111111111 11111000000 01223688999999999999999999999999975
No 162
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=344.41 Aligned_cols=241 Identities=24% Similarity=0.350 Sum_probs=198.4
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc--------cHHHHHHHHHHHccCCCCceeeEeeeeeecCe
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~--------~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~ 596 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 34556789999999999999875 6889999999765321 23457789999999999999999999999999
Q ss_pred EEEEEEeccCC-CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeec
Q 003039 597 SVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 597 ~~LV~E~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGl 675 (854)
.++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 99999999777 99998853 44689999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... . .. .
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~-------~~-~- 239 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------T-------VE-A- 239 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G-------TT-T-
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------H-------Hh-h-
Confidence 986544322 233569999999999988776 7899999999999999999999965321 0 00 0
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ .... ...+.+++.+|++.+|++|||+.|++++
T Consensus 240 ---~~~~--~~~~----~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ---AIHP--PYLV----SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCCC--SSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---ccCC--Cccc----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0111 2357899999999999999999999997
No 163
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-37 Score=344.64 Aligned_cols=251 Identities=23% Similarity=0.335 Sum_probs=198.1
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEe
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
..|.+.+.||+|+||.||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 34566789999999999999886 588999999975432 235688888887 799999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC----CcEEEEeeeccccc
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKFA 679 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~----~~vkl~DFGla~~~ 679 (854)
+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+..+ +.+||+|||+++..
T Consensus 98 ~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 98 MKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999998853 34688999999999999999999998 99999999999998543 35999999999865
Q ss_pred cCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+.. .+..+... +
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~----~i~~~~~~--~ 242 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILA----RIGSGKFS--L 242 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-SCHHHHHH----HHHHCCCC--C
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-CCHHHHHH----HHccCCcc--c
Confidence 44322 23345689999999999988899999999999999999999999975321 11112222 22222221 1
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ ...+.+++.+|++.||++||++.|+++|
T Consensus 243 ~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 SGGYWNSV----SDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CSTTTTTS----CHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111122 2457899999999999999999999876
No 164
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.3e-38 Score=347.65 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=196.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc---cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~---~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 445678999999999999874 6899999999754322 235688999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+. |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 136 CL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp CS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred CC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 97 688887743 235688999999999999999999998 9999999999999999999999999999765332
Q ss_pred CceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 684 SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~---~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .......... .....
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-------~~~~~~~~~~-~~~~~- 274 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNE-SPALQ- 274 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC-CCCCC-
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcC-CCCCC-
Confidence 2346999999999985 567899999999999999999999999754311 1111111111 11111
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+ ..+.+++.+|++.+|++|||+.|++++
T Consensus 275 ---~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 ---SGHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCCCC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11122 357889999999999999999999876
No 165
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.8e-38 Score=339.98 Aligned_cols=254 Identities=24% Similarity=0.347 Sum_probs=202.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeee--cCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~--~~~~~LV~E 602 (854)
|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 345688999999999999886 68999999997543 2345678899999999999999999998854 678899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc-----eecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-----IIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
|+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 9999999999975443445589999999999999999999998 6 9999999999999999999999999997
Q ss_pred cccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.. .+..+....
T Consensus 165 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~i~~~~~~~ 235 (279)
T 2w5a_A 165 ILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAG----KIREGKFRR 235 (279)
T ss_dssp HC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCCC
T ss_pred eecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----HHHH----HHhhccccc
Confidence 654322 1223346899999999999989999999999999999999999999765411 1211 222222211
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
+...+ ...+.+++.+|++.+|++||++.||++++..
T Consensus 236 -----~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 236 -----IPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----CCccc----CHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11122 2458899999999999999999999998764
No 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.3e-37 Score=363.52 Aligned_cols=250 Identities=26% Similarity=0.371 Sum_probs=203.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+++|++++||||+++++++.+.+..++||||+
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~ 266 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 266 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence 34678999999999999986 68999999996532 233456889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~- 340 (576)
T 2acx_A 267 NGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340 (576)
T ss_dssp CSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence 999999998643 234588999999999999999999998 99999999999999999999999999998664432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+ .... ..+.
T Consensus 341 -~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i----~~~~------~~~p 409 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV----KEVP------EEYS 409 (576)
T ss_dssp -CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH----HHCC------CCCC
T ss_pred -cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh----hccc------ccCC
Confidence 2234579999999999999999999999999999999999999997654222111222211 1111 0111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
..++ ..+.+++.+|++.||++|| ++.||++|
T Consensus 410 ~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 ERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp TTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1222 3578999999999999999 78999877
No 167
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-37 Score=360.38 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=202.4
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
.+.||+|+||.||+|+.+ +|+.||||++.... ......+..|++++++++||||+++++++...+..++||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 467999999999999986 68999999996542 22345688999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.........+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-K 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-C
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-c
Confidence 999999975544455789999999999999999999998 999999999999999999999999999986544322 2
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCc
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.. ... .+.. .+...
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~---~i~-~~~~------~~p~~ 415 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ---RVL-EQAV------TYPDK 415 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH---HHH-HCCC------CCCTT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH---HHh-hccc------CCCcc
Confidence 2345799999999999999999999999999999999999999976542211112222 111 1111 01112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003039 767 YDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
+ ...+.+++.+|++.+|++||++ .||.+|
T Consensus 416 ~----s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 416 F----SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp S----CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred c----CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 2 2357889999999999999965 667654
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-37 Score=331.98 Aligned_cols=251 Identities=22% Similarity=0.371 Sum_probs=201.2
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
.+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 4556789999999999999986 68999999986443 334577899999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC-
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA- 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~- 683 (854)
++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 88 SGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp TTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred CCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999884 345688999999999999999999998 99999999999999999999999999997543322
Q ss_pred CceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
........||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... ...+..|.. .... ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~----~~~~---~~-- 229 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKE----KKTY---LN-- 229 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT--SHHHHHHHT----TCTT---ST--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHhhh----cccc---cC--
Confidence 122334568999999999987665 77899999999999999999999764411 111222211 1100 00
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.+|++|||+.|++++
T Consensus 230 ~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PWKKI----DSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TGGGS----CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred chhhc----CHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 01112 2357789999999999999999999875
No 169
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-37 Score=348.44 Aligned_cols=260 Identities=25% Similarity=0.367 Sum_probs=187.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccC--CcccHHHHHHHHHHHccCC-CCceeeEeeeeeecC--eEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEG--RSVLV 600 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~--~~~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~~~~--~~~LV 600 (854)
.|.+.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++. ||||+++++++...+ ..++|
T Consensus 10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 3456789999999999999876 6899999998643 2334556788999999997 999999999997544 78999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 90 ~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 90 FDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred ecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99997 589888853 4578888999999999999999998 99999999999999999999999999997543
Q ss_pred CC--------------------CCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003039 681 DG--------------------ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 681 ~~--------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~ 739 (854)
.. .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112234579999999999986 67899999999999999999999999765422111
Q ss_pred cchHHHHHHhhhcCCccc---cc------------------CccccCcCC------------HHHHHHHHHHHHHccCCC
Q 003039 740 RNIVQWAKLHIESGDIQG---II------------------DPSLLDEYD------------IQSMWKIEEKALMCVLPH 786 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~---~i------------------d~~l~~~~~------------~~~~~~l~~l~~~Cl~~~ 786 (854)
..+.. ......... +- .......++ ......+.+|+.+|++.|
T Consensus 241 ~~i~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 241 ERIIG----VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHH----HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHH----hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 11111 100000000 00 000000000 011235789999999999
Q ss_pred CCCCCCHHHHHHH
Q 003039 787 GHMRPSISEVLKD 799 (854)
Q Consensus 787 P~~RPsm~eV~~~ 799 (854)
|++|||++|+++|
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999987
No 170
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.7e-37 Score=342.75 Aligned_cols=199 Identities=27% Similarity=0.372 Sum_probs=171.9
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-----CCceeeEeeeeeecCeEE
Q 003039 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----HRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-----HpnIv~l~g~~~~~~~~~ 598 (854)
...|.+.++||+|+||.||+|+.. +++.||||+++.. ......+..|++++++++ ||||+++++++...+..+
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 345566789999999999999985 6889999999643 233556778999999886 999999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--------------
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------------- 664 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-------------- 664 (854)
+||||+ +++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred EEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccc
Confidence 999999 89999998643 233588899999999999999999998 9999999999999975
Q ss_pred -----------CCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003039 665 -----------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 665 -----------~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~ 733 (854)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999864332 23456899999999999999999999999999999999999999764
Q ss_pred c
Q 003039 734 K 734 (854)
Q Consensus 734 ~ 734 (854)
.
T Consensus 263 ~ 263 (360)
T 3llt_A 263 E 263 (360)
T ss_dssp S
T ss_pred c
Confidence 4
No 171
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.8e-38 Score=344.76 Aligned_cols=264 Identities=22% Similarity=0.342 Sum_probs=197.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 106 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence 445689999999999999987 489999999865432 23456789999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 107 DHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp SEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988763 234588999999999999999999998 99999999999999999999999999997554322
Q ss_pred ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HHhhh-cCCc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHIE-SGDI 755 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~~~~-~~~~ 755 (854)
.......||+.|+|||.+.+. .++.++|||||||++|||++|+.||......+....+.... ...+. ....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 222345689999999999875 78999999999999999999999997654221111111100 00000 0001
Q ss_pred ccccCccccCcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 756 QGIIDPSLLDEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+...... .....+.+++.+|++.||++|||+.|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11111111111111 123568899999999999999999999986
No 172
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.5e-38 Score=344.76 Aligned_cols=261 Identities=18% Similarity=0.222 Sum_probs=189.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc--cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~--~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
.|.+.++||+|+||+||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 3456789999999999999876 6889999998754322 245677999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-----CCCcEEEEeeecccc
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-----KHMRAKVSDFGLSKF 678 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-----~~~~vkl~DFGla~~ 678 (854)
++ |+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 ~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 115 AE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred CC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 98 499998853 34588999999999999999999998 999999999999994 555699999999976
Q ss_pred ccCCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh--cCCc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE--SGDI 755 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~--~~~~ 755 (854)
..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+......... ....
T Consensus 187 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 187 FGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID---QLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTS
T ss_pred cCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH---HHHHHHHHhCCCchhhh
Confidence 54322 222344689999999999874 58999999999999999999999997654211 11111111000 0000
Q ss_pred ccc-----c---CccccCc-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 756 QGI-----I---DPSLLDE-----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~-----i---d~~l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... . .+..... ........+.+++.+|++.||++|||+.|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000 0 0000000 000022467899999999999999999999875
No 173
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-37 Score=331.97 Aligned_cols=246 Identities=21% Similarity=0.345 Sum_probs=201.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 345689999999999999987 57889999986542 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 97 CRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999998742 35688999999999999999999998 99999999999999999999999999997654322
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ . .. .+..+.. .+
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~---~~-~~~~~~~------~~ 234 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----T---YL-RIKKNEY------SI 234 (294)
T ss_dssp -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----H---HH-HHHTTCC------CC
T ss_pred -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----H---HH-HHhhccC------CC
Confidence 22234568999999999999899999999999999999999999997654211 1 11 1111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+ ..+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 PKHIN----PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11222 357889999999999999999999876
No 174
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-36 Score=327.46 Aligned_cols=245 Identities=29% Similarity=0.431 Sum_probs=194.9
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeee----cCeEEEEE
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~----~~~~~LV~ 601 (854)
.+.+.||+|+||.||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.. ....++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 45678999999999999876 57889999987542 3345678899999999999999999999865 35689999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eecCCCCCCCEEEc-CCCcEEEEeeecccc
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLD-KHMRAKVSDFGLSKF 678 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~-~~~~vkl~DFGla~~ 678 (854)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+. + |+||||||+|||++ .++.+||+|||++..
T Consensus 109 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999953 35688899999999999999999998 7 99999999999998 789999999999975
Q ss_pred ccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.... ......||+.|+|||.+. +.++.++|||||||++|||++|+.||.... ........ ...+.....
T Consensus 182 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~-~~~~~~~~~ 250 (290)
T 1t4h_A 182 KRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRR-VTSGVKPAS 250 (290)
T ss_dssp CCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHH-HTTTCCCGG
T ss_pred cccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC------cHHHHHHH-HhccCCccc
Confidence 4332 223456999999999876 458999999999999999999999997543 11111111 111111111
Q ss_pred cCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+ ... ...+.+++..|++.+|++|||+.||++|
T Consensus 251 ~~----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 251 FD----KVA----IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GG----GCC----CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cC----CCC----CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11 111 2358899999999999999999999875
No 175
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=343.12 Aligned_cols=261 Identities=14% Similarity=0.196 Sum_probs=203.3
Q ss_pred HHHhhccccccCceEEEEEEECC---------CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceee-----------
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQ----------- 586 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~~---------~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~----------- 586 (854)
.|.+.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 34567899999999999998864 789999998643 46789999999999999988
Q ss_pred ----Eeeeeee-cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEE
Q 003039 587 ----FLGYCQE-EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 587 ----l~g~~~~-~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
+++++.. .+..++||||+ +++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 5677765 67889999999 99999999643 246789999999999999999999998 9999999999999
Q ss_pred EcCCC--cEEEEeeeccccccCCCCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003039 662 LDKHM--RAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 662 l~~~~--~vkl~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~ 733 (854)
++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999755432111 123346999999999999999999999999999999999999999765
Q ss_pred cccccccchHHHHHHhhhcCCcccccCcccc-CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 734 KFGANCRNIVQWAKLHIESGDIQGIIDPSLL-DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 734 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
... ...+......... ......+.... ...+ ..+.+++.+|++.+|++||++.||++.|++++..
T Consensus 272 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 272 LPN--TEDIMKQKQKFVD--KPGPFVGPCGHWIRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTC--HHHHHHHHHHHHH--SCCCEECTTSCEECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcC--HHHHHHHHHhccC--ChhhhhhhccccCCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 311 1122222221111 11122221111 1112 4588999999999999999999999999998654
No 176
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.6e-37 Score=355.77 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=192.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccC--CcccHHHHHHHHHHHccCCCCceeeEeeeeeec------CeEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~--~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~------~~~~ 598 (854)
|.+.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+|+.++||||+++++++... ...+
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 445788999999999999876 5889999999754 233456788999999999999999999999654 4579
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||++++ |.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 144 lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 144 LVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999864 656553 2378888999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH-------------
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW------------- 745 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~------------- 745 (854)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+....+...
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 5432 2234457999999999999999999999999999999999999999765421111111110
Q ss_pred --HHHhhhcC-C-----cccccCccccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 746 --AKLHIESG-D-----IQGIIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 746 --~~~~~~~~-~-----~~~~id~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ . +...+...+... ........+.+|+.+|++.||++|||++|+++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0 000000000000 011224568899999999999999999999987
No 177
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.3e-38 Score=350.96 Aligned_cols=266 Identities=20% Similarity=0.233 Sum_probs=197.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeec------------
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------------ 594 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~------------ 594 (854)
|.+.+.||+|+||.||+|+.. +|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 456789999999999999875 689999999865432 234799999999999999999998443
Q ss_pred --------------------------CeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCC
Q 003039 595 --------------------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVP 648 (854)
Q Consensus 595 --------------------------~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 648 (854)
...++||||++ |+|.+.+.........+++..+..++.|++.||+|||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 160 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--- 160 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 34789999998 588888876555567799999999999999999999998
Q ss_pred ceecCCCCCCCEEEc-CCCcEEEEeeeccccccCCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhC
Q 003039 649 AIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 649 ~ivHrDIkp~NILl~-~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG 726 (854)
+|+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||++|||++|
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 999999999999998 689999999999986544322 2334689999999998864 589999999999999999999
Q ss_pred CcccccccccccccchHHHHHH-------hh----hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003039 727 QEAISNEKFGANCRNIVQWAKL-------HI----ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 727 ~~pf~~~~~~~~~~~l~~~~~~-------~~----~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
+.||......+....++..... .+ .+-..............+......+.+++.+|++.+|++|||+.|
T Consensus 239 ~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9999765422211111110000 00 000000000011011111122345889999999999999999999
Q ss_pred HHHH--HHHH
Q 003039 796 VLKD--IQDA 803 (854)
Q Consensus 796 V~~~--L~~~ 803 (854)
+++| ++++
T Consensus 319 ~l~hp~f~~~ 328 (383)
T 3eb0_A 319 AMAHPFFDHL 328 (383)
T ss_dssp HHTSGGGHHH
T ss_pred HhcCHHHHHH
Confidence 9976 4443
No 178
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4e-38 Score=353.18 Aligned_cols=240 Identities=14% Similarity=0.132 Sum_probs=186.0
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccC---CcccHHHHHHHH---HHHccCCCCceeeEe-------eeeeec
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEV---TLLSRIHHRNLVQFL-------GYCQEE 594 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~---~~~~~~~~~~Ev---~~L~~l~HpnIv~l~-------g~~~~~ 594 (854)
.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+ +++++++||||++++ +++...
T Consensus 76 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~ 155 (377)
T 3byv_A 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 155 (377)
T ss_dssp EEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred EEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence 34688999999999999964 6899999999743 233457788999 555566899999998 555544
Q ss_pred C-----------------eEEEEEEeccCCCHHhhhcccc---cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCC
Q 003039 595 G-----------------RSVLVYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRD 654 (854)
Q Consensus 595 ~-----------------~~~LV~E~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 654 (854)
+ ..++||||+ +|+|.+++.... .....+++..++.|+.||+.||+|||+. +|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 231 (377)
T 3byv_A 156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY 231 (377)
T ss_dssp TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 3 278999999 689999996421 1124466788889999999999999998 999999
Q ss_pred CCCCCEEEcCCCcEEEEeeeccccccCCCCceeecccccccccCccccccC-----------cCCCcchhhhHHHHHHHH
Q 003039 655 LKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-----------QLTDKSDVYSFGVILLEL 723 (854)
Q Consensus 655 Ikp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~s~~~DVwSlGvvl~el 723 (854)
|||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++|||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDG----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETT----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecC----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 99999999999999999999998532 23344567 999999999887 899999999999999999
Q ss_pred HhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 724 ISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 724 ltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
++|+.||...........+ .. . ....+ ..+.+++.+|++.||++||++.|++++
T Consensus 307 ltg~~Pf~~~~~~~~~~~~----------------~~-~-~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 307 WCADLPITKDAALGGSEWI----------------FR-S-CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHSSCCC------CCSGGG----------------GS-S-CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHCCCCCcccccccchhhh----------------hh-h-ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999764422111111 00 0 01222 357899999999999999999999975
No 179
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.8e-37 Score=338.68 Aligned_cols=246 Identities=21% Similarity=0.347 Sum_probs=201.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||++... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 122 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 122 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEec
Confidence 445789999999999999987 47899999987542 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 123 CRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999998743 35688999999999999999999998 99999999999999999999999999997654322
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .. . .+..+.. .+
T Consensus 196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~---~-~~~~~~~------~~ 260 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TY---L-RIKKNEY------SI 260 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HH---H-HHHHTCC------CC
T ss_pred -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HH---H-HHhcCCC------CC
Confidence 22334569999999999999999999999999999999999999997644211 11 1 1111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+ ..+.+++.+|++.||++||++.|++++
T Consensus 261 ~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PKHIN----PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11222 357789999999999999999999875
No 180
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=332.93 Aligned_cols=248 Identities=24% Similarity=0.394 Sum_probs=195.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccCCCHH
Q 003039 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~gsL~ 610 (854)
..||+|+||.||+|... +++.||||++..........+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999875 68899999998766556678999999999999999999999999999999999999999999
Q ss_pred hhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-CCcEEEEeeeccccccCCCCceeec
Q 003039 611 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 611 ~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkl~DFGla~~~~~~~~~~~~~ 689 (854)
+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...... .....
T Consensus 108 ~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 182 (295)
T 2clq_A 108 ALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET 182 (295)
T ss_dssp HHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccccc
Confidence 9986432 233466888889999999999999998 9999999999999997 8999999999997654322 12234
Q ss_pred ccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcC
Q 003039 690 VRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~--~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
..||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....... . ........ . ..+.+....
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~-~~~~~~~~-~-----~~~~~~~~~ 251 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----A-AMFKVGMF-K-----VHPEIPESM 251 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----H-HHHHHHHH-C-----CCCCCCTTS
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----H-HHHhhccc-c-----ccccccccC
Confidence 56899999999997643 7889999999999999999999996543111 0 11111000 0 111122222
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..+.+++.+|++.+|++||++.|++++
T Consensus 252 ~----~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 252 S----AEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp C----HHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred C----HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2 357889999999999999999999875
No 181
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-37 Score=342.16 Aligned_cols=261 Identities=26% Similarity=0.406 Sum_probs=203.2
Q ss_pred HHHHhhccccccCceEEEEEEEC------CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~------~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..+.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++...+..+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 34556789999999999999842 47789999997543 344567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHhhhccccc---ccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEe
Q 003039 599 LVYEFMHNGTLKEHLYGTLT---HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSD 672 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkl~D 672 (854)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. +..+||+|
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECc
Confidence 99999999999999965421 224588999999999999999999998 9999999999999994 44699999
Q ss_pred eeccccccCCCC-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhh
Q 003039 673 FGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +
T Consensus 187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~----~ 258 (327)
T 2yfx_A 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEF----V 258 (327)
T ss_dssp CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHH----H
T ss_pred cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHH----H
Confidence 999975433222 22234457899999999999999999999999999999998 99999754311 12221 1
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+.... .... ....+.+++.+|++.+|++||++.||+++|+.+...
T Consensus 259 ~~~~~~~-----~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 259 TSGGRMD-----PPKN----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HTTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hcCCCCC-----CCCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1111110 1111 224588999999999999999999999999987653
No 182
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-37 Score=342.56 Aligned_cols=264 Identities=21% Similarity=0.225 Sum_probs=196.2
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc-----cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~-----~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
.|.+.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 90 (346)
T 1ua2_A 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV 90 (346)
T ss_dssp --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEE
Confidence 4566789999999999999986 5899999998643221 134678999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 91 FDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999986 88888753 234678889999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc--
Q 003039 681 DGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG-- 757 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 757 (854)
... .......||+.|+|||.+.+. .++.++|||||||++|||++|..||......+....+....... ......+
T Consensus 164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 241 (346)
T 1ua2_A 164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP-TEEQWPDMC 241 (346)
T ss_dssp SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC-CTTTSSSTT
T ss_pred CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCC-Chhhhhhhc
Confidence 322 223345689999999999764 58889999999999999999999987654211111111100000 0000000
Q ss_pred ----ccCccccCcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 758 ----IIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ----~id~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+........+ ......+.+++.+|++.+|++|||+.|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000011 1122468899999999999999999999986
No 183
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.1e-37 Score=349.09 Aligned_cols=251 Identities=24% Similarity=0.380 Sum_probs=189.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--------ccHHHHHHHHHHHccCCCCceeeEeeeeeecCe
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--------~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~ 596 (854)
..|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+++|++++||||+++++++.. +.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence 34566789999999999999876 578999999865321 112347899999999999999999999854 55
Q ss_pred EEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEEEEee
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDF 673 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkl~DF 673 (854)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 214 ~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp EEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred eEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 799999999999998884 345689999999999999999999998 999999999999997544 5999999
Q ss_pred eccccccCCCCceeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 674 GLSKFAVDGASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 674 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
|+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+... +
T Consensus 287 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~----i 357 (419)
T 3i6u_A 287 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQ----I 357 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHH----H
T ss_pred ccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHH----H
Confidence 999865432 23344679999999999863 567889999999999999999999997543211 22221 1
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.... .+..... ....+.+++.+|++.+|++||++.|+++|
T Consensus 358 ~~~~~~~--~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCCC--Cchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111110 0111111 12458899999999999999999999986
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.5e-37 Score=329.64 Aligned_cols=244 Identities=24% Similarity=0.364 Sum_probs=200.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 95 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEe
Confidence 445789999999999999886 57889999986432 22346788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 96 APRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 999999999853 34688999999999999999999998 9999999999999999999999999998654332
Q ss_pred CceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ . .. .+.... ..+
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~---~~-~~~~~~------~~~ 231 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE----T---HR-RIVNVD------LKF 231 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----H---HH-HHHTTC------CCC
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH----H---HH-HHhccc------cCC
Confidence 2234568999999999999999999999999999999999999997544111 1 11 111111 111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+ ..+.+++.+|++.+|++||++.|+++|
T Consensus 232 ~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPFLS----DGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCcCC----HHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 11222 357899999999999999999999886
No 185
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=344.35 Aligned_cols=259 Identities=21% Similarity=0.307 Sum_probs=191.3
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc-cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~-~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 83 (324)
T 3mtl_A 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD- 83 (324)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence 45678999999999999987 6899999998654322 12245579999999999999999999999999999999997
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 84 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 84 KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 5888888532 34588899999999999999999998 99999999999999999999999999997543322 22
Q ss_pred eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC---CcccccCc-
Q 003039 687 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---DIQGIIDP- 761 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~---~~~~~id~- 761 (854)
.....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+ ....+....... ........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE----QLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHhchhhhcch
Confidence 234468999999999876 568999999999999999999999997654221 112111111110 00000000
Q ss_pred --------cccC----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 --------SLLD----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 --------~l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... .........+.+++.+|++.||++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 0001112457899999999999999999999986
No 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.8e-37 Score=335.15 Aligned_cols=247 Identities=25% Similarity=0.414 Sum_probs=203.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 345688999999999999875 68899999997553 3345788999999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 104 ~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 104 GGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp TEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 9999999842 4688999999999999999999998 99999999999999999999999999997654432 1
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccC
Q 003039 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .... .+..+.. +.+..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~~~~~~~-----~~~~~ 241 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLF----LIPKNNP-----PTLEG 241 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH----HHHHSCC-----CCCCS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----HHHH----HhhcCCC-----CCCcc
Confidence 223456899999999999999999999999999999999999999754311 1111 1111111 11222
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003039 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.++ ..+.+++..|++.+|++|||+.||+++.
T Consensus 242 ~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NYS----KPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccC----HHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 223 3578999999999999999999999863
No 187
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.3e-37 Score=355.40 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=197.6
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
..|.+.+.||+|+||+||+|+.+ ++..||||++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45667889999999999999986 68899999997543 3345678999999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC---CcEEEEeeeccccc
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~vkl~DFGla~~~ 679 (854)
|+++|+|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.. +.+||+|||+++..
T Consensus 117 ~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 117 CYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999988843 35688999999999999999999998 99999999999999764 55999999999865
Q ss_pred cCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++. ..++.++||||+||++|||++|+.||...... .+.. .+..+... .
T Consensus 190 ~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~----~i~~~~~~--~ 256 (494)
T 3lij_A 190 ENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ----EILR----KVEKGKYT--F 256 (494)
T ss_dssp BTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCC--C
T ss_pred CCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----HHHhCCCC--C
Confidence 4432 233456999999999876 56999999999999999999999999765421 1222 11222111 1
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.......+ ..+.+++.+|++.+|++|||+.|+++|
T Consensus 257 ~~~~~~~~s----~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEWKNVS----EGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGGTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CchhcccCC----HHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111111222 357899999999999999999999987
No 188
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.4e-37 Score=334.94 Aligned_cols=261 Identities=24% Similarity=0.390 Sum_probs=183.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 96 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 96 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCT
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhcc
Confidence 445789999999999999865 68999999986443 2335678899999999999999999999999999999999999
Q ss_pred CCCHHhhhcccc----cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 606 NGTLKEHLYGTL----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 606 ~gsL~~~L~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
+++|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 999999986421 1234588999999999999999999998 999999999999999999999999999875543
Q ss_pred CCC----ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 682 GAS----HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 682 ~~~----~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ................
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQNDPPSLET 249 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHHHHHHTSSCCCTTC
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----hHHHHHhccCCCcccc
Confidence 211 12234468999999999876 56899999999999999999999999764421 1111111000000001
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...++.+...++ ..+.+++.+|++.+|++||++.|++++
T Consensus 250 ~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111222222333 357899999999999999999999985
No 189
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.4e-37 Score=344.34 Aligned_cols=254 Identities=23% Similarity=0.332 Sum_probs=198.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 114 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred ceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCC
Confidence 345678999999999999987 68999999997653 3345678999999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 115 GGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp TCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 9999999853 346889999999999999999999831 7999999999999999999999999998654321
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccc------------------------
Q 003039 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN------------------------ 741 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~------------------------ 741 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 22334689999999999999999999999999999999999999975432111000
Q ss_pred -----------hHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 742 -----------IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 742 -----------l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... .+.. +.+ ........+.+++.+|++.+|++|||+.|+++|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIV-NEPP-----PKL---PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------CCCHHHHHHHHH-HSCC-----CCC---CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCcccchhhhhHHh-ccCC-----CCC---CcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000 0000 000 001112358899999999999999999999987
No 190
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7e-37 Score=354.84 Aligned_cols=250 Identities=27% Similarity=0.378 Sum_probs=200.3
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccC--CcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~--~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
..|.+.+.||+|+||+||+|+.. +++.||||++... .......+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45677899999999999999986 6899999998643 22345778999999999999999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc---CCCcEEEEeeeccccc
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~---~~~~vkl~DFGla~~~ 679 (854)
|+.+|+|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 102 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 102 LYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999998843 35688999999999999999999998 999999999999995 4567999999999865
Q ss_pred cCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... .+.. .+..+....
T Consensus 175 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~----~i~~~~~~~-- 241 (486)
T 3mwu_A 175 QQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILK----RVETGKYAF-- 241 (486)
T ss_dssp CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCCS--
T ss_pred CCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----HHHhCCCCC--
Confidence 4332 2334569999999999875 5899999999999999999999999765421 1111 112222110
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 242 ~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 DLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSGGGGGS----CHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCcccCCC----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00001112 2357899999999999999999999986
No 191
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.7e-37 Score=334.36 Aligned_cols=255 Identities=26% Similarity=0.376 Sum_probs=193.9
Q ss_pred HHhhccccccCceEEEEEEEC--CCc--EEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK--DGK--EIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~--~~~--~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
+.+.+.||+|+||.||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.... .++|
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v 98 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMV 98 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEE
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceee
Confidence 456789999999999999864 233 68999987542 234567889999999999999999999998765 8899
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
+||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 99 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 99 TELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999998632 35688999999999999999999998 99999999999999999999999999998664
Q ss_pred CCCCce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 681 DGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... .....+|..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.. .....+...
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~---~~~~~~~~~- 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILH---KIDKEGERL- 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHH---HHHTSCCCC-
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH----HHHH---HHHccCCCC-
Confidence 433221 233457889999999998889999999999999999999 99999765411 1111 111111100
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..... ....+.+++.+|++.+|++||++.+|+++|+++..
T Consensus 245 ----~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 245 ----PRPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ----CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ----CCCcC----cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 01111 23468899999999999999999999999998754
No 192
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.2e-37 Score=328.81 Aligned_cols=245 Identities=24% Similarity=0.428 Sum_probs=192.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence 445789999999999999987 68999999986432 22345788999999999999999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 93 VSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred cCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999853 34588899999999999999999998 99999999999999999999999999997654322
Q ss_pred CceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... .+.. .+..+...
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~------ 229 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----TLFK----KIRGGVFY------ 229 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCC------
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHH----HhhcCccc------
Confidence 2233468999999999987765 68999999999999999999999754321 1111 11112110
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++||++.||+++
T Consensus 230 ~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 IPEYL----NRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cchhc----CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11111 2357899999999999999999999986
No 193
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.7e-37 Score=356.11 Aligned_cols=251 Identities=28% Similarity=0.403 Sum_probs=203.6
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 345677889999999999999987 78999999996542 33467789999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSK 677 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~ 677 (854)
|||+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998853 45689999999999999999999998 99999999999999 567899999999998
Q ss_pred cccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... .+.. .+..+....
T Consensus 178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~----~i~~~~~~~ 246 (484)
T 3nyv_A 178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY----DILK----KVEKGKYTF 246 (484)
T ss_dssp HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCCC
T ss_pred Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHcCCCCC
Confidence 654432 2234569999999999865 6899999999999999999999999765421 1222 122222110
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 247 --~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 --ELPQWKKV----SESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CSGGGGGS----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCcccccC----CHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00001112 2457899999999999999999999876
No 194
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.8e-37 Score=351.39 Aligned_cols=259 Identities=24% Similarity=0.278 Sum_probs=193.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeec------CeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~------~~~~LV 600 (854)
|.+.+.||+|+||.||+|++. +++.||||++.... ....+|+++|++++||||+++++++... ...++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 345688999999999999986 58999999986542 2234799999999999999999998542 236799
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC-CcEEEEeeeccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFA 679 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkl~DFGla~~~ 679 (854)
|||+++ +|.+.+.........+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 66666654334456789999999999999999999998 99999999999999965 67899999999865
Q ss_pred cCCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-------hh
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------IE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-------~~ 751 (854)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...++.. +.
T Consensus 208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHHHH
T ss_pred ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHH
Confidence 44322 2334689999999999764 78999999999999999999999997654211 222221110 00
Q ss_pred --cCCcccccCccccC-----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 752 --SGDIQGIIDPSLLD-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 --~~~~~~~id~~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+..-+.+.. .+.......+.+|+.+|++.||++||++.|+++|
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 01111111111110 0111123468899999999999999999999976
No 195
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=329.26 Aligned_cols=250 Identities=22% Similarity=0.360 Sum_probs=198.0
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
..+.+.+.||+|+||.||+|... +|+.||||++.... ....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 34456789999999999999887 58999999997543 3467889999999999999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 107 GAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp TTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999852 245688999999999999999999998 999999999999999999999999999976543322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcccc
Q 003039 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..... ...........+
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~~~~~~~~~~~~--- 248 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFM-IPTNPPPTFRKP--- 248 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHH-HHHSCCCCCSSG---
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHH-HhcCCCcccCCc---
Confidence 223446899999999999999999999999999999999999999754311 11111 111111111001
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+ ...+.+++.+|++.+|++||++.|++++
T Consensus 249 ~~~----~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 249 ELW----SDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GGS----CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111 2358899999999999999999999875
No 196
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.6e-37 Score=331.70 Aligned_cols=250 Identities=21% Similarity=0.352 Sum_probs=195.2
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
+.+.+.||+|+||.||+|+.. +++.||+|++..........+.+|++++++++||||+++++++...+..++||||+++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence 445788999999999999987 5889999999776666678899999999999999999999999999999999999999
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
++|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...... ...
T Consensus 101 ~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 173 (302)
T 2j7t_A 101 GAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK 173 (302)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred CcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence 999998853 235588999999999999999999998 9999999999999999999999999987532211 111
Q ss_pred eecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 687 SSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~-----~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.....||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ........ +.......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~~~~~~- 244 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAK-SDPPTLLT- 244 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHH-SCCCCCSS-
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHHHhc-cCCcccCC-
Confidence 22345899999999984 567889999999999999999999999754411 11111111 11111111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ...+.+++.+|++.+|++|||+.|+++|
T Consensus 245 --~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 245 --PSKW----SVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --GGGS----CHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --cccc----CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1111 2357899999999999999999999874
No 197
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-37 Score=340.84 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=190.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecC------eEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~------~~~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 445688999999999999885 68999999986432 223467889999999999999999999997653 459
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 999999 7899998853 4588889999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-----------
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA----------- 746 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~----------- 746 (854)
.... .....||+.|+|||++.+ ..++.++||||+||+++||++|+.||.+....+....+....
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 253 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 5332 234468999999999987 789999999999999999999999997654211111111100
Q ss_pred -----HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 747 -----KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 -----~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.. +...-...+. .........+.+|+.+|++.||++|||+.|+++|
T Consensus 254 ~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 254 QSDEAKNYMKG--LPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp SCHHHHHHHHH--SCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhHHHHHHHHh--CCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000 0000000000 0011123457899999999999999999999986
No 198
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.2e-36 Score=345.33 Aligned_cols=196 Identities=24% Similarity=0.355 Sum_probs=163.3
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeec-----CeEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~-----~~~~L 599 (854)
|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++... ...++
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 456789999999999999876 57889999997542 23456788999999999999999999999766 57899
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+. |+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 108 v~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 999986 599998843 45689999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCC---------------------ceeecccccccccCcccc-ccCcCCCcchhhhHHHHHHHHHhCCcccc
Q 003039 680 VDGAS---------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISGQEAIS 731 (854)
Q Consensus 680 ~~~~~---------------------~~~~~~~gt~~Y~aPE~~-~~~~~s~~~DVwSlGvvl~elltG~~pf~ 731 (854)
..... .......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 43221 122456799999999986 45679999999999999999998666553
No 199
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.4e-36 Score=337.26 Aligned_cols=250 Identities=24% Similarity=0.367 Sum_probs=199.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc--------cHHHHHHHHHHHccC-CCCceeeEeeeeeecCe
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~--------~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~ 596 (854)
.|.+.+.||+|+||.||+|++. +|+.||||+++..... ..+.+.+|+.+++++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 3444689999999999999986 6999999998754311 134678899999999 79999999999999999
Q ss_pred EEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecc
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla 676 (854)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 175 ~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 9999999999999999853 35688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCceeecccccccccCcccccc------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 677 KFAVDGASHVSSIVRGTVGYLDPEYYIS------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..... +
T Consensus 248 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~----i 317 (365)
T 2y7j_A 248 CHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI----LMLRM----I 317 (365)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----H
T ss_pred cccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----HHHHH----H
Confidence 7654432 2234569999999999863 35888999999999999999999999754311 11111 1
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.... ..+ ..... ...+.+++.+|++.+|++||++.|++++
T Consensus 318 ~~~~~~~-~~~-~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQF-SSP-EWDDR----SSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCCC-CHH-HHSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCCC-CCc-ccccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111100 000 00111 2358899999999999999999999875
No 200
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.4e-37 Score=346.83 Aligned_cols=262 Identities=22% Similarity=0.265 Sum_probs=193.0
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCe------EEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~------~~LV~ 601 (854)
|.+.+.||+|+||+||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+. .++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 456789999999999999998777899998864422 22369999999999999999999965443 78999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcEEEEeeecccccc
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~vkl~DFGla~~~~ 680 (854)
||++++.+ +.+.........+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++...
T Consensus 118 e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 118 EYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp ECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99987544 33332223356788999999999999999999998 999999999999999 79999999999998654
Q ss_pred CCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH--------H---H
Q 003039 681 DGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA--------K---L 748 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~--------~---~ 748 (854)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+.... . .
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 4332 2334689999999998764 58999999999999999999999997654221111111110 0 0
Q ss_pred hhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+..+....+...+.......+.+|+.+|++.||++|||+.|+++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000001111000000001111123468899999999999999999999986
No 201
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-37 Score=354.37 Aligned_cols=192 Identities=24% Similarity=0.371 Sum_probs=150.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeec-----CeEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~-----~~~~ 598 (854)
.|.+.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++... ...+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 3556789999999999999876 68999999986532 23456788999999999999999999999443 5789
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+ +|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+|+.
T Consensus 134 lv~e~~-~~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEECCC-SEEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEecc-ccchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 999998 468988884 345689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC--------------------------ceeecccccccccCcccc-ccCcCCCcchhhhHHHHHHHHHhC
Q 003039 679 AVDGAS--------------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 679 ~~~~~~--------------------------~~~~~~~gt~~Y~aPE~~-~~~~~s~~~DVwSlGvvl~elltG 726 (854)
...... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 542211 122345689999999986 456799999999999999999993
No 202
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.1e-37 Score=339.36 Aligned_cols=265 Identities=19% Similarity=0.270 Sum_probs=197.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeee--------cC
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQE--------EG 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~--------~~ 595 (854)
.|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 3456789999999999999985 689999999865432 234578899999999999999999999976 45
Q ss_pred eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeec
Q 003039 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGl 675 (854)
..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 68999999985 777776432 34588999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCC---CceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003039 676 SKFAVDGA---SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 676 a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+..... ...
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~ 249 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG-SIT 249 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCC
Confidence 97654221 122234568999999999876 5589999999999999999999999976542211111111100 000
Q ss_pred cCCcccccCccc--------cCcCCH-HH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 752 SGDIQGIIDPSL--------LDEYDI-QS------MWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~id~~l--------~~~~~~-~~------~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......-+... ...... +. ...+.+|+.+|++.||++|||+.|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000000 000011 11 2347899999999999999999999986
No 203
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.2e-37 Score=343.34 Aligned_cols=251 Identities=10% Similarity=0.012 Sum_probs=176.8
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---ccHHHHHHHHHHHccC--CCCceeeEe-------eeeeec-
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI--HHRNLVQFL-------GYCQEE- 594 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---~~~~~~~~Ev~~L~~l--~HpnIv~l~-------g~~~~~- 594 (854)
.+.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.+++.+ +||||++++ +++...
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 35688999999999999976 689999999986543 2345567785444444 699988855 344332
Q ss_pred ----------------CeEEEEEEeccCCCHHhhhcccccccccccHHHH------HHHHHHHHHHHHHHHhCCCCceec
Q 003039 595 ----------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKR------LEIAEDAAKGIEYLHTGCVPAIIH 652 (854)
Q Consensus 595 ----------------~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH 652 (854)
...++||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||++ +|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 33799999999 8999999643 223344455 67889999999999998 9999
Q ss_pred CCCCCCCEEEcCCCcEEEEeeeccccccCCCCceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCccc
Q 003039 653 RDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 653 rDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~~DVwSlGvvl~elltG~~pf 730 (854)
|||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999985532 2224457799999999987 78999999999999999999999999
Q ss_pred ccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 731 SNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 731 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... . .............+...........+.+++.+|++.+|++|||+.|+++|
T Consensus 294 ~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 294 GLVTPGIKG-S--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TBCCTTCTT-C--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCcCccccc-c--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 765421100 0 00000000001111111011223468899999999999999999999875
No 204
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.8e-36 Score=349.35 Aligned_cols=260 Identities=20% Similarity=0.333 Sum_probs=204.6
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCC-CceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~H-pnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
|.+.++||+|+||.||+|++. +++.||||++..... ..++..|+++++.++| +++..+..++...+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 345789999999999999874 689999999865432 2457889999999976 56666777777888899999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---cCCCcEEEEeeeccccccCC
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~vkl~DFGla~~~~~~ 682 (854)
+++|.+++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999998532 45689999999999999999999998 99999999999999 68899999999999866543
Q ss_pred CCc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 683 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 683 ~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......... ..+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSIE 238 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccHH
Confidence 322 122457999999999999999999999999999999999999999865532222222221111111 1110
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. +...+ ..++.+++..|++.+|++||++.+|++.|++++..
T Consensus 239 ~-----l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 A-----LCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp H-----HHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H-----HhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0 11122 24688999999999999999999999999998653
No 205
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.3e-37 Score=333.14 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=186.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-cc-HHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEec
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QG-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-~~-~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~ 604 (854)
+.+.+.||+|+||.||+|+.. +++.||||+++.... .. .+.+.++...++.++||||+++++++...+..++||||+
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehh
Confidence 345689999999999999975 689999999975432 22 233445556688899999999999999999999999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
+ |+|.+++.........+++..++.++.|++.||+|||++ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 164 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV- 164 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccccc-
Confidence 7 588888865555567799999999999999999999985 289999999999999999999999999997654332
Q ss_pred ceeecccccccccCcccc----ccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003039 685 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~----~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
......||+.|+|||.+ .+..++.++|||||||++|||++|+.||..... -............. ...
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~~~- 235 (290)
T 3fme_A 165 -AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSP-QLP- 235 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCC-CCC-
T ss_pred -cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhccCCC-Ccc-
Confidence 22334689999999996 556788999999999999999999999975321 11111112221111 100
Q ss_pred ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ...+.+++.+|++.+|++|||+.|+++|
T Consensus 236 ---~~~~----~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 236 ---ADKF----SAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ---TTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---cccC----CHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1112 2357899999999999999999999885
No 206
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-36 Score=333.52 Aligned_cols=256 Identities=19% Similarity=0.292 Sum_probs=195.8
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CCceeeEeeeeee--cCeEEEEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQE--EGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~~--~~~~~LV~E 602 (854)
.|.+.+.||+|+||.||+|+.. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ....++|||
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred ceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 3456789999999999999875 6899999998743 3567899999999997 9999999999987 667899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC-cEEEEeeeccccccC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVD 681 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkl~DFGla~~~~~ 681 (854)
|+.+++|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999998873 377888999999999999999998 999999999999999776 899999999986544
Q ss_pred CCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH--------Hhhhc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK--------LHIES 752 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~--------~~~~~ 752 (854)
... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+..... ..+..
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHHHH
Confidence 322 234468999999999987 67899999999999999999999999543211 011111100 00000
Q ss_pred CCc--------------ccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 753 GDI--------------QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 753 ~~~--------------~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...................+.+++.+|++.||++|||++|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 00000000111111123468899999999999999999999986
No 207
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-36 Score=333.97 Aligned_cols=252 Identities=24% Similarity=0.389 Sum_probs=195.7
Q ss_pred HHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--------ccHHHHHHHHHHHccCCCCceeeEeeeeeecC
Q 003039 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--------~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~ 595 (854)
...|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 345667899999999999999876 578999999865321 12235789999999999999999999987655
Q ss_pred eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEe
Q 003039 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSD 672 (854)
Q Consensus 596 ~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---vkl~D 672 (854)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999884 345688999999999999999999998 9999999999999987664 99999
Q ss_pred eeccccccCCCCceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003039 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .+....
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~--- 232 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQI--- 232 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHH---
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHH---
Confidence 9999765432 2223456899999999974 4678899999999999999999999997544221 222211
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+... ..+...... ...+.+++.+|++.+|++||++.|++++
T Consensus 233 -~~~~~~--~~~~~~~~~----~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 -TSGKYN--FIPEVWAEV----SEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp -HHTCCC--CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -HhCccc--cCchhhhhc----CHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 111111 001111111 2467899999999999999999999975
No 208
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.1e-37 Score=367.31 Aligned_cols=246 Identities=24% Similarity=0.292 Sum_probs=200.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC---cccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||+|+++++++.+.+..++|||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E 422 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence 345678999999999999986 57889999997531 23345677899999987 79999999999999999999999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++.....
T Consensus 423 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 423 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred CcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999953 35689999999999999999999998 9999999999999999999999999999853322
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+ .. ..+.+ .
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~----~~~~---~i-~~~~~------~ 560 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQ---SI-MEHNV------A 560 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH---HH-HSSCC------C
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH----HHHH---HH-HhCCC------C
Confidence 2 2344567999999999999999999999999999999999999999765421 1111 11 11111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
+... ...++.+|+..|++.+|++||++ +||.+|
T Consensus 561 ~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 561 YPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp CCTT----SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred CCcc----CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1111 22457899999999999999997 777765
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-36 Score=329.62 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=196.0
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++...+..++||||+.
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence 34678999999999999986 689999999865432 234678899999999999999999999999999999999998
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 86 -~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~ 158 (299)
T 2r3i_A 86 -QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R 158 (299)
T ss_dssp -EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-B
T ss_pred -CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-c
Confidence 6999988543 224578889999999999999999998 99999999999999999999999999997654322 1
Q ss_pred eeecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc------
Q 003039 686 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI------ 758 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~-~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~------ 758 (854)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+ .+....... +...+.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~ 232 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFRIFRTL---GTPDEVVWPGVT 232 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHH---CCCCTTTSTTGG
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHh---CCCchhhhhHhh
Confidence 223345899999999998765 7899999999999999999999997654211 111111111 100000
Q ss_pred ----cCcccc----CcC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 759 ----IDPSLL----DEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 ----id~~l~----~~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.+. ..+ .......+.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 000 00122467899999999999999999999874
No 210
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-36 Score=338.23 Aligned_cols=260 Identities=22% Similarity=0.293 Sum_probs=189.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecC------eEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~------~~~ 598 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 445688999999999999876 68899999997542 233466889999999999999999999997654 789
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 107 IVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999975 7877773 2478888999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchH---------------
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV--------------- 743 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~--------------- 743 (854)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 5332 12234568999999999999999999999999999999999999997644211100000
Q ss_pred HHHHHhhhcCC------cccccCccccC---cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 744 QWAKLHIESGD------IQGIIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 744 ~~~~~~~~~~~------~~~~id~~l~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........... +...+...... .........+.+++.+|++.||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000010000 00000000000 0112234678999999999999999999999986
No 211
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-36 Score=328.09 Aligned_cols=249 Identities=27% Similarity=0.321 Sum_probs=198.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---------ccHHHHHHHHHHHccCC-CCceeeEeeeeeecCe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---------QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGR 596 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---------~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~~~~~ 596 (854)
|.+.+.||+|+||.||+|..+ +++.||||++..... ...+.+.+|+++++++. ||||+++++++...+.
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence 345688999999999999986 588999999975431 12356788999999995 9999999999999999
Q ss_pred EEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecc
Q 003039 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla 676 (854)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 99 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 99 FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999853 35688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCceeecccccccccCccccc------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 677 KFAVDGASHVSSIVRGTVGYLDPEYYI------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
+...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .... .+
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~ 241 (298)
T 1phk_A 172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM----LMLR----MI 241 (298)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HH
T ss_pred hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH----HHHH----HH
Confidence 7654332 223356899999999985 456888999999999999999999999754311 1111 11
Q ss_pred hcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.... ..+ .... ....+.+++.+|++.+|++||++.|++++
T Consensus 242 ~~~~~~~-~~~-~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 242 MSGNYQF-GSP-EWDD----YSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHTCCCC-CTT-TGGG----SCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hcCCccc-Ccc-cccc----cCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111110 000 0111 22458899999999999999999999874
No 212
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.1e-37 Score=344.37 Aligned_cols=272 Identities=21% Similarity=0.276 Sum_probs=203.3
Q ss_pred cCHHHHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC--------CCceeeEe
Q 003039 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH--------HRNLVQFL 588 (854)
Q Consensus 518 ~~~~~~~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~--------HpnIv~l~ 588 (854)
+..+++....|.+.++||+|+||+||+|+.. +++.||||+++.. ......+.+|++++++++ |+||++++
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence 3444444455677889999999999999875 5889999999743 234567889999999985 78899999
Q ss_pred eeee----ecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC
Q 003039 589 GYCQ----EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 589 g~~~----~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
+++. .....++||||+ +++|.+.+... ....+++..++.++.||+.||+|||+++ +|+||||||+|||++.
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~ 182 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSV 182 (397)
T ss_dssp EEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECC
T ss_pred cceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEec
Confidence 9987 556889999999 56666666432 2356889999999999999999999953 8999999999999997
Q ss_pred CC-------------------------------------------------cEEEEeeeccccccCCCCceeeccccccc
Q 003039 665 HM-------------------------------------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 695 (854)
Q Consensus 665 ~~-------------------------------------------------~vkl~DFGla~~~~~~~~~~~~~~~gt~~ 695 (854)
++ .+||+|||+++..... .....||+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~ 258 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQ 258 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGG
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCc
Confidence 75 7999999999765432 233468999
Q ss_pred ccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch--HHHHHHhhh--------cCC-----------
Q 003039 696 YLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--VQWAKLHIE--------SGD----------- 754 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l--~~~~~~~~~--------~~~----------- 754 (854)
|+|||++.+..++.++|||||||++|||++|+.||............ ......... .+.
T Consensus 259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1wak_A 259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD 338 (397)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence 99999999999999999999999999999999999765422211111 111111000 000
Q ss_pred cccccCccc---------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l---------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+... ....+......+.+|+.+|++.||++|||+.|+++|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 339 LKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp BSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000000 012345666789999999999999999999999875
No 213
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.5e-36 Score=353.77 Aligned_cols=249 Identities=28% Similarity=0.419 Sum_probs=197.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-------------ccHHHHHHHHHHHccCCCCceeeEeeeee
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-------------~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~ 592 (854)
.|.+.++||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.
T Consensus 37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 116 (504)
T 3q5i_A 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE 116 (504)
T ss_dssp TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3556789999999999999986 578999999875431 23467889999999999999999999999
Q ss_pred ecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC---cEE
Q 003039 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAK 669 (854)
Q Consensus 593 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vk 669 (854)
..+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+|
T Consensus 117 ~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 117 DKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred cCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999998843 45689999999999999999999998 999999999999999776 699
Q ss_pred EEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003039 670 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 670 l~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|..||...... .+.. .
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~----~ 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ----DIIK----K 258 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----H
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----H
Confidence 99999998654432 233456999999999986 56899999999999999999999999765421 1211 1
Q ss_pred hhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..+.... +....... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 259 i~~~~~~~--~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEKGKYYF--DFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHCCCCC--CHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHcCCCCC--CccccCCC----CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 22222110 00001111 2457899999999999999999999876
No 214
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.1e-37 Score=366.78 Aligned_cols=258 Identities=22% Similarity=0.345 Sum_probs=203.1
Q ss_pred HHHHhhccccccCceEEEEEEECC----CcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~~----~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
..+.+.+.||+|+||.||+|.+.. +..||||+++... ....+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 345567889999999999998752 4579999987543 233467899999999999999999999985 4568999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 469 ~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999532 34588999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
...........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+... +..+....
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~~~~~----i~~~~~~~-- 612 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR----IENGERLP-- 612 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHHTCCCC--
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----HHHHH----HHcCCCCC--
Confidence 443333344557889999999998999999999999999999997 99999765421 12221 11121111
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
+.. .....+.+++.+|++.+|++||++.||++.|++++..+
T Consensus 613 ---~~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ---MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ---CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 111 12246889999999999999999999999999987543
No 215
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.1e-37 Score=339.64 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=195.7
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHH-HccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~-L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
.+.+.||+|+||.||+|+.. +|+.||||+++... ......+..|+.+ ++.++||||+++++++...+..++||||++
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD 133 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh
Confidence 34578999999999999875 68999999997543 2334455556655 788899999999999999999999999997
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+ +|.+++.........+++..++.++.||+.||+|||++ .+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 134 ~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~ 208 (340)
T 3an0_A 134 T-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--V 208 (340)
T ss_dssp E-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--H
T ss_pred C-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccc--c
Confidence 5 99998865444566799999999999999999999974 28999999999999999999999999999765332 1
Q ss_pred eeecccccccccCccccc----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 686 VSSIVRGTVGYLDPEYYI----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~----~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ............. ...
T Consensus 209 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~~-~~~-- 279 (340)
T 3an0_A 209 AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPSP-QLP-- 279 (340)
T ss_dssp HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCCC-CCC--
T ss_pred ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCCC-CCC--
Confidence 223346999999999964 347889999999999999999999999753211 1111112221111 000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ...+.+++.+|++.+|++||++.||+++
T Consensus 280 --~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 280 --ADKF----SAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp --GGGS----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --cccC----CHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0112 2458899999999999999999999875
No 216
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.5e-37 Score=343.16 Aligned_cols=259 Identities=20% Similarity=0.250 Sum_probs=190.2
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCcc-----------cHHHHHHHHHHHccCCCCceeeEeeeeee---
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQFLGYCQE--- 593 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~-----------~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~--- 593 (854)
|.+.+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++||||+++++++..
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 103 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE 103 (362)
T ss_dssp CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence 3446889999999999999888999999998643221 12678999999999999999999999843
Q ss_pred --cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEE
Q 003039 594 --EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 594 --~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~ 671 (854)
....++||||+. |+|.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 104 ~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 104 PAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEE
Confidence 346899999998 688888753 344689999999999999999999998 99999999999999999999999
Q ss_pred eeeccccccCCCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 672 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 672 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
|||+++..... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+... .
T Consensus 177 Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~----~ 250 (362)
T 3pg1_A 177 DFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV----V 250 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH----H
T ss_pred ecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH----c
Confidence 99999744332 22234568999999999887 67899999999999999999999999765422221111111 0
Q ss_pred hcCCcc-----------cccCcccc-------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 751 ESGDIQ-----------GIIDPSLL-------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~-----------~~id~~l~-------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...... +.+...+. ..........+.+++.+|++.+|++|||+.|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000 00000000 00011123458899999999999999999999986
No 217
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.3e-36 Score=335.89 Aligned_cols=259 Identities=21% Similarity=0.289 Sum_probs=197.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-ccHHHHHHHHHHHccCCCCceeeEeeeeeec-----CeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~-----~~~~LV 600 (854)
|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++... ...++|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 456789999999999999876 688899999975432 3346788999999999999999999998654 468999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+. |+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 109 QDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99997 58988884 24588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCce--eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc-
Q 003039 681 DGASHV--SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ- 756 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~- 756 (854)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+... .......
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~~~~~~~ 255 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI----LGSPSQED 255 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH----HCSCCHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH----hCCCCHHH
Confidence 322211 234579999999998765 45899999999999999999999999765533222222111 0000000
Q ss_pred --------------cccCcccc--CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 --------------GIIDPSLL--DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 --------------~~id~~l~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+.-. ..........+.+++.+|++.||++|||+.|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00001112457899999999999999999999986
No 218
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.7e-36 Score=335.45 Aligned_cols=258 Identities=22% Similarity=0.286 Sum_probs=200.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCCccc-----------------HHHHHHHHHHHccCCCCceeeEeee
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG-----------------KREFTNEVTLLSRIHHRNLVQFLGY 590 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~-----------------~~~~~~Ev~~L~~l~HpnIv~l~g~ 590 (854)
|.+.+.||+|+||.||+|+. +++.||||++....... ...+.+|++++++++||||++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 111 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEE
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 44678999999999999999 79999999986432111 1789999999999999999999999
Q ss_pred eeecCeEEEEEEeccCCCHHhhhccc--cc--ccccccHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCCCCCEEEcCC
Q 003039 591 CQEEGRSVLVYEFMHNGTLKEHLYGT--LT--HEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 591 ~~~~~~~~LV~E~~~~gsL~~~L~~~--~~--~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~ 665 (854)
+...+..++||||+++|+|.+++... .. ....+++..++.++.|++.||+|||+ . +|+||||||+|||++.+
T Consensus 112 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKN 188 (348)
T ss_dssp EESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTT
T ss_pred EeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCC
Confidence 99999999999999999999983211 11 25678999999999999999999999 7 99999999999999999
Q ss_pred CcEEEEeeeccccccCCCCceeecccccccccCccccccC-cCCC-cchhhhHHHHHHHHHhCCcccccccccccccchH
Q 003039 666 MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTD-KSDVYSFGVILLELISGQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~-~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++..... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||...... ..+.
T Consensus 189 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~ 262 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VELF 262 (348)
T ss_dssp SCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HHHH
T ss_pred CcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHH
Confidence 99999999999765433 33445699999999999877 6666 999999999999999999999765421 1111
Q ss_pred HHHHHhhhcCCcccccCc-----ccc----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 744 QWAKLHIESGDIQGIIDP-----SLL----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~-----~l~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. +..+......+. .+. ..........+.+++.+|++.+|++||++.|+++|
T Consensus 263 ~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 122211100000 000 00001223468899999999999999999999985
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.2e-36 Score=344.90 Aligned_cols=196 Identities=26% Similarity=0.341 Sum_probs=168.5
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccC------CCCceeeEeeeeeecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI------HHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l------~HpnIv~l~g~~~~~~~~~LV 600 (854)
|.+.+.||+|+||.||+|... +++.||||+++.. ......+.+|+++++.+ +|+||+++++++...+..++|
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 556789999999999999876 5889999999753 23345677888888777 577999999999999999999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc--EEEEeeecccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 678 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--vkl~DFGla~~ 678 (854)
|||+. ++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 178 ~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 178 FELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp ECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 99996 6899988543 234588999999999999999999998 9999999999999999987 99999999975
Q ss_pred ccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~ 734 (854)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 4322 233468999999999999999999999999999999999999997654
No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=328.19 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=194.8
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC----cccHHHHHHHHHHHccCCCCceeeEeeee--eecCeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYC--QEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~----~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~--~~~~~~~LV 600 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++ ...+..++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 345789999999999999875 68899999986532 23456789999999999999999999998 445688999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||++++ |.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 9999876 76766432 245688999999999999999999998 99999999999999999999999999997654
Q ss_pred CCC-CceeecccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 681 DGA-SHVSSIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 681 ~~~-~~~~~~~~gt~~Y~aPE~~~~~~--~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .+.. .+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~i~~~~~-- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY----KLFE----NIGKGSY-- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHH----HHHHCCC--
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH----HHHH----HHhcCCC--
Confidence 322 22334456999999999987643 477999999999999999999999764411 1111 1122211
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.... ...+.+++.+|++.+|++||++.|++++
T Consensus 231 ----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----AIPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCCCcc----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111222 2357899999999999999999999986
No 221
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=340.64 Aligned_cols=263 Identities=19% Similarity=0.266 Sum_probs=180.6
Q ss_pred hccccccCceEEEEEEEC---CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeee--cCeEEEEEEecc
Q 003039 531 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~---~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~--~~~~~LV~E~~~ 605 (854)
+++||+|+||+||+|+++ +++.||||++.... ....+.+|+++|++++||||+++++++.. ....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 468999999999999976 47889999987543 23568899999999999999999999954 678999999997
Q ss_pred CCCHHhhhcccc-----cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE----cCCCcEEEEeeecc
Q 003039 606 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 676 (854)
Q Consensus 606 ~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~vkl~DFGla 676 (854)
+ +|.+++.... .....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 4 7877774221 1223488999999999999999999998 99999999999999 67899999999999
Q ss_pred ccccCCCC--ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCccccccccccc-----ccchHHHHHH
Q 003039 677 KFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-----CRNIVQWAKL 748 (854)
Q Consensus 677 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~-----~~~l~~~~~~ 748 (854)
+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .......+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 86543221 22344579999999999987 4589999999999999999999999965432100 0011111111
Q ss_pred hhhcCC---cccc------------cCccccCcCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 749 HIESGD---IQGI------------IDPSLLDEYDI---------QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~---~~~~------------id~~l~~~~~~---------~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.... ...+ +.......... .....+.+|+.+|++.||++|||++|+++|
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 0000 00000000000 002357899999999999999999999987
No 222
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.6e-36 Score=323.22 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=189.2
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeee------------
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 593 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~------------ 593 (854)
.+.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|++++++++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 3456789999999999999975 6899999998643 2335678899999999999999999998865
Q ss_pred -cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 003039 594 -EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 594 -~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~D 672 (854)
.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 4567999999999999999963 234577888899999999999999998 999999999999999999999999
Q ss_pred eeccccccCCC-------------CceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCccccccccccc
Q 003039 673 FGLSKFAVDGA-------------SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGAN 738 (854)
Q Consensus 673 FGla~~~~~~~-------------~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~ 738 (854)
||+++...... ........||+.|+|||.+.+. .++.++|||||||++|||++ ||.... .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---~ 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---E 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---H
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---h
Confidence 99997654221 1122345689999999999864 78999999999999999998 443211 0
Q ss_pred ccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.. .+.... ..+....+......+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILK----KLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHH----HHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHH----hccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 001111 111111 111112222333457899999999999999999999986
No 223
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=331.13 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=195.5
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
+.+.+.||+|+||.||+|+.++ .||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~ 112 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCK 112 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeeccc
Confidence 3457899999999999999863 59999986542 2234567889999999999999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC--
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-- 683 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~-- 683 (854)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 113 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 113 GRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp SEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999542 34688999999999999999999998 999999999999998 6799999999987543211
Q ss_pred --CceeecccccccccCcccccc---------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc
Q 003039 684 --SHVSSIVRGTVGYLDPEYYIS---------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES 752 (854)
Q Consensus 684 --~~~~~~~~gt~~Y~aPE~~~~---------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~ 752 (854)
........||+.|+|||.+.. ..++.++|||||||++|||++|+.||...... .+.. .+..
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~----~~~~ 257 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE----AIIW----QMGT 257 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----HHHH----HHHT
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----Hhcc
Confidence 112233458999999999874 35788999999999999999999999754411 1111 1122
Q ss_pred CCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 753 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 753 ~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+........ .. ...+.+++.+|++.+|++|||+.||++.|+++...
T Consensus 258 ~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 211111111 11 12478999999999999999999999999998654
No 224
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=327.80 Aligned_cols=249 Identities=24% Similarity=0.406 Sum_probs=192.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeee------cCeEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE------EGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~------~~~~~L 599 (854)
+.+.+.||+|+||.||+|++. +++.||||++.... .....+.+|+.+++++ +||||+++++++.. .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 345689999999999999985 68999999987543 3456788999999998 89999999999976 467899
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~ 679 (854)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 105 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 99999999999999643 235688889999999999999999998 9999999999999999999999999998755
Q ss_pred cCCCCceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 680 VDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
.... .......||+.|+|||.+. +..++.++|||||||++|||++|+.||...... .... . +....
T Consensus 180 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~---~-~~~~~ 250 (326)
T 2x7f_A 180 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALF---L-IPRNP 250 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH---H-HHHSC
T ss_pred CcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHH---H-hhcCc
Confidence 3322 1223346899999999987 567889999999999999999999999654311 1111 1 11111
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...++ ..+.+++.+|++.+|++||++.|++++
T Consensus 251 ~~~~~----~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 251 APRLK----SKKWS----KKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CCCCS----CSCSC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCC----ccccC----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 11122 357899999999999999999999885
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.3e-36 Score=338.19 Aligned_cols=266 Identities=20% Similarity=0.253 Sum_probs=187.1
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeeecCe-------EE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-------SV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~-------~~ 598 (854)
.+.+.+.||+|+||.||+|+.. +++.||||++..... ......+|++.++.++||||+++++++...+. .+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp TEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence 4455789999999999999986 689999999865432 23456678888899999999999999966443 78
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH--hCCCCceecCCCCCCCEEEcC-CCcEEEEeeec
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--TGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGL 675 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDIkp~NILl~~-~~~vkl~DFGl 675 (854)
+||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 99999986 565555444345667888899999999999999999 76 9999999999999997 89999999999
Q ss_pred cccccCCCCceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-------
Q 003039 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK------- 747 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~------- 747 (854)
++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.....
T Consensus 179 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 179 AKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp CBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHH
Confidence 986544322 2344689999999998765 489999999999999999999999976542222212211100
Q ss_pred Hhhhc-CCcccccCcc------ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 748 LHIES-GDIQGIIDPS------LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~-~~~~~~id~~------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.. .......+.. ............+.+++.+|++.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000 0000000000 0011112234578999999999999999999999986
No 226
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.8e-36 Score=338.38 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=179.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeec------CeEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~------~~~~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++... ...+
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 445688999999999999875 68899999986532 23456788999999999999999999998654 5679
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+|+|++ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 111 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 999999 6899888742 4688999999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.. ..... ..+
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~----~~g~p-~~~ 252 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR----LVGTP-GAE 252 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH----HHCSC-CHH
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH----HhCCC-CHH
Confidence 4322 234568999999999887 6789999999999999999999999976542111111111 10000 000
Q ss_pred ccCc-----------cc--cCcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 758 IIDP-----------SL--LDEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~-----------~l--~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.. .+ ...... .....+.+|+.+|++.||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 00 000011 112457899999999999999999999986
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=327.43 Aligned_cols=262 Identities=21% Similarity=0.258 Sum_probs=190.0
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeee--------------
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-------------- 592 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~-------------- 592 (854)
|.+.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 345688999999999999987 48999999998666566678899999999999999999999873
Q ss_pred ecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcEEEE
Q 003039 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVS 671 (854)
Q Consensus 593 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~vkl~ 671 (854)
.....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999998 699998842 4578889999999999999999998 999999999999997 56799999
Q ss_pred eeeccccccCCCC--ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH--
Q 003039 672 DFGLSKFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-- 746 (854)
Q Consensus 672 DFGla~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~-- 746 (854)
|||+++....... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986543211 12233457999999998875 678999999999999999999999997654211111111000
Q ss_pred -----HHhhhcCCcccccCcccc-Cc-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 747 -----KLHIESGDIQGIIDPSLL-DE-----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 -----~~~~~~~~~~~~id~~l~-~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+. ..+...+..... .. ........+.+++.+|++.+|++|||+.|+++|
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 244 VHEEDRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCHHHHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Cchhhhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 000000000000 00 001123468899999999999999999999875
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1e-36 Score=337.93 Aligned_cols=259 Identities=22% Similarity=0.279 Sum_probs=194.1
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeec-----CeEEEE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~-----~~~~LV 600 (854)
+.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ...++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 345688999999999999986 68899999996543 23355688999999999999999999988654 678999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 93 QELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp ECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99997 589888843 4588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc---------eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003039 681 DGASH---------VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 681 ~~~~~---------~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~ 239 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ----LLLIFGII 239 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHh
Confidence 32211 1223468999999998764 6789999999999999999999999976542111 11111111
Q ss_pred hcCC----cccccCc-------cc--cCcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 751 ESGD----IQGIIDP-------SL--LDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~----~~~~id~-------~l--~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+..+ .+ ..... ......+.+++.+|++.||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000000 00 00000 1122457899999999999999999999885
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.7e-36 Score=330.76 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=191.8
Q ss_pred HHhhccccccCceEEEEEEECCCcEEEEEEEccCC--cccHHHHHHHHHHHccCC--CCceeeEeeeeeecCeEEEEEEe
Q 003039 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~--HpnIv~l~g~~~~~~~~~LV~E~ 603 (854)
|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|++++++++ ||||+++++++...+..++|||
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 108 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 108 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-
Confidence 44578999999999999999889999999997543 234567889999999997 5999999999999999999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCC
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~ 683 (854)
+.+++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||+++ +.+||+|||+++......
T Consensus 109 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 109 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 668899999853 34688889999999999999999998 9999999999999964 899999999998654332
Q ss_pred Cc-eeecccccccccCcccccc-----------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003039 684 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 684 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.. ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..... ..........
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~~~ 254 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAIID 254 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHC
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHHHHHh
Confidence 22 2234568999999999875 4678899999999999999999999965331 1111111111
Q ss_pred cCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003039 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.. ....++......+.+++.+|++.+|++||++.|++++-
T Consensus 255 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 255 PN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp TT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cc---------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11 11111111124578999999999999999999999863
No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.6e-36 Score=330.75 Aligned_cols=264 Identities=21% Similarity=0.290 Sum_probs=195.3
Q ss_pred HHhhccccccCceEEEEEEEC--CCcEEEEEEEccCCc--ccHHHHHHHHHHHccC---CCCceeeEeeeee-----ecC
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI---HHRNLVQFLGYCQ-----EEG 595 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~--~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l---~HpnIv~l~g~~~-----~~~ 595 (854)
|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.+++.+ +||||+++++++. ...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 446789999999999999983 578999999864321 2233566777777766 8999999999987 556
Q ss_pred eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeec
Q 003039 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGl 675 (854)
..++||||+. |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred eEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcc
Confidence 7899999998 6999998643 233488999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003039 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.............
T Consensus 167 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 9754322 12234568999999999999999999999999999999999999997654221111111110000000000
Q ss_pred ccc------cC---ccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 756 QGI------ID---PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~------id---~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... +. ..............+.+++.+|++.+|++||++.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 00 000001111223457899999999999999999999875
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.4e-36 Score=334.04 Aligned_cols=258 Identities=20% Similarity=0.289 Sum_probs=192.4
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCeE------E
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS------V 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~------~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+.. +
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 445688999999999999876 689999999975432 2356788999999999999999999999877654 9
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+. ++|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 124 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 9999997 58887773 3488999999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh--cCCc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE--SGDI 755 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~--~~~~ 755 (854)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+......... ...+
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 269 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 269 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence 4322 234568999999999987 78899999999999999999999999765422211111110000000 0000
Q ss_pred c--------cccCccccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 756 Q--------GIIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~--------~~id~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..+....... ........+.+++.+|++.+|++|||+.|+++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000000000 001123468899999999999999999999986
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.9e-36 Score=320.82 Aligned_cols=252 Identities=27% Similarity=0.370 Sum_probs=200.9
Q ss_pred HHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEE
Q 003039 524 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV 600 (854)
....|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3446667899999999999999986 68999999986542 23467789999999999999999999999999999999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC---CcEEEEeeeccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSK 677 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~vkl~DFGla~ 677 (854)
+||+++++|.+++.. ...+++..++.++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999988843 34688999999999999999999998 99999999999999764 479999999997
Q ss_pred cccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003039 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
....... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... .+.. .+..+....
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~~ 241 (287)
T 2wei_A 173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILK----RVETGKYAF 241 (287)
T ss_dssp TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCCC
T ss_pred eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH----HHHH----HHHcCCCCC
Confidence 6543321 223458999999998865 4899999999999999999999999764411 1111 122222111
Q ss_pred ccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....... ...+.+++.+|++.+|++|||+.|++++
T Consensus 242 --~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 --DLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --CSGGGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --Cchhhhhc----CHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00001112 2357899999999999999999999985
No 233
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-35 Score=326.45 Aligned_cols=262 Identities=20% Similarity=0.264 Sum_probs=198.7
Q ss_pred HHHhhccccccCceEEEEEEE-C-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCC------ceeeEeeeeeecCeEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKL-K-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR------NLVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~-~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hp------nIv~l~g~~~~~~~~~ 598 (854)
.|.+.+.||+|+||.||+|.. . +++.||||+++.. ......+.+|+++++.++|+ +++++++++...+..+
T Consensus 15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 455678999999999999987 3 6889999999643 23356788899999988765 4999999999999999
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC--------------
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------------- 664 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-------------- 664 (854)
+||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 94 lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 999999 88999998542 223578899999999999999999998 9999999999999987
Q ss_pred -----CCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003039 665 -----HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 665 -----~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~ 739 (854)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 678999999999764332 23346899999999999999999999999999999999999999764421111
Q ss_pred cchHHHHHH----hhhcCCcccccC--------------------ccc--cCcCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 003039 740 RNIVQWAKL----HIESGDIQGIID--------------------PSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSI 793 (854)
Q Consensus 740 ~~l~~~~~~----~~~~~~~~~~id--------------------~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm 793 (854)
..+...... ............ ..+ ...........+.+++.+|++.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111000000 000000000000 000 001123445678999999999999999999
Q ss_pred HHHHHH
Q 003039 794 SEVLKD 799 (854)
Q Consensus 794 ~eV~~~ 799 (854)
.||++|
T Consensus 324 ~ell~h 329 (339)
T 1z57_A 324 REALKH 329 (339)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999876
No 234
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-35 Score=339.33 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=185.5
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEeccCCCH
Q 003039 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
.+.||+|+||+||.+...+|+.||||++... ....+.+|+++++++ +||||+++++++...+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 5789999999998776677999999998643 245678899999876 89999999999999999999999996 699
Q ss_pred Hhhhccccccccc---ccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCC-------------CcEEEEee
Q 003039 610 KEHLYGTLTHEQR---INWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-------------MRAKVSDF 673 (854)
Q Consensus 610 ~~~L~~~~~~~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-------------~~vkl~DF 673 (854)
.+++......... ..+..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999654222111 23445678999999999999998 99999999999999754 48999999
Q ss_pred eccccccCCCCc---eeecccccccccCcccccc-------CcCCCcchhhhHHHHHHHHHh-CCcccccccccccccch
Q 003039 674 GLSKFAVDGASH---VSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 742 (854)
Q Consensus 674 Gla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~-------~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l 742 (854)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~ 247 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-----E 247 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----H
Confidence 999866543322 1234569999999999975 678999999999999999999 99999654311 1
Q ss_pred HHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... . +.+...........+.+++.+|++.+|++|||+.||++|
T Consensus 248 ~~i~~~~~~---~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 SNIIRGIFS---L-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHHHHTCCC---C-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCCC---c-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 111111100 0 011111234455678999999999999999999999975
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.1e-35 Score=330.31 Aligned_cols=199 Identities=25% Similarity=0.299 Sum_probs=166.7
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CC-----ceeeEeeeeeecCeEEE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HR-----NLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-Hp-----nIv~l~g~~~~~~~~~L 599 (854)
.|.+.+.||+|+||+||+|... +++.||||+++.. .....++..|+++++.++ |+ +|+++++++...+..++
T Consensus 55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 133 (382)
T 2vx3_A 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL 133 (382)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence 3456789999999999999876 5789999999743 233456778888888874 44 49999999999999999
Q ss_pred EEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc--CCCcEEEEeeeccc
Q 003039 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHMRAKVSDFGLSK 677 (854)
Q Consensus 600 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~--~~~~vkl~DFGla~ 677 (854)
||||+. |+|.+++... ....+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 134 v~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 999996 5999998643 224588999999999999999999952 12899999999999995 47889999999998
Q ss_pred cccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003039 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~ 734 (854)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 65432 233568999999999999999999999999999999999999998654
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.1e-35 Score=326.44 Aligned_cols=253 Identities=26% Similarity=0.330 Sum_probs=174.9
Q ss_pred hhccccccCceEEEEEEEC-CCcEEEEEEEccCCc-ccHHHHHHHHH-HHccCCCCceeeEeeeeeecCeEEEEEEeccC
Q 003039 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-~~~~~~~~Ev~-~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~~ 606 (854)
+.+.||+|+||.||+|... +++.||||++..... ....++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 4678999999999999986 689999999976532 23345555665 77888999999999999999999999999985
Q ss_pred CCHHhhhcccc-cccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCc
Q 003039 607 GTLKEHLYGTL-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 607 gsL~~~L~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 685 (854)
+|.+++.... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 180 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-- 180 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc--
Confidence 7877774321 1245688999999999999999999985 289999999999999999999999999997654322
Q ss_pred eeecccccccccCcccc----ccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 686 VSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~----~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......||+.|+|||.+ .+..++.++|||||||++|||++|+.||...... .+.... ...+.. +
T Consensus 181 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~-~~~~~~-----~ 248 (327)
T 3aln_A 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV------FDQLTQ-VVKGDP-----P 248 (327)
T ss_dssp -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CC-CCCSCC-----C
T ss_pred ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH------HHHHHH-HhcCCC-----C
Confidence 12233689999999998 4567899999999999999999999999753310 000000 001111 1
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+...........+.+++.+|++.+|++||++.||+++
T Consensus 249 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 11111111123468899999999999999999999875
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=328.10 Aligned_cols=255 Identities=21% Similarity=0.306 Sum_probs=191.7
Q ss_pred HHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCc--ccHHHHHHHHHHHccCCCCceeeEeeeeeecCe------EE
Q 003039 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~--~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~------~~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 345678999999999999876 689999999975432 234678899999999999999999999977654 49
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+. |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 106 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 9999997 58887763 2488899999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-----------
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA----------- 746 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~----------- 746 (854)
.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+....
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4322 233468999999999887 678999999999999999999999997654211111111100
Q ss_pred -----HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 747 -----KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 -----~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... .+.....+.+. .........+.+++.+|++.||++|||+.|+++|
T Consensus 252 ~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 252 NDKAAKSYIQ--SLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp SCHHHHHHHH--TSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhHHHHHHHH--hCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 00000000000 0111223468899999999999999999999876
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.6e-35 Score=325.06 Aligned_cols=247 Identities=20% Similarity=0.261 Sum_probs=167.9
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeeeeee----cCeEEEEEEecc
Q 003039 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~----~~~~~LV~E~~~ 605 (854)
.+.||+|+||.||+|+.. +++.||||++... .....+....++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 356999999999999987 6899999998643 1222233344566799999999999876 455899999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeeeccccccCC
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkl~DFGla~~~~~~ 682 (854)
+|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 110 GGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999999643 234689999999999999999999998 9999999999999986 455999999999755432
Q ss_pred CCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCcc
Q 003039 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.............. .+..+... ....
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~--~~~~ 255 (336)
T 3fhr_A 185 ---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR----RIRLGQYG--FPNP 255 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------C--CCTT
T ss_pred ---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH----hhhccccc--cCch
Confidence 22345689999999999988999999999999999999999999975542211111111 11111000 0000
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ....+.+++.+|++.+|++|||+.|++++
T Consensus 256 ~~~~----~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 EWSE----VSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TSTT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhcc----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111 23457899999999999999999999985
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-36 Score=326.80 Aligned_cols=244 Identities=25% Similarity=0.387 Sum_probs=189.6
Q ss_pred HHHHHHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc------cHHHHHHHHHHHccC----CCCceeeEeee
Q 003039 522 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRI----HHRNLVQFLGY 590 (854)
Q Consensus 522 ~~~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~------~~~~~~~Ev~~L~~l----~HpnIv~l~g~ 590 (854)
+.....|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344456777899999999999999875 6889999999754321 223456788888888 89999999999
Q ss_pred eeecCeEEEEEEe-ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcE
Q 003039 591 CQEEGRSVLVYEF-MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRA 668 (854)
Q Consensus 591 ~~~~~~~~LV~E~-~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~v 668 (854)
+...+..++|+|+ +.+++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 789999999853 34588999999999999999999998 999999999999999 88999
Q ss_pred EEEeeeccccccCCCCceeecccccccccCccccccCcCC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH
Q 003039 669 KVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 669 kl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~ 747 (854)
||+|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||.... .+.
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~---- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EIL---- 246 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHH----
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHh----
Confidence 999999998654322 2344689999999999876664 48999999999999999999996532 110
Q ss_pred HhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... .+.... ...+.+++.+|++.+|++||++.|++++
T Consensus 247 ----~~~~------~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 ----EAEL------HFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----HTCC------CCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----hhcc------CCcccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0100 011122 2357899999999999999999999986
No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.1e-35 Score=326.94 Aligned_cols=259 Identities=20% Similarity=0.258 Sum_probs=197.1
Q ss_pred HHHHhhccccccCceEEEEEEEC-CC-cEEEEEEEccCCcccHHHHHHHHHHHccCCCCc------eeeEeeeeeecCeE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DG-KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~-~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn------Iv~l~g~~~~~~~~ 597 (854)
..|.+.+.||+|+||.||+|... ++ +.||||+++.. ......+.+|++++++++|++ ++.+.+++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 34566789999999999999875 34 68999999743 234567888999999997665 89999999999999
Q ss_pred EEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEE---------------
Q 003039 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--------------- 662 (854)
Q Consensus 598 ~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl--------------- 662 (854)
++||||+ +++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 9999999 66777776432 234688999999999999999999998 99999999999999
Q ss_pred ----cCCCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc
Q 003039 663 ----DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 738 (854)
Q Consensus 663 ----~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~ 738 (854)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 67889999999999764332 2334699999999999999999999999999999999999999976442111
Q ss_pred ccchHHHHHHhhhc--------CCcccc-cCcc-------------------c--cCcCCHHHHHHHHHHHHHccCCCCC
Q 003039 739 CRNIVQWAKLHIES--------GDIQGI-IDPS-------------------L--LDEYDIQSMWKIEEKALMCVLPHGH 788 (854)
Q Consensus 739 ~~~l~~~~~~~~~~--------~~~~~~-id~~-------------------l--~~~~~~~~~~~l~~l~~~Cl~~~P~ 788 (854)
.......... ...... .... + .......+...+.+++.+|++.||+
T Consensus 248 ----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 248 ----LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp ----HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred ----HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 1111111000 000000 0000 0 0011223345788999999999999
Q ss_pred CCCCHHHHHHH
Q 003039 789 MRPSISEVLKD 799 (854)
Q Consensus 789 ~RPsm~eV~~~ 799 (854)
+|||+.|+++|
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999976
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-35 Score=329.64 Aligned_cols=263 Identities=20% Similarity=0.339 Sum_probs=196.3
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-----------CCceeeEeeeeeec
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----------HRNLVQFLGYCQEE 594 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-----------HpnIv~l~g~~~~~ 594 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|++++++++ ||||+++++++...
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 4556789999999999999875 6899999999743 233567888999998886 89999999999765
Q ss_pred C----eEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc------C
Q 003039 595 G----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD------K 664 (854)
Q Consensus 595 ~----~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~------~ 664 (854)
+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++ .
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 4 789999999 88999998643 2345889999999999999999999952 899999999999994 4
Q ss_pred CCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc---ccc
Q 003039 665 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN---CRN 741 (854)
Q Consensus 665 ~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~---~~~ 741 (854)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999765432 2334689999999999999999999999999999999999999975442111 111
Q ss_pred hHHHHHHh-----------------hhcCC-cccccCccc---------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 003039 742 IVQWAKLH-----------------IESGD-IQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSIS 794 (854)
Q Consensus 742 l~~~~~~~-----------------~~~~~-~~~~id~~l---------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~ 794 (854)
+....... +.... ...+..... ...++......+.+++.+|++.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 11111000 00000 000000000 1123456677899999999999999999999
Q ss_pred HHHHH
Q 003039 795 EVLKD 799 (854)
Q Consensus 795 eV~~~ 799 (854)
||++|
T Consensus 330 ell~h 334 (373)
T 1q8y_A 330 GLVNH 334 (373)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99885
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.5e-36 Score=328.04 Aligned_cols=244 Identities=23% Similarity=0.380 Sum_probs=197.0
Q ss_pred HHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc------cHHHHHHHHHHHccCC--CCceeeEeeeeeecCeE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~------~~~~~~~Ev~~L~~l~--HpnIv~l~g~~~~~~~~ 597 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++ |+||+++++++...+..
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~ 123 (320)
T 3a99_A 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 123 (320)
T ss_dssp TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcE
Confidence 4556789999999999999875 6889999998754321 2245678999999996 59999999999999999
Q ss_pred EEEEEeccC-CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEc-CCCcEEEEeeec
Q 003039 598 VLVYEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGL 675 (854)
Q Consensus 598 ~LV~E~~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~vkl~DFGl 675 (854)
++|+|++.+ ++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+
T Consensus 124 ~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999986 899999853 45688999999999999999999998 999999999999999 789999999999
Q ss_pred cccccCCCCceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .+ . .+.
T Consensus 197 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~-------~-~~~ 259 (320)
T 3a99_A 197 GALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EI-------I-RGQ 259 (320)
T ss_dssp CEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HH-------H-HCC
T ss_pred ccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hh-------h-ccc
Confidence 9865432 2233468999999999987665 678999999999999999999996532 00 0 111
Q ss_pred cccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHHH
Q 003039 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDAI 804 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~~ 804 (854)
. .+....+ ..+.+++.+|++.+|++||++.||+++ +++..
T Consensus 260 ~------~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 260 V------FFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp C------CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred c------cccccCC----HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 0 0111222 357899999999999999999999986 44443
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=329.51 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=183.2
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEEEEeccCC
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
.+.+.||+|+||+||.....+++.||||++...... .+.+|+++|+++ +||||+++++++.+.+..++||||+. |
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 345789999999976655667999999998654322 356799999999 79999999999999999999999996 5
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC-----CCcEEEEeeeccccccCC
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----HMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-----~~~vkl~DFGla~~~~~~ 682 (854)
+|.+++... ...+.+..++.++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 103 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 103 TLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp EHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 999998643 22344556678999999999999998 9999999999999953 346889999999865433
Q ss_pred CC--ceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcc
Q 003039 683 AS--HVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 683 ~~--~~~~~~~gt~~Y~aPE~~~---~~~~s~~~DVwSlGvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.. .......||+.|+|||++. ...++.++|||||||++|||++ |..||..... ............
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~- 247 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--------RQANILLGACSL- 247 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--------HHHHHHTTCCCC-
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--------HHHHHHhccCCc-
Confidence 22 2234456999999999997 4567889999999999999999 9999854321 111111111111
Q ss_pred cccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ........+.+++.+|++.+|++|||+.||++|
T Consensus 248 ~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 DCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 1110 112233457899999999999999999999975
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=316.26 Aligned_cols=248 Identities=24% Similarity=0.296 Sum_probs=175.4
Q ss_pred HhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc-c-HHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEEecc
Q 003039 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-G-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~-~-~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E~~~ 605 (854)
.+.+.||+|+||.||+|+.. +|+.||||++...... . .+.+.++..+++.++||||+++++++...+..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 35678999999999999986 6899999999755322 2 233445556788889999999999999999999999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCC
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~ 684 (854)
++.+..+... ....+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 107 GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 4455444421 23568899999999999999999998 4 89999999999999999999999999997554322
Q ss_pred ceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003039 685 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
......||+.|+|||.+. ...++.++|||||||++|||++|+.||..... ............. ....
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~-~~~~ 251 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT------DFEVLTKVLQEEP-PLLP 251 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHHSCC-CCCC
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc------cHHHHHHHhccCC-CCCC
Confidence 223346899999999984 45688999999999999999999999975331 1111111111111 0000
Q ss_pred CccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .... ...+.+++.+|++.+|.+||++.||+++
T Consensus 252 ~---~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 252 G---HMGF----SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp S---SSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred c---cCCC----CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 0112 2357899999999999999999999876
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-34 Score=345.96 Aligned_cols=240 Identities=19% Similarity=0.276 Sum_probs=192.8
Q ss_pred HHHhhccccccCceEEEEEEEC--CCcEEEEEEEccCC-cccHHHHHHHHHHHccCCCCceeeEeeeeeecCe-----EE
Q 003039 527 TKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-----SV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~a~~~--~~~~VAvK~l~~~~-~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~-----~~ 598 (854)
.|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++...+. .+
T Consensus 81 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~ 160 (681)
T 2pzi_A 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY 160 (681)
T ss_dssp TEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred ceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeE
Confidence 4566789999999999999986 58999999986443 3345678899999999999999999999987665 79
Q ss_pred EEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+||||+++++|.+++.. .+++..++.++.||+.||+|||++ +|+||||||+|||++.+ .+||+|||+++.
T Consensus 161 lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 161 IVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred EEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 99999999999887632 688999999999999999999998 99999999999999986 999999999986
Q ss_pred ccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003039 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.... ....||++|+|||++.+.. +.++|||||||++|||++|..||.........
T Consensus 231 ~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------- 285 (681)
T 2pzi_A 231 INSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------- 285 (681)
T ss_dssp TTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC-------------------
T ss_pred cccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc-------------------
Confidence 5432 3346999999999987654 88999999999999999999888653211100
Q ss_pred cCccccCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHHH
Q 003039 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIVI 806 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~~ 806 (854)
...........+.+++.+|++.+|++|| +++++.+.|..++..
T Consensus 286 -----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 -----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp -----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred -----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0000112234688999999999999999 567777778776543
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6e-35 Score=344.36 Aligned_cols=267 Identities=23% Similarity=0.328 Sum_probs=200.4
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccC-CcccHHHHHHHHHHHccCCCCceeeEeeeeee------cCeE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~-~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~------~~~~ 597 (854)
..|.+.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 35677899999999999999875 6899999998754 33345678999999999999999999999765 6678
Q ss_pred EEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCc---EEEEeee
Q 003039 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFG 674 (854)
Q Consensus 598 ~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---vkl~DFG 674 (854)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 99999999999999996532 234588889999999999999999998 9999999999999997765 9999999
Q ss_pred ccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003039 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...|.......+.
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~------~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ------PVQWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH------HHHSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc------hhhhhhhhhcccc
Confidence 998654432 22345699999999999999999999999999999999999999965421 1111111000000
Q ss_pred c----ccccCcc------c--cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHH-----HHHHHHHH
Q 003039 755 I----QGIIDPS------L--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEV-----LKDIQDAI 804 (854)
Q Consensus 755 ~----~~~id~~------l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV-----~~~L~~~~ 804 (854)
. .+..... + ...........+.+++..|++.||++|||+.|+ .+.++.++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 0 0000000 0 112233455678999999999999999999884 44455544
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-34 Score=324.50 Aligned_cols=239 Identities=13% Similarity=0.094 Sum_probs=179.0
Q ss_pred hhccccccCceEEEEEEEC-CCcEEEEEEEccCCc---ccHHHHHHHHHHHccCCC-Cceee------------------
Q 003039 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHH-RNLVQ------------------ 586 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~---~~~~~~~~Ev~~L~~l~H-pnIv~------------------ 586 (854)
+.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|...
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 3578999999999999965 689999999874322 235678999999999987 32211
Q ss_pred ---Eeeeeee-----cCeEEEEEEeccCCCHHhhhccc---ccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCC
Q 003039 587 ---FLGYCQE-----EGRSVLVYEFMHNGTLKEHLYGT---LTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL 655 (854)
Q Consensus 587 ---l~g~~~~-----~~~~~LV~E~~~~gsL~~~L~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDI 655 (854)
+..++.. ....+++|+++ +++|.+++... ......+++..++.++.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12456777755 68999888422 22355688999999999999999999998 9999999
Q ss_pred CCCCEEEcCCCcEEEEeeeccccccCCCCceeecccccccccCcccc----------ccCcCCCcchhhhHHHHHHHHHh
Q 003039 656 KSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYY----------ISQQLTDKSDVYSFGVILLELIS 725 (854)
Q Consensus 656 kp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~s~~~DVwSlGvvl~ellt 725 (854)
||+|||++.++.+||+|||+++.... ......| +.|+|||++ ....++.++|||||||++|||++
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGA----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTE----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCC----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999875432 2344567 999999999 55668889999999999999999
Q ss_pred CCcccccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 726 GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 726 G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
|+.||......+.... ++.. ....+ ..+.+++.+|++.+|++||++.|++++
T Consensus 313 g~~Pf~~~~~~~~~~~----------------~~~~--~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 313 ADLPNTDDAALGGSEW----------------IFRS--CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp SSCCCCTTGGGSCSGG----------------GGSS--CCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCcchhhhHHH----------------HHhh--cccCC----HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999976542221111 1110 01122 458899999999999999999998765
No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.4e-34 Score=307.88 Aligned_cols=232 Identities=15% Similarity=0.152 Sum_probs=180.9
Q ss_pred HHHHhhccccccCceEEEEEEEC-CCcEEEEEEEccCCcc---cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEE
Q 003039 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~---~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~ 601 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34667789999999999999986 4899999999765332 2367889999999999999999999999999999999
Q ss_pred EeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccC
Q 003039 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~ 681 (854)
||+++++|.+++... ....++..++.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999998432 23446788999999999999998 99999999999999999999997443
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
|++| ++.++|||||||++|||++|+.||.............. .. .+.. ..+
T Consensus 175 --------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~----~~-~~~~---~~~ 225 (286)
T 3uqc_A 175 --------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER----DT-AGQP---IEP 225 (286)
T ss_dssp --------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB----CT-TSCB---CCH
T ss_pred --------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH----Hh-ccCC---CCh
Confidence 3333 67899999999999999999999986552211100000 00 0000 000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003039 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..........+.+++.+|++.||++| |+.|+++.|+++...
T Consensus 226 ---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 226 ---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp ---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred ---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 00011122458899999999999999 999999999997654
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.6e-34 Score=314.13 Aligned_cols=245 Identities=18% Similarity=0.189 Sum_probs=184.4
Q ss_pred HHHHHHhhccccccCceEEEEEEECCCcEEEEEEEccCCc--------ccHHHHHHHHHHHccCC---------CCceee
Q 003039 524 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIH---------HRNLVQ 586 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~--------~~~~~~~~Ev~~L~~l~---------HpnIv~ 586 (854)
....|.+.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+++++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 345677889999999999999998 589999999975421 22367889999988885 777777
Q ss_pred Eeeee-----------------ee-------------cCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHH
Q 003039 587 FLGYC-----------------QE-------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAA 636 (854)
Q Consensus 587 l~g~~-----------------~~-------------~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia 636 (854)
+.+.+ .. .+..++||||+++|++.+.+.. ..+++..+..++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 66653 22 6789999999999977666632 4578999999999999
Q ss_pred HHHHHHH-hCCCCceecCCCCCCCEEEcCCC--------------------cEEEEeeeccccccCCCCceeeccccccc
Q 003039 637 KGIEYLH-TGCVPAIIHRDLKSSNILLDKHM--------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 695 (854)
Q Consensus 637 ~gL~yLH-~~~~~~ivHrDIkp~NILl~~~~--------------------~vkl~DFGla~~~~~~~~~~~~~~~gt~~ 695 (854)
.||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 88 999999999999999887 8999999999865432 2369999
Q ss_pred ccCccccccCcCCCcchhhhHHHH-HHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCccccCcCCHHHHHH
Q 003039 696 YLDPEYYISQQLTDKSDVYSFGVI-LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWK 774 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~~DVwSlGvv-l~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~ 774 (854)
|+|||++.+.. +.++||||+|++ .+++++|..||...... ..+.+ ........ ...............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~---~~~~~~~~----~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTD---KMLKQMTF----KTKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHH---HHHHTCCC----SSCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHH---hhhhhhcc----CcccchhhhhhcCHH
Confidence 99999998766 889999998777 78899999998542100 00111 11111000 011111122345667
Q ss_pred HHHHHHHccCCCCCCCCCHHHHH-HH
Q 003039 775 IEEKALMCVLPHGHMRPSISEVL-KD 799 (854)
Q Consensus 775 l~~l~~~Cl~~~P~~RPsm~eV~-~~ 799 (854)
+.+|+.+|++.+ |++|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 899988 54
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-32 Score=298.89 Aligned_cols=222 Identities=22% Similarity=0.269 Sum_probs=173.9
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHH-ccCCCCceeeEeeeeee----cCeEEEEEEec
Q 003039 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLL-SRIHHRNLVQFLGYCQE----EGRSVLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L-~~l~HpnIv~l~g~~~~----~~~~~LV~E~~ 604 (854)
.+.||+|+||.||+|... +++.||||+++. ...+.+|++++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 367999999999999875 689999999863 34567888887 55699999999999976 67889999999
Q ss_pred cCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcC---CCcEEEEeeeccccccC
Q 003039 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkl~DFGla~~~~~ 681 (854)
++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999999643 234689999999999999999999998 9999999999999998 7899999999986432
Q ss_pred CCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCc
Q 003039 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
+..++.++|||||||++|||++|+.||...........+ ...+...
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~------------~~~~~~~ 217 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM------------KTRIRMG 217 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS------------CCSSCTT
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH------------HHHHhhc
Confidence 235678999999999999999999999654311100000 0000000
Q ss_pred cccCcCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003039 762 SLLDEYDI----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ...+. .....+.+++.+|++.+|++|||+.|+++|
T Consensus 218 ~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 218 Q--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp C--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 00111 123468899999999999999999999986
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.8e-28 Score=285.56 Aligned_cols=186 Identities=16% Similarity=0.111 Sum_probs=130.8
Q ss_pred cccccCceEEEEEE-ECCCcEEEEEEEccCCc----------ccHHHHHHHHHHHccC-CCCceeeEeeeeeecCeEEEE
Q 003039 533 KIGSGGFGVVYYGK-LKDGKEIAVKVLTSNSY----------QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 533 ~iG~G~fg~Vy~a~-~~~~~~VAvK~l~~~~~----------~~~~~~~~Ev~~L~~l-~HpnIv~l~g~~~~~~~~~LV 600 (854)
..+.|++|.+..++ ..-|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45677777666653 23588999999975421 1235689999999999 799999999999999999999
Q ss_pred EEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeecccccc
Q 003039 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~ 680 (854)
|||++|++|.+.|.. ...++. .+|+.||+.||+|||++ |||||||||+||||+.++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999953 334443 35899999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccc
Q 003039 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf 730 (854)
... ......+||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 391 ~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 432 23345679999999999875 4677899999999999888776654
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.1e-25 Score=259.27 Aligned_cols=182 Identities=18% Similarity=0.227 Sum_probs=145.6
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEEccCCcc--------cHHHHHHHHHHHccCCCCceeeEeeeeeecCeEEEEEE
Q 003039 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~--------~~~~~~~Ev~~L~~l~HpnIv~l~g~~~~~~~~~LV~E 602 (854)
.+.||+|+||.||+|... ++.+++|+....... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999654 789999987543221 13457899999999999999976666667778899999
Q ss_pred eccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCC
Q 003039 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~ 682 (854)
|+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 420 YINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp CCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred CCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999853 457899999999999998 9999999999999999 9999999999876543
Q ss_pred CCce------eecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCccc
Q 003039 683 ASHV------SSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 683 ~~~~------~~~~~gt~~Y~aPE~~~~--~~~s~~~DVwSlGvvl~elltG~~pf 730 (854)
.... .....||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2211 235679999999999987 67888999999998888888777665
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=9.5e-22 Score=210.85 Aligned_cols=141 Identities=17% Similarity=0.101 Sum_probs=114.5
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEEccCCc------------------ccHHHHHHHHHHHccCCCCceeeEeeeee
Q 003039 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY------------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~------------------~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~ 592 (854)
.+.||+|+||.||+|.+.+|+.||||+++.... .....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 488999999999999997799999999964321 12456889999999999 4 56666554
Q ss_pred ecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEe
Q 003039 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 593 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~D 672 (854)
. +..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+|||++ ++.+||+|
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEE
Confidence 3 55699999999999988 421 12346999999999999998 999999999999999 99999999
Q ss_pred eeccccccCCCCceeecccccccccCcccccc
Q 003039 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS 704 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 704 (854)
||+|+. +..++|||++..
T Consensus 236 FG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHHHH
Confidence 999863 445789998753
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.75 E-value=4.7e-19 Score=216.51 Aligned_cols=113 Identities=28% Similarity=0.433 Sum_probs=106.0
Q ss_pred CCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCcee
Q 003039 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l 417 (854)
.+++|+.|||++|+|+|.+|.+|++|++|+.|+|++|+|+|.+|. +++|++|+.|||++|+|+|.+|..++.|++|+.|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 457899999999999999999999999999999999999999886 8999999999999999999999999999999999
Q ss_pred ecccccccccccccc-ccccccccccCccccccCC
Q 003039 418 YVQNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 418 ~l~~N~l~g~~p~~l-~~~~~~l~~~~n~~l~~~~ 451 (854)
+|++|+|+|.||... +..+..+++.||+++|+.+
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 999999999999875 6777788899999999864
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=5.5e-18 Score=179.14 Aligned_cols=134 Identities=24% Similarity=0.267 Sum_probs=103.4
Q ss_pred hhccccccCceEEEEEEE-CCCcE--EEEEEEccCCcc------------------------cHHHHHHHHHHHccCCCC
Q 003039 530 LEKKIGSGGFGVVYYGKL-KDGKE--IAVKVLTSNSYQ------------------------GKREFTNEVTLLSRIHHR 582 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~a~~-~~~~~--VAvK~l~~~~~~------------------------~~~~~~~Ev~~L~~l~Hp 582 (854)
+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+++|.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 357899999999999998 57888 999997543111 013578899999999887
Q ss_pred ce--eeEeeeeeecCeEEEEEEeccC-C----CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH-hCCCCceecCC
Q 003039 583 NL--VQFLGYCQEEGRSVLVYEFMHN-G----TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH-TGCVPAIIHRD 654 (854)
Q Consensus 583 nI--v~l~g~~~~~~~~~LV~E~~~~-g----sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrD 654 (854)
++ ...+++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 64 334432 356899999953 4 56554421 234567789999999999999 87 999999
Q ss_pred CCCCCEEEcCCCcEEEEeeeccccc
Q 003039 655 LKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 655 Ikp~NILl~~~~~vkl~DFGla~~~ 679 (854)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999654
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.70 E-value=7.2e-18 Score=183.53 Aligned_cols=181 Identities=20% Similarity=0.173 Sum_probs=145.9
Q ss_pred ccceeeeecccCCCC-CCCcccchhhhceeccCCCCCccHHHHHHHHhhc-CCCCccCCCCCCCCCCCCCee-EeCCCCC
Q 003039 264 LPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLY-SSADWAQEGGDPCLPVPWSWL-QCNSDPQ 340 (854)
Q Consensus 264 l~~l~~l~l~~n~~s-~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~-~~~~w~~~~~~pc~~~~~~~~-~c~~~~~ 340 (854)
+++|+.|+|+.|.++ .+|..+..+..|+.|+++.|.+....+..+.++. .++.+...+ | ...+. .-....+
T Consensus 124 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~---N---~l~~~~~~~~~~l 197 (313)
T 1ogq_A 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR---N---RLTGKIPPTFANL 197 (313)
T ss_dssp CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCS---S---EEEEECCGGGGGC
T ss_pred CCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcC---C---eeeccCChHHhCC
Confidence 567888888888888 6777788888899999988887644445555554 444442211 1 01110 0111223
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+ |+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|.+..+++|++|+|++|+|+|.+|..+..+++|+.|+|+
T Consensus 198 ~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 276 (313)
T 1ogq_A 198 N-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS 276 (313)
T ss_dssp C-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECC
T ss_pred c-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECc
Confidence 3 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccc-ccccccccccCccccccCC
Q 003039 421 NNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~~p~~l-~~~~~~l~~~~n~~l~~~~ 451 (854)
+|+|+|.+|... ++++..+++.+|+.+|+.+
T Consensus 277 ~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 277 FNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp SSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 999999999864 6778899999999999864
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.67 E-value=6.9e-17 Score=176.98 Aligned_cols=109 Identities=18% Similarity=0.278 Sum_probs=98.3
Q ss_pred CCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
.+++|+.|+|++|+|+ .+|..+++|++|+.|+|++|++++.++.+..+++|++|+|++|++.+.+|..++.+++|+.|+
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 3678999999999999 899999999999999999999999888899999999999999999999999999999999999
Q ss_pred cccccccccccccc--ccccccccccCccccc
Q 003039 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~ 448 (854)
|++|++.+.+|..+ +.+++.|++++|+...
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 99999999999887 6778889999987543
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.64 E-value=1.3e-16 Score=194.83 Aligned_cols=83 Identities=28% Similarity=0.436 Sum_probs=60.9
Q ss_pred CccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccccccccc--cccccccc
Q 003039 364 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLN 440 (854)
Q Consensus 364 l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~ 440 (854)
+++|+.|+|++|+++|.+|. +++|++|+.|+|++|+|+|.+|..|++|++|+.|+|++|+|+|.+|..+ +..+..|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 45667777777777776664 6777777777777777777777777777777777777777777777776 55667777
Q ss_pred ccCccc
Q 003039 441 YAGNIN 446 (854)
Q Consensus 441 ~~~n~~ 446 (854)
+++|+.
T Consensus 711 ls~N~l 716 (768)
T 3rgz_A 711 LSNNNL 716 (768)
T ss_dssp CCSSEE
T ss_pred CcCCcc
Confidence 777753
No 259
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.63 E-value=1e-15 Score=164.62 Aligned_cols=156 Identities=23% Similarity=0.263 Sum_probs=124.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+|+.|.++.+|+. ..+..|+.|+++.|++.. + .-....+++|
T Consensus 54 l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~~-----------l-------------------~~~~~~l~~L 102 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS-----------L-------------------PLLGQTLPAL 102 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCSS-----------C-------------------CCCTTTCTTC
T ss_pred CCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCCc-----------C-------------------chhhccCCCC
Confidence 45666777777777777665 666667777777766542 0 0012346789
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 103 ~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 9999999999966667899999999999999999998887 688999999999999999544456788999999999999
Q ss_pred ccccccccccc--cccccccccCccccccCC
Q 003039 423 MLSGTVPSSLL--SKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 423 ~l~g~~p~~l~--~~~~~l~~~~n~~l~~~~ 451 (854)
+|+ .+|..++ ..+..+.+.+|+..|.+.
T Consensus 183 ~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 183 SLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 999 8998884 457889999999999763
No 260
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=5e-17 Score=187.84 Aligned_cols=171 Identities=13% Similarity=0.093 Sum_probs=95.1
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCC------
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS------ 337 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~------ 337 (854)
++.|+.|+|+.|.++.++| +..+..|+.|++++|.+.... ....+..+.. .-| .+.++.|..
T Consensus 57 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L---~~N---~l~~~~~~~l~~L~~ 124 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA---ANN---NISRVSCSRGQGKKN 124 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC---CSS---CCCCEEECCCSSCEE
T ss_pred CCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC---cCC---cCCCCCccccCCCCE
Confidence 4567777777777777766 777777777777777665321 1122222211 011 122233321
Q ss_pred ----------------CCCCCeeEEEecCCCCCccCCcccc-cCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCcc
Q 003039 338 ----------------DPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQL 400 (854)
Q Consensus 338 ----------------~~~~~l~~L~L~~n~l~g~lp~~i~-~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l 400 (854)
..+++|+.|+|++|+|++.+|..+. .|++|+.|+|++|.|++. |.+..+++|+.|+|++|+|
T Consensus 125 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l 203 (487)
T 3oja_A 125 IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKL 203 (487)
T ss_dssp EECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCC
T ss_pred EECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCC
Confidence 1234555555555555555555554 455555555555555554 2333466666666666666
Q ss_pred CCCCCccccCCCCCceeecccccccccccccc--ccccccccccCcccccc
Q 003039 401 TGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHE 449 (854)
Q Consensus 401 ~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~~ 449 (854)
++ +|+.+..+++|+.|+|++|+|+ .+|..+ +.++..|++++|+..|+
T Consensus 204 ~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 204 AF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 63 4444666666666666666666 455554 34556666666666553
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.63 E-value=1.8e-15 Score=159.03 Aligned_cols=157 Identities=18% Similarity=0.197 Sum_probs=131.2
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
..++.|+|+.|.++.++|. +..+..|+.|++++|.+... .+- ....+++|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-------------------~~~----------~~~~l~~L 85 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL-------------------SAG----------VFDDLTEL 85 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC-------------------CTT----------TTTTCTTC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc-------------------CHh----------HhccCCcC
Confidence 3578899999999999885 88999999999999987641 110 01245689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|+.+++|+.|+|++|
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 9999999999976667889999999999999999998887 688999999999999999766668999999999999999
Q ss_pred cccccccccc--ccccccccccCccccccC
Q 003039 423 MLSGTVPSSL--LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 423 ~l~g~~p~~l--~~~~~~l~~~~n~~l~~~ 450 (854)
+|++..|..+ +.++..|++++|+..|..
T Consensus 166 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 166 QLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 9994444344 567889999999988863
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.63 E-value=7.3e-16 Score=163.83 Aligned_cols=179 Identities=20% Similarity=0.145 Sum_probs=130.0
Q ss_pred ceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~~l 343 (854)
.++.|+|+.|.++.+|+ .+..+..|+.|++++|.+.......+..+..++.+.... +. ...+.- ....+++|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~-n~-----l~~~~~~~~~~l~~L 111 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD-NK-----LQALPIGVFDQLVNL 111 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS-SC-----CCCCCTTTTTTCSSC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC-Cc-----CCcCCHhHcccccCC
Confidence 34566666666666665 366666666666666665543322233333333332110 00 111111 12356799
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 112 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 9999999999977777889999999999999999998886 788999999999999999766667999999999999999
Q ss_pred cccccccccc---ccccccccccCccccccCC
Q 003039 423 MLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 423 ~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
+|+ .+|... +.++..|++.+|+..|.+.
T Consensus 192 ~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 192 QLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 999 566654 4567889999999988764
No 263
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.62 E-value=2.1e-16 Score=173.18 Aligned_cols=175 Identities=15% Similarity=0.145 Sum_probs=133.7
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHh---------hcCCCCccCCCCCCCCCCCCCee
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVIS---------LYSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~---------l~~~~~w~~~~~~pc~~~~~~~~ 333 (854)
.+++|+.|+|+.|.++.+|+.+..+..|+.|+++.|......+..+.. +..++.+.... | ....+
T Consensus 125 ~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~---n---~l~~l 198 (328)
T 4fcg_A 125 QFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEW---T---GIRSL 198 (328)
T ss_dssp GGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEE---E---CCCCC
T ss_pred ccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcC---C---CcCcc
Confidence 356788888999999989888888889999988876543322222211 22233221110 0 01111
Q ss_pred EeCCCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCC
Q 003039 334 QCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP 412 (854)
Q Consensus 334 ~c~~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~ 412 (854)
.-....+++|+.|+|++|+++ .+|+.+.+|++|+.|+|++|++.+.+|. +.++++|+.|+|++|++.+.+|..+++++
T Consensus 199 p~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~ 277 (328)
T 4fcg_A 199 PASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLT 277 (328)
T ss_dssp CGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCT
T ss_pred hHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCC
Confidence 112235679999999999999 5888999999999999999999998886 89999999999999999999999999999
Q ss_pred CCceeecccccccccccccc--ccccccccccCc
Q 003039 413 NLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGN 444 (854)
Q Consensus 413 ~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n 444 (854)
+|+.|+|++|++.|.+|..+ +.++..+.+..|
T Consensus 278 ~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 278 QLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp TCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred CCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 99999999999999999988 556666666554
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.62 E-value=1.6e-15 Score=156.12 Aligned_cols=153 Identities=20% Similarity=0.202 Sum_probs=128.2
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
..+++..+.++.+|+.+. +.++.|++++|.+..+ .+- ....+++|+.|+
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i-------------------~~~----------~~~~l~~L~~L~ 62 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVI-------------------PPG----------AFSPYKKLRRID 62 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEE-------------------CTT----------SSTTCTTCCEEE
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCc-------------------CHh----------HhhCCCCCCEEE
Confidence 346778899999998775 6789999999987641 000 113456899999
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++
T Consensus 63 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 142 (220)
T 2v9t_B 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 142 (220)
T ss_dssp CCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE
Confidence 999999988899999999999999999999988887 6889999999999999998888999999999999999999994
Q ss_pred cccccc--ccccccccccCccccccCC
Q 003039 427 TVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~~p~~l--~~~~~~l~~~~n~~l~~~~ 451 (854)
..+..+ +.++..|++++|+..|.+.
T Consensus 143 ~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 143 IAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 444334 5677899999999998653
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.62 E-value=3.6e-16 Score=167.46 Aligned_cols=181 Identities=17% Similarity=0.179 Sum_probs=124.8
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCC-ccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~-~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~~ 341 (854)
++|+.|+|+.|.++.++| .+..+..|+.|+++.|. +....+..+..+..++.+...+ |. ...+. -....++
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~---n~---l~~~~~~~~~~l~ 129 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR---CG---LQELGPGLFRGLA 129 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTT---SC---CCCCCTTTTTTCT
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCC---Cc---CCEECHhHhhCCc
Confidence 344555555555555533 25555555555555554 3332233333333333332110 10 11110 1123567
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|++++..|..|..+++|+.|+|+
T Consensus 130 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209 (285)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCC
Confidence 899999999999966666799999999999999999988876 8889999999999999998889999999999999999
Q ss_pred cccccccccccc--ccccccccccCccccccCC
Q 003039 421 NNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~~p~~l--~~~~~~l~~~~n~~l~~~~ 451 (854)
+|++++..|..+ +.++..|++++|+..|.+.
T Consensus 210 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999995444334 5677889999999888653
No 266
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.62 E-value=6.1e-16 Score=176.46 Aligned_cols=180 Identities=20% Similarity=0.176 Sum_probs=147.6
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~ 341 (854)
+++|+.|+|+.|.++.+|+. +..+..|+.|++++|.+.......+..+..++.+...+ |. ....+.- ....++
T Consensus 111 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~---~~--~l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGE---LK--RLSYISEGAFEGLS 185 (440)
T ss_dssp CSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCC---CT--TCCEECTTTTTTCS
T ss_pred CccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCC---CC--CcceeCcchhhccc
Confidence 56789999999999999985 89999999999999998765555566666666553321 11 0111221 234678
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 9999999999999 787 599999999999999999998775 8999999999999999998888999999999999999
Q ss_pred cccccccccccc---ccccccccccCccccccCC
Q 003039 421 NNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
+|+|+ .+|... +.++..|++++|+..|.+.
T Consensus 264 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 264 HNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999 666655 5667889999999999874
No 267
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.62 E-value=1.6e-15 Score=161.36 Aligned_cols=179 Identities=16% Similarity=0.088 Sum_probs=134.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~-~~~~~~ 342 (854)
+..++.|++..|.++.++ .+..+..|+.|+++.|.+... ..+..+..++.+... -| ....+... ...+++
T Consensus 40 l~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~---~n---~l~~~~~~~~~~l~~ 110 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT---GN---QLQSLPNGVFDKLTN 110 (272)
T ss_dssp HTTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT---TS---CCCCCCTTTTTTCTT
T ss_pred ccceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC---CC---ccCccChhHhcCCcC
Confidence 456677777777777664 366677777777777776542 344444445444221 11 11222211 245679
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
|+.|+|++|++++..|..+.+|++|+.|+|++|+|++.++. +..+++|+.|+|++|+|++..|..++.+++|+.|+|++
T Consensus 111 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (272)
T 3rfs_A 111 LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCC
Confidence 99999999999977777789999999999999999998887 68899999999999999977777789999999999999
Q ss_pred ccccccccccc--ccccccccccCccccccCC
Q 003039 422 NMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~~~l~~~~n~~l~~~~ 451 (854)
|++++..|..+ +.++..|++.+|+..|..+
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99996555444 6778999999999887654
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=156.96 Aligned_cols=154 Identities=18% Similarity=0.182 Sum_probs=123.8
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.++++.|.++.+|+.+.. .++.|+++.|.+... .+- . ....+++|+.|+
T Consensus 14 ~~l~~s~n~l~~iP~~~~~--~~~~L~L~~N~l~~~-------------------~~~------~---~~~~l~~L~~L~ 63 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIPQ--YTAELRLNNNEFTVL-------------------EAT------G---IFKKLPQLRKIN 63 (220)
T ss_dssp TEEECCSSCCSSCCSCCCT--TCSEEECCSSCCCEE-------------------CCC------C---CGGGCTTCCEEE
T ss_pred CEeEeCCCCcccCccCCCC--CCCEEEcCCCcCCcc-------------------Cch------h---hhccCCCCCEEE
Confidence 3577889999999887643 457889998877641 000 0 012356899999
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.++++|+.|+|++|+|++.++. |.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++
T Consensus 64 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 143 (220)
T 2v70_A 64 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT 143 (220)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC
T ss_pred CCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE
Confidence 999999976677899999999999999999998886 8889999999999999998888899999999999999999996
Q ss_pred cccccc--ccccccccccCccccccCC
Q 003039 427 TVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~~p~~l--~~~~~~l~~~~n~~l~~~~ 451 (854)
..|..+ +.++..|++++|+..|.+.
T Consensus 144 ~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 144 VAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp BCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 667666 5677889999999888653
No 269
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.60 E-value=4.5e-16 Score=169.30 Aligned_cols=176 Identities=25% Similarity=0.219 Sum_probs=137.9
Q ss_pred cccceeeeecccCCCC-CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCe-eEeCCCCC
Q 003039 263 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSW-LQCNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s-~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~-~~c~~~~~ 340 (854)
.+++|+.|+|+.|.++ .+|..+..+..|+.|+++.|.+....+..+..+..++.+...+ | ...+ +......+
T Consensus 99 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~---N---~l~~~~p~~l~~l 172 (313)
T 1ogq_A 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG---N---RISGAIPDSYGSF 172 (313)
T ss_dssp GCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS---S---CCEEECCGGGGCC
T ss_pred cCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC---C---cccCcCCHHHhhh
Confidence 4678899999999998 7777899999999999999998865556666776666653321 1 1111 11122234
Q ss_pred C-CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 341 P-SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~-~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
+ +|+.|+|++|+++|.+|..+..++ |+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|. +..+++|+.|+
T Consensus 173 ~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~ 250 (313)
T 1ogq_A 173 SKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLD 250 (313)
T ss_dssp CTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEE
T ss_pred hhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEE
Confidence 4 789999999999988998888887 99999999999887775 78899999999999999876665 88889999999
Q ss_pred cccccccccccccc--ccccccccccCccc
Q 003039 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~~~~~~l~~~~n~~ 446 (854)
|++|+|+|.+|..+ +.+++.|++++|..
T Consensus 251 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 280 (313)
T 1ogq_A 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp CCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred CcCCcccCcCChHHhcCcCCCEEECcCCcc
Confidence 99999998888877 56778888888854
No 270
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.59 E-value=2.9e-15 Score=161.05 Aligned_cols=173 Identities=21% Similarity=0.226 Sum_probs=131.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+++++.+++..+.++.+|+.+. ..++.|+++.|.+....+..+..+..++.+...+ + ....+... ..+++|
T Consensus 9 l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~---n---~l~~~~~~-~~l~~L 79 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR---A---ELTKLQVD-GTLPVL 79 (290)
T ss_dssp STTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTT---S---CCCEEECC-SCCTTC
T ss_pred cCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCC---C---ccCcccCC-CCCCcC
Confidence 3455666667777777776654 4566677777766554444555555555443211 1 12233322 457899
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999999 8999999999999999999999999876 899999999999999999766677899999999999999
Q ss_pred cccccccccc---ccccccccccCcccc
Q 003039 423 MLSGTVPSSL---LSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~g~~p~~l---~~~~~~l~~~~n~~l 447 (854)
+|+ .+|... +.+++.|++++|...
T Consensus 159 ~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 159 NLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 999 777766 466788999988654
No 271
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.59 E-value=1.5e-15 Score=173.85 Aligned_cols=180 Identities=18% Similarity=0.191 Sum_probs=146.6
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~ 341 (854)
+++|+.|+|+.|.++.+|+. +..+..|+.|+++.|.+.......+..+..+..+... -|. ....+.- ....++
T Consensus 122 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~---~~~--~l~~i~~~~~~~l~ 196 (452)
T 3zyi_A 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLG---ELK--KLEYISEGAFEGLF 196 (452)
T ss_dssp CTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECC---CCT--TCCEECTTTTTTCT
T ss_pred cccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCC---CCC--CccccChhhccCCC
Confidence 56789999999999999987 8889999999999998876555555566566555321 111 1112221 234678
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 197 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 197 NLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274 (452)
T ss_dssp TCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECC
Confidence 9999999999999 566 599999999999999999998875 8999999999999999998889999999999999999
Q ss_pred cccccccccccc---ccccccccccCccccccCC
Q 003039 421 NNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
+|+|+ .+|... +.++..|++++|+..|.+.
T Consensus 275 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 275 HNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp SSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999 666655 5667899999999999875
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.58 E-value=8.8e-15 Score=151.58 Aligned_cols=151 Identities=23% Similarity=0.190 Sum_probs=125.5
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.++++.+.+..+|+.+. ..++.|++++|.+... .|- ....+++|+.|+
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~-------------------~~~----------~~~~l~~L~~L~ 70 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKL-------------------EPG----------VFDSLINLKELY 70 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCC-------------------CTT----------TTTTCTTCCEEE
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCcc-------------------CHH----------HhhCccCCcEEE
Confidence 457788999999998765 7899999999987741 110 012456899999
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..+..|..|++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~- 148 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK- 148 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-
Confidence 999999844445678999999999999999998887 688999999999999999 89999999999999999999999
Q ss_pred cccccc---ccccccccccCccccccCC
Q 003039 427 TVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
.+|... +.++..|++.+|+..|.+.
T Consensus 149 ~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 149 SIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 566543 5677889999999888653
No 273
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.58 E-value=8.1e-16 Score=166.42 Aligned_cols=182 Identities=14% Similarity=0.072 Sum_probs=142.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHH-HHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~-~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~~ 341 (854)
+++|+.|+|+.|.++.+|+.+..+..|+.|+++.|.+..... ..+..+..++.+... -|. ...+. .....++
T Consensus 77 ~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~---~n~---l~~~~~~~~~~l~ 150 (306)
T 2z66_A 77 TTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS---HTH---TRVAFNGIFNGLS 150 (306)
T ss_dssp CSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECT---TSC---CEECSTTTTTTCT
T ss_pred ccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECC---CCc---CCccchhhcccCc
Confidence 567888899999998888888888999999998888765332 334444455544221 110 11111 1134567
Q ss_pred CeeEEEecCCCCCc-cCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 342 SITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 342 ~l~~L~L~~n~l~g-~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
+|+.|+|++|++++ .+|..+..+++|+.|+|++|++++.+|. +.++++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 230 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEEC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeEC
Confidence 99999999999997 5899999999999999999999998775 888999999999999999766778999999999999
Q ss_pred ccccccccccccc--c-cccccccccCccccccCC
Q 003039 420 QNNMLSGTVPSSL--L-SKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 420 ~~N~l~g~~p~~l--~-~~~~~l~~~~n~~l~~~~ 451 (854)
++|++++..|..+ + .++..|++++|+..|.+.
T Consensus 231 ~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 9999998888776 3 477899999999887653
No 274
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=6e-16 Score=170.61 Aligned_cols=135 Identities=15% Similarity=0.142 Sum_probs=96.9
Q ss_pred HhhccccccCceEEEEEEECCCcEEEEEEEccCCc-----c---------cHH--------HHHHHHHHHccCCCCceee
Q 003039 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-----Q---------GKR--------EFTNEVTLLSRIHHRNLVQ 586 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~-----~---------~~~--------~~~~Ev~~L~~l~HpnIv~ 586 (854)
.+..+||+|+||.||+|...+|+.||||+++.... . ... ...+|...|.++++.++..
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34678999999999999999999999999763210 0 011 1234666666665444322
Q ss_pred EeeeeeecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCC
Q 003039 587 FLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 666 (854)
Q Consensus 587 l~g~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~ 666 (854)
..-+... ..+|||||+++++|.+... ......++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 178 p~p~~~~--~~~LVME~i~G~~L~~l~~----------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQS--RHTIVMSLVDALPMRQVSS----------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEEE--TTEEEEECCSCEEGGGCCC----------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred Ceeeecc--CceEEEEecCCccHhhhcc----------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 1111111 2379999999988865432 113356789999999999998 999999999999999877
Q ss_pred c----------EEEEeeecccc
Q 003039 667 R----------AKVSDFGLSKF 678 (854)
Q Consensus 667 ~----------vkl~DFGla~~ 678 (854)
. +.|+||+.+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 3 89999997753
No 275
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.57 E-value=5.1e-15 Score=149.00 Aligned_cols=154 Identities=18% Similarity=0.171 Sum_probs=122.1
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.++++.|.+..+|..+.. .++.|++++|.+... .+- + ....+++|+.|+
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~-------------------~~~------~---~~~~l~~L~~L~ 60 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRI-------------------SSD------G---LFGRLPHLVKLE 60 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSB-------------------CCS------C---SGGGCTTCCEEE
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCcc-------------------CCc------c---ccccCCCCCEEE
Confidence 4678889999999987654 788999999887640 000 0 012456899999
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|++|+|++|+|++.+|..|..+++|+.|+|++|++++
T Consensus 61 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 999999988899999999999999999999998886 8889999999999999999889999999999999999999998
Q ss_pred ccccccccc-cccccccCccccccCC
Q 003039 427 TVPSSLLSK-NVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~~p~~l~~~-~~~l~~~~n~~l~~~~ 451 (854)
..+...+.. +....+.++...|..+
T Consensus 141 ~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 141 NCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 877544322 3333455565566554
No 276
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.55 E-value=5e-15 Score=158.50 Aligned_cols=177 Identities=15% Similarity=0.133 Sum_probs=139.4
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~~~ 342 (854)
..++.|+|+.|.++.+|+. +..+..|+.|+++.|.+....+..+..+..++.+...+ +.- ...+. -....+++
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~~----l~~~~~~~~~~l~~ 106 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD-NAQ----LRSVDPATFHGLGR 106 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS-CTT----CCCCCTTTTTTCTT
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC-CCC----ccccCHHHhcCCcC
Confidence 4678999999999999975 89999999999999998775556666666666553321 110 11111 12335678
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
|+.|+|++|++++..|..+.++++|++|+|++|++++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|++
T Consensus 107 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 186 (285)
T 1ozn_A 107 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186 (285)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCC
Confidence 99999999999977788899999999999999999988876 78899999999999999965555799999999999999
Q ss_pred ccccccccccc--ccccccccccCccc
Q 003039 422 NMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~~~l~~~~n~~ 446 (854)
|++++..|..+ +.++..|++++|..
T Consensus 187 n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 187 NRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcccccCHhHccCcccccEeeCCCCcC
Confidence 99997667766 56788888888853
No 277
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.54 E-value=5e-15 Score=157.70 Aligned_cols=180 Identities=13% Similarity=0.116 Sum_probs=123.1
Q ss_pred ccceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~ 341 (854)
++.|+.|+|+.|.++.+++ .+..+..|+.|+++.|.+....+..+..+..++.+...+ |. ...+.. ....++
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~---n~---l~~~~~~~~~~l~ 124 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE---TN---LASLENFPIGHLK 124 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT---SC---CCCSTTCCCTTCT
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC---CC---ccccCchhcccCC
Confidence 3455666666666666665 356666666666666665543333344444443332111 00 000000 123567
Q ss_pred CeeEEEecCCCCCc-cCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCcc----EEEeCCCccCCCCCccccCCCCCc
Q 003039 342 SITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR----IIHLEDNQLTGPLPSSLMNLPNLR 415 (854)
Q Consensus 342 ~l~~L~L~~n~l~g-~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~----~L~Ls~N~l~g~~P~~l~~l~~L~ 415 (854)
+|+.|+|++|++++ .+|..+.++++|+.|+|++|++++.++. +..+.+|+ .|+|++|++++ +|.......+|+
T Consensus 125 ~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~-~~~~~~~~~~L~ 203 (276)
T 2z62_A 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLK 203 (276)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCE-ECTTSSCSCCEE
T ss_pred CCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccc-cCccccCCCccc
Confidence 89999999999986 3799999999999999999999987764 55555555 89999999995 554445556899
Q ss_pred eeecccccccccccccc---ccccccccccCccccccCC
Q 003039 416 ELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 416 ~l~l~~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
.|+|++|+|+ .+|... +.++..|++++|+..|.++
T Consensus 204 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 204 ELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EEECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred EEECCCCcee-ecCHhHhcccccccEEEccCCcccccCC
Confidence 9999999999 666655 5567889999999988764
No 278
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.53 E-value=3.6e-14 Score=162.17 Aligned_cols=186 Identities=14% Similarity=0.083 Sum_probs=124.1
Q ss_pred cceeeeecccCCCCCCCccc---------chhhhceeccCCCCCccHHHHHHHHhhc---CCCCccCCCC----------
Q 003039 265 PFVLSFKFGKTYDSSRGPLL---------NAMEINKYLERNDGSIDGVAIVSVISLY---SSADWAQEGG---------- 322 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~i---------n~le~l~~L~l~~~~~~~~~~~~l~~l~---~~~~w~~~~~---------- 322 (854)
..++.|++..|.+..+++.. ..+..|+.|+++.|.+....+..+.... .+..+...+.
T Consensus 180 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 259 (455)
T 3v47_A 180 KHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHT 259 (455)
T ss_dssp CEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCC
T ss_pred ccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchh
Confidence 45566666666666665542 2346799999999999888888877662 1211111000
Q ss_pred -----CC-----CCCCCCCeeE----------e-CCCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCC
Q 003039 323 -----DP-----CLPVPWSWLQ----------C-NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI 381 (854)
Q Consensus 323 -----~p-----c~~~~~~~~~----------c-~~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~ 381 (854)
.+ +.......+. . ....+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (455)
T 3v47_A 260 NFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSID 339 (455)
T ss_dssp SSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred hhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcC
Confidence 00 0000011111 0 1234567888888888888777778888888888888888887776
Q ss_pred CC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccccccccc---ccccccccccCccccccCC
Q 003039 382 PD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 382 p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
|. +.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|... +++++.|++++|+..|.++
T Consensus 340 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 340 SRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp GGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 64 677888888888888888777888888888888888888888 455544 4567778888888777654
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.53 E-value=3.7e-15 Score=176.96 Aligned_cols=182 Identities=13% Similarity=0.017 Sum_probs=144.1
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHH-HHHHhhcCCCCccCCCCCCCCCCCCCee-EeCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~-~~l~~l~~~~~w~~~~~~pc~~~~~~~~-~c~~~~~ 340 (854)
.++.|+.|+|+.|.++.+|+.+..+..|+.|++++|.+....+ ..+..+..++.+... -|. .... .-....+
T Consensus 374 ~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~---~n~---l~~~~~~~~~~l 447 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS---YTN---TKIDFDGIFLGL 447 (606)
T ss_dssp CCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT---TSC---CEECCTTTTTTC
T ss_pred cCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECc---CCC---CCccchhhhcCC
Confidence 3567788888888888888888888888888888888765433 344455555544221 111 1111 1123456
Q ss_pred CCeeEEEecCCCCCc-cCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 341 PSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g-~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++.+|. +.++++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 448 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 527 (606)
T 3vq2_A 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 527 (606)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEE
Confidence 799999999999998 4788999999999999999999998886 88999999999999999988899999999999999
Q ss_pred cccccccccccccc--cc-ccccccccCccccccCC
Q 003039 419 VQNNMLSGTVPSSL--LS-KNVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~~-~~~~l~~~~n~~l~~~~ 451 (854)
|++|+|+ .+|..+ +. .+..+++++|+..|.+.
T Consensus 528 l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 528 CSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999 898876 33 47889999999998765
No 280
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.53 E-value=6e-15 Score=174.96 Aligned_cols=180 Identities=17% Similarity=0.144 Sum_probs=98.5
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCC---CCCCCCCeeEeC---
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDP---CLPVPWSWLQCN--- 336 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~p---c~~~~~~~~~c~--- 336 (854)
+++|+.|+|+.|.++.+||. +..+..|+.|++++|.+....+..+..+ ..+....... ..+.....+.++
T Consensus 146 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L---~~L~l~~n~l~~l~~~~~L~~L~ls~n~ 222 (597)
T 3oja_B 146 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL---FHANVSYNLLSTLAIPIAVEELDASHNS 222 (597)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTC---SEEECCSSCCSEEECCTTCSEEECCSSC
T ss_pred CCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhh---hhhhcccCccccccCCchhheeeccCCc
Confidence 55677777888877777774 7777778888887777654322222222 1110000000 000000111100
Q ss_pred ---------------------------CCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCC
Q 003039 337 ---------------------------SDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPD 389 (854)
Q Consensus 337 ---------------------------~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~ 389 (854)
...+++|+.|+|++|.|++.+|..|++|++|+.|+|++|+|++.++.+..+++
T Consensus 223 l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~ 302 (597)
T 3oja_B 223 INVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT 302 (597)
T ss_dssp CCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTT
T ss_pred ccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCC
Confidence 11234566666666666655566666666666666666666665444555666
Q ss_pred ccEEEeCCCccCCCCCccccCCCCCceeeccccccccccccccccccccccccCccccc
Q 003039 390 LRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 390 L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~l~ 448 (854)
|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|+ .+|...+..+..|++++|+..|
T Consensus 303 L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 303 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCCCCTTCCCSEEECCSSCEEH
T ss_pred CcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC-CcChhhcCCCCEEEeeCCCCCC
Confidence 666666666666 45656666666666666666666 4454445556666666666554
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.52 E-value=6.9e-15 Score=164.82 Aligned_cols=180 Identities=17% Similarity=0.144 Sum_probs=97.0
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCC---CCCCCCCeeEeC---
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDP---CLPVPWSWLQCN--- 336 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~p---c~~~~~~~~~c~--- 336 (854)
+++|+.|+|+.|.++.++|. +..+..|+.|+++.|.+....+..+.++ ..+....... ..+.....+..+
T Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L---~~L~l~~n~l~~~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 140 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL---FHANVSYNLLSTLAIPIAVEELDASHNS 216 (390)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTC---SEEECCSSCCSEEECCSSCSEEECCSSC
T ss_pred CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccccccccc---ceeecccccccccCCCCcceEEECCCCe
Confidence 56777888888888888765 7778888888888877655332222222 1110000000 000001111100
Q ss_pred ---------------------------CCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCC
Q 003039 337 ---------------------------SDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPD 389 (854)
Q Consensus 337 ---------------------------~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~ 389 (854)
...+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.++.+..+++
T Consensus 217 l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~ 296 (390)
T 3o6n_A 217 INVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT 296 (390)
T ss_dssp CCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTT
T ss_pred eeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCC
Confidence 11234555566666666555555566666666666666666555444555566
Q ss_pred ccEEEeCCCccCCCCCccccCCCCCceeeccccccccccccccccccccccccCccccc
Q 003039 390 LRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 390 L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~l~ 448 (854)
|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|+ .+|...+.++..|++++|+..|
T Consensus 297 L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 297 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCCCCTTCCCSEEECCSSCEEH
T ss_pred CCEEECCCCcce-ecCccccccCcCCEEECCCCccc-eeCchhhccCCEEEcCCCCccc
Confidence 666666666665 45555555666666666666665 4454445555666666665544
No 282
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.52 E-value=3.3e-14 Score=146.28 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=118.8
Q ss_pred ceeeeecccCCCCCCCcc--cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGPL--LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~--in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
.++.|+|+.|.++.++|. +..+..|+.|++++|++... .+- ....+++|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i-------------------~~~----------~~~~l~~L 83 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI-------------------EEG----------AFEGASGV 83 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE-------------------CHH----------HhCCCCCC
Confidence 346889999999999764 89999999999999987751 000 12345689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 84 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 84 NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp CEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 9999999999977777799999999999999999999775 899999999999999999888999999999999999999
Q ss_pred cccccccccc
Q 003039 423 MLSGTVPSSL 432 (854)
Q Consensus 423 ~l~g~~p~~l 432 (854)
++.+..+...
T Consensus 164 ~l~c~c~l~~ 173 (220)
T 2v70_A 164 PFNCNCYLAW 173 (220)
T ss_dssp CEECSGGGHH
T ss_pred CCcCCCchHH
Confidence 9997766443
No 283
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.51 E-value=8.3e-14 Score=146.19 Aligned_cols=149 Identities=19% Similarity=0.170 Sum_probs=124.5
Q ss_pred eeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEE
Q 003039 267 VLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVI 346 (854)
Q Consensus 267 l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L 346 (854)
.+.+++..+.++.+|+.+. ..++.|+++.|.+... ... ....+++|+.|
T Consensus 16 ~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~------------------~~~-----------~~~~l~~L~~L 64 (251)
T 3m19_A 16 KKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATL------------------SDA-----------TFRGLTKLTWL 64 (251)
T ss_dssp GTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCC------------------CTT-----------TTTTCTTCCEE
T ss_pred CeEEecCCCCccccCCCCC--CCCCEEEccCCCcCcc------------------CHh-----------HhcCcccCCEE
Confidence 4567889999999999876 5789999999987641 000 01245689999
Q ss_pred EecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccccc
Q 003039 347 HLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 347 ~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~ 425 (854)
+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 65 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 65 NLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC
Confidence 9999999987888899999999999999999998886 788999999999999999666667899999999999999999
Q ss_pred ccccc-cc--ccccccccccCcccc
Q 003039 426 GTVPS-SL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 426 g~~p~-~l--~~~~~~l~~~~n~~l 447 (854)
.+|. .+ +.+++.|++++|...
T Consensus 145 -~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 145 -SIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCCS
T ss_pred -ccCHHHcCcCcCCCEEECCCCcCC
Confidence 5555 34 567889999998643
No 284
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.51 E-value=2.5e-14 Score=152.12 Aligned_cols=159 Identities=20% Similarity=0.179 Sum_probs=113.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~~ 342 (854)
+++|+.|+|+.|.++.+ +.+..+..|+.|++++|.+.......+..+..++.+...+ |. ...+.. ....+++
T Consensus 62 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~---n~---l~~~~~~~~~~l~~ 134 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE---NQ---LQSLPDGVFDKLTN 134 (272)
T ss_dssp CTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT---SC---CCCCCTTTTTTCTT
T ss_pred CCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC---Cc---CCccCHHHhccCCC
Confidence 34556666666666654 3555666666666666665543333334444444332211 10 111111 1245679
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..|..+..+++|+.|+|++
T Consensus 135 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 214 (272)
T 3rfs_A 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 214 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccC
Confidence 99999999999966666789999999999999999998887 68899999999999999988777899999999999999
Q ss_pred cccccccc
Q 003039 422 NMLSGTVP 429 (854)
Q Consensus 422 N~l~g~~p 429 (854)
|++.+..|
T Consensus 215 N~~~~~~~ 222 (272)
T 3rfs_A 215 NPWDCTCP 222 (272)
T ss_dssp SCBCCCTT
T ss_pred CCccccCc
Confidence 99997766
No 285
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.50 E-value=5.1e-14 Score=168.20 Aligned_cols=182 Identities=16% Similarity=0.120 Sum_probs=129.4
Q ss_pred ceeeeecccCCCCCCCcc-cc-------hhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-
Q 003039 266 FVLSFKFGKTYDSSRGPL-LN-------AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN- 336 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~-in-------~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~- 336 (854)
.|+.|+|+.|.++...|. |. .+..|+.|+++.|.+.......+..+..+..+...+.. -...+-......
T Consensus 403 ~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~-l~~i~~~~~~~~~ 481 (636)
T 4eco_A 403 VMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNM-LTEIPKNSLKDEN 481 (636)
T ss_dssp CEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSC-CSBCCSSSSEETT
T ss_pred ccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCC-CCCcCHHHhcccc
Confidence 455555555555553332 44 44566666666666654433334445555444321111 001111111100
Q ss_pred --CCCCCCeeEEEecCCCCCccCCcccc--cCccCcEEeccCCCCCCCCCCCCCCCCccEEEe------CCCccCCCCCc
Q 003039 337 --SDPQPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHL------EDNQLTGPLPS 406 (854)
Q Consensus 337 --~~~~~~l~~L~L~~n~l~g~lp~~i~--~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L------s~N~l~g~~P~ 406 (854)
...+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.++.+.++++|+.|+| ++|++.+.+|.
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~ 560 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPE 560 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCT
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChH
Confidence 112338999999999999 8999998 999999999999999995556889999999999 56889999999
Q ss_pred cccCCCCCceeeccccccccccccccccccccccccCccccccC
Q 003039 407 SLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 407 ~l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~l~~~ 450 (854)
.++.+++|+.|+|++|+| +.+|..+.+.++.|++++|+..|..
T Consensus 561 ~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 561 GITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp TGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred HHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 999999999999999999 5999999999999999999887643
No 286
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.50 E-value=9.5e-15 Score=162.12 Aligned_cols=155 Identities=20% Similarity=0.180 Sum_probs=125.2
Q ss_pred ceeeeecccCCCCCCCcc-cc-hhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGPL-LN-AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~-in-~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
.++.|+|+.|.++.+|+. +. .+..|+.|++++|++.... +- ....+++|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~-------------------~~----------~~~~l~~L 90 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFIS-------------------SE----------AFVPVPNL 90 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEEC-------------------TT----------TTTTCTTC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccC-------------------hh----------hccCCCCC
Confidence 357789999999999987 44 8999999999999876410 00 12345789
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccc----cCCCCCceee
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSL----MNLPNLRELY 418 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l----~~l~~L~~l~ 418 (854)
+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..|. |.++++|+.|+|++|+|+ .+|..+ ..+++|+.|+
T Consensus 91 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~ 169 (361)
T 2xot_A 91 RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLD 169 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEE
T ss_pred CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEE
Confidence 9999999999976666899999999999999999998775 899999999999999999 566654 6799999999
Q ss_pred ccccccccccccccccc-----cccccccCccccccCC
Q 003039 419 VQNNMLSGTVPSSLLSK-----NVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~~p~~l~~~-----~~~l~~~~n~~l~~~~ 451 (854)
|++|+|+ .+|...+.. +..|++.+|+..|.+.
T Consensus 170 L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 170 LSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999999 677544332 2568999999998753
No 287
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.50 E-value=1.7e-13 Score=139.44 Aligned_cols=88 Identities=26% Similarity=0.309 Sum_probs=47.8
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|+|++..+..+.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 76 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 76 TSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL 155 (208)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEe
Confidence 4555555555555533333345555555555555555555554 455555555555555555433334555555555555
Q ss_pred ccccccccc
Q 003039 420 QNNMLSGTV 428 (854)
Q Consensus 420 ~~N~l~g~~ 428 (854)
++|++.+..
T Consensus 156 ~~N~~~~~~ 164 (208)
T 2o6s_A 156 HDNPWDCTC 164 (208)
T ss_dssp CSCCBCCCT
T ss_pred cCCCeecCC
Confidence 555555443
No 288
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.49 E-value=5e-14 Score=138.22 Aligned_cols=136 Identities=20% Similarity=0.168 Sum_probs=117.6
Q ss_pred ccceeeeecccCCCC--CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003039 264 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s--~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~ 341 (854)
.+.++.|+|+.|.++ .+|+.+..+..|+.|+++.|.+... . ....++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-----------~--------------------~~~~l~ 71 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-----------S--------------------NLPKLP 71 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-----------S--------------------SCCCCS
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-----------h--------------------hhccCC
Confidence 467899999999999 9999999999999999999987640 0 112456
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCC--CCCCCCCCccEEEeCCCccCCCCC---ccccCCCCCce
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 416 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~--p~~~~l~~L~~L~Ls~N~l~g~~P---~~l~~l~~L~~ 416 (854)
+|+.|+|++|++++.+|..+.++++|+.|+|++|+|++.+ +.+..+++|+.|+|++|.+++..+ ..+..+++|+.
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 8999999999999878988888999999999999999965 568999999999999999995444 48999999999
Q ss_pred eeccccccccccccc
Q 003039 417 LYVQNNMLSGTVPSS 431 (854)
Q Consensus 417 l~l~~N~l~g~~p~~ 431 (854)
|++++|.+. .+|..
T Consensus 152 L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 152 LDGYDREDQ-EAPDS 165 (168)
T ss_dssp ETTEETTSC-BCCSS
T ss_pred ecCCCCChh-hcccc
Confidence 999999998 77754
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.49 E-value=3.7e-14 Score=162.26 Aligned_cols=177 Identities=19% Similarity=0.163 Sum_probs=139.5
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~ 340 (854)
.++.|+.|+|+.|.++.++|. +..+..|+.|+++.|.+.......+..+..++.+...+ | ....+.. ....+
T Consensus 97 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~---N---~l~~~~~~~~~~l 170 (452)
T 3zyi_A 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRN---N---PIESIPSYAFNRV 170 (452)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCS---C---CCCEECTTTTTTC
T ss_pred CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCC---C---CcceeCHhHHhcC
Confidence 366889999999999999875 89999999999999998765555555565666553321 1 1222222 24567
Q ss_pred CCeeEEEecCCCCCccCCc-ccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~-~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|+..+.+|. .|.+|++|+.|+|++|+|++. |.+..+++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 249 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEEC
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEe
Confidence 8999999998554446665 588999999999999999875 67899999999999999999888999999999999999
Q ss_pred ccccccccccccc--ccccccccccCccc
Q 003039 420 QNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 420 ~~N~l~g~~p~~l--~~~~~~l~~~~n~~ 446 (854)
++|++++..|..+ +.++..|++++|..
T Consensus 250 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 278 (452)
T 3zyi_A 250 MNSQVSLIERNAFDGLASLVELNLAHNNL 278 (452)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCcCceECHHHhcCCCCCCEEECCCCcC
Confidence 9999996666655 56788899998854
No 290
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.49 E-value=3.5e-14 Score=143.36 Aligned_cols=148 Identities=16% Similarity=0.130 Sum_probs=123.4
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
.+..++.|+++.|.++.+| .+..+..|+.|++++|.+.. ... ...+++
T Consensus 42 ~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~-----------~~~--------------------l~~l~~ 89 (197)
T 4ezg_A 42 QMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN-----------YNP--------------------ISGLSN 89 (197)
T ss_dssp HHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC-----------CGG--------------------GTTCTT
T ss_pred hcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc-----------chh--------------------hhcCCC
Confidence 4567889999999999998 68999999999999885542 000 123568
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCc-cCCCCCccccCCCCCceeecc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQ-LTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l~~L~~l~l~ 420 (854)
|+.|+|++|++++..|..|..|++|+.|+|++|++++..| .+..+++|++|+|++|+ ++ .+| .+..+++|+.|+++
T Consensus 90 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 90 LERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQ 167 (197)
T ss_dssp CCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECT
T ss_pred CCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECC
Confidence 9999999999998889999999999999999999998655 48899999999999998 55 677 69999999999999
Q ss_pred ccccccccc-cccccccccccccCcc
Q 003039 421 NNMLSGTVP-SSLLSKNVVLNYAGNI 445 (854)
Q Consensus 421 ~N~l~g~~p-~~l~~~~~~l~~~~n~ 445 (854)
+|++++ ++ -.-+++++.|++++|+
T Consensus 168 ~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 168 FDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp TBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred CCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 999995 54 3337788999999886
No 291
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.49 E-value=4.1e-14 Score=161.33 Aligned_cols=178 Identities=19% Similarity=0.183 Sum_probs=138.8
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~ 340 (854)
.+++|+.|+|+.|.++.+++. +..+..|+.|+++.|.+.......+..+..++.+...+ + ....+.. ....+
T Consensus 86 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N-----~i~~~~~~~~~~l 159 (440)
T 3zyj_A 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN-N-----PIESIPSYAFNRI 159 (440)
T ss_dssp SCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCS-C-----CCCEECTTTTTTC
T ss_pred CCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCC-C-----cccccCHHHhhhC
Confidence 356789999999999999975 89999999999999998765544555555565553321 1 1222221 23467
Q ss_pred CCeeEEEecCCCCCccCCc-ccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~-~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|+..+.+|. .|.+|++|+.|+|++|+|+. +|.+..+++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 238 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCccChhhhccCccCCEEEC
Confidence 8999999998555446665 68899999999999999985 567899999999999999999888899999999999999
Q ss_pred ccccccccccccc--ccccccccccCcccc
Q 003039 420 QNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 420 ~~N~l~g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
++|+|++..|..+ +.+++.|++++|...
T Consensus 239 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 239 IQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp TTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 9999995555554 567888999988543
No 292
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.1e-13 Score=169.42 Aligned_cols=179 Identities=16% Similarity=0.140 Sum_probs=134.9
Q ss_pred ceeeeecccCCCCCCCcccc------hhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCC---eeEeC
Q 003039 266 FVLSFKFGKTYDSSRGPLLN------AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWS---WLQCN 336 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~in------~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~---~~~c~ 336 (854)
.|+.|+|+.|.++..+|.+. .+..|+.|+++.|.+.......+..+..+..+...+.. -...+-. +....
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~-L~~ip~~~~~~~~~~ 723 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNL-MTSIPENSLKPKDGN 723 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCC-CSCCCTTSSSCTTSC
T ss_pred CCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCc-CCccChHHhcccccc
Confidence 47778888888776655443 33467888888888775444444455556555332111 1000000 00000
Q ss_pred CCCCCCeeEEEecCCCCCccCCcccc--cCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCC------CccCCCCCccc
Q 003039 337 SDPQPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLED------NQLTGPLPSSL 408 (854)
Q Consensus 337 ~~~~~~l~~L~L~~n~l~g~lp~~i~--~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~------N~l~g~~P~~l 408 (854)
..++++|+.|+|++|+|+ .+|..+. .|++|+.|+|++|+|++.++.+.++++|+.|+|++ |++.+.+|..|
T Consensus 724 l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l 802 (876)
T 4ecn_A 724 YKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGI 802 (876)
T ss_dssp CTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTG
T ss_pred ccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHH
Confidence 112348999999999999 8999998 99999999999999999666789999999999976 88999999999
Q ss_pred cCCCCCceeeccccccccccccccccccccccccCcccc
Q 003039 409 MNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 409 ~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~l 447 (854)
..|++|+.|+|++|+| +.+|..+.+.+..|++++|+..
T Consensus 803 ~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 803 TTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp GGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTC
T ss_pred hcCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCC
Confidence 9999999999999999 6999999999999999999754
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.48 E-value=4.6e-14 Score=154.32 Aligned_cols=172 Identities=17% Similarity=0.211 Sum_probs=102.2
Q ss_pred ceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccH--HHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 266 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~--~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
.|+.|+++.|.++.+++. +..+..|+.|+++.|.+.. .....+..+..++.+... -|. ...+. ..-.++
T Consensus 122 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~---~n~---l~~l~--~~~~~~ 193 (330)
T 1xku_A 122 TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA---DTN---ITTIP--QGLPPS 193 (330)
T ss_dssp TCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC---SSC---CCSCC--SSCCTT
T ss_pred cccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC---CCc---cccCC--cccccc
Confidence 445555555555555543 4555555555555555432 122223333333332111 010 01111 011256
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
|+.|+|++|++++..|..|.++++|+.|+|++|++++.++ .+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 194 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~ 272 (330)
T 1xku_A 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHN 272 (330)
T ss_dssp CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCC
Confidence 7788888888877667777788888888888888877766 3677788888888888887 7777777888888888888
Q ss_pred cccccccccccc---------cccccccccCcccc
Q 003039 422 NMLSGTVPSSLL---------SKNVVLNYAGNINL 447 (854)
Q Consensus 422 N~l~g~~p~~l~---------~~~~~l~~~~n~~l 447 (854)
|+|+ .+|...+ ..+..+++.+|+..
T Consensus 273 N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 273 NNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp SCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CcCC-ccChhhcCCcccccccccccceEeecCccc
Confidence 8887 4544332 23355667777654
No 294
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.48 E-value=2.2e-14 Score=165.22 Aligned_cols=181 Identities=20% Similarity=0.102 Sum_probs=133.6
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
+++|+.|+|..|.++.+|+. +..+..|+.|++..|.+.......+..+..++.+...+ |.. ...+.-......+
T Consensus 151 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~---~~~--~~~~~~~~~~~~~ 225 (477)
T 2id5_A 151 LNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH---WPY--LDTMTPNCLYGLN 225 (477)
T ss_dssp CTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEEC---CTT--CCEECTTTTTTCC
T ss_pred CCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCC---Ccc--ccccCcccccCcc
Confidence 45667777777777777765 77777777777777766553333333333333332110 100 0111111122348
Q ss_pred eeEEEecCCCCCccCC-cccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 343 ITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp-~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
|+.|+|++|+|+ .+| ..+.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 226 L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 226 LTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp CSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred ccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 999999999999 566 5789999999999999999998876 8899999999999999999889999999999999999
Q ss_pred cccccccccccc---ccccccccccCccccccCC
Q 003039 421 NNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
+|+|+ .+|... +.++..|++++|+..|.+.
T Consensus 305 ~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 305 GNQLT-TLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SSCCS-CCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CCcCc-eeCHhHcCCCcccCEEEccCCCccCccc
Confidence 99999 566554 4677899999999988753
No 295
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.48 E-value=9.3e-14 Score=139.72 Aligned_cols=111 Identities=26% Similarity=0.334 Sum_probs=99.3
Q ss_pred CCeeEEEecCCCCCccCCc-ccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 341 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~-~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
.+|+.|+|++|+|++..|. .|.+|++|+.|+|++|+|++.+|. |.++++|++|+|++|+|++..|..|..+++|+.|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 3899999999999955554 489999999999999999999775 89999999999999999988888899999999999
Q ss_pred cccccccccccccc--ccccccccccCccccccCC
Q 003039 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~~~~ 451 (854)
|++|+|++.+|..+ +.++..|++++|+..|.+.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999998778776 6778999999999887653
No 296
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.48 E-value=1.9e-13 Score=138.99 Aligned_cols=150 Identities=21% Similarity=0.198 Sum_probs=106.3
Q ss_pred eeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEe
Q 003039 269 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 348 (854)
Q Consensus 269 ~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~L 348 (854)
.+++..+.++.+|..+. +.++.|+++.|++... ...+ ...+++|+.|+|
T Consensus 11 ~v~c~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~----------~~~~-------------------~~~l~~L~~L~l 59 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGIP--AQTTYLDLETNSLKSL----------PNGV-------------------FDELTSLTQLYL 59 (208)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCC----------CTTT-------------------TTTCTTCSEEEC
T ss_pred EEEecCCCccCCCCCCC--CCCcEEEcCCCccCcC----------Chhh-------------------hcccccCcEEEC
Confidence 34556677777776553 4677778877766530 0000 123457888888
Q ss_pred cCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccccccc
Q 003039 349 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 427 (854)
Q Consensus 349 ~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~ 427 (854)
++|+|++..+..|.++++|++|+|++|+|++.++. +.++++|++|+|++|+|++..+..+..+++|+.|+|++|+|+ .
T Consensus 60 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~ 138 (208)
T 2o6s_A 60 GGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-S 138 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-C
T ss_pred CCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-e
Confidence 88888854445567888888888888888877776 677888888888888888655566788888888888888888 4
Q ss_pred ccccc---ccccccccccCccccccC
Q 003039 428 VPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 428 ~p~~l---~~~~~~l~~~~n~~l~~~ 450 (854)
+|... +.+++.|++++|+..|..
T Consensus 139 ~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 139 VPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred eCHHHhccCCCccEEEecCCCeecCC
Confidence 55443 556778888888776654
No 297
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.48 E-value=1.8e-13 Score=141.69 Aligned_cols=136 Identities=18% Similarity=0.133 Sum_probs=116.2
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+.++.|+|+.|.++.++|. +..+..|+.|++++|++.. ..+. ....+++|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------i~~~----------~~~~l~~L 90 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-------------------LPVG----------VFDSLTQL 90 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC-------------------cChh----------hcccCCCc
Confidence 5778999999999999765 8999999999999998754 1110 01345789
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|++..+..|..|++|+.|+|++|+|+..+..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 99999999999655666889999999999999999777789999999999999999996666789999999999999999
Q ss_pred cccccc
Q 003039 424 LSGTVP 429 (854)
Q Consensus 424 l~g~~p 429 (854)
+.+..+
T Consensus 171 ~~c~c~ 176 (229)
T 3e6j_A 171 WDCECR 176 (229)
T ss_dssp BCTTBG
T ss_pred ccCCcc
Confidence 996654
No 298
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.48 E-value=6.5e-14 Score=148.72 Aligned_cols=171 Identities=19% Similarity=0.166 Sum_probs=125.9
Q ss_pred eeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCCeeE
Q 003039 267 VLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPSITV 345 (854)
Q Consensus 267 l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~-~~~~~~l~~ 345 (854)
.+.++++.+.++.+|+.+. ..++.|+++.|.+.......+..+..++.+...+ |. ...+.-. ...+++|+.
T Consensus 18 ~~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~---n~---l~~i~~~~~~~l~~L~~ 89 (270)
T 2o6q_A 18 KNSVDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLND---NK---LQTLPAGIFKELKNLET 89 (270)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCS---SC---CSCCCTTTTSSCTTCCE
T ss_pred CCEEEccCCCCCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCC---Cc---cCeeChhhhcCCCCCCE
Confidence 4578889999999998775 5789999999988765444555555555553311 10 1122211 235678999
Q ss_pred EEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccc
Q 003039 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 346 L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l 424 (854)
|+|++|+|++..+..+.++++|+.|+|++|++++.++. |.++++|++|+|++|+|++..+..|..+++|+.|+|++|++
T Consensus 90 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 90 LWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 99999999865555678889999999999999888876 68899999999999999865555688889999999999999
Q ss_pred ccccccc-c--ccccccccccCccc
Q 003039 425 SGTVPSS-L--LSKNVVLNYAGNIN 446 (854)
Q Consensus 425 ~g~~p~~-l--~~~~~~l~~~~n~~ 446 (854)
+ .+|.. + +.++..|++++|..
T Consensus 170 ~-~~~~~~~~~l~~L~~L~L~~N~l 193 (270)
T 2o6q_A 170 K-RVPEGAFDKLTELKTLKLDNNQL 193 (270)
T ss_dssp S-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred c-EeChhHhccCCCcCEEECCCCcC
Confidence 8 45544 3 46678888888743
No 299
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.48 E-value=1.2e-13 Score=142.21 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=114.2
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+.++.|+|..|.++.+|+ .+..+..|+.|+++.|++... .|- ....+++|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~-------------------~~~----------~~~~l~~L 82 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL-------------------APD----------AFQGLRSL 82 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCSSC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc-------------------CHH----------HhhCCcCC
Confidence 467899999999999998 599999999999999988641 000 12345689
Q ss_pred eEEEecCCCCCccCCc-ccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 344 TVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~-~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
+.|+|++|+|+ .+|+ .|..|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 83 ~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 161 (220)
T 2v9t_B 83 NSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 161 (220)
T ss_dssp CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCC
Confidence 99999999999 5555 468899999999999999999875 88999999999999999977777899999999999999
Q ss_pred cccccc
Q 003039 422 NMLSGT 427 (854)
Q Consensus 422 N~l~g~ 427 (854)
|++...
T Consensus 162 N~~~c~ 167 (220)
T 2v9t_B 162 NPFICD 167 (220)
T ss_dssp SCEECS
T ss_pred CCcCCC
Confidence 999743
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.47 E-value=2.5e-14 Score=154.63 Aligned_cols=175 Identities=17% Similarity=0.091 Sum_probs=109.2
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHH--HHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVA--IVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~--~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~ 341 (854)
+.++.|+|+.|.++.+|+. +..+..|+.|++++|.+.... +..+..+..++.+... -|. ...+......++
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls---~n~---i~~l~~~~~~l~ 101 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS---FNG---VITMSSNFLGLE 101 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC---SCS---EEEEEEEEETCT
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC---CCc---cccChhhcCCCC
Confidence 4678888999999999886 688899999999988876321 2344445555554321 110 112222223455
Q ss_pred CeeEEEecCCCCCccCC-cccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCC-CCCccccCCCCCceee
Q 003039 342 SITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELY 418 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp-~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~ 418 (854)
+|+.|+|++|++++..+ ..+.++++|+.|+|++|++.+.++. +.++++|++|+|++|++++ .+|..+..+++|+.|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 67777777777664333 3566667777777777776666554 5666677777777776664 4566666666777777
Q ss_pred cccccccccccccc--ccccccccccCcc
Q 003039 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~~~~~~l~~~~n~ 445 (854)
|++|++++..|..+ +.+++.|++++|.
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 77777664444444 3455666666664
No 301
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.47 E-value=5e-14 Score=152.72 Aligned_cols=170 Identities=18% Similarity=0.261 Sum_probs=129.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+|+.|.++.+|+ +..+..|+.|+++.|.+... ..+..+..++.+... -|. ...+.. ...+++|
T Consensus 62 l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~---~n~---l~~~~~-l~~l~~L 131 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLT---STQ---ITDVTP-LAGLSNL 131 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECT---TSC---CCCCGG-GTTCTTC
T ss_pred cCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECC---CCC---CCCchh-hcCCCCC
Confidence 5678899999999999999 89999999999999987653 345555555555331 121 112211 3456789
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|++++ +|. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|+|++|+
T Consensus 132 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 132 QVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEccCCc
Confidence 999999999984 554 8899999999999999988666 8889999999999999984 444 8889999999999999
Q ss_pred cccccccccccccccccccCccccc
Q 003039 424 LSGTVPSSLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 424 l~g~~p~~l~~~~~~l~~~~n~~l~ 448 (854)
+++..|-.-+.++..|++++|+..+
T Consensus 207 l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred cCccccccCCCCCCEEEccCCeeec
Confidence 9955543336778888888887543
No 302
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.47 E-value=2.5e-14 Score=169.59 Aligned_cols=174 Identities=18% Similarity=0.139 Sum_probs=88.4
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~ 340 (854)
.++.|+.|+|+.|.++.+||. +..+..|+.|+++.|.+.......+..+..+..+...+ | ...++.. ....+
T Consensus 97 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~---N---~l~~~~~~~~~~l 170 (597)
T 3oja_B 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN---N---NLERIEDDTFQAT 170 (597)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS---S---CCCBCCTTTTTTC
T ss_pred CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC---C---cCCCCChhhhhcC
Confidence 356778888888888888876 58888888888888877653333334444444432211 1 0111111 12334
Q ss_pred CCeeEEEecCCCCCccCCcccccC-------------------------------------ccCcEEeccCCCCCCCCCC
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKL-------------------------------------SSLVELWLDGNSLTGPIPD 383 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l-------------------------------------~~L~~L~L~~N~l~~~~p~ 383 (854)
++|+.|+|++|+|++.-+..+.+| ++|+.|+|++|++++ ++.
T Consensus 171 ~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~-~~~ 249 (597)
T 3oja_B 171 TSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD-TAW 249 (597)
T ss_dssp TTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC-CGG
T ss_pred CcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC-Chh
Confidence 556666666666653211111111 112223333333332 123
Q ss_pred CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccccccccc--ccccccccccCc
Q 003039 384 FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGN 444 (854)
Q Consensus 384 ~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n 444 (854)
+..+++|+.|+|++|.|++.+|..|+.+++|+.|+|++|+|+ .+|..+ ++++..|++++|
T Consensus 250 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~Ls~N 311 (597)
T 3oja_B 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHN 311 (597)
T ss_dssp GGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCC-EEECSSSCCTTCCEEECCSS
T ss_pred hccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCC-CCCcccccCCCCcEEECCCC
Confidence 444555555555555555555555555555555555555555 344433 344555555555
No 303
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.47 E-value=6.3e-14 Score=153.27 Aligned_cols=176 Identities=24% Similarity=0.216 Sum_probs=141.8
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
.+++|+.|+|+.|.++.+|+.+. ..|+.|++++|.+.......+..+..+..+... ..... ...........+++
T Consensus 98 ~l~~L~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~-~n~l~--~~~~~~~~~~~l~~ 172 (330)
T 1xku_A 98 PLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG-TNPLK--SSGIENGAFQGMKK 172 (330)
T ss_dssp TCTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC-SSCCC--GGGBCTTGGGGCTT
T ss_pred CCCCCCEEECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECC-CCcCC--ccCcChhhccCCCC
Confidence 35688999999999999998875 789999999999887777778777777766432 11110 00001112234679
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
|+.|+|++|+++ .+|..+. ++|+.|+|++|++++..|. +.++++|+.|+|++|++++..|..+..+++|+.|+|++
T Consensus 173 L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 249 (330)
T 1xku_A 173 LSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 249 (330)
T ss_dssp CCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred cCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCC
Confidence 999999999999 6887775 8999999999999998764 89999999999999999987777999999999999999
Q ss_pred ccccccccccc--ccccccccccCcccc
Q 003039 422 NMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
|+|+ .+|..+ +.+++.|++++|...
T Consensus 250 N~l~-~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 250 NKLV-KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp SCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred CcCc-cCChhhccCCCcCEEECCCCcCC
Confidence 9999 899887 567888999988654
No 304
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.46 E-value=1.6e-13 Score=145.93 Aligned_cols=152 Identities=16% Similarity=0.134 Sum_probs=118.5
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
..++.|+|+.|.++.+|+ .+..+..|+.|++++|.+...... ....+++|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----------------------------~~~~l~~L 78 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG-----------------------------AYQSLSHL 78 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTT-----------------------------TTTTCTTC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHH-----------------------------HccCCcCC
Confidence 357899999999999998 599999999999999987641100 01235688
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCC-CCCccccCCCCCceeeccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~l~~ 421 (854)
+.|+|++|++++..|..|.++++|+.|+|++|++++..+ .+.++++|++|+|++|++++ .+|..++.+++|+.|+|++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred CEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCC
Confidence 999999999987777788889999999999999988777 48888999999999999886 3688888899999999999
Q ss_pred ccccccccccc--ccccc----cccccCcc
Q 003039 422 NMLSGTVPSSL--LSKNV----VLNYAGNI 445 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~~----~l~~~~n~ 445 (854)
|++++..+..+ +..+. .|++++|.
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 99884444443 23333 56666664
No 305
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.46 E-value=4.5e-14 Score=158.19 Aligned_cols=39 Identities=8% Similarity=0.033 Sum_probs=27.6
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccH
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG 302 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~ 302 (854)
++.|+.|+|+.|.++.+||. +..+..|+.|+++.|.+..
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 131 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS 131 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc
Confidence 45667777777777777665 6777777777777776654
No 306
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.46 E-value=1.5e-13 Score=138.36 Aligned_cols=109 Identities=25% Similarity=0.292 Sum_probs=99.5
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 47999999999999 8999999999999999999999998886 899999999999999999877788999999999999
Q ss_pred ccccccccccccc---ccccccccccCccccccCC
Q 003039 420 QNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 420 ~~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~~ 451 (854)
++|+|+ .+|... +.++..|++.+|+..|.+.
T Consensus 110 ~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 110 HGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCC-eeChhhhhcCccccEEEeCCCCeecCCc
Confidence 999999 677654 5677899999999998754
No 307
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=4.7e-14 Score=172.52 Aligned_cols=141 Identities=20% Similarity=0.244 Sum_probs=120.2
Q ss_pred ccHHHHHHHHhhcCCCCccCCC----CCC--CCCCCC------------CeeEeCCCCCCCeeEEEecCCCCCccCCccc
Q 003039 300 IDGVAIVSVISLYSSADWAQEG----GDP--CLPVPW------------SWLQCNSDPQPSITVIHLSSKNLTGNIPSDL 361 (854)
Q Consensus 300 ~~~~~~~~l~~l~~~~~w~~~~----~~p--c~~~~~------------~~~~c~~~~~~~l~~L~L~~n~l~g~lp~~i 361 (854)
.|..++.++++...-.+|.... .+| | .| .||.|+. ..+++.|+|++|+|+|.+|++|
T Consensus 269 ~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C---~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~G~ip~~l 343 (876)
T 4ecn_A 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSL---NWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAKGRVPDAI 343 (876)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCC---SCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCEEEECGGG
T ss_pred HHHHHHHHHHHHcCCCCCCcCCCcccccCCcc---ccccccccccccCcCceEecC--CCCEEEEECccCCCCCcCchHH
Confidence 3667888999887766897644 467 7 48 9999975 2589999999999999999999
Q ss_pred ccCccCcEEec-cCCCCCCC------------------------------------------------------------
Q 003039 362 TKLSSLVELWL-DGNSLTGP------------------------------------------------------------ 380 (854)
Q Consensus 362 ~~l~~L~~L~L-~~N~l~~~------------------------------------------------------------ 380 (854)
++|++|+.|+| ++|.++|.
T Consensus 344 ~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l 423 (876)
T 4ecn_A 344 GQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRI 423 (876)
T ss_dssp GGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCC
T ss_pred hccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccccc
Confidence 99999999999 77755433
Q ss_pred ----------------CC-CCCCCCCccEEEeCCCccCC-----------------CCCcccc--CCCCCceeecccccc
Q 003039 381 ----------------IP-DFSGCPDLRIIHLEDNQLTG-----------------PLPSSLM--NLPNLRELYVQNNML 424 (854)
Q Consensus 381 ----------------~p-~~~~l~~L~~L~Ls~N~l~g-----------------~~P~~l~--~l~~L~~l~l~~N~l 424 (854)
+| .+++|++|+.|+|++|+|+| .+|..++ +|++|+.|+|++|++
T Consensus 424 ~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l 503 (876)
T 4ecn_A 424 SLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503 (876)
T ss_dssp CCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTT
T ss_pred chhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCC
Confidence 44 48889999999999999998 4999988 999999999999999
Q ss_pred cccccccc--ccccccccccCcc
Q 003039 425 SGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 425 ~g~~p~~l--~~~~~~l~~~~n~ 445 (854)
.|.+|..+ +++++.|++++|.
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCT
T ss_pred CccChHHHhCCCCCCEEECcCCC
Confidence 99999877 6788999999886
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.46 E-value=5.3e-14 Score=155.43 Aligned_cols=181 Identities=14% Similarity=0.098 Sum_probs=126.1
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHH-HHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 340 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~-~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~ 340 (854)
+++|+.|+|+.|.++.+|+. +..+..|+.|++++|.+..... ..+..+..++.+...+.+ ....+. .....+
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----~~~~~~~~~~~~l 173 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----TFTKIQRKDFAGL 173 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----SCCEECTTTTTTC
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----cccccCHHHccCC
Confidence 45667777777777777776 6777777777777776654221 123333333333211100 011111 123456
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCC----------------
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP---------------- 403 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~---------------- 403 (854)
++|+.|+|++|++++..|..+.++++|+.|+|++|+++..++. +..+++|+.|+|++|++++.
T Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~ 253 (353)
T 2z80_A 174 TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKK 253 (353)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCE
T ss_pred CCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhc
Confidence 7888888988888887888888888888888888888765554 34588899999999998863
Q ss_pred ---------------CCccccCCCCCceeecccccccccccccc---ccccccccccCccccccC
Q 003039 404 ---------------LPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 404 ---------------~P~~l~~l~~L~~l~l~~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~ 450 (854)
+|..+..+++|+.|+|++|+|+ .+|..+ +++++.|++++|+..|.+
T Consensus 254 l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 254 FTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp EEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 3456778899999999999999 888876 456788999999887754
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.46 E-value=1.7e-14 Score=156.67 Aligned_cols=174 Identities=18% Similarity=0.118 Sum_probs=85.3
Q ss_pred ccceeeeecccCCCC-CCCccc--chhhhceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCeeEe
Q 003039 264 LPFVLSFKFGKTYDS-SRGPLL--NAMEINKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWLQC 335 (854)
Q Consensus 264 l~~l~~l~l~~n~~s-~lpP~i--n~le~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~w~~~~~~pc~~~~~~~~~c 335 (854)
++.|+.|+|+.|.++ .+|..+ ..+..|+.|++++|++... +..+..+ ..++.+...+ | ....+.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~---N---~l~~~~~ 166 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQ---A---HSLNFSC 166 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEES---C---SCCCCCT
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeC---C---CCccchH
Confidence 445556666666655 344443 5556666666666555443 3333333 2333221110 0 0111111
Q ss_pred -CCCCCCCeeEEEecCCCCCcc--CCccc--ccCccCcEEeccCCCCCCCC--C-C-CCCCCCccEEEeCCCccCCCCC-
Q 003039 336 -NSDPQPSITVIHLSSKNLTGN--IPSDL--TKLSSLVELWLDGNSLTGPI--P-D-FSGCPDLRIIHLEDNQLTGPLP- 405 (854)
Q Consensus 336 -~~~~~~~l~~L~L~~n~l~g~--lp~~i--~~l~~L~~L~L~~N~l~~~~--p-~-~~~l~~L~~L~Ls~N~l~g~~P- 405 (854)
....+++|+.|+|++|++.|. +|..+ .++++|+.|+|++|+|++.. + . +.++++|+.|+|++|+|++.+|
T Consensus 167 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 246 (312)
T 1wwl_A 167 EQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA 246 (312)
T ss_dssp TTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC
T ss_pred HHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch
Confidence 122344566666666665544 23333 55566666666666655321 1 1 2345566666666666665443
Q ss_pred ccccCCCCCceeeccccccccccccccccccccccccCcc
Q 003039 406 SSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 406 ~~l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~ 445 (854)
..+..+++|+.|+|++|+|+ .+|..+..+++.|++++|.
T Consensus 247 ~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 247 PSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNR 285 (312)
T ss_dssp SCCCCCTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSC
T ss_pred hhhhhcCCCCEEECCCCccC-hhhhhccCCceEEECCCCC
Confidence 33444556666666666665 5555555555555555553
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.45 E-value=1.1e-14 Score=158.16 Aligned_cols=198 Identities=17% Similarity=0.082 Sum_probs=128.0
Q ss_pred CCceEEEEEECCcccccccccccccccCcceEEeccccccccccceeeeecccCCCCCCCcccchh-----hhceeccCC
Q 003039 222 DESRKFRLVLPGQPDVSKAIVNIQENAQGKYRVYEPGYTNLSLPFVLSFKFGKTYDSSRGPLLNAM-----EINKYLERN 296 (854)
Q Consensus 222 ~~~R~F~v~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~l~~n~~s~lpP~in~l-----e~l~~L~l~ 296 (854)
.+.|..|+.-|.....-+.. ++ ...+++|+.|+|+.|.++.+|+.+..+ ..|+.|+++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~------------~~-----~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~ 157 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPP------------LL-----EATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIA 157 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCC------------SS-----SCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEE
T ss_pred CCccEEEccCCcccchhHHH------------HH-----HhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEee
Confidence 46788888888754211000 00 012344555555555555555445555 555555555
Q ss_pred CCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCe---eE--eCCCCCCCeeEEEecCCCCCc--cCCc-ccccCccCc
Q 003039 297 DGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSW---LQ--CNSDPQPSITVIHLSSKNLTG--NIPS-DLTKLSSLV 368 (854)
Q Consensus 297 ~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~---~~--c~~~~~~~l~~L~L~~n~l~g--~lp~-~i~~l~~L~ 368 (854)
.|++....+..+..+..++.+...+.. ..+ +. -....+++|+.|+|++|+|++ .++. .+.++++|+
T Consensus 158 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~------l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 231 (312)
T 1wwl_A 158 QAHSLNFSCEQVRVFPALSTLDLSDNP------ELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQ 231 (312)
T ss_dssp SCSCCCCCTTTCCCCSSCCEEECCSCT------TCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCS
T ss_pred CCCCccchHHHhccCCCCCEEECCCCC------cCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCC
Confidence 555544333344444444433221100 000 00 001356799999999999993 3333 345789999
Q ss_pred EEeccCCCCCCCCC--CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccccccccc--ccccccccccCc
Q 003039 369 ELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGN 444 (854)
Q Consensus 369 ~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n 444 (854)
.|+|++|+|++.+| .+..+++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. + +.+++.|++++|
T Consensus 232 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N 306 (312)
T 1wwl_A 232 GLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGN 306 (312)
T ss_dssp EEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTC
T ss_pred EEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCC
Confidence 99999999999874 4677999999999999999 8998887 8999999999999954 66 4 667788999999
Q ss_pred ccc
Q 003039 445 INL 447 (854)
Q Consensus 445 ~~l 447 (854)
+..
T Consensus 307 ~l~ 309 (312)
T 1wwl_A 307 PFL 309 (312)
T ss_dssp TTT
T ss_pred CCC
Confidence 753
No 311
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.45 E-value=4.3e-14 Score=167.70 Aligned_cols=112 Identities=22% Similarity=0.233 Sum_probs=86.7
Q ss_pred CCCCeeEEEecCCCCCcc---CCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCC
Q 003039 339 PQPSITVIHLSSKNLTGN---IPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL 414 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g~---lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L 414 (854)
.+++|+.|+|++|++++. .+..+..+++|+.|+|++|++++.+|. +.++++|+.|+|++|+|++..|..+..+++|
T Consensus 447 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 447 GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp TCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred CCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 456788888888888762 335677888888888888888887664 7778888888888888888888888888888
Q ss_pred ceeecccccccccccccc--ccccccccccCccccccCC
Q 003039 415 RELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 415 ~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~~~~ 451 (854)
.|+|++|++++..|..+ +.++..+++++|+..|.+.
T Consensus 527 -~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 527 -YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp -EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred -EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 88888888886555544 5677888888998888653
No 312
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.45 E-value=1.6e-14 Score=169.55 Aligned_cols=181 Identities=20% Similarity=0.165 Sum_probs=122.6
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCC-------------ccHHHHHHHHhhcCCCCccCCCCCCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGS-------------IDGVAIVSVISLYSSADWAQEGGDPCLPVP 329 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~-------------~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~ 329 (854)
..++++.|+|+.|.++.||+.|..+..|+.|++++|. .....+..+..+..+..+..-........+
T Consensus 347 ~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~ 426 (567)
T 1dce_A 347 TDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLR 426 (567)
T ss_dssp TTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred cCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhh
Confidence 3567788999999999999999999999999997764 122222333333222222000000000000
Q ss_pred CCeeE---eCCCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCc
Q 003039 330 WSWLQ---CNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPS 406 (854)
Q Consensus 330 ~~~~~---c~~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~ 406 (854)
--.+. ...-....|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+..++.+++|++|+.|+|++|+|++ +|
T Consensus 427 ~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp- 502 (567)
T 1dce_A 427 SKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD- 502 (567)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-
T ss_pred hhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-
Confidence 00000 000001257888999998884 776 888889999999999888665568888899999999999885 77
Q ss_pred cccCCCCCceeecccccccccc-cccc--ccccccccccCcccc
Q 003039 407 SLMNLPNLRELYVQNNMLSGTV-PSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 407 ~l~~l~~L~~l~l~~N~l~g~~-p~~l--~~~~~~l~~~~n~~l 447 (854)
.|+.|++|+.|+|++|+|++.. |..+ ++++..|++++|+..
T Consensus 503 ~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 503 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 7888888999999999988665 7776 677888888888643
No 313
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.44 E-value=1.1e-13 Score=161.97 Aligned_cols=177 Identities=12% Similarity=0.012 Sum_probs=121.6
Q ss_pred cceeeeecccCCCCCCCccc-chhhhceeccCCCCCccHHHHHH---HHhhcCCCCccCCCCCCCCCCCCCeeE---eCC
Q 003039 265 PFVLSFKFGKTYDSSRGPLL-NAMEINKYLERNDGSIDGVAIVS---VISLYSSADWAQEGGDPCLPVPWSWLQ---CNS 337 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~i-n~le~l~~L~l~~~~~~~~~~~~---l~~l~~~~~w~~~~~~pc~~~~~~~~~---c~~ 337 (854)
..++.|++..|.+..+|+.+ ..+..|+.|+++.|.+....+.. +..+..++.+... -|. ...+. -..
T Consensus 310 ~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls---~N~---l~~~~~~~~~~ 383 (549)
T 2z81_A 310 EKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS---QNH---LRSMQKTGEIL 383 (549)
T ss_dssp TTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECT---TSC---CCCHHHHHHHG
T ss_pred ccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEcc---CCc---ccccccchhhh
Confidence 45778888888888888776 56888888888888887655433 3333444444221 111 11110 012
Q ss_pred CCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCC------------------CCCCCccEEEeCCCc
Q 003039 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF------------------SGCPDLRIIHLEDNQ 399 (854)
Q Consensus 338 ~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~------------------~~l~~L~~L~Ls~N~ 399 (854)
..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+..+ ..+++|++|+|++|+
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~ 462 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNK 462 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCc
Confidence 34567788888888877 67777777777777777777776543321 367888999999999
Q ss_pred cCCCCCccccCCCCCceeecccccccccccccc--ccccccccccCccccccC
Q 003039 400 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 400 l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~~~ 450 (854)
|+ .+|. ...+++|+.|+|++|+|++.+|..+ +.+++.|++++|+..|.+
T Consensus 463 l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 463 LK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp CS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred cC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 98 7886 5678899999999999996666544 567788899999887754
No 314
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.44 E-value=4.2e-14 Score=147.22 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=71.8
Q ss_pred eeEEEecCC-CCCccCCcccccCccCc-EEeccCCCCCCCCCCCCCCCCccEEEeCCCc-cCCCCCccccCC-CCCceee
Q 003039 343 ITVIHLSSK-NLTGNIPSDLTKLSSLV-ELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL-PNLRELY 418 (854)
Q Consensus 343 l~~L~L~~n-~l~g~lp~~i~~l~~L~-~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l-~~L~~l~ 418 (854)
|+.|+|++| ++++..+..|.++++|+ .|+|++|+++..++.....++|+.|+|++|+ |++..|..|..+ ++|+.|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 338888888 77754445577788888 8888888887555543333778888888884 775445667777 7888888
Q ss_pred ccccccccccccccccccccccccCcc
Q 003039 419 VQNNMLSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 419 l~~N~l~g~~p~~l~~~~~~l~~~~n~ 445 (854)
|++|+|+ .+|...+.++..|.+.++.
T Consensus 212 l~~N~l~-~l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 212 VSQTSVT-ALPSKGLEHLKELIARNTW 237 (239)
T ss_dssp CTTCCCC-CCCCTTCTTCSEEECTTC-
T ss_pred CCCCccc-cCChhHhccCceeeccCcc
Confidence 8888887 6777667777777766654
No 315
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.43 E-value=1.2e-13 Score=162.46 Aligned_cols=183 Identities=17% Similarity=0.112 Sum_probs=134.3
Q ss_pred cccceeeeecccCCCCCC---CcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCee--EeCC
Q 003039 263 SLPFVLSFKFGKTYDSSR---GPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWL--QCNS 337 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~l---pP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~--~c~~ 337 (854)
.+++|+.|+|+.|.++.+ |..+..+..|+.|+++.|.+...... +..+..+..+... -|. ...+ ....
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~---~n~---l~~~~~~~~~ 417 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQ---HSN---LKQMSEFSVF 417 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECT---TSE---EESCTTSCTT
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEcc---CCc---cccccchhhh
Confidence 455677777777777766 34466677777777777765442211 3333333333211 010 0000 0112
Q ss_pred CCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCC-CCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCc
Q 003039 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR 415 (854)
Q Consensus 338 ~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~ 415 (854)
..+++|+.|+|++|++++.+|..+.++++|+.|+|++|+++ +.+| .+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 35679999999999999999999999999999999999998 4555 588999999999999999988899999999999
Q ss_pred eeecccccccccccccc--ccccccccccCccccccCCC
Q 003039 416 ELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGGR 452 (854)
Q Consensus 416 ~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~~~~~ 452 (854)
.|+|++|++++..|..+ +.+++.|++++|+..|.++.
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999996555544 56788999999999887653
No 316
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.43 E-value=1.2e-13 Score=164.91 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=132.7
Q ss_pred cccceeeeecccCCCC-CCCcccchhhhceeccCCCCC-ccH-HHHHHHHhh------cCCCCccCCCCCCCCCCCCCee
Q 003039 263 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGS-IDG-VAIVSVISL------YSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s-~lpP~in~le~l~~L~l~~~~-~~~-~~~~~l~~l------~~~~~w~~~~~~pc~~~~~~~~ 333 (854)
.+++|+.|+|+.|.++ .+|+.|..+..|+.|+++.|+ +.. ..+..+..+ ..++.+... -|. ...+
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~---~n~---l~~i 320 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIG---YNN---LKTF 320 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECC---SSC---CSSC
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECC---CCc---CCcc
Confidence 4678999999999854 577779999999999999998 887 678888876 666665332 111 1122
Q ss_pred Ee--CCCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCC-ccEEEeCCCccCCCCCccccC
Q 003039 334 QC--NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPD-LRIIHLEDNQLTGPLPSSLMN 410 (854)
Q Consensus 334 ~c--~~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~-L~~L~Ls~N~l~g~~P~~l~~ 410 (854)
.- ....+++|+.|+|++|+++|.+| .|+++++|+.|+|++|+++..++.+.++++ |+.|+|++|+|+ .+|..++.
T Consensus 321 p~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 321 PVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp CCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred CchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 22 23456788888888888888888 888888888888888888855556888888 888888888888 78887776
Q ss_pred CC--CCceeeccccccccccccccc---------cccccccccCcc
Q 003039 411 LP--NLRELYVQNNMLSGTVPSSLL---------SKNVVLNYAGNI 445 (854)
Q Consensus 411 l~--~L~~l~l~~N~l~g~~p~~l~---------~~~~~l~~~~n~ 445 (854)
++ +|+.|+|++|+++|.+|..+. .+++.|++++|.
T Consensus 399 ~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~ 444 (636)
T 4eco_A 399 KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQ 444 (636)
T ss_dssp TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSC
T ss_pred cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCc
Confidence 55 788888888888887776653 256777777774
No 317
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.43 E-value=1.2e-13 Score=157.92 Aligned_cols=107 Identities=21% Similarity=0.168 Sum_probs=92.4
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+| .|.++++|+.|+|++|+|++..|..++.+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 478888888888888888889999999999999999998877 4888999999999999999777888999999999999
Q ss_pred ccccccccccccc--ccccccccccCcccc
Q 003039 420 QNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 420 ~~N~l~g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
++|++++..|..+ +++++.|++++|...
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcccccChhhccccccccEEECCCCccc
Confidence 9999996667666 677888899888543
No 318
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.43 E-value=2.1e-13 Score=147.85 Aligned_cols=170 Identities=22% Similarity=0.243 Sum_probs=133.6
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
.+..++.|++..+.++.+| .+..+..|+.|+++.|.+..... +..+..++.+... + |. ...+. ....+++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~-~--n~---l~~~~-~~~~l~~ 108 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS-G--NP---LKNVS-AIAGLQS 108 (308)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC-S--CC---CSCCG-GGTTCTT
T ss_pred HcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc-C--Cc---CCCch-hhcCCCC
Confidence 3678899999999999997 68899999999999999876433 6666666665332 1 11 11121 2345779
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
|+.|+|++|++++ +|. +..|++|+.|+|++|++++.++ +..+++|+.|+|++|++++ +|. +..+++|+.|+|++|
T Consensus 109 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 109 IKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDN 183 (308)
T ss_dssp CCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSS
T ss_pred CCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCC
Confidence 9999999999994 654 9999999999999999998766 8889999999999999995 555 899999999999999
Q ss_pred ccccccccccccccccccccCcccc
Q 003039 423 MLSGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~g~~p~~l~~~~~~l~~~~n~~l 447 (854)
++++..|-.-+.+++.|++++|...
T Consensus 184 ~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 184 KISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred ccCcChhhcCCCCCCEEEccCCccC
Confidence 9995444334677888999888543
No 319
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.43 E-value=7.1e-14 Score=153.02 Aligned_cols=172 Identities=16% Similarity=0.169 Sum_probs=114.9
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccH--HHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~--~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~ 341 (854)
++|+.|+|+.|.++.+|+. +..+..|+.|+++.|.+.. ..+..+..+ .+..+.. .-|. ...+.. .-.+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l---~~n~---l~~l~~--~~~~ 193 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRI---SEAK---LTGIPK--DLPE 193 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBC---CSSB---CSSCCS--SSCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEEC---cCCC---CCccCc--cccC
Confidence 4567777777777777765 6777777777777776642 111112211 2222211 0010 111111 1124
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+|+.|+|++|++++..|..|.++++|+.|+|++|++++.++. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 788888888888876677888888888888888888887774 778888888888888888 788888888888888888
Q ss_pred ccccccccccccc---------cccccccccCcccc
Q 003039 421 NNMLSGTVPSSLL---------SKNVVLNYAGNINL 447 (854)
Q Consensus 421 ~N~l~g~~p~~l~---------~~~~~l~~~~n~~l 447 (854)
+|+|+ .+|...+ ..+..+++.+|+..
T Consensus 273 ~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 273 TNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp SSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred CCCCC-ccChhHccccccccccccccceEeecCccc
Confidence 88888 4544332 23456777888754
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.42 E-value=9.2e-14 Score=151.20 Aligned_cols=105 Identities=15% Similarity=0.138 Sum_probs=59.3
Q ss_pred CCeeEEEecCCCCCccCCcccc-cCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~-~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|++++..|..+. .+++|+.|+|++|+|++. +....+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L 221 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISL 221 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEEC
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEEC
Confidence 4455555555555544444442 455555555555555544 33334566666666666666 34455666666666666
Q ss_pred ccccccccccccc--ccccccccccCccccc
Q 003039 420 QNNMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 420 ~~N~l~g~~p~~l--~~~~~~l~~~~n~~l~ 448 (854)
++|+|+ .+|..+ +.++..|++++|+..|
T Consensus 222 ~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred cCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 666666 556554 3455666666666554
No 321
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.42 E-value=1.5e-13 Score=163.39 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=119.1
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+.++.|+|+.|.++.+||. |..+..|+.|+|+.|++..+ ++- ...++++|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i-------------------~~~----------~f~~L~~L 102 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI-------------------EDG----------AYQSLSHL 102 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCc-------------------Chh----------HhcCCCCC
Confidence 3678999999999999986 99999999999999987641 000 12346799
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCC-CCCccccCCCCCceeeccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~l~~ 421 (854)
++|+|++|+|++..|..|.+|++|++|+|++|+|++.++. |++|++|++|+|++|+|++ .+|..++.+++|+.|+|++
T Consensus 103 ~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 182 (635)
T 4g8a_A 103 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 182 (635)
T ss_dssp CEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred CEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccC
Confidence 9999999999965556789999999999999999998885 8999999999999999985 4688999999999999999
Q ss_pred ccccccccccc
Q 003039 422 NMLSGTVPSSL 432 (854)
Q Consensus 422 N~l~g~~p~~l 432 (854)
|+|++..|..+
T Consensus 183 N~l~~~~~~~l 193 (635)
T 4g8a_A 183 NKIQSIYCTDL 193 (635)
T ss_dssp SCCCEECGGGG
T ss_pred ccccccccccc
Confidence 99996666554
No 322
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.42 E-value=4.1e-13 Score=148.88 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=123.9
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
..++++.+.++.+|..+.. .++.|+++.|.+... ...+ + ...+++|+.|+
T Consensus 21 ~~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~l----------~~~~------------~------~~~l~~L~~L~ 70 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSRL----------RAEW------------T------PTRLTNLHSLL 70 (361)
T ss_dssp TEEECCSSCCSSCCSSCCT--TCSEEECCSSCCCEE----------CTTS------------S------SSCCTTCCEEE
T ss_pred CEEEeCCCCcCccCccCCC--CCCEEECCCCCCCcc----------Chhh------------h------hhcccccCEEE
Confidence 4578899999999987653 478999999987641 0011 0 01456899999
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 71 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~- 149 (361)
T 2xot_A 71 LSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS- 149 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-
T ss_pred CCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-
Confidence 999999976777899999999999999999998886 889999999999999999888899999999999999999999
Q ss_pred cccccc------ccccccccccCccc
Q 003039 427 TVPSSL------LSKNVVLNYAGNIN 446 (854)
Q Consensus 427 ~~p~~l------~~~~~~l~~~~n~~ 446 (854)
.+|..+ +.++..|++++|..
T Consensus 150 ~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 150 RFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SCCGGGTC----CTTCCEEECCSSCC
T ss_pred eeCHHHhcCcccCCcCCEEECCCCCC
Confidence 677765 46678899998854
No 323
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.42 E-value=4.3e-13 Score=158.42 Aligned_cols=169 Identities=20% Similarity=0.203 Sum_probs=119.3
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
|..|+.|+|..|.++.+| .|..+..|+.|+|+.|.+..... +..+..+..+...+ |. ...+. ....+++|
T Consensus 42 L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~---N~---l~~l~-~l~~l~~L 111 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE---NK---IKDLS-SLKDLKKL 111 (605)
T ss_dssp HTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS---SC---CCCCT-TSTTCTTC
T ss_pred CCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC---CC---CCCCh-hhccCCCC
Confidence 455666666666666665 35666667777776666554322 44444454443211 11 11111 23456789
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. +.+..|++|+.|+|++|+|++..| +..|++|+.|+|++|+
T Consensus 112 ~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 112 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 999999999994 5 4689999999999999999987 778899999999999999996555 8999999999999999
Q ss_pred ccccccc-ccccccccccccCccccc
Q 003039 424 LSGTVPS-SLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 424 l~g~~p~-~l~~~~~~l~~~~n~~l~ 448 (854)
|++ +|. .-+.++..|++++|+...
T Consensus 187 i~~-l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 187 ISD-LRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCB-CGGGTTCTTCSEEECCSEEEEC
T ss_pred CCC-ChHHccCCCCCEEEccCCcCcC
Confidence 994 543 226778888898886543
No 324
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.42 E-value=1.1e-13 Score=159.15 Aligned_cols=176 Identities=18% Similarity=0.117 Sum_probs=122.4
Q ss_pred ceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~~l 343 (854)
.++.|+|+.|.++.++|. +..+..|+.|+++.|.+....+..+..+..++.+...+ | ....+.. ....+++|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~---n---~l~~~~~~~~~~l~~L 106 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS---N---RLKLIPLGVFTGLSNL 106 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS---S---CCCSCCTTSSTTCTTC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC---C---cCCccCcccccCCCCC
Confidence 456777788888887654 77788888888887777665455555555555543311 1 0111211 12346788
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
+.|+|++|++++..|..|.+|++|+.|+|++|++++..+. |.++++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 107 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 186 (477)
T 2id5_A 107 TKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESC
T ss_pred CEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCC
Confidence 8888888888877788888888888888888888887664 788888888888888888655556888888888888888
Q ss_pred cccccccccc--ccccccccccCcccc
Q 003039 423 MLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
++++..+..+ +.+++.|++++|+..
T Consensus 187 ~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 187 NINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp CCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred cCcEeChhhcccCcccceeeCCCCccc
Confidence 8885444333 455677777776543
No 325
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.42 E-value=2.6e-13 Score=145.78 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=110.8
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.++.|++..|.++.+|. +..+..|+.|+++.|++..... +..+..++.+...+ |. ...+. ....+++|
T Consensus 45 l~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~---n~---l~~~~-~l~~l~~L 114 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE---NK---VKDLS-SLKDLKKL 114 (291)
T ss_dssp HHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS---SC---CCCGG-GGTTCTTC
T ss_pred cCcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC---Cc---CCCCh-hhccCCCC
Confidence 3445555666666655533 5555566666666555544221 33333333332211 10 01111 12345689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|++++ + +.+..|++|+.|+|++|++++. +.+..+++|+.|+|++|+|++. +. +..+++|+.|+|++|+
T Consensus 115 ~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~-~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 115 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDI-VP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred CEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccc-hh-hcCCCccCEEECCCCc
Confidence 999999999984 4 4688899999999999999876 6788899999999999999854 43 8889999999999999
Q ss_pred cccccccc-cccccccccccCccccc
Q 003039 424 LSGTVPSS-LLSKNVVLNYAGNINLH 448 (854)
Q Consensus 424 l~g~~p~~-l~~~~~~l~~~~n~~l~ 448 (854)
|+ .+|.- -+.++..|++++|+..+
T Consensus 190 i~-~l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 IS-DLRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CC-BCGGGTTCTTCSEEEEEEEEEEC
T ss_pred CC-CChhhccCCCCCEEECcCCcccC
Confidence 98 45541 15677888888886543
No 326
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.41 E-value=3.4e-13 Score=160.24 Aligned_cols=183 Identities=14% Similarity=0.076 Sum_probs=139.3
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHH-HHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~-~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~ 340 (854)
.+.++..+++..+....+++.+..++.|+.+.+..+..... ....+..+..+..... ..+ ....+. .....+
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~l---s~n---~l~~~~~~~~~~~ 468 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---SHT---HTRVAFNGIFNGL 468 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEEC---TTS---CCEECCTTTTTTC
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccc---ccc---ccccccccccccc
Confidence 35677889999999999999999999999999886654321 1111222222222111 000 011111 123456
Q ss_pred CCeeEEEecCCCCC-ccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 341 PSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~~l~~L~L~~n~l~-g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
+.|+.|+|++|++. +.+|..|..|++|+.|+|++|+|++.+|. |.+|++|++|+|++|+|++..|..|..|++|+.|+
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 79999999999854 45788999999999999999999999886 89999999999999999988888999999999999
Q ss_pred cccccccccccccc--c-cccccccccCccccccCC
Q 003039 419 VQNNMLSGTVPSSL--L-SKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~-~~~~~l~~~~n~~l~~~~ 451 (854)
|++|+|++..|..+ + .++..|++++||..|.+.
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999997777766 2 568899999999999874
No 327
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.41 E-value=3.7e-13 Score=158.29 Aligned_cols=156 Identities=17% Similarity=0.204 Sum_probs=121.4
Q ss_pred ccceeeeecccCCCCC-CCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~-lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
+++++.|+|+.|.++. +|+.+..+..|+.|++++|++.... .+.-....+++
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------------------------~~~~~~~~l~~ 404 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF---------------------------KVALMTKNMSS 404 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT---------------------------HHHHTTTTCTT
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc---------------------------cchhhhcCCCC
Confidence 4566777777777766 4445677777777777777665310 00011234568
Q ss_pred eeEEEecCCCCCccCCcc-cccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 343 ITVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~-i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
|+.|+|++|++++.+|.. +..+++|+.|+|++|+|++.+|. +. ++|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 405 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~ 481 (562)
T 3a79_B 405 LETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVA 481 (562)
T ss_dssp CCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECC
T ss_pred CCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECC
Confidence 999999999999867765 78899999999999999887664 33 79999999999999 899988899999999999
Q ss_pred cccccccccccc---ccccccccccCccccccC
Q 003039 421 NNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 421 ~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~ 450 (854)
+|+|+ .+|... +.+++.+++++|+..|.+
T Consensus 482 ~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 482 SNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp SSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 99999 788873 567788999999998865
No 328
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.41 E-value=1.6e-13 Score=150.14 Aligned_cols=176 Identities=27% Similarity=0.226 Sum_probs=136.6
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
.+++|+.|+|+.|.++.+|+.+. ..|+.|+++.|.+.......+..+..++.+... ++.-.. ..........+ +
T Consensus 100 ~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~-~n~l~~--~~~~~~~~~~l-~ 173 (332)
T 2ft3_A 100 PLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG-GNPLEN--SGFEPGAFDGL-K 173 (332)
T ss_dssp TCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC-SCCCBG--GGSCTTSSCSC-C
T ss_pred CcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECC-CCcccc--CCCCcccccCC-c
Confidence 35688999999999999999876 789999999998876544445556556555331 111100 00001112223 7
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
|+.|+|++|+++ .+|..+. ++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..+..+++|+.|+|++
T Consensus 174 L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 250 (332)
T 2ft3_A 174 LNYLRISEAKLT-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDN 250 (332)
T ss_dssp CSCCBCCSSBCS-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCS
T ss_pred cCEEECcCCCCC-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCC
Confidence 999999999999 5887775 7999999999999998864 88999999999999999987777999999999999999
Q ss_pred ccccccccccc--ccccccccccCccccc
Q 003039 422 NMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~~~l~~~~n~~l~ 448 (854)
|+|+ .+|..+ +.+++.|++++|....
T Consensus 251 N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 251 NKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp SCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 9999 899877 5678899999886543
No 329
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.40 E-value=5.3e-13 Score=155.29 Aligned_cols=155 Identities=17% Similarity=0.218 Sum_probs=125.8
Q ss_pred cccceeeeecccCCCCC-CCcccchhhhceeccCCCCCccHHH--HHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCC
Q 003039 263 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVA--IVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDP 339 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~-lpP~in~le~l~~L~l~~~~~~~~~--~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~ 339 (854)
.++.|+.|+|+.|.++. +|+.+..+..|+.|+++.|.+.... +..+ ..
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~-----------------------------~~ 372 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMT-----------------------------TQ 372 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHH-----------------------------TT
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHH-----------------------------hh
Confidence 45677888888888887 5666888888888888888876421 1111 23
Q ss_pred CCCeeEEEecCCCCCccCCcc-cccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCcee
Q 003039 340 QPSITVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g~lp~~-i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l 417 (854)
+++|+.|+|++|++++.+|.. +..+++|+.|+|++|++++.+|. +. ++|+.|+|++|+|+ .+|..+..+++|+.|
T Consensus 373 l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L 449 (520)
T 2z7x_B 373 MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQEL 449 (520)
T ss_dssp CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEE
Confidence 458999999999999768875 78899999999999999887764 33 79999999999999 899988899999999
Q ss_pred ecccccccccccccc---ccccccccccCccccccC
Q 003039 418 YVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 418 ~l~~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~ 450 (854)
+|++|+|+ .+|... +.++..|++++|+..|.+
T Consensus 450 ~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 450 NVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 99999999 788873 556788999999988864
No 330
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.40 E-value=2.9e-13 Score=148.87 Aligned_cols=169 Identities=17% Similarity=0.213 Sum_probs=110.3
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+++.|.++.+++ +..+..|+.|.++.|.+..... +..+..++.+... -|. ...+.. ...+++|
T Consensus 176 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~---~n~---l~~~~~-~~~l~~L 245 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIG---NNK---ITDLSP-LANLSQL 245 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC---SSC---CCCCGG-GTTCTTC
T ss_pred CCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEcc---CCc---cCCCcc-hhcCCCC
Confidence 4456666777777776666 6666667777776666554222 3334444443221 111 111111 2345678
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|++++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++..|..++.+++|+.|+|++|+
T Consensus 246 ~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 246 TWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp CEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred CEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 888888888874 4 3577788888888888888775 557778888888888888887777778888888888888888
Q ss_pred cccccccccccccccccccCcc
Q 003039 424 LSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 424 l~g~~p~~l~~~~~~l~~~~n~ 445 (854)
+++..|-.-++++..|++++|+
T Consensus 323 l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 323 ITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCCCGGGGGCTTCSEESSSCC-
T ss_pred cccccChhhhhccceeehhhhc
Confidence 8866664446777777777775
No 331
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.40 E-value=5e-14 Score=155.63 Aligned_cols=171 Identities=18% Similarity=0.122 Sum_probs=85.0
Q ss_pred ceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~-~~~~~~l 343 (854)
.++.|+|+.|.++.+|+ .+..+..|+.|+++.|.+....+..+..+..++.+...+ | ....+... ...+++|
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~---n---~l~~~~~~~~~~l~~L 126 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY---N---YLSNLSSSWFKPLSSL 126 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS---S---CCSSCCHHHHTTCTTC
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC---C---cCCcCCHhHhCCCccC
Confidence 56788888888888887 588888888888888877653222233332232221100 0 00111110 1223445
Q ss_pred eEEEecCCCCCccCCc--ccccCccCcEEeccCCC-CCCCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 344 TVIHLSSKNLTGNIPS--DLTKLSSLVELWLDGNS-LTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~--~i~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
+.|+|++|+++ .+|. .+.++++|+.|+|++|+ +.+.++ .+.++++|+.|+|++|++++..|..+..+++|+.|++
T Consensus 127 ~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 205 (353)
T 2z80_A 127 TFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205 (353)
T ss_dssp SEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecC
Confidence 55555555555 3333 44445555555555542 333333 2444555555555555555444555555555555555
Q ss_pred ccccccccccccc---ccccccccccCc
Q 003039 420 QNNMLSGTVPSSL---LSKNVVLNYAGN 444 (854)
Q Consensus 420 ~~N~l~g~~p~~l---~~~~~~l~~~~n 444 (854)
++|+++ .+|... +.+++.|++++|
T Consensus 206 ~~n~l~-~~~~~~~~~~~~L~~L~L~~n 232 (353)
T 2z80_A 206 HMKQHI-LLLEIFVDVTSSVECLELRDT 232 (353)
T ss_dssp ECSCST-THHHHHHHHTTTEEEEEEESC
T ss_pred CCCccc-cchhhhhhhcccccEEECCCC
Confidence 555544 344332 233444444444
No 332
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.40 E-value=3.1e-13 Score=160.37 Aligned_cols=177 Identities=20% Similarity=0.189 Sum_probs=123.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~~ 342 (854)
++.|+.|+|+.|.++.+|+.+..+..|+.|++++|.+....+..+..+..++.+...+..--. .+.. ....+++
T Consensus 277 l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~-----~~~~~~~~~l~~ 351 (606)
T 3t6q_A 277 FSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL-----ELGTGCLENLEN 351 (606)
T ss_dssp CTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC-----BCCSSTTTTCTT
T ss_pred ccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc-----ccchhhhhccCc
Confidence 567888999999999999989999999999999988876555566666666655332110000 0000 1234567
Q ss_pred eeEEEecCCCCCccC--CcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCcc-ccCCCCCceee
Q 003039 343 ITVIHLSSKNLTGNI--PSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSS-LMNLPNLRELY 418 (854)
Q Consensus 343 l~~L~L~~n~l~g~l--p~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~-l~~l~~L~~l~ 418 (854)
|+.|+|++|++++.. |..+.++++|+.|+|++|++.+.+|. +..+++|+.|+|++|++++..|.. +..+++|+.|+
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 431 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLN 431 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEE
Confidence 777888887777554 66777777788888887777776664 677777778888877777665543 77777777788
Q ss_pred cccccccccccccc--ccccccccccCcc
Q 003039 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 419 l~~N~l~g~~p~~l--~~~~~~l~~~~n~ 445 (854)
+++|.+++..|..+ +++++.|++++|.
T Consensus 432 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 460 (606)
T 3t6q_A 432 LSHSLLDISSEQLFDGLPALQHLNLQGNH 460 (606)
T ss_dssp CTTCCCBTTCTTTTTTCTTCCEEECTTCB
T ss_pred CCCCccCCcCHHHHhCCCCCCEEECCCCC
Confidence 87777776666555 5566777777774
No 333
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.40 E-value=1.5e-12 Score=128.76 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=81.3
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.+++..+.++.+|..+. +.++.|++++|++... .+- ....+++|+.|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~-------------------~~~----------~~~~l~~L~~L~ 58 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSL-------------------PHG----------VFDKLTQLTKLS 58 (177)
T ss_dssp TEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCC-------------------CTT----------TTTTCTTCSEEE
T ss_pred CEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEe-------------------CHH----------HhcCcccccEEE
Confidence 345566777777765443 4666777776655430 000 012234677777
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..+..+.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++++
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 59 LSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 777777744444466777777777777777776665 5667777777777777774444445667777777777777775
Q ss_pred ccc
Q 003039 427 TVP 429 (854)
Q Consensus 427 ~~p 429 (854)
..|
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 554
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.40 E-value=6.9e-14 Score=151.65 Aligned_cols=177 Identities=16% Similarity=0.079 Sum_probs=117.4
Q ss_pred cccceeeeecccCCCCCCCcc-c--chhhhceeccCCCCCccHH----HHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe
Q 003039 263 SLPFVLSFKFGKTYDSSRGPL-L--NAMEINKYLERNDGSIDGV----AIVSVISLYSSADWAQEGGDPCLPVPWSWLQC 335 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~-i--n~le~l~~L~l~~~~~~~~----~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c 335 (854)
.++.++.|+|+.|.++..+|. + ..+..|+.|+++.|.+... ....+..+..++.+...+ | ....+.|
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~---n---~l~~~~~ 162 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQ---A---HSPAFSC 162 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEEC---C---SSCCCCT
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeC---C---CcchhhH
Confidence 345678889999988865554 5 8888899999998887641 112223344444442211 1 0122222
Q ss_pred -CCCCCCCeeEEEecCCCCCcc--CC--cccccCccCcEEeccCCCCCCCCCC----CCCCCCccEEEeCCCccCCCCCc
Q 003039 336 -NSDPQPSITVIHLSSKNLTGN--IP--SDLTKLSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGPLPS 406 (854)
Q Consensus 336 -~~~~~~~l~~L~L~~n~l~g~--lp--~~i~~l~~L~~L~L~~N~l~~~~p~----~~~l~~L~~L~Ls~N~l~g~~P~ 406 (854)
....+++|+.|+|++|++.+. ++ ..+.++++|++|+|++|+|+...+. +.++++|++|+|++|+|++.+|.
T Consensus 163 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 163 EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred HHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 123566788888888887652 32 2346778888888888888654332 35678888888888888877777
Q ss_pred cccCC---CCCceeeccccccccccccccccccccccccCccc
Q 003039 407 SLMNL---PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 407 ~l~~l---~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~ 446 (854)
.++.+ ++|+.|+|++|+|+ .+|..+.++++.|++++|..
T Consensus 243 ~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 243 SAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRL 284 (310)
T ss_dssp CCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCC
T ss_pred hHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcC
Confidence 77776 58888888888888 77877777778888877753
No 335
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.40 E-value=1.3e-12 Score=129.27 Aligned_cols=121 Identities=25% Similarity=0.276 Sum_probs=102.6
Q ss_pred CCCeeEeCCCC--------CCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCc
Q 003039 329 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 399 (854)
Q Consensus 329 ~~~~~~c~~~~--------~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~ 399 (854)
.|..+.|+..+ .++|+.|+|++|++++..+..+.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 36677775432 35899999999999966666789999999999999999998887 6899999999999999
Q ss_pred cCCCCCccccCCCCCceeecccccccccccccc---ccccccccccCccccccC
Q 003039 400 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 400 l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l---~~~~~~l~~~~n~~l~~~ 450 (854)
|++..|..+..+++|+.|+|++|+|+ .+|... +.++..|++++|+..|..
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99776677899999999999999999 666655 567788999999877643
No 336
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.39 E-value=6.3e-13 Score=133.75 Aligned_cols=130 Identities=18% Similarity=0.172 Sum_probs=109.0
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.++++.|.++.+|+.+. ..++.|++++|.+... .. ....+++|+.|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~i-----------p~-------------------~~~~l~~L~~L~ 60 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLV-----------PK-------------------ELSNYKHLTLID 60 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSC-----------CG-------------------GGGGCTTCCEEE
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchh-----------HH-------------------HhhcccCCCEEE
Confidence 357788999999998764 5789999999987641 00 012356899999
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 61 Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999999977777899999999999999999999885 8999999999999999995555579999999999999999985
Q ss_pred ccc
Q 003039 427 TVP 429 (854)
Q Consensus 427 ~~p 429 (854)
.-.
T Consensus 141 ~c~ 143 (193)
T 2wfh_A 141 DCN 143 (193)
T ss_dssp SGG
T ss_pred CCc
Confidence 443
No 337
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.39 E-value=8.1e-13 Score=156.73 Aligned_cols=154 Identities=15% Similarity=0.148 Sum_probs=123.4
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+.++.|+|+.|.++.+|| .+..+..|+.|+++.|.+... .|- ....+++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i-------------------~~~----------~~~~l~~L 82 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETI-------------------EDK----------AWHGLHHL 82 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccccc-------------------CHH----------Hhhchhhc
Confidence 567889999999999998 599999999999999877641 000 11245689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCC-CCCccccCCCCCceeeccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~l~~ 421 (854)
+.|+|++|++++..|..|++|++|++|+|++|++++.++ .++++++|++|+|++|++++ .+|..|+++++|+.|+|++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999997778899999999999999999998875 48889999999999999986 6799999999999999999
Q ss_pred ccccccccccc--cccc----ccccccCcccc
Q 003039 422 NMLSGTVPSSL--LSKN----VVLNYAGNINL 447 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~----~~l~~~~n~~l 447 (854)
|++++..|..+ +.++ ..+++++|...
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~ 194 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPID 194 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcc
Confidence 99996555544 2222 35777777543
No 338
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.38 E-value=2.7e-13 Score=130.15 Aligned_cols=127 Identities=17% Similarity=0.189 Sum_probs=101.7
Q ss_pred ccceeeeecccCCCC--CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003039 264 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s--~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~ 341 (854)
.++++.|+++.|.++ .+|+.+..+..|+.|+++.|.+... . ....++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------~--------------------~~~~l~ 64 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-----------A--------------------NLPKLN 64 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-----------T--------------------TCCCCT
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-----------h--------------------hhhcCC
Confidence 356788899999998 8888888999999999988877641 0 012345
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCC--CCCCCCCCccEEEeCCCccCCCCC---ccccCCCCCce
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 416 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~--p~~~~l~~L~~L~Ls~N~l~g~~P---~~l~~l~~L~~ 416 (854)
+|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+ +.+..+++|++|+|++|++++..+ ..+..+++|+.
T Consensus 65 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 144 (149)
T 2je0_A 65 KLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTY 144 (149)
T ss_dssp TCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCE
T ss_pred CCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccc
Confidence 8899999999999778888888999999999999998854 568889999999999999986544 47888889998
Q ss_pred eeccc
Q 003039 417 LYVQN 421 (854)
Q Consensus 417 l~l~~ 421 (854)
|++++
T Consensus 145 L~l~d 149 (149)
T 2je0_A 145 LDGYD 149 (149)
T ss_dssp ETTBC
T ss_pred ccCCC
Confidence 88764
No 339
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.38 E-value=9e-13 Score=139.42 Aligned_cols=148 Identities=20% Similarity=0.210 Sum_probs=92.8
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.++.|++..|.++.+| .+..+..|+.|++++|++..... ...+++|
T Consensus 40 l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~-------------------------------l~~l~~L 87 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP-------------------------------LKDLTKL 87 (263)
T ss_dssp HTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-------------------------------GTTCSSC
T ss_pred cCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh-------------------------------hccCCCC
Confidence 456667777777777776 56667777777777776553110 1234567
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|+ .+|... . ++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+
T Consensus 88 ~~L~L~~N~l~-~l~~~~-~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 88 EELSVNRNRLK-NLNGIP-S-ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CEEECCSSCCS-CCTTCC-C-SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSC
T ss_pred CEEECCCCccC-CcCccc-c-CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCc
Confidence 77777777777 355422 2 6777777777777763 456777777777777777773 44 56777777777777777
Q ss_pred cccccccccccccccccccCcccccc
Q 003039 424 LSGTVPSSLLSKNVVLNYAGNINLHE 449 (854)
Q Consensus 424 l~g~~p~~l~~~~~~l~~~~n~~l~~ 449 (854)
+++.-.-.-+.++..|++++|+..+.
T Consensus 162 i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 162 ITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CcchHHhccCCCCCEEeCCCCcccCC
Confidence 77441111145566667777655443
No 340
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.38 E-value=4.3e-13 Score=161.36 Aligned_cols=91 Identities=24% Similarity=0.200 Sum_probs=54.1
Q ss_pred cccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccccccccc---cccc
Q 003039 361 LTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKN 436 (854)
Q Consensus 361 i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l---~~~~ 436 (854)
+.+|++|+.|+|++|+|+..++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+ +.++
T Consensus 532 ~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L 611 (680)
T 1ziw_A 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNL 611 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTC
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccccccc
Confidence 44555555555555555544443 5666666666666666664333445666666666666666664333322 3556
Q ss_pred ccccccCccccccCC
Q 003039 437 VVLNYAGNINLHEGG 451 (854)
Q Consensus 437 ~~l~~~~n~~l~~~~ 451 (854)
..+++++|+..|.+.
T Consensus 612 ~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 612 TELDMRFNPFDCTCE 626 (680)
T ss_dssp SEEECTTCCCCBCCC
T ss_pred CEEEccCCCcccCCc
Confidence 677777887777664
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.38 E-value=7.2e-13 Score=143.61 Aligned_cols=155 Identities=20% Similarity=0.198 Sum_probs=121.2
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~ 341 (854)
.++.|+.|+|+.|.++.+||. +..+..|+.|+++.|++..... +. ..-| ...++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~------------~~~~-----------~~~l~ 197 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG--LM------------AALC-----------PHKFP 197 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH--HH------------TTSC-----------TTSSC
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh--hh------------HHHh-----------hhcCC
Confidence 466889999999999999875 8899999999999998653110 00 0111 12356
Q ss_pred CeeEEEecCCCCCccCCcc----cccCccCcEEeccCCCCCCCCC-CCCCC---CCccEEEeCCCccCCCCCccccCCCC
Q 003039 342 SITVIHLSSKNLTGNIPSD----LTKLSSLVELWLDGNSLTGPIP-DFSGC---PDLRIIHLEDNQLTGPLPSSLMNLPN 413 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~----i~~l~~L~~L~L~~N~l~~~~p-~~~~l---~~L~~L~Ls~N~l~g~~P~~l~~l~~ 413 (854)
+|+.|+|++|+|+ .+|.. +.++++|++|+|++|+|++..| .+..+ ++|++|+|++|+|+ .+|..+. ++
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 8999999999998 45542 5788999999999999999854 46665 79999999999999 8898875 79
Q ss_pred Cceeecccccccccccc-ccccccccccccCcccc
Q 003039 414 LRELYVQNNMLSGTVPS-SLLSKNVVLNYAGNINL 447 (854)
Q Consensus 414 L~~l~l~~N~l~g~~p~-~l~~~~~~l~~~~n~~l 447 (854)
|+.|+|++|+|++ +|. .-+++++.|++++|+..
T Consensus 274 L~~L~Ls~N~l~~-~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNR-APQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCS-CCCTTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCC-CchhhhCCCccEEECcCCCCC
Confidence 9999999999995 333 23677889999999754
No 342
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=9.3e-13 Score=129.65 Aligned_cols=105 Identities=25% Similarity=0.314 Sum_probs=84.3
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+.+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|++|+|++|+|++..|..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3567888888888 6887774 7888999999999888775 7888899999999999986555667888899999999
Q ss_pred ccccccccccc-c--ccccccccccCccccccC
Q 003039 421 NNMLSGTVPSS-L--LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 421 ~N~l~g~~p~~-l--~~~~~~l~~~~n~~l~~~ 450 (854)
+|+|+ .+|.. + +.++..|++++|+..|.+
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99988 45554 3 566788888888887765
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.36 E-value=8.8e-13 Score=141.69 Aligned_cols=155 Identities=21% Similarity=0.260 Sum_probs=124.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+|+.|.++.++| +..+..|+.|+++.|.+.. +..+..+..++.+... -|. ...+. ....+++|
T Consensus 67 l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~L~---~n~---i~~~~-~l~~l~~L 136 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD--LSSLKDLKKLKSLSLE---HNG---ISDIN-GLVHLPQL 136 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC--GGGGTTCTTCCEEECT---TSC---CCCCG-GGGGCTTC
T ss_pred CCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC--ChhhccCCCCCEEECC---CCc---CCCCh-hhcCCCCC
Confidence 5678899999999999998 9999999999999998876 3346666666665332 121 11111 12346799
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|++++ + +.+..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+|+ .+|. +..+++|+.|+|++|+
T Consensus 137 ~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~-~l~~-l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 137 ESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQE 211 (291)
T ss_dssp CEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-BCGG-GTTCTTCSEEEEEEEE
T ss_pred CEEEccCCcCCc-c-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCC-CChh-hccCCCCCEEECcCCc
Confidence 999999999995 4 679999999999999999999877 999999999999999999 5664 9999999999999999
Q ss_pred ccccccccccc
Q 003039 424 LSGTVPSSLLS 434 (854)
Q Consensus 424 l~g~~p~~l~~ 434 (854)
++ ..|.....
T Consensus 212 i~-~~~~~~~~ 221 (291)
T 1h6t_A 212 CL-NKPINHQS 221 (291)
T ss_dssp EE-CCCEECCS
T ss_pred cc-CCcccccc
Confidence 98 56655433
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.36 E-value=5.6e-13 Score=138.63 Aligned_cols=149 Identities=19% Similarity=0.124 Sum_probs=103.0
Q ss_pred ceeeeecccCCCCCCCc-ccchhhhceeccCCCCC-ccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~-~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
.++.|+|+.|.++.+|+ .+..+..|+.|+++.|. +..+.... ...+++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~-----------------------------f~~l~~L 82 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHS-----------------------------FYNLSKV 82 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTT-----------------------------EESCTTC
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhH-----------------------------cCCCcCC
Confidence 56788889999999988 48888999999998886 65311000 0123467
Q ss_pred eEEEecC-CCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCcc---EEEeCCC-ccCCCCCccccCCCCCc-ee
Q 003039 344 TVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLR---IIHLEDN-QLTGPLPSSLMNLPNLR-EL 417 (854)
Q Consensus 344 ~~L~L~~-n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~---~L~Ls~N-~l~g~~P~~l~~l~~L~-~l 417 (854)
+.|+|++ |+|++..+..|.++++|+.|+|++|++++ +|.+..+++|+ .|+|++| ++++..+..|..+++|+ .|
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 7777777 77775444567777777777777777776 34466666666 7777777 77754445677777777 77
Q ss_pred eccccccccccccccc--cccccccccCcc
Q 003039 418 YVQNNMLSGTVPSSLL--SKNVVLNYAGNI 445 (854)
Q Consensus 418 ~l~~N~l~g~~p~~l~--~~~~~l~~~~n~ 445 (854)
++++|+++ .+|...+ .+++.|++++|.
T Consensus 162 ~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 162 KLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp ECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred EcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 77777777 6766543 245666677664
No 345
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.35 E-value=2.2e-12 Score=130.02 Aligned_cols=131 Identities=12% Similarity=0.205 Sum_probs=107.0
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+++|+.|+|+.|.++.++ .+..+..|+.|+++.|.+.... ... ...+++|
T Consensus 65 l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~---------~~~--------------------l~~l~~L 114 (197)
T 4ezg_A 65 AHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDK---------IPN--------------------LSGLTSL 114 (197)
T ss_dssp CTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGG---------SCC--------------------CTTCTTC
T ss_pred CCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCccc---------Chh--------------------hcCCCCC
Confidence 457899999999887764 7888999999999999876410 000 1235689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|++++..|..+.++++|+.|+|++|.+.+.+|.+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999999889999999999999999999944445689999999999999999995 65 79999999999999999
Q ss_pred ccc
Q 003039 424 LSG 426 (854)
Q Consensus 424 l~g 426 (854)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 873
No 346
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.35 E-value=3.1e-13 Score=156.04 Aligned_cols=171 Identities=13% Similarity=-0.008 Sum_probs=101.9
Q ss_pred ccceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE--------
Q 003039 264 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-------- 334 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP-~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-------- 334 (854)
.+.|+.|+|+.|.++.+|| .|..+..|+.|++++|.+..... +..+..+..+... -| ...++.
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls---~N---~l~~l~~~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN---NN---YVQELLVGPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECC---SS---EEEEEEECTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEec---CC---cCCCCCCCCCcCEE
Confidence 3478999999999999987 59999999999999999864222 5555555555321 11 012222
Q ss_pred -eCCCCC--------CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CC-CCCCccEEEeCCCccCCC
Q 003039 335 -CNSDPQ--------PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FS-GCPDLRIIHLEDNQLTGP 403 (854)
Q Consensus 335 -c~~~~~--------~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~-~l~~L~~L~Ls~N~l~g~ 403 (854)
.+...+ ++|+.|+|++|+|++..|..++++++|+.|+|++|.|++.+|. +. .+++|+.|+|++|+|++.
T Consensus 105 ~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 105 HAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp ECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred ECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 111111 2345556666666655555666666666666666666665443 33 466666666666666643
Q ss_pred CCccccCCCCCceeecccccccccccccc--ccccccccccCcc
Q 003039 404 LPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 404 ~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~~n~ 445 (854)
|. +..+++|+.|+|++|+|++ +|..+ +.++..|++++|.
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNK 225 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSC
T ss_pred -cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCc
Confidence 22 3346666666666666663 33333 4455666666654
No 347
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.34 E-value=2e-12 Score=155.63 Aligned_cols=162 Identities=14% Similarity=0.071 Sum_probs=113.3
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~~ 342 (854)
+.++.|+|+.|.++.+|+. +..+..|+.|+++.|.+....+..+.++..++.+...+ |. ...+.. ....+++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~---n~---l~~l~~~~~~~l~~ 98 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH---NE---LSQLSDKTFAFCTN 98 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS---SC---CCCCCTTTTTTCTT
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC---Cc---cCccChhhhccCCC
Confidence 4678899999999999986 99999999999999988776666666666666553321 10 112221 1334567
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCcccc--CCCCCceeec
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLM--NLPNLRELYV 419 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~--~l~~L~~l~l 419 (854)
|+.|+|++|++++..|..|++|++|++|+|++|++++.+|. +.++++|++|+|++|++++..|..+. .+++|+.|++
T Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp CSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred CCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 77777777777755556777777777777777777776664 66777777777777777765555543 4567777777
Q ss_pred ccccccccccccc
Q 003039 420 QNNMLSGTVPSSL 432 (854)
Q Consensus 420 ~~N~l~g~~p~~l 432 (854)
++|++++..|..+
T Consensus 179 ~~n~l~~~~~~~~ 191 (680)
T 1ziw_A 179 SSNQIKEFSPGCF 191 (680)
T ss_dssp TTCCCCCBCTTGG
T ss_pred CCCcccccChhhh
Confidence 7777775555433
No 348
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=2.8e-12 Score=126.74 Aligned_cols=104 Identities=22% Similarity=0.349 Sum_probs=89.2
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
-+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999998 8998875 8999999999999999875 88899999999999999965555678999999999999
Q ss_pred cccccccccc-c--ccccccccccCccccccC
Q 003039 422 NMLSGTVPSS-L--LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 422 N~l~g~~p~~-l--~~~~~~l~~~~n~~l~~~ 450 (854)
|+|+ .+|.. + +.++..|++++|+..|.+
T Consensus 91 N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred Cccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999 66665 3 567788999999988765
No 349
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.34 E-value=3.7e-12 Score=125.36 Aligned_cols=89 Identities=27% Similarity=0.328 Sum_probs=80.9
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 4789999999999987788999999999999999999999887 689999999999999999766667999999999999
Q ss_pred cccccccccc
Q 003039 420 QNNMLSGTVP 429 (854)
Q Consensus 420 ~~N~l~g~~p 429 (854)
++|+++...+
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 9999995443
No 350
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.33 E-value=2e-12 Score=159.61 Aligned_cols=161 Identities=16% Similarity=0.069 Sum_probs=83.7
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCc-cHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSI-DGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~-~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~~ 341 (854)
+.++.|+|+.|.++.++|. +..+..|+.|+++.|.. ..+.+.++..+..++.+...+ | ....+. -....++
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~---N---~l~~~~p~~~~~l~ 97 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS---S---KIYFLHPDAFQGLF 97 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT---C---CCCEECTTSSCSCS
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC---C---cCcccCHhHccCCc
Confidence 5678888999999888654 88999999999988743 221122333333333332110 0 011111 1122344
Q ss_pred CeeEEEecCCCCCccCCcc--cccCccCcEEeccCCCCCCCCC--CCCCCCCccEEEeCCCccCCCCCccccCC--CCCc
Q 003039 342 SITVIHLSSKNLTGNIPSD--LTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSSLMNL--PNLR 415 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~--i~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l--~~L~ 415 (854)
+|+.|+|++|+|++.+|.. |.+|++|+.|+|++|++++..+ .|++|++|++|+|++|++++..|..++.+ ++|+
T Consensus 98 ~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~ 177 (844)
T 3j0a_A 98 HLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177 (844)
T ss_dssp SCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSC
T ss_pred ccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccc
Confidence 5555555555555444443 5555555555555555554433 24555555555555555555555555544 4555
Q ss_pred eeeccccccccccccc
Q 003039 416 ELYVQNNMLSGTVPSS 431 (854)
Q Consensus 416 ~l~l~~N~l~g~~p~~ 431 (854)
.|+|++|.+++.+|..
T Consensus 178 ~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 178 FFSLAANSLYSRVSVD 193 (844)
T ss_dssp CCEECCSBSCCCCCCC
T ss_pred eEECCCCccccccccc
Confidence 5555555555444443
No 351
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.33 E-value=2.9e-12 Score=150.53 Aligned_cols=153 Identities=16% Similarity=0.150 Sum_probs=122.9
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
..++.|+|+.|.++.+++. +..+..|+.|+++.|++.... +- ....+++|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~-------------------~~----------~~~~l~~L 78 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE-------------------DG----------AYQSLSHL 78 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEEC-------------------TT----------TTTTCTTC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccC-------------------cc----------cccCchhC
Confidence 3578899999999999875 999999999999999776410 00 01235689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCC-CCCccccCCCCCceeeccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~l~~ 421 (854)
+.|+|++|++++..|..|.+|++|++|+|++|++++.++ .++++++|++|+|++|++++ .+|..|+++++|+.|++++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~ 158 (570)
T 2z63_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTT
T ss_pred CEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcC
Confidence 999999999997777889999999999999999998777 48899999999999999986 4799999999999999999
Q ss_pred ccccccccccc--cccc----ccccccCccc
Q 003039 422 NMLSGTVPSSL--LSKN----VVLNYAGNIN 446 (854)
Q Consensus 422 N~l~g~~p~~l--~~~~----~~l~~~~n~~ 446 (854)
|++++..|..+ +.++ ..+++++|..
T Consensus 159 n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l 189 (570)
T 2z63_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (570)
T ss_dssp SCCCEECGGGGHHHHTCTTCCCEEECTTCCC
T ss_pred CccceecHHHccchhccchhhhhcccCCCCc
Confidence 99995555544 3344 5567777754
No 352
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.33 E-value=1.6e-12 Score=151.15 Aligned_cols=144 Identities=13% Similarity=0.032 Sum_probs=95.5
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.|+++.|.++.+|+.+. +.++.|+++.|.+....+..+. .+++|+.|+
T Consensus 3 ~~l~ls~n~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~-----------------------------~l~~L~~L~ 51 (520)
T 2z7x_B 3 FLVDRSKNGLIHVPKDLS--QKTTILNISQNYISELWTSDIL-----------------------------SLSKLRILI 51 (520)
T ss_dssp CEEECTTSCCSSCCCSCC--TTCSEEECCSSCCCCCCHHHHT-----------------------------TCTTCCEEE
T ss_pred ceEecCCCCccccccccc--ccccEEECCCCcccccChhhcc-----------------------------ccccccEEe
Confidence 467788888888888766 7888888888877653222222 234677777
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCC-CCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|++|+|++|+|++.++. .+++|++|+|++|+|++ .+|..|+++++|+.|+|++|++++
T Consensus 52 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 52 ISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred cCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch
Confidence 777777766666777777777777777777744333 67777777777777775 466777777777777777777764
Q ss_pred cccccccccc--ccccccCcc
Q 003039 427 TVPSSLLSKN--VVLNYAGNI 445 (854)
Q Consensus 427 ~~p~~l~~~~--~~l~~~~n~ 445 (854)
..-.-+.++ +.|++++|.
T Consensus 130 -~~~~~l~~L~L~~L~l~~n~ 149 (520)
T 2z7x_B 130 -SSVLPIAHLNISKVLLVLGE 149 (520)
T ss_dssp -GGGGGGTTSCEEEEEEEECT
T ss_pred -hhccccccceeeEEEeeccc
Confidence 222223444 566666554
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.32 E-value=3.1e-13 Score=163.47 Aligned_cols=89 Identities=33% Similarity=0.392 Sum_probs=48.3
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
+|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|+.+++.|++|++|++|+|++|+|+ .+|..|++|++|+.|+|++
T Consensus 248 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~ 325 (727)
T 4b8c_D 248 FLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEG 325 (727)
T ss_dssp SCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTT
T ss_pred CCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCC
Confidence 4555555555555 5555555555555555555555543334555555555555555554 4555555555555555555
Q ss_pred ccccccccccc
Q 003039 422 NMLSGTVPSSL 432 (854)
Q Consensus 422 N~l~g~~p~~l 432 (854)
|+|+|.+|..+
T Consensus 326 N~l~~~~p~~~ 336 (727)
T 4b8c_D 326 NPLEKQFLKIL 336 (727)
T ss_dssp SCCCSHHHHHH
T ss_pred CccCCCChHHH
Confidence 55555554443
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.32 E-value=1.1e-12 Score=158.51 Aligned_cols=159 Identities=23% Similarity=0.270 Sum_probs=97.6
Q ss_pred cccccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCC
Q 003039 261 NLSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 340 (854)
Q Consensus 261 ~~~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~ 340 (854)
..+.+.++.|+|..|.+...|.. .++.+.|+.|.+....+. |.. .....-....+
T Consensus 169 ~~s~~~~~~l~L~~n~~~~~~~~-----~l~~l~Ls~~~i~~~~~~------------------~n~--~~~~~~~~~~l 223 (727)
T 4b8c_D 169 AVSTPLTPKIELFANGKDEANQA-----LLQHKKLSQYSIDEDDDI------------------ENR--MVMPKDSKYDD 223 (727)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred eecCCccceEEeeCCCCCcchhh-----HhhcCccCcccccCcccc------------------ccc--eecChhhhccC
Confidence 34445677888888888776544 355566666665542110 000 00001112346
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecc
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~ 420 (854)
+.|+.|+|++|+|. .+|..+++|++|+.|+|++|+|+.+++.|++|++|++|+|++|+|+ .+|..|++|++|+.|+|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 78999999999999 8999999999999999999999966667999999999999999999 899999999999999999
Q ss_pred cccccccccccc--ccccccccccCcccc
Q 003039 421 NNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 421 ~N~l~g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
+|.|+ .+|..+ +.++..|++++|...
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 99998 999887 677899999999643
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.32 E-value=1.7e-12 Score=153.30 Aligned_cols=155 Identities=22% Similarity=0.266 Sum_probs=123.6
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+|+.|.++.+|| +..+..|+.|.|+.|.+.. +..+..+..+..+... -|. ...+. ....+++|
T Consensus 64 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~--l~~l~~l~~L~~L~Ls---~N~---l~~l~-~l~~l~~L 133 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD--LSSLKDLKKLKSLSLE---HNG---ISDIN-GLVHLPQL 133 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC--CTTSTTCTTCCEEECT---TSC---CCCCG-GGGGCTTC
T ss_pred CCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC--ChhhccCCCCCEEEec---CCC---CCCCc-cccCCCcc
Confidence 5678999999999999998 8999999999999998875 2345555555555332 121 11111 12356799
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|++ + +.|..|++|+.|+|++|+|++.+| +..|++|+.|+|++|+|++ +| .|..|++|+.|+|++|+
T Consensus 134 ~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 134 ESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp SEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEE
T ss_pred CEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCc
Confidence 999999999995 4 679999999999999999999888 9999999999999999995 54 69999999999999999
Q ss_pred ccccccccccc
Q 003039 424 LSGTVPSSLLS 434 (854)
Q Consensus 424 l~g~~p~~l~~ 434 (854)
++ ..|...+.
T Consensus 209 l~-~~p~~~~~ 218 (605)
T 1m9s_A 209 CL-NKPINHQS 218 (605)
T ss_dssp EE-CCCCCCCS
T ss_pred Cc-CCcccccc
Confidence 99 45544433
No 356
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.32 E-value=6e-12 Score=124.38 Aligned_cols=90 Identities=23% Similarity=0.321 Sum_probs=80.7
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 4799999999999987788999999999999999999998887 688999999999999999655556999999999999
Q ss_pred cccccccccccc
Q 003039 420 QNNMLSGTVPSS 431 (854)
Q Consensus 420 ~~N~l~g~~p~~ 431 (854)
++|++. ..|..
T Consensus 113 ~~N~~~-c~~~~ 123 (174)
T 2r9u_A 113 YNNPWD-CECRD 123 (174)
T ss_dssp CSSCBC-TTBGG
T ss_pred CCCCcc-ccccc
Confidence 999999 55543
No 357
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.32 E-value=2.5e-12 Score=126.00 Aligned_cols=105 Identities=22% Similarity=0.256 Sum_probs=89.2
Q ss_pred CCCeeEEEecCCCCC-ccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 340 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~-g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
+++|+.|+|++|+++ |.+|..+..+++|+.|+|++|+|++. +.+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 457999999999998 88898889999999999999999887 7788899999999999999977888888899999999
Q ss_pred ccccccccccc--ccc--ccccccccccCccc
Q 003039 419 VQNNMLSGTVP--SSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 419 l~~N~l~g~~p--~~l--~~~~~~l~~~~n~~ 446 (854)
|++|+|+ .+| ..+ +.++..|++++|+.
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcC
Confidence 9999998 444 344 56778888888853
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.31 E-value=2.8e-12 Score=150.45 Aligned_cols=89 Identities=26% Similarity=0.297 Sum_probs=82.7
Q ss_pred CCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCC-CccccCCCCCcee
Q 003039 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL-PSSLMNLPNLREL 417 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~-P~~l~~l~~L~~l 417 (854)
.+++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|+++ |.+++|++|+.|+|++|+|++.+ |..|+.|++|+.|
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 3568999999999999 9999999999999999999999984 58999999999999999999776 9999999999999
Q ss_pred eccccccccccc
Q 003039 418 YVQNNMLSGTVP 429 (854)
Q Consensus 418 ~l~~N~l~g~~p 429 (854)
+|++|+|++..|
T Consensus 539 ~L~~N~l~~~~~ 550 (567)
T 1dce_A 539 NLQGNSLCQEEG 550 (567)
T ss_dssp ECTTSGGGGSSS
T ss_pred EecCCcCCCCcc
Confidence 999999995544
No 359
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.31 E-value=1.9e-12 Score=124.14 Aligned_cols=106 Identities=19% Similarity=0.204 Sum_probs=91.5
Q ss_pred CCCeeEEEecCCCCC-ccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 340 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~-g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
.++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++. +.+.++++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 357999999999998 88999899999999999999999988 7789999999999999999977888888899999999
Q ss_pred ccccccccc-ccccc--ccccccccccCccc
Q 003039 419 VQNNMLSGT-VPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 419 l~~N~l~g~-~p~~l--~~~~~~l~~~~n~~ 446 (854)
+++|++++. .|..+ ++++..|++++|..
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 999999952 23444 66778889988853
No 360
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.31 E-value=3.2e-13 Score=146.88 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=117.0
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~ 342 (854)
+++|+.|+|+.|.++.++|. +..+..|+.|+++.|.+....+. .+ ...+++
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------~~-------------------~~~l~~ 170 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA---------EL-------------------AASSDT 170 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG---------GG-------------------GGGTTT
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH---------HH-------------------hhccCc
Confidence 45567777777777777764 67777777777777766531000 00 013468
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccc
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N 422 (854)
|+.|+|++|+|++ +|. ...+++|+.|+|++|+|++.++.+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 171 L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 171 LEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp CCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTC
T ss_pred CCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCC
Confidence 9999999999994 443 44699999999999999999888999999999999999999 68999999999999999999
Q ss_pred ccc-ccccccc--ccccccccccCcccc
Q 003039 423 MLS-GTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~-g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
+++ +.+|..+ +..+..+++.++..+
T Consensus 248 ~~~~~~~~~~~~~~~~L~~l~l~~~~~l 275 (317)
T 3o53_A 248 GFHCGTLRDFFSKNQRVQTVAKQTVKKL 275 (317)
T ss_dssp CCBHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CccCcCHHHHHhccccceEEECCCchhc
Confidence 998 6666655 445566666655443
No 361
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.31 E-value=3.2e-12 Score=140.44 Aligned_cols=169 Identities=17% Similarity=0.197 Sum_probs=121.3
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+++|+.|++..|.++.+++ +..+..|+.|+++.|.+..... +..+..+...... -|. ...+.. ...+++|
T Consensus 154 l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~---~n~---l~~~~~-~~~~~~L 223 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAY---VNQ---ITDITP-VANMTRL 223 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECC---SSC---CCCCGG-GGGCTTC
T ss_pred CCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccccccc--ccCCCccceeecc---cCC---CCCCch-hhcCCcC
Confidence 4567778888888888777 7777888888888777654222 4444444443221 111 111111 2345689
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+++ .+|. +..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++ + +.+..+++|+.|+|++|+
T Consensus 224 ~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 224 NSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp CEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSC
T ss_pred CEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCc
Confidence 99999999998 4555 88899999999999998874 668888999999999999985 4 458888999999999999
Q ss_pred ccccccccc--ccccccccccCcccc
Q 003039 424 LSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 424 l~g~~p~~l--~~~~~~l~~~~n~~l 447 (854)
+++..|..+ +++++.|++++|+..
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred CCCcChhHhhccccCCEEEccCCccc
Confidence 987666655 667788888888643
No 362
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.31 E-value=4.7e-13 Score=156.71 Aligned_cols=174 Identities=17% Similarity=0.128 Sum_probs=90.1
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPS 342 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~-~~~~~~ 342 (854)
..++.|+|+.|.++.++|. +..+..|+.|+++.|.+....+.++..+..++.+...+ |. ..++... ...+++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~---n~---l~~~~~~~~~~l~~ 99 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD---NH---LSSLSSSWFGPLSS 99 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT---SC---CCSCCHHHHTTCTT
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC---Cc---cCccCHHHhccCCC
Confidence 3567777888888777654 77778888888887776653333333333333321110 00 1111100 123345
Q ss_pred eeEEEecCCCCCc-cCCcccccCccCcEEeccCCCCCCCCC--CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 343 ITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 343 l~~L~L~~n~l~g-~lp~~i~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
|+.|+|++|++++ .+|..+++|++|+.|+|++|++.+.+| .+.++++|++|+|++|++++.+|..++.+++|+.|++
T Consensus 100 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 100 LKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp CCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEec
Confidence 5555555555553 234455555555555555555333222 2555555555555555555555555555555555555
Q ss_pred ccccccccccccc---ccccccccccCcc
Q 003039 420 QNNMLSGTVPSSL---LSKNVVLNYAGNI 445 (854)
Q Consensus 420 ~~N~l~g~~p~~l---~~~~~~l~~~~n~ 445 (854)
++|.+. .+|..+ +.+++.|++++|.
T Consensus 180 ~~n~~~-~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 180 HLSESA-FLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp ECSBST-THHHHHHHSTTTBSEEEEESCB
T ss_pred ccCccc-ccchhhHhhcccccEEEccCCc
Confidence 555554 444433 3455566666654
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.30 E-value=3.2e-12 Score=135.20 Aligned_cols=132 Identities=15% Similarity=0.202 Sum_probs=112.8
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+++|+.|+|+.|.++.+|| +..+..|+.|+++.|++.. . ++. . . ++|
T Consensus 62 l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~--------------l-----~~~-----~-------~-~~L 108 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN--------------L-----NGI-----P-------S-ACL 108 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC--------------C-----TTC-----C-------C-SSC
T ss_pred CCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC--------------c-----Ccc-----c-------c-Ccc
Confidence 5688999999999999999 9999999999999998764 0 111 0 1 489
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|++ +| .+.+|++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+
T Consensus 109 ~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 109 SRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred cEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 999999999995 55 699999999999999999986 5789999999999999999965 679999999999999999
Q ss_pred ccccccccccc
Q 003039 424 LSGTVPSSLLS 434 (854)
Q Consensus 424 l~g~~p~~l~~ 434 (854)
++ ..|.....
T Consensus 184 ~~-~~~~~~~~ 193 (263)
T 1xeu_A 184 CV-NEPVKYQP 193 (263)
T ss_dssp EE-CCCEECCS
T ss_pred cc-CCcccccc
Confidence 99 44655433
No 364
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.30 E-value=3e-12 Score=157.89 Aligned_cols=106 Identities=22% Similarity=0.231 Sum_probs=85.2
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
++|+.|+|++|.+++..|..+..+++|+.|+|++|++++.+|. |.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 5788888888888877788888888888888888888887774 788888888888888888777888888888888888
Q ss_pred ccccccccccccc--ccccccccccCccc
Q 003039 420 QNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 420 ~~N~l~g~~p~~l--~~~~~~l~~~~n~~ 446 (854)
++|++++..|..+ +.+++.|++++|..
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 374 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCS
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCC
Confidence 8888884444333 55667777777753
No 365
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.30 E-value=7e-12 Score=146.59 Aligned_cols=145 Identities=18% Similarity=0.144 Sum_probs=79.6
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
+++|+.|+|+.|.++.+|+ +.. .|+.|++++|.+..+.. .+..+..+...+ | ...+++. .+++|
T Consensus 99 l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~---N---~l~~lp~---~l~~L 162 (571)
T 3cvr_A 99 PASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTMLPE----LPALLEYINADN---N---QLTMLPE---LPTSL 162 (571)
T ss_dssp CTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSCCCC----CCTTCCEEECCS---S---CCSCCCC---CCTTC
T ss_pred cCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCCCCC----cCccccEEeCCC---C---ccCcCCC---cCCCc
Confidence 3567888888888888888 555 78888888887764111 112222221100 0 0111111 23456
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCc-------cEEEeCCCccCCCCCccccCCCCCce
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDL-------RIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L-------~~L~Ls~N~l~g~~P~~l~~l~~L~~ 416 (854)
+.|+|++|+|++ +|. |. ++|+.|+|++|+|+..++ +.. +| +.|+|++|+|+ .+|..+..+++|+.
T Consensus 163 ~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 163 EVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp CEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred CEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 666666666663 555 44 566666666666664333 333 44 66666666666 45665555666666
Q ss_pred eecccccccccccccc
Q 003039 417 LYVQNNMLSGTVPSSL 432 (854)
Q Consensus 417 l~l~~N~l~g~~p~~l 432 (854)
|+|++|+|+|.+|..+
T Consensus 235 L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 235 IILEDNPLSSRIRESL 250 (571)
T ss_dssp EECCSSSCCHHHHHHH
T ss_pred EEeeCCcCCCcCHHHH
Confidence 6666666665555554
No 366
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.29 E-value=5.2e-12 Score=144.95 Aligned_cols=104 Identities=24% Similarity=0.289 Sum_probs=67.2
Q ss_pred CCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
.+++|+.|+|++|++++ +++ +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++. ..+..+++|+.|+
T Consensus 285 ~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 285 GLTALTNLELNENQLED-ISP-ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 359 (466)
T ss_dssp TCTTCSEEECCSSCCSC-CGG-GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred CCCccCeEEcCCCcccC-chh-hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEe
Confidence 34566666666666664 332 6666777777777777766655 56667777777777777643 3566777777777
Q ss_pred ccccccccccccccccccccccccCcccc
Q 003039 419 VQNNMLSGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~g~~p~~l~~~~~~l~~~~n~~l 447 (854)
+++|++++..|..-+.++..|++++|+..
T Consensus 360 l~~n~l~~~~~~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 360 AGHNQISDLTPLANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCSSCCCBCGGGTTCTTCCEEECCCEEEE
T ss_pred CCCCccCccchhhcCCCCCEEeccCCccc
Confidence 77777776666444566666666666544
No 367
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.28 E-value=2.3e-13 Score=152.18 Aligned_cols=181 Identities=14% Similarity=0.133 Sum_probs=135.3
Q ss_pred cccceeeeecccCCCCC-----CCcccchhhhceeccCCCCCccHHHHHHHHhh-------------cCCCCccCCCCCC
Q 003039 263 SLPFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISL-------------YSSADWAQEGGDP 324 (854)
Q Consensus 263 ~l~~l~~l~l~~n~~s~-----lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l-------------~~~~~w~~~~~~p 324 (854)
.++.|+.|+|+.|.++. +|..+..+..|+.|++++|.+....+..+... ..++.+... -
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~---~ 168 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG---R 168 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC---S
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECC---C
Confidence 35788999999999998 77889999999999999999976655555543 566665331 1
Q ss_pred CCCCCCCeeE---eCCCCCCCeeEEEecCCCCC--c---cCCcccccCccCcEEeccCCCCC----CCCC-CCCCCCCcc
Q 003039 325 CLPVPWSWLQ---CNSDPQPSITVIHLSSKNLT--G---NIPSDLTKLSSLVELWLDGNSLT----GPIP-DFSGCPDLR 391 (854)
Q Consensus 325 c~~~~~~~~~---c~~~~~~~l~~L~L~~n~l~--g---~lp~~i~~l~~L~~L~L~~N~l~----~~~p-~~~~l~~L~ 391 (854)
|. ....++. -....+++|+.|+|++|+|+ | .+|..+.++++|+.|+|++|.|+ +.+| .+..+++|+
T Consensus 169 n~-l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 169 NR-LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp SC-CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred CC-CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 21 0001111 01123458999999999998 3 35558889999999999999995 4444 478899999
Q ss_pred EEEeCCCccCCC----CCccc--cCCCCCceeecccccccc----cccccc---ccccccccccCcccc
Q 003039 392 IIHLEDNQLTGP----LPSSL--MNLPNLRELYVQNNMLSG----TVPSSL---LSKNVVLNYAGNINL 447 (854)
Q Consensus 392 ~L~Ls~N~l~g~----~P~~l--~~l~~L~~l~l~~N~l~g----~~p~~l---~~~~~~l~~~~n~~l 447 (854)
.|+|++|+|++. +|..+ +.+++|+.|+|++|+|++ .+|..+ ++++..|++++|+..
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 999999999865 57777 348999999999999996 488877 577888999988643
No 368
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.27 E-value=1.1e-11 Score=141.86 Aligned_cols=159 Identities=18% Similarity=0.173 Sum_probs=97.2
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+|+.|.++.+| +..+..|+.|+++.|.+... .+..+..+..+... -|.. ...+ ....+++|
T Consensus 105 l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~---~n~~--~~~~--~~~~l~~L 172 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCH---LNKK--ITKL--DVTPQTQL 172 (457)
T ss_dssp CTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECT---TCSC--CCCC--CCTTCTTC
T ss_pred CCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECC---CCCc--cccc--ccccCCcC
Confidence 445666667777666664 66666677777766665542 12233333333111 1100 0001 12345677
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|++ +| +..+++|+.|+|++|+|++. .+..+++|+.|+|++|+|++ +| ++.+++|+.|++++|+
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 778888887774 55 77777788888888877775 37777778888888888875 66 7777778888888888
Q ss_pred cccccccccccccccccccC
Q 003039 424 LSGTVPSSLLSKNVVLNYAG 443 (854)
Q Consensus 424 l~g~~p~~l~~~~~~l~~~~ 443 (854)
|++ +|...+.++..|.+.+
T Consensus 245 l~~-~~~~~l~~L~~L~l~~ 263 (457)
T 3bz5_A 245 LTE-LDVSTLSKLTTLHCIQ 263 (457)
T ss_dssp CSC-CCCTTCTTCCEEECTT
T ss_pred CCC-cCHHHCCCCCEEeccC
Confidence 774 4444445444444433
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.27 E-value=6.7e-12 Score=144.01 Aligned_cols=167 Identities=22% Similarity=0.227 Sum_probs=105.6
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.|+.|+++.|.++.+++ +..+..|+.|++++|.+....+ +..+..+..+... -|. ...+. ....+++|
T Consensus 176 l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~---~n~---l~~~~-~l~~l~~L 245 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLN---GNQ---LKDIG-TLASLTNL 245 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG-GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECC---SSC---CCCCG-GGGGCTTC
T ss_pred CCCCCEEECcCCcCCCChh-hccCCCCCEEEecCCccccccc--ccccCCCCEEECC---CCC---cccch-hhhcCCCC
Confidence 4566777777777777643 6677777777777776654222 3334444444221 111 11111 11234577
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|++++..| +..+++|+.|+|++|++++.++ +..+++|+.|+|++|++++. |. ++.+++|+.|+|++|+
T Consensus 246 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 246 TDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECCSSC
T ss_pred CEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECcCCc
Confidence 777777777775433 7777777777777777777655 77777777777777777753 33 6777777777777777
Q ss_pred cccccccccccccccccccCcc
Q 003039 424 LSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 424 l~g~~p~~l~~~~~~l~~~~n~ 445 (854)
+++..|..-+.+++.|++++|.
T Consensus 321 l~~~~~~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 321 ISDISPVSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CSCCGGGGGCTTCCEEECCSSC
T ss_pred CCCchhhccCccCCEeECCCCc
Confidence 7766664456667777777764
No 370
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.27 E-value=4.9e-12 Score=125.07 Aligned_cols=129 Identities=16% Similarity=0.111 Sum_probs=83.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
...++.|+|+.|.++.+|........|+.|+++.|.+... . ....+++|
T Consensus 18 ~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~-----------~--------------------~l~~l~~L 66 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-----------D--------------------GFPLLRRL 66 (176)
T ss_dssp TTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE-----------C--------------------CCCCCSSC
T ss_pred cCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc-----------c--------------------ccccCCCC
Confidence 4567778888888887754333333677777777765530 0 01234467
Q ss_pred eEEEecCCCCCccCCcc-cccCccCcEEeccCCCCCCCCC--CCCCCCCccEEEeCCCccCCCCCcc----ccCCCCCce
Q 003039 344 TVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSS----LMNLPNLRE 416 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~-i~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~g~~P~~----l~~l~~L~~ 416 (854)
+.|+|++|+|++ +|+. +..+++|+.|+|++|+|+..++ .+..+++|+.|+|++|.++ .+|.. +..+++|+.
T Consensus 67 ~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 67 KTLLVNNNRICR-IGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CEEECCSSCCCE-ECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSE
T ss_pred CEEECCCCcccc-cCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccce
Confidence 777777777773 4433 3677777777777777765544 4666777777777777777 55653 777777777
Q ss_pred eeccccccc
Q 003039 417 LYVQNNMLS 425 (854)
Q Consensus 417 l~l~~N~l~ 425 (854)
|++++|.+.
T Consensus 145 Ld~~~n~~~ 153 (176)
T 1a9n_A 145 LDFQKVKLK 153 (176)
T ss_dssp ETTEECCHH
T ss_pred eCCCcCCHH
Confidence 777777665
No 371
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.26 E-value=8.4e-12 Score=145.91 Aligned_cols=154 Identities=17% Similarity=0.177 Sum_probs=90.9
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003039 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~ 344 (854)
++|+.|+|+.|.++.+| ..+..|+.|++++|.+..+.. +.. .+..+...+.. ..+++- .+++|+
T Consensus 80 ~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls~N~------l~~lp~---~l~~L~ 143 (571)
T 3cvr_A 80 PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVDNNQ------LTMLPE---LPALLE 143 (571)
T ss_dssp TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECCSSC------CSCCCC---CCTTCC
T ss_pred CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch--hhc--CCCEEECCCCc------CCCCCC---cCcccc
Confidence 45677777777777776 345667777777776654111 211 22222211100 111111 345677
Q ss_pred EEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCC-------cee
Q 003039 345 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL-------REL 417 (854)
Q Consensus 345 ~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L-------~~l 417 (854)
.|+|++|+|++ +|. .+++|+.|+|++|+|++.++ |. ++|+.|+|++|+|+ .+|. |.. +| +.|
T Consensus 144 ~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L 212 (571)
T 3cvr_A 144 YINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFF 212 (571)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEE
T ss_pred EEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEE
Confidence 77777777774 665 46677777777777777444 44 67777777777777 6666 554 56 777
Q ss_pred ecccccccccccccc--ccccccccccCccc
Q 003039 418 YVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 418 ~l~~N~l~g~~p~~l--~~~~~~l~~~~n~~ 446 (854)
+|++|+|+ .+|..+ +.++..|++++|+.
T Consensus 213 ~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 213 RCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp ECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred ecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 77777777 677665 44566677777754
No 372
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.25 E-value=5.8e-12 Score=148.11 Aligned_cols=144 Identities=15% Similarity=0.019 Sum_probs=81.8
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003039 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~ 347 (854)
+.++++.|.++.+|+.+. ..++.|+++.|.+......+ ...+++|+.|+
T Consensus 34 ~~l~ls~~~L~~ip~~~~--~~L~~L~Ls~N~i~~~~~~~-----------------------------~~~l~~L~~L~ 82 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDLP--PRTKALSLSQNSISELRMPD-----------------------------ISFLSELRVLR 82 (562)
T ss_dssp CEEECTTSCCCSCCTTSC--TTCCEEECCSSCCCCCCGGG-----------------------------TTTCTTCCEEE
T ss_pred cEEEcCCCCCccCCCCCC--CCcCEEECCCCCccccChhh-----------------------------hccCCCccEEE
Confidence 456667777777776553 56677777776655311000 12344566666
Q ss_pred ecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCC-CCCccccCCCCCceeecccccccc
Q 003039 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~l~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|++|+|++|+|+..++. .+++|++|+|++|+|++ .+|..|+++++|+.|+|++|++++
T Consensus 83 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 83 LSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 666666655566666666666666666666643333 56666666666666664 334566666666666666666653
Q ss_pred cccccccccc--ccccccCcc
Q 003039 427 TVPSSLLSKN--VVLNYAGNI 445 (854)
Q Consensus 427 ~~p~~l~~~~--~~l~~~~n~ 445 (854)
..-.-+..+ +.|++++|.
T Consensus 161 -~~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 161 -LDLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp -TTTGGGTTSCEEEEEEEESS
T ss_pred -CchhhhhhceeeEEEeeccc
Confidence 221112333 555555553
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.25 E-value=1.5e-11 Score=140.74 Aligned_cols=162 Identities=17% Similarity=0.072 Sum_probs=95.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
++.++.|+|+.|.++.+| .+..+..|+.|+++.|.+.... +..+..++.+... -|. ..++. ...+++|
T Consensus 41 l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls---~N~---l~~~~--~~~l~~L 108 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDMT-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACD---SNK---LTNLD--VTPLTKL 108 (457)
T ss_dssp HTTCCEEECCSSCCCCCT-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECC---SSC---CSCCC--CTTCTTC
T ss_pred cCCCCEEEccCCCcccCh-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECc---CCC---Cceee--cCCCCcC
Confidence 556677777777777774 5677777777777777766531 3334444443221 111 11221 3345667
Q ss_pred eEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccccc
Q 003039 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~ 423 (854)
+.|+|++|+|++ +| ++++++|+.|+|++|+|++. +++++++|++|+|++|+..+.+ .++.+++|+.|++++|+
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNK 181 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSC
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCc
Confidence 777777777774 44 66777777777777777664 2566666666666666554455 25566666666666666
Q ss_pred cccccccccccccccccccCcc
Q 003039 424 LSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 424 l~g~~p~~l~~~~~~l~~~~n~ 445 (854)
+++ +|-.-+.+++.|++++|.
T Consensus 182 l~~-l~l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 182 ITE-LDVSQNKLLNRLNCDTNN 202 (457)
T ss_dssp CCC-CCCTTCTTCCEEECCSSC
T ss_pred cce-eccccCCCCCEEECcCCc
Confidence 663 553334455555555553
No 374
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1e-11 Score=136.52 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=87.0
Q ss_pred EEEecCC-CCCccCCcccccCccCcEEeccC-CCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeeccc
Q 003039 345 VIHLSSK-NLTGNIPSDLTKLSSLVELWLDG-NSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 345 ~L~L~~n-~l~g~lp~~i~~l~~L~~L~L~~-N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~ 421 (854)
.++++++ +|+ .||. |..+++|+.|+|++ |+|++.++. |.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3567777 888 6888 99999999999996 999988875 88899999999999999988888899999999999999
Q ss_pred cccccccccccccc--cccccccCccccccCC
Q 003039 422 NMLSGTVPSSLLSK--NVVLNYAGNINLHEGG 451 (854)
Q Consensus 422 N~l~g~~p~~l~~~--~~~l~~~~n~~l~~~~ 451 (854)
|+|+ .+|..++.. +..|++.+|+..|.+.
T Consensus 90 N~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALE-SLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred Cccc-eeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999 667665433 7888889998888653
No 375
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.19 E-value=1.1e-10 Score=137.98 Aligned_cols=74 Identities=36% Similarity=0.420 Sum_probs=46.6
Q ss_pred ccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccccccccccc--cccccccccc
Q 003039 365 SSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYA 442 (854)
Q Consensus 365 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l--~~~~~~l~~~ 442 (854)
++|+.|+|++|+|++.+ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+ ++++..|+++
T Consensus 221 ~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 55666666666666533 34566667777777766 4555 4566667777777776 666655 4455666666
Q ss_pred Cccc
Q 003039 443 GNIN 446 (854)
Q Consensus 443 ~n~~ 446 (854)
+|+.
T Consensus 293 ~N~l 296 (622)
T 3g06_A 293 GNPL 296 (622)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 6653
No 376
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.18 E-value=2.1e-10 Score=135.73 Aligned_cols=53 Identities=32% Similarity=0.403 Sum_probs=39.1
Q ss_pred CCccEEEeCCCccCCCCCccccCCCCCceeeccccccccccccccccccccccccCccc
Q 003039 388 PDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 388 ~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~ 446 (854)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+.++..|++++|..
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L 273 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM-LPSGLLSLSVYRNQL 273 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC-CCTTCCEEECCSSCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc-ccccCcEEeCCCCCC
Confidence 667788888888874 66 45577888888888888 6777 566777788877743
No 377
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.16 E-value=1.5e-12 Score=142.27 Aligned_cols=176 Identities=15% Similarity=0.170 Sum_probs=100.0
Q ss_pred ccceeeeecccCCCCC--CCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~--lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~ 341 (854)
+++|+.|+|+.|.++. +|..+..+..|+.|+++.|.+....+..+.++..++.+.. .-|......++......++
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L---~~~~~l~~~~l~~~~~~~~ 168 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL---SGCSGFSEFALQTLLSSCS 168 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC---TTCBSCCHHHHHHHHHHCT
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC---CCCCCCCHHHHHHHHhcCC
Confidence 4566677777776654 5566677777777777777766666666666555555532 2221111001111111245
Q ss_pred CeeEEEecCC-CCCcc-CCcccccCc-cCcEEeccCC--CCC-CCCCC-CCCCCCccEEEeCCCc-cCCCCCccccCCCC
Q 003039 342 SITVIHLSSK-NLTGN-IPSDLTKLS-SLVELWLDGN--SLT-GPIPD-FSGCPDLRIIHLEDNQ-LTGPLPSSLMNLPN 413 (854)
Q Consensus 342 ~l~~L~L~~n-~l~g~-lp~~i~~l~-~L~~L~L~~N--~l~-~~~p~-~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l~~ 413 (854)
+|+.|+|++| ++++. ++..+..++ +|+.|+|++| .++ +.+|. +.++++|+.|+|++|. +++..+..+..+++
T Consensus 169 ~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~ 248 (336)
T 2ast_B 169 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 248 (336)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred CCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCC
Confidence 6777777777 66643 566666666 7777777776 343 23332 4556677777777776 55556666667777
Q ss_pred Cceeeccccccccccccc---c--ccccccccccCc
Q 003039 414 LRELYVQNNMLSGTVPSS---L--LSKNVVLNYAGN 444 (854)
Q Consensus 414 L~~l~l~~N~l~g~~p~~---l--~~~~~~l~~~~n 444 (854)
|+.|+|++|. +..|.. + +++++.|++.||
T Consensus 249 L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 249 LQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 7777777764 122221 2 445566666655
No 378
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.16 E-value=4.4e-11 Score=118.14 Aligned_cols=104 Identities=18% Similarity=0.150 Sum_probs=85.5
Q ss_pred CCCeeEEEecCCCCCccCCcccccCc-cCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 340 QPSITVIHLSSKNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g~lp~~i~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
+++|+.|+|++|+++ .+|. +..+. +|+.|+|++|+|++. +.+..+++|++|+|++|+|++..|..+..+++|+.|+
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 347999999999999 6664 66665 999999999999987 7889999999999999999954334458999999999
Q ss_pred cccccccccccc--cc--ccccccccccCcccc
Q 003039 419 VQNNMLSGTVPS--SL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~g~~p~--~l--~~~~~~l~~~~n~~l 447 (854)
|++|+|+ .+|. .+ ++++..|++++|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 9999997 7776 44 567788899998753
No 379
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.16 E-value=9.2e-12 Score=139.17 Aligned_cols=177 Identities=17% Similarity=0.150 Sum_probs=134.7
Q ss_pred ccceeeeecccCCCCCC----Cccc-------chhhhceeccCCCCCccH----HHHHHHHhhcCCCCccCCCCCCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSR----GPLL-------NAMEINKYLERNDGSIDG----VAIVSVISLYSSADWAQEGGDPCLPV 328 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~l----pP~i-------n~le~l~~L~l~~~~~~~----~~~~~l~~l~~~~~w~~~~~~pc~~~ 328 (854)
++.|+.|+|+.|.+..+ |+.+ ..+..|+.|+++.|.+.. ..+..+..+..++.+... -|.
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~---~n~-- 133 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLH---NNG-- 133 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECC---SSC--
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECc---CCC--
Confidence 56788999998766644 4444 567889999999999877 355567777777776432 221
Q ss_pred CCCeeE----e-CCCCC---------CCeeEEEecCCCCC-ccCC---cccccCccCcEEeccCCCCC--C---CCC-CC
Q 003039 329 PWSWLQ----C-NSDPQ---------PSITVIHLSSKNLT-GNIP---SDLTKLSSLVELWLDGNSLT--G---PIP-DF 384 (854)
Q Consensus 329 ~~~~~~----c-~~~~~---------~~l~~L~L~~n~l~-g~lp---~~i~~l~~L~~L~L~~N~l~--~---~~p-~~ 384 (854)
..... + ....+ ++|+.|+|++|+|+ +.+| ..+..+++|+.|+|++|+|+ | ..| .+
T Consensus 134 -l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l 212 (386)
T 2ca6_A 134 -LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGL 212 (386)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTG
T ss_pred -CCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHh
Confidence 11100 0 00011 68999999999998 5666 57888999999999999998 4 456 68
Q ss_pred CCCCCccEEEeCCCccC----CCCCccccCCCCCceeeccccccccc----ccccc----ccccccccccCccc
Q 003039 385 SGCPDLRIIHLEDNQLT----GPLPSSLMNLPNLRELYVQNNMLSGT----VPSSL----LSKNVVLNYAGNIN 446 (854)
Q Consensus 385 ~~l~~L~~L~Ls~N~l~----g~~P~~l~~l~~L~~l~l~~N~l~g~----~p~~l----~~~~~~l~~~~n~~ 446 (854)
..+++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|+|++. +|..+ ++++..|++++|..
T Consensus 213 ~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 213 AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp GGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred hcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcC
Confidence 89999999999999996 67899999999999999999999965 56655 56788899998853
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.14 E-value=1.6e-10 Score=132.01 Aligned_cols=138 Identities=27% Similarity=0.372 Sum_probs=92.6
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003039 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~ 344 (854)
++|+.|+|+.|.++.+| .+..+..|+.|+++.|++... .. ..++|+
T Consensus 131 ~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~l-----------p~----------------------~~~~L~ 176 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKKL-----------PD----------------------LPPSLE 176 (454)
T ss_dssp TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSCC-----------CC----------------------CCTTCC
T ss_pred CCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCccc-----------CC----------------------Cccccc
Confidence 45677777777777776 477777777777777765420 00 113677
Q ss_pred EEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceeecccccc
Q 003039 345 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 345 ~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l 424 (854)
.|+|++|++++ +| .+++|++|+.|+|++|++++.+. + .++|+.|+|++|+++ .+|. ++.+++|+.|++++|++
T Consensus 177 ~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-~--~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 177 FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-L--PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLL 249 (454)
T ss_dssp EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-C--CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCC
T ss_pred EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-C--cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcC
Confidence 77777777774 66 57777777777777777776332 2 247777777777777 6773 77777777777777777
Q ss_pred ccccccccccccccccccCcc
Q 003039 425 SGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 425 ~g~~p~~l~~~~~~l~~~~n~ 445 (854)
+ .+|.. ..+++.|++++|.
T Consensus 250 ~-~l~~~-~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 250 K-TLPDL-PPSLEALNVRDNY 268 (454)
T ss_dssp S-SCCSC-CTTCCEEECCSSC
T ss_pred C-ccccc-ccccCEEECCCCc
Confidence 7 45543 3566667776664
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.14 E-value=2e-12 Score=147.83 Aligned_cols=164 Identities=20% Similarity=0.144 Sum_probs=71.1
Q ss_pred cccccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhc-------------CCCCccCCCCCCCCC
Q 003039 261 NLSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLY-------------SSADWAQEGGDPCLP 327 (854)
Q Consensus 261 ~~~l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~-------------~~~~w~~~~~~pc~~ 327 (854)
++..++++.|+++.|.+..+|+.|..+..|+.|+++.|.+....+..+.++. .+..+.. .-|.
T Consensus 7 ~~~~~~L~~L~l~~n~l~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l---~~~~- 82 (454)
T 1jl5_A 7 NVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELEL---NNLG- 82 (454)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEEC---TTSC-
T ss_pred ccccccchhhhcccCchhhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEe---cCCc-
Confidence 4456778889999999999999999999999999987765432222222111 1122211 0110
Q ss_pred CCCCeeEeCCCCCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCcc
Q 003039 328 VPWSWLQCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSS 407 (854)
Q Consensus 328 ~~~~~~~c~~~~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~ 407 (854)
..+++ .-+++|+.|+|++|++++ +|+.+ ++|+.|+|++|++++... + .++|++|+|++|++++ +| .
T Consensus 83 --l~~lp---~~~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 83 --LSSLP---ELPPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp --CSCCC---SCCTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCSS-CC-C
T ss_pred --cccCC---CCcCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCCC-Cc-c
Confidence 11111 112467777777777774 66432 556666666666655321 1 1456666666666663 55 3
Q ss_pred ccCCCCCceeeccccccccccccccccccccccccCc
Q 003039 408 LMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGN 444 (854)
Q Consensus 408 l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n 444 (854)
++++++|+.|++++|+++ .+|... .+++.|++++|
T Consensus 149 ~~~l~~L~~L~l~~N~l~-~lp~~~-~~L~~L~L~~n 183 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLK-KLPDLP-PSLEFIAAGNN 183 (454)
T ss_dssp CTTCTTCCEEECCSSCCS-CCCCCC-TTCCEEECCSS
T ss_pred cCCCCCCCEEECCCCcCc-ccCCCc-ccccEEECcCC
Confidence 666666666666666666 354432 35555555555
No 382
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13 E-value=1.3e-10 Score=122.38 Aligned_cols=138 Identities=18% Similarity=0.107 Sum_probs=107.7
Q ss_pred hhccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CCceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 530 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
+...+|.|+.+.||+.... ++.+++|+...........+.+|+++++.+. |..+.++++++...+..++||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 3566788888999999865 7899999987532223446889999999884 6778889999998889999999999999
Q ss_pred HHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 003039 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------ 646 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------ 646 (854)
|.+.+.. ......++.+++++|+.||+..
T Consensus 97 l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 97 CSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp HHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred hhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 8775311 1123467889999999999810
Q ss_pred --------------CCceecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 647 --------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 647 --------------~~~ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
.+.++|+|+++.|||++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876666799999764
No 383
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.09 E-value=2.3e-11 Score=134.09 Aligned_cols=176 Identities=15% Similarity=0.141 Sum_probs=108.9
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCc-cHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSI-DGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 341 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~-~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~~~ 341 (854)
++++.|+|+.|.++.+|+. +.++..|+.|++++|++ +.+....+..+..+..+.....+ ....+.- ....++
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N-----~l~~l~~~~f~~l~ 104 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN-----NLLYINPEAFQNLP 104 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET-----TCCEECTTSBCCCT
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC-----cccccCchhhhhcc
Confidence 3567889999999999985 88999999999998885 32222223333222221000000 0111111 123455
Q ss_pred CeeEEEecCCCCCccCCc-------------------------ccccC-ccCcEEeccCCCCCCCCCCCCCCCCccEEEe
Q 003039 342 SITVIHLSSKNLTGNIPS-------------------------DLTKL-SSLVELWLDGNSLTGPIPDFSGCPDLRIIHL 395 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~-------------------------~i~~l-~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L 395 (854)
+|+.|++++|+|++..+. .+..+ ..|+.|+|++|+|+..++......+|+.|+|
T Consensus 105 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l 184 (350)
T 4ay9_X 105 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNL 184 (350)
T ss_dssp TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEEC
T ss_pred ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhh
Confidence 666666666666532222 22333 2467778888888777666666677888888
Q ss_pred CC-CccCCCCCc-cccCCCCCceeeccccccccccccccccccccccccCcccc
Q 003039 396 ED-NQLTGPLPS-SLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 396 s~-N~l~g~~P~-~l~~l~~L~~l~l~~N~l~g~~p~~l~~~~~~l~~~~n~~l 447 (854)
++ |+++ .+|. .|..+++|+.|+|++|+|+ .+|...+.++..|...++..+
T Consensus 185 ~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l 236 (350)
T 4ay9_X 185 SDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNL 236 (350)
T ss_dssp TTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTC
T ss_pred ccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCc
Confidence 75 5555 5664 5788888888888888888 788877777766666555443
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.09 E-value=1.3e-12 Score=131.95 Aligned_cols=123 Identities=17% Similarity=0.259 Sum_probs=103.3
Q ss_pred cCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEecCCCC
Q 003039 274 KTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNL 353 (854)
Q Consensus 274 ~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~L~~n~l 353 (854)
.+.++.+|..+..+..|+.|++++|.+... .. ...+++|+.|+|++|+|
T Consensus 34 ~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-----------~~--------------------~~~l~~L~~L~l~~n~l 82 (198)
T 1ds9_A 34 IPPIEKMDATLSTLKACKHLALSTNNIEKI-----------SS--------------------LSGMENLRILSLGRNLI 82 (198)
T ss_dssp CTTCCCCHHHHHHTTTCSEEECSEEEESCC-----------CC--------------------HHHHTTCCEEEEEEEEE
T ss_pred cCcHhhhhHHHhcCCCCCEEECCCCCCccc-----------cc--------------------cccCCCCCEEECCCCCc
Confidence 346777777899999999999999877640 00 01245899999999999
Q ss_pred CccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCC--ccccCCCCCceeecccccccccccc
Q 003039 354 TGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLP--SSLMNLPNLRELYVQNNMLSGTVPS 430 (854)
Q Consensus 354 ~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P--~~l~~l~~L~~l~l~~N~l~g~~p~ 430 (854)
+ .+|..+..+++|+.|+|++|+|++. |.+..+++|+.|+|++|+|++ +| ..+..+++|+.|++++|++++.+|.
T Consensus 83 ~-~l~~~~~~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 83 K-KIENLDAVADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp C-SCSSHHHHHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred c-cccchhhcCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9 8999999999999999999999985 578889999999999999994 44 4799999999999999999977775
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.08 E-value=1.1e-11 Score=135.46 Aligned_cols=176 Identities=14% Similarity=0.082 Sum_probs=138.1
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHH-HHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCCC
Q 003039 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~-~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~~~ 342 (854)
..++.|++..|.++..++.+..+..|+.|+++.|.+... .+..+..+..++.+... -|. ..... -....+++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~---~~~---l~~~~~~~l~~~~~ 143 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE---GLR---LSDPIVNTLAKNSN 143 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECT---TCB---CCHHHHHHHTTCTT
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCc---Ccc---cCHHHHHHHhcCCC
Confidence 567889999999999999999999999999999998765 45556667777776432 221 11111 01224679
Q ss_pred eeEEEecCC-CCCc-cCCcccccCccCcEEeccCC-CCCCC-CCC-CCCCC-CccEEEeCCC--ccC-CCCCccccCCCC
Q 003039 343 ITVIHLSSK-NLTG-NIPSDLTKLSSLVELWLDGN-SLTGP-IPD-FSGCP-DLRIIHLEDN--QLT-GPLPSSLMNLPN 413 (854)
Q Consensus 343 l~~L~L~~n-~l~g-~lp~~i~~l~~L~~L~L~~N-~l~~~-~p~-~~~l~-~L~~L~Ls~N--~l~-g~~P~~l~~l~~ 413 (854)
|+.|+|++| .+++ .+|..+.++++|+.|+|++| .+++. ++. +..++ +|++|+|++| .++ +.+|..+..+++
T Consensus 144 L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~ 223 (336)
T 2ast_B 144 LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 223 (336)
T ss_dssp CSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT
T ss_pred CCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCC
Confidence 999999999 7886 37888999999999999999 99864 444 67799 9999999999 555 567888889999
Q ss_pred Cceeeccccc-ccccccccc--ccccccccccCccc
Q 003039 414 LRELYVQNNM-LSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 414 L~~l~l~~N~-l~g~~p~~l--~~~~~~l~~~~n~~ 446 (854)
|+.|+|++|. +++..+..+ +++++.|++++|..
T Consensus 224 L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~ 259 (336)
T 2ast_B 224 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYD 259 (336)
T ss_dssp CSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTT
T ss_pred CCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCC
Confidence 9999999999 777777766 56788899998863
No 386
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.05 E-value=2.5e-10 Score=125.38 Aligned_cols=97 Identities=27% Similarity=0.285 Sum_probs=81.6
Q ss_pred CCeeEeCCC----------CCCCeeEEEecC-CCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCC
Q 003039 330 WSWLQCNSD----------PQPSITVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLED 397 (854)
Q Consensus 330 ~~~~~c~~~----------~~~~l~~L~L~~-n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~ 397 (854)
|..+.|+.. .+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+|. |.+|++|+.|+|++
T Consensus 10 ~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 455666543 345799999996 999977778899999999999999999999986 79999999999999
Q ss_pred CccCCCCCccccCCCCCceeeccccccccc
Q 003039 398 NQLTGPLPSSLMNLPNLRELYVQNNMLSGT 427 (854)
Q Consensus 398 N~l~g~~P~~l~~l~~L~~l~l~~N~l~g~ 427 (854)
|+|++..|..+..++ |+.|+|++|+|...
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999965445565555 99999999999843
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.00 E-value=1.6e-11 Score=135.94 Aligned_cols=175 Identities=17% Similarity=0.153 Sum_probs=118.7
Q ss_pred cceeeeecccCCCCCCCc-----ccchhh-hceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCee
Q 003039 265 PFVLSFKFGKTYDSSRGP-----LLNAME-INKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP-----~in~le-~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~w~~~~~~pc~~~~~~~~ 333 (854)
..++.|+|+.|.++..++ .+..+. .|+.|+++.|.+....+..+..+ ..++.+... -|. ....
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls---~n~---l~~~ 95 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLS---GNF---LSYK 95 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECC---SSC---GGGS
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECc---CCc---CChH
Confidence 347889999999999886 355565 79999999999887667777665 555555331 111 1111
Q ss_pred EeC-----CCCC-CCeeEEEecCCCCCccCCccccc-----CccCcEEeccCCCCCCCCC-----CCCCCC-CccEEEeC
Q 003039 334 QCN-----SDPQ-PSITVIHLSSKNLTGNIPSDLTK-----LSSLVELWLDGNSLTGPIP-----DFSGCP-DLRIIHLE 396 (854)
Q Consensus 334 ~c~-----~~~~-~~l~~L~L~~n~l~g~lp~~i~~-----l~~L~~L~L~~N~l~~~~p-----~~~~l~-~L~~L~Ls 396 (854)
.+. .... ++|+.|+|++|+|++..+..+.. .++|+.|+|++|+|++... .+..++ +|++|+|+
T Consensus 96 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls 175 (362)
T 3goz_A 96 SSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLR 175 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECT
T ss_pred HHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeec
Confidence 110 1112 57889999999988655555443 3689999999998885332 234554 88899999
Q ss_pred CCccCCCCCcccc----CC-CCCceeeccccccccc----ccccc---ccccccccccCcc
Q 003039 397 DNQLTGPLPSSLM----NL-PNLRELYVQNNMLSGT----VPSSL---LSKNVVLNYAGNI 445 (854)
Q Consensus 397 ~N~l~g~~P~~l~----~l-~~L~~l~l~~N~l~g~----~p~~l---~~~~~~l~~~~n~ 445 (854)
+|+|++..+..++ .+ ++|+.|+|++|+|++. ++..+ ..+++.|++++|.
T Consensus 176 ~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 176 GNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp TSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred CCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 9998876665444 44 5899999999988852 55554 2367888888885
No 388
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=6e-10 Score=116.63 Aligned_cols=130 Identities=19% Similarity=0.119 Sum_probs=97.6
Q ss_pred ccc-ccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc--eeeEeeeeeecCeEEEEEEeccCCCH
Q 003039 533 KIG-SGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 533 ~iG-~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn--Iv~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
.++ .|..+.||+....+|+.+++|+.... ....+..|+++++.+++.+ +.+++++...++..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55669999998777888999997643 2345788999999886544 45688888887889999999999887
Q ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 003039 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 646 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------- 646 (854)
. ... . ....++.++++.|+.||+..
T Consensus 103 ~--~~~-------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 103 L--SSH-------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp T--TSC-------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred C--cCc-------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 4 211 0 12256777888888888642
Q ss_pred ------------CCceecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 647 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 647 ------------~~~ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
...++|+|++|.||+++++..+.|+|||.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887667799999875
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.96 E-value=4.7e-11 Score=132.29 Aligned_cols=176 Identities=16% Similarity=0.131 Sum_probs=113.2
Q ss_pred cceeeeecccCCCCCCCcc-----cchh-hhceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCee
Q 003039 265 PFVLSFKFGKTYDSSRGPL-----LNAM-EINKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~lpP~-----in~l-e~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~w~~~~~~pc~~~~~~~~ 333 (854)
+.|+.|+|+.|.++..++. +..+ ..|+.|+++.|.+....+..+.+. ..++.+... -|. ....
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls---~N~---l~~~ 153 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLR---GND---LGIK 153 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECT---TSC---GGGS
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEcc---CCc---CCHH
Confidence 5678888888888877765 3333 778888888888877666666554 244444321 111 1110
Q ss_pred E----eC-CCCC-CCeeEEEecCCCCCccCCcccccC-----ccCcEEeccCCCCCCC-----CCCCCC-CCCccEEEeC
Q 003039 334 Q----CN-SDPQ-PSITVIHLSSKNLTGNIPSDLTKL-----SSLVELWLDGNSLTGP-----IPDFSG-CPDLRIIHLE 396 (854)
Q Consensus 334 ~----c~-~~~~-~~l~~L~L~~n~l~g~lp~~i~~l-----~~L~~L~L~~N~l~~~-----~p~~~~-l~~L~~L~Ls 396 (854)
. |. .... ++|+.|+|++|+|++..+..+..+ ++|+.|+|++|.|++. ...+.. .++|+.|+|+
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 0 00 0112 378888999988887666555543 6888999999988872 223444 4588889999
Q ss_pred CCccCCCCC----ccccCCCCCceeecccccccccccc-------cc--ccccccccccCccc
Q 003039 397 DNQLTGPLP----SSLMNLPNLRELYVQNNMLSGTVPS-------SL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 397 ~N~l~g~~P----~~l~~l~~L~~l~l~~N~l~g~~p~-------~l--~~~~~~l~~~~n~~ 446 (854)
+|+|++..+ ..+..+++|+.|+|++|.+++..+. .+ ++.+..|++++|..
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l 296 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBC
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcC
Confidence 998886444 3356778888999998886632222 12 34456778888863
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.88 E-value=7e-11 Score=134.90 Aligned_cols=136 Identities=18% Similarity=0.167 Sum_probs=64.4
Q ss_pred ceeeeecccCCCCC-----CCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCC
Q 003039 266 FVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 340 (854)
Q Consensus 266 ~l~~l~l~~n~~s~-----lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~ 340 (854)
.|+.|+|+.|.++. ++..+..+..|+.|+++.|.+....+..+.... ....
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~------------------------~~~~ 255 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGL------------------------LHPS 255 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH------------------------TSTT
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHH------------------------hcCC
Confidence 55666666666665 344455566666666666666554444443210 0012
Q ss_pred CCeeEEEecCCCCCcc----CCcccccCccCcEEeccCCCCCCCCCC-C-----CCCCCccEEEeCCCccCCC----CCc
Q 003039 341 PSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIPD-F-----SGCPDLRIIHLEDNQLTGP----LPS 406 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~----lp~~i~~l~~L~~L~L~~N~l~~~~p~-~-----~~l~~L~~L~Ls~N~l~g~----~P~ 406 (854)
++|+.|+|++|++++. ++..+.++++|+.|+|++|.+++..+. + ...++|+.|+|++|++++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 3455555555555532 444444455555555555554432111 1 1123444555555544432 333
Q ss_pred cccCCCCCceeeccccccc
Q 003039 407 SLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 407 ~l~~l~~L~~l~l~~N~l~ 425 (854)
.+..+++|+.|+|++|+++
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp HHHHCSSCCEEECCSSBCH
T ss_pred HHhhCCCccEEEccCCccc
Confidence 4444444444455444444
No 391
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.86 E-value=7.1e-10 Score=122.15 Aligned_cols=165 Identities=18% Similarity=0.129 Sum_probs=102.4
Q ss_pred eeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCC-CCCeeE
Q 003039 269 SFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDP-QPSITV 345 (854)
Q Consensus 269 ~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c-~~~~-~~~l~~ 345 (854)
.+.+..|.++.+||. +..+..|+.|++++|.+.......+..+..+..+...+ +. ....+.- .... ...++.
T Consensus 84 ~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~---~~--~i~~l~~~~f~~~~~~l~~ 158 (350)
T 4ay9_X 84 IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD---NI--NIHTIERNSFVGLSFESVI 158 (350)
T ss_dssp EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES---CT--TCCEECTTSSTTSBSSCEE
T ss_pred hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc---cc--ccccccccchhhcchhhhh
Confidence 345567888888765 67788888888887776542111111111111110000 00 0111111 0111 236899
Q ss_pred EEecCCCCCccCCcccccCccCcEEeccC-CCCCCCCCC-CCCCCCccEEEeCCCccCCCCCc-cccCCCCCceeecccc
Q 003039 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDG-NSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPS-SLMNLPNLRELYVQNN 422 (854)
Q Consensus 346 L~L~~n~l~g~lp~~i~~l~~L~~L~L~~-N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~-~l~~l~~L~~l~l~~N 422 (854)
|+|++|+|+ .+|+.+..+.+|+.|+|++ |.++.++++ |.++++|++|||++|+|+ .+|. .+.+|++|+.+++ +
T Consensus 159 L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~--~ 234 (350)
T 4ay9_X 159 LWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARST--Y 234 (350)
T ss_dssp EECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTC--T
T ss_pred hcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccC--C
Confidence 999999999 7888888899999999985 667766665 789999999999999999 6665 4555555544332 4
Q ss_pred ccccccccc-cccccccccccC
Q 003039 423 MLSGTVPSS-LLSKNVVLNYAG 443 (854)
Q Consensus 423 ~l~g~~p~~-l~~~~~~l~~~~ 443 (854)
+++ .+|.- -+.++..+.+..
T Consensus 235 ~l~-~lP~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 235 NLK-KLPTLEKLVALMEASLTY 255 (350)
T ss_dssp TCC-CCCCTTTCCSCCEEECSC
T ss_pred CcC-cCCCchhCcChhhCcCCC
Confidence 465 77752 255666666653
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.85 E-value=3.3e-10 Score=129.32 Aligned_cols=158 Identities=22% Similarity=0.199 Sum_probs=106.6
Q ss_pred ccceeeeecccCCCC-----CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCC
Q 003039 264 LPFVLSFKFGKTYDS-----SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD 338 (854)
Q Consensus 264 l~~l~~l~l~~n~~s-----~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~ 338 (854)
++.++.|+|+.|.++ .+|..+..+..|+.|++++|.+....+..+..... .
T Consensus 27 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~------------------------~ 82 (461)
T 1z7x_W 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ------------------------T 82 (461)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC------------------------S
T ss_pred cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh------------------------h
Confidence 345667777777766 44555666677777777777776655554433210 0
Q ss_pred CCCCeeEEEecCCCCCc----cCCcccccCccCcEEeccCCCCCCCCCC------CCCCCCccEEEeCCCccCCC----C
Q 003039 339 PQPSITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPIPD------FSGCPDLRIIHLEDNQLTGP----L 404 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g----~lp~~i~~l~~L~~L~L~~N~l~~~~p~------~~~l~~L~~L~Ls~N~l~g~----~ 404 (854)
..++|+.|+|++|+++. .+|..+.++++|+.|+|++|.+++..+. ...+++|++|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 01268888888888883 5678888888888888888888754331 23356788888888888863 3
Q ss_pred CccccCCCCCceeeccccccccccccccc-------cccccccccCcc
Q 003039 405 PSSLMNLPNLRELYVQNNMLSGTVPSSLL-------SKNVVLNYAGNI 445 (854)
Q Consensus 405 P~~l~~l~~L~~l~l~~N~l~g~~p~~l~-------~~~~~l~~~~n~ 445 (854)
+..+..+++|+.|+|++|++++..+..+. ..++.|++++|.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 210 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG 210 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSC
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCC
Confidence 56677778888888888888754444432 266777777763
No 393
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.83 E-value=5.1e-09 Score=115.59 Aligned_cols=140 Identities=16% Similarity=0.304 Sum_probs=104.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEc--cCC-cccHHHHHHHHHHHccCC--CCceeeEeeeeeec---CeEEEEEEe
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLT--SNS-YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEE---GRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~--~~~-~~~~~~~~~Ev~~L~~l~--HpnIv~l~g~~~~~---~~~~LV~E~ 603 (854)
+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46899999999999876 4678888765 322 123456888999999986 45678888888776 458999999
Q ss_pred ccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 003039 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------- 646 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------- 646 (854)
++|..+.+.. -..++...+..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 123 VSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred cCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9987774422 123566777889999999999999731
Q ss_pred ------------------CCceecCCCCCCCEEEcCCCc--EEEEeeecccc
Q 003039 647 ------------------VPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 678 (854)
Q Consensus 647 ------------------~~~ivHrDIkp~NILl~~~~~--vkl~DFGla~~ 678 (854)
.+.++|||+++.|||++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.81 E-value=9.9e-11 Score=117.95 Aligned_cols=105 Identities=27% Similarity=0.262 Sum_probs=85.3
Q ss_pred CCCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCCCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
.+++|+.|+|++|+|++ +| .+.++++|+.|+|++|+|+..++.+..+++|+.|+|++|+|++ +| .+..+++|+.|+
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 45689999999999995 88 8999999999999999998654445667899999999999995 66 688899999999
Q ss_pred cccccccccccc--cc--ccccccccccCccccc
Q 003039 419 VQNNMLSGTVPS--SL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 419 l~~N~l~g~~p~--~l--~~~~~~l~~~~n~~l~ 448 (854)
|++|+++ .+|. .+ +.++..|++++|+..+
T Consensus 122 l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 122 MSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp ESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCCCcCC-chhHHHHHhcCCCCCEEEecCCcccc
Confidence 9999998 4443 33 6677888888886543
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.76 E-value=3.9e-09 Score=113.77 Aligned_cols=186 Identities=21% Similarity=0.253 Sum_probs=119.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CCc--eeeEeeeeeecC---eEEEEEEecc
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRN--LVQFLGYCQEEG---RSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-Hpn--Iv~l~g~~~~~~---~~~LV~E~~~ 605 (854)
+.++.|....||+.. ..+++|+-... .....+.+|+++|+.+. +.. +.+.+......+ ..++|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458899999999863 56889986432 33567889999998873 322 344555443333 3478999999
Q ss_pred CCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 003039 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG---------------------------------------- 645 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------- 645 (854)
|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988765331 2345556667777888888888751
Q ss_pred ---------------CCCceecCCCCCCCEEEcC--CCcEEEEeeeccccccCCCCceeeccc--------------ccc
Q 003039 646 ---------------CVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGASHVSSIVR--------------GTV 694 (854)
Q Consensus 646 ---------------~~~~ivHrDIkp~NILl~~--~~~vkl~DFGla~~~~~~~~~~~~~~~--------------gt~ 694 (854)
..+.++|+|+++.||+++. ...+.|+||+.+...... ........ ...
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHc
Confidence 1146899999999999998 556889999988643221 11100000 000
Q ss_pred cccC-ccccccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003039 695 GYLD-PEYYISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 695 ~Y~a-PE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~ 732 (854)
+... |+.... .....+.|+++.++|++.+|+.+|..
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 1111 221111 11235899999999999999988743
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.67 E-value=1.6e-09 Score=120.20 Aligned_cols=156 Identities=15% Similarity=0.100 Sum_probs=73.0
Q ss_pred ccceeeeecccCCCCCCCcc-cchh-----hhceeccCCCCCccHHHHHHHHhh-cCCCCccCCCCCCCCCCCCCeeE--
Q 003039 264 LPFVLSFKFGKTYDSSRGPL-LNAM-----EINKYLERNDGSIDGVAIVSVISL-YSSADWAQEGGDPCLPVPWSWLQ-- 334 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~-in~l-----e~l~~L~l~~~~~~~~~~~~l~~l-~~~~~w~~~~~~pc~~~~~~~~~-- 334 (854)
++.++.|+|+.|.++..... |..+ ..|+.|+++.|.+....+..+... ..+..+... -|. .....
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls---~n~---l~~~~~~ 144 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQ---LNS---LGPEACK 144 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECC---SSC---CCHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcC---CCC---CCHHHHH
Confidence 34566677777766654332 2222 466677777777665444443322 111111110 000 00000
Q ss_pred --eC--CCCCCCeeEEEecCCCCCc----cCCcccccCccCcEEeccCCCCCCCC----C-CCCCCCCccEEEeCCCccC
Q 003039 335 --CN--SDPQPSITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPI----P-DFSGCPDLRIIHLEDNQLT 401 (854)
Q Consensus 335 --c~--~~~~~~l~~L~L~~n~l~g----~lp~~i~~l~~L~~L~L~~N~l~~~~----p-~~~~l~~L~~L~Ls~N~l~ 401 (854)
|. ....++|+.|+|++|+|+. .++..+..+++|++|+|++|+|+..- . .+..+++|+.|+|++|+|+
T Consensus 145 ~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 145 DLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred HHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 00 0012356666666666542 23334455556666666666655321 1 2344555666666666655
Q ss_pred C----CCCccccCCCCCceeeccccccc
Q 003039 402 G----PLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 402 g----~~P~~l~~l~~L~~l~l~~N~l~ 425 (854)
. .++..+...++|+.|+|++|+|+
T Consensus 225 ~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 225 DTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3 12333444455666666666655
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.65 E-value=3.5e-09 Score=117.57 Aligned_cols=140 Identities=16% Similarity=0.087 Sum_probs=98.8
Q ss_pred cceeeeecccCCCCCC--CcccchhhhceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCeeEeC-
Q 003039 265 PFVLSFKFGKTYDSSR--GPLLNAMEINKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWLQCN- 336 (854)
Q Consensus 265 ~~l~~l~l~~n~~s~l--pP~in~le~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~w~~~~~~pc~~~~~~~~~c~- 336 (854)
..|+.|+|+.|.++.. ..+..++..|+.|++++|.+....+..+... ..+..+.. .-|. ....+|.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~L---s~n~---l~~~~~~~ 174 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRL---SNNP---LTAAGVAV 174 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEEC---CSSC---CHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeC---CCCC---CChHHHHH
Confidence 4788999999998763 3446678889999999999988777777654 23454432 1121 1111110
Q ss_pred ----CCCCCCeeEEEecCCCCCcc----CCcccccCccCcEEeccCCCCCCCCC-----CCCCCCCccEEEeCCCccCCC
Q 003039 337 ----SDPQPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIP-----DFSGCPDLRIIHLEDNQLTGP 403 (854)
Q Consensus 337 ----~~~~~~l~~L~L~~n~l~g~----lp~~i~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~Ls~N~l~g~ 403 (854)
....++|+.|+|++|+|+.. ++..+..+++|+.|+|++|+|+.... .+..+++|++|+|++|.|+..
T Consensus 175 l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 175 LMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 02356899999999999852 46677888999999999999986322 245678999999999999854
Q ss_pred CCccccC
Q 003039 404 LPSSLMN 410 (854)
Q Consensus 404 ~P~~l~~ 410 (854)
-...|..
T Consensus 255 g~~~L~~ 261 (372)
T 3un9_A 255 GRQVLRD 261 (372)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=6e-08 Score=105.61 Aligned_cols=93 Identities=24% Similarity=0.365 Sum_probs=77.7
Q ss_pred CCCeeEEEecCCCCCccCCc-ccccCccCcEEeccCCCCCCCCCC-CCCCCCcc-EEEeCCCccCCCCCccccCCCCCce
Q 003039 340 QPSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR-IIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g~lp~-~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~-~L~Ls~N~l~g~~P~~l~~l~~L~~ 416 (854)
+++|+.|+|++|+++ .||+ .|.+|++|+.|+|++| ++...+. |.+|++|+ .|+|.+ +++..-+.+|.+|++|+.
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 468999999999999 5654 6889999999999998 7765554 89999999 999998 777444578999999999
Q ss_pred eecccccccccccccccccc
Q 003039 417 LYVQNNMLSGTVPSSLLSKN 436 (854)
Q Consensus 417 l~l~~N~l~g~~p~~l~~~~ 436 (854)
|++++|+++ .|+...+...
T Consensus 302 l~l~~n~i~-~I~~~aF~~~ 320 (329)
T 3sb4_A 302 VLATGDKIT-TLGDELFGNG 320 (329)
T ss_dssp EEECSSCCC-EECTTTTCTT
T ss_pred EEeCCCccC-ccchhhhcCC
Confidence 999999999 8887765443
No 399
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.53 E-value=9.1e-08 Score=94.04 Aligned_cols=107 Identities=18% Similarity=0.160 Sum_probs=69.4
Q ss_pred EEeeccCCCCCCCccCCCCCCCCccccCccccccccccccCCccccccccccCCCCCCCChHHHhhhcccccCCceEEee
Q 003039 119 SARINFGADSEAPVRYPDDPFDRIWESDSLKKANYLVDVAAGTEKVSTKLPIDLRSDELPPQKVMQTAVVGTNGSLTYRL 198 (854)
Q Consensus 119 ~~r~~~g~~~~~~iryp~D~~dR~W~~~~~~~~~~~~~~~~~~~~~st~~~i~~~~~~~pP~~v~qtA~t~~~~~l~~~~ 198 (854)
..|.|||+.. +. |..+|.|+++......... . ...+ .+.....+..|..|+|||=... .++.|..
T Consensus 7 ~~~INcGg~~---~~---d~~gr~w~~D~~~~~~g~~---~---~~~~--~~~~~~~~~~~~~lY~TaR~~~-~~~tY~f 71 (174)
T 2jwp_A 7 IWAVNAGGES---HV---DVHGIHYRKDPLEGRVGRA---S---DYGM--KLPILRSNPEDQVLYQTERYNE-DSFGYDI 71 (174)
T ss_dssp EEEEEETSSS---EE---ETTTEEECSSCSSTTCCCC---C---CCCT--TSCCSSSCHHHHHTTTCCCCCC-SCEEEEE
T ss_pred EEEEECCCCC---cc---CCCCCEEcCCcCcccCCcc---c---cccc--ceEecccCCCCchhhhhhccCC-CCeEEEE
Confidence 5699999843 22 6789999998532110100 0 0001 1111123456889999997643 4677777
Q ss_pred cCCCCCCcceEEEEeccccCCCCCCceEEEEEECCccccccccc
Q 003039 199 NLDGFPGFGWAVTYFAEIEDLDPDESRKFRLVLPGQPDVSKAIV 242 (854)
Q Consensus 199 ~~~~~~~~~y~~~yFae~~~~~~~~~R~F~v~~n~~~~~~~~~~ 242 (854)
+.+. +..+.+-|||+|+.. ...+.|+|||++||+...++..+
T Consensus 72 ~v~~-~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi 113 (174)
T 2jwp_A 72 PIKE-EGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDI 113 (174)
T ss_dssp ECCS-CEEEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECH
T ss_pred EeCC-CeEEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCH
Confidence 7653 345459999999974 46789999999999988776544
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=1.1e-07 Score=99.75 Aligned_cols=78 Identities=26% Similarity=0.363 Sum_probs=44.8
Q ss_pred CCCeeEEEecCCCCCc--cCCcccccCccCcEEeccCCCCCCC--CCCCCCCCCccEEEeCCCccCCCCCc-------cc
Q 003039 340 QPSITVIHLSSKNLTG--NIPSDLTKLSSLVELWLDGNSLTGP--IPDFSGCPDLRIIHLEDNQLTGPLPS-------SL 408 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g--~lp~~i~~l~~L~~L~L~~N~l~~~--~p~~~~l~~L~~L~Ls~N~l~g~~P~-------~l 408 (854)
+++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. +..+..+ +|+.|+|++|.|.+.+|. .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHHH
Confidence 3466666666666665 4455556666666666666666654 1122333 666666666666655552 24
Q ss_pred cCCCCCceee
Q 003039 409 MNLPNLRELY 418 (854)
Q Consensus 409 ~~l~~L~~l~ 418 (854)
..+++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 5556665543
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.36 E-value=2.3e-08 Score=117.81 Aligned_cols=105 Identities=18% Similarity=0.078 Sum_probs=55.8
Q ss_pred CCeeEEEec----CCCCCcc-----CCcccccCccCcEEeccCCC--CCCCCC-CCC-CCCCccEEEeCCCccCC-CCCc
Q 003039 341 PSITVIHLS----SKNLTGN-----IPSDLTKLSSLVELWLDGNS--LTGPIP-DFS-GCPDLRIIHLEDNQLTG-PLPS 406 (854)
Q Consensus 341 ~~l~~L~L~----~n~l~g~-----lp~~i~~l~~L~~L~L~~N~--l~~~~p-~~~-~l~~L~~L~Ls~N~l~g-~~P~ 406 (854)
++|+.|+|+ .|++++. ++..+.++++|+.|+|++|. +++... .+. .+++|+.|+|++|++++ .++.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 456666664 5556542 33335556666666665322 443222 222 25666666666666654 2344
Q ss_pred cccCCCCCceeecccccccccccccc---ccccccccccCcc
Q 003039 407 SLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNI 445 (854)
Q Consensus 407 ~l~~l~~L~~l~l~~N~l~g~~p~~l---~~~~~~l~~~~n~ 445 (854)
.+..+++|+.|+|++|+|++.....+ +++++.|++++|.
T Consensus 483 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 483 FSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 45566666666666666654322222 4455666666665
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.33 E-value=1e-07 Score=112.16 Aligned_cols=106 Identities=17% Similarity=0.126 Sum_probs=73.1
Q ss_pred CCCeeEEEecCCCCCccCCccccc-CccCcEEecc----CCCCCCCCC-----C-CCCCCCccEEEeCCC--ccCCCCCc
Q 003039 340 QPSITVIHLSSKNLTGNIPSDLTK-LSSLVELWLD----GNSLTGPIP-----D-FSGCPDLRIIHLEDN--QLTGPLPS 406 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g~lp~~i~~-l~~L~~L~L~----~N~l~~~~p-----~-~~~l~~L~~L~Ls~N--~l~g~~P~ 406 (854)
+++|+.|+|+.|++++..+..++. +++|+.|+|+ .|++++.+. . +.++++|+.|+|++| .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 467888888888888777777766 7888888885 677776432 2 455788888888743 36655555
Q ss_pred cccC-CCCCceeeccccccccc-ccccc--ccccccccccCcc
Q 003039 407 SLMN-LPNLRELYVQNNMLSGT-VPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 407 ~l~~-l~~L~~l~l~~N~l~g~-~p~~l--~~~~~~l~~~~n~ 445 (854)
.++. +++|+.|+|++|++++. ++..+ +++++.|++++|+
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 5543 77888888888888753 33222 4667778888775
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.32 E-value=2.3e-06 Score=91.26 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=59.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCC---ceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hp---nIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
+.||.|.++.||++...+|+.++||+...........+..|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 568999999999999988999999997544333456789999999999765 577777764 3689999999986
Q ss_pred H
Q 003039 609 L 609 (854)
Q Consensus 609 L 609 (854)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=1e-06 Score=95.83 Aligned_cols=79 Identities=18% Similarity=0.093 Sum_probs=58.1
Q ss_pred CccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCc-eeeccccccccccccccc---ccccc
Q 003039 364 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR-ELYVQNNMLSGTVPSSLL---SKNVV 438 (854)
Q Consensus 364 l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~-~l~l~~N~l~g~~p~~l~---~~~~~ 438 (854)
+++|+.|+|++|+++..++. |.+|++|+.|+|++| ++..-+.+|.++++|+ .|++.+ +++ .|+...+ .+++.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCE
Confidence 67888888888888876664 788888888888888 6634445788888888 888877 777 6766553 34566
Q ss_pred ccccCcc
Q 003039 439 LNYAGNI 445 (854)
Q Consensus 439 l~~~~n~ 445 (854)
+.+.+|.
T Consensus 302 l~l~~n~ 308 (329)
T 3sb4_A 302 VLATGDK 308 (329)
T ss_dssp EEECSSC
T ss_pred EEeCCCc
Confidence 6665553
No 405
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.29 E-value=1.8e-06 Score=93.50 Aligned_cols=131 Identities=16% Similarity=0.258 Sum_probs=93.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCC----CceeeEeeeeeecCeEEEEEEeccCC
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH----RNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~H----pnIv~l~g~~~~~~~~~LV~E~~~~g 607 (854)
+.++.|....||+. ++.+++|+.... .....+..|.++|+.+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 56899999999988 677888976422 223558899988888865 223444544 5668999999998
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCC----------------------------------------
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV---------------------------------------- 647 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~---------------------------------------- 647 (854)
++.+... ..++..++..++.++++.|+.||+...
T Consensus 113 ~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 113 RITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8764321 123444556667777777777774321
Q ss_pred --------------------CceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 648 --------------------PAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 648 --------------------~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
+.++|+|++|.|||++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999976679999998854
No 406
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.22 E-value=1.8e-07 Score=98.13 Aligned_cols=82 Identities=23% Similarity=0.371 Sum_probs=63.8
Q ss_pred EEecCCCCCccCCc----ccccCccCcEEeccCCCCCCC--CCC-CCCCCCccEEEeCCCccCCCCCccccCCC--CCce
Q 003039 346 IHLSSKNLTGNIPS----DLTKLSSLVELWLDGNSLTGP--IPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP--NLRE 416 (854)
Q Consensus 346 L~L~~n~l~g~lp~----~i~~l~~L~~L~L~~N~l~~~--~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~--~L~~ 416 (854)
++++.|+.. .++. ...+|++|+.|+|++|+|+++ +|. +..+++|+.|+|++|+|++. ..+..+. +|+.
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 566677543 3333 235689999999999999994 445 56799999999999999964 4455555 9999
Q ss_pred eecccccccccccc
Q 003039 417 LYVQNNMLSGTVPS 430 (854)
Q Consensus 417 l~l~~N~l~g~~p~ 430 (854)
|+|++|++++.+|.
T Consensus 225 L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 225 LWLDGNSLCDTFRD 238 (267)
T ss_dssp EECTTSTTGGGCSS
T ss_pred EEccCCcCccccCc
Confidence 99999999988873
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.18 E-value=8.4e-06 Score=85.63 Aligned_cols=134 Identities=17% Similarity=0.120 Sum_probs=94.1
Q ss_pred cccccCce-EEEEEEEC-CCcEEEEEEEccCCcccHHHHHHHHHHHccCC-CCceeeEeeeeeecCeEEEEEEeccCCCH
Q 003039 533 KIGSGGFG-VVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 533 ~iG~G~fg-~Vy~a~~~-~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-HpnIv~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
.+..|..| .||+.... ++..+++|+-... ....+..|...|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44556555 68987765 4667899986532 3456888999988874 33366788899989999999999999887
Q ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHHhC--------------------------------------------
Q 003039 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG-------------------------------------------- 645 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------------- 645 (854)
.+..... ......++.+++..|+.||+.
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6654211 112234555566666666641
Q ss_pred -----------CCCceecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 646 -----------CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 646 -----------~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
..+.++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01247999999999999988777899999875
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.17 E-value=6.1e-08 Score=114.16 Aligned_cols=180 Identities=15% Similarity=0.037 Sum_probs=104.1
Q ss_pred ccceeeeecccCCCCC--CCcccchhhhceeccCCCCCccHHHHHHHHh-hcCCCCccCCCC-----CCCCCCCCCeeEe
Q 003039 264 LPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVIS-LYSSADWAQEGG-----DPCLPVPWSWLQC 335 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~--lpP~in~le~l~~L~l~~~~~~~~~~~~l~~-l~~~~~w~~~~~-----~pc~~~~~~~~~c 335 (854)
+++|+.|+|+.|.++. ++..+..+..|+.|.+.+| +....+..+.. +..++.+..... ..|......++..
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 5678888888888554 2233567788888888877 44444554443 445555522110 1222111111110
Q ss_pred CCCCCCCeeEEEecCCCCCccCCcccc-cCccCcEEecc--C----CCCCCCCCC------CCCCCCccEEEeCCCccCC
Q 003039 336 NSDPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLD--G----NSLTGPIPD------FSGCPDLRIIHLEDNQLTG 402 (854)
Q Consensus 336 ~~~~~~~l~~L~L~~n~l~g~lp~~i~-~l~~L~~L~L~--~----N~l~~~~p~------~~~l~~L~~L~Ls~N~l~g 402 (854)
-...+++|+.|+++.|++++..+..+. .+++|+.|+|+ + |++++.+.+ +.++++|+.|+|++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 001245778887888888766555565 47788888887 4 556543221 34566777777766 5554
Q ss_pred CCCccccC-CCCCceeecccccccccccccc---ccccccccccCcc
Q 003039 403 PLPSSLMN-LPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNI 445 (854)
Q Consensus 403 ~~P~~l~~-l~~L~~l~l~~N~l~g~~p~~l---~~~~~~l~~~~n~ 445 (854)
..+..++. +++|+.|+|++|.+++..+..+ +++++.|++++|+
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~ 492 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCP 492 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCS
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCC
Confidence 44445554 6677777777777765544443 4566666666664
No 409
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.12 E-value=9.1e-06 Score=87.37 Aligned_cols=135 Identities=20% Similarity=0.245 Sum_probs=89.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCC---ceeeEeeeee-ecCeEEEEEEeccCC
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQ-EEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hp---nIv~l~g~~~-~~~~~~LV~E~~~~g 607 (854)
+.++.|....||+. +..+++|+-. .......+..|+++|+.+.+. .+.+.+.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888999987 5778888843 223356788999999998652 3556666664 445678999999998
Q ss_pred CHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 003039 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG------------------------------------------ 645 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------ 645 (854)
++.+.... .++...+..++.++++.|+.||+.
T Consensus 99 ~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 87653211 112222333333444444443331
Q ss_pred ---------------CCCceecCCCCCCCEEEcC---CCc-EEEEeeecccc
Q 003039 646 ---------------CVPAIIHRDLKSSNILLDK---HMR-AKVSDFGLSKF 678 (854)
Q Consensus 646 ---------------~~~~ivHrDIkp~NILl~~---~~~-vkl~DFGla~~ 678 (854)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2236799999999999997 455 48999998753
No 410
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.08 E-value=2e-05 Score=77.23 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=66.3
Q ss_pred CceeccCCCCCcceeeecccCCceeEEEEEeeecCcCCCCCCCeeEEEeCCcee-eeEEec---CCCCceEEEEEEE---
Q 003039 1 MTLRHFPADSRKYCYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHW-STIVIS---DAATIEVRELIFL--- 73 (854)
Q Consensus 1 ~tlr~fp~~~~~~cy~~~~~~~~~y~~r~~~~~g~~d~~~~~p~fd~~~~~~~w-~~v~~~---~~~~~~~~e~~~~--- 73 (854)
.|-|.||. +.+|.+|+.++|+|+||.-|.--.|.. ....+||++|+|..- .-.+.. ....+.+.|..+.
T Consensus 58 ~TaR~~~~---~~tY~f~v~~~G~Y~VrLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~ 133 (174)
T 2jwp_A 58 QTERYNED---SFGYDIPIKEEGEYVLVLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKK 133 (174)
T ss_dssp TCCCCCCS---CEEEEEECCSCEEEEEEEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEET
T ss_pred hhhccCCC---CeEEEEEeCCCeEEEEEEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEec
Confidence 37789884 579999999999999999997666654 456799999999532 222221 1222444444443
Q ss_pred ----------ecCCCceEEEecCCCCCcceeeeeeeec
Q 003039 74 ----------ASSPKIDVCLSNATTGQPFISTLELRQF 101 (854)
Q Consensus 74 ----------~~~~~~~vcl~~~~~~~pfis~le~~~l 101 (854)
..+..+.|.|.....+.|||++||+.+-
T Consensus 134 ~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 134 GKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMKG 171 (174)
T ss_dssp TEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEESS
T ss_pred CceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEEeC
Confidence 2345677777753356799999999863
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.03 E-value=6e-06 Score=90.64 Aligned_cols=79 Identities=4% Similarity=0.037 Sum_probs=54.8
Q ss_pred ccc-cccCceEEEEEEEC-------CCcEEEEEEEccCC---cccHHHHHHHHHHHccCC-C--CceeeEeeeeeec---
Q 003039 532 KKI-GSGGFGVVYYGKLK-------DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIH-H--RNLVQFLGYCQEE--- 594 (854)
Q Consensus 532 ~~i-G~G~fg~Vy~a~~~-------~~~~VAvK~l~~~~---~~~~~~~~~Ev~~L~~l~-H--pnIv~l~g~~~~~--- 594 (854)
+.| +.|....+|+.... +++.+++|+..... ......+..|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998764 26788899764322 111245778888888874 2 3466778877655
Q ss_pred CeEEEEEEeccCCCHH
Q 003039 595 GRSVLVYEFMHNGTLK 610 (854)
Q Consensus 595 ~~~~LV~E~~~~gsL~ 610 (854)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02 E-value=1.7e-05 Score=87.50 Aligned_cols=141 Identities=13% Similarity=0.185 Sum_probs=88.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc--eeeEeeeeeec-CeEEEEEEeccCCC
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEE-GRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn--Iv~l~g~~~~~-~~~~LV~E~~~~gs 608 (854)
+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4678899999999886 4788999987432 35888988888886433 45667666654 66899999999866
Q ss_pred HHhh------------------hccccccc-c------------cccHHHH---------------------HHHHHHHH
Q 003039 609 LKEH------------------LYGTLTHE-Q------------RINWIKR---------------------LEIAEDAA 636 (854)
Q Consensus 609 L~~~------------------L~~~~~~~-~------------~l~~~~~---------------------~~i~~~ia 636 (854)
+.+. |+...... . .-.|... ......+.
T Consensus 121 l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 200 (362)
T 3ovc_A 121 LQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALD 200 (362)
T ss_dssp TTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHH
Confidence 5421 11110000 0 0001100 01111222
Q ss_pred HHHHHHHhCC-CCceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 637 KGIEYLHTGC-VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 637 ~gL~yLH~~~-~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
..++++.... .+.++|+|+++.||+++.+..+.|+||+.+..
T Consensus 201 ~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 201 ELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2223332211 14789999999999998877788999998864
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.96 E-value=2e-06 Score=85.40 Aligned_cols=118 Identities=10% Similarity=0.093 Sum_probs=85.1
Q ss_pred ccchhhhceeccCCCC-CccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEecCCCCCcc----C
Q 003039 283 LLNAMEINKYLERNDG-SIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLTGN----I 357 (854)
Q Consensus 283 ~in~le~l~~L~l~~~-~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l~~L~L~~n~l~g~----l 357 (854)
.+.....|+.|+|+.| .+.......+..... ..++|+.|+|++|+|... +
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~-------------------------~~~~L~~L~Ls~n~i~~~g~~~l 85 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALK-------------------------TNTYVKKFSIVGTRSNDPVAFAL 85 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHT-------------------------TCCSCCEEECTTSCCCHHHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHH-------------------------hCCCcCEEECcCCCCChHHHHHH
Confidence 3455566888888888 888777776665421 113688999999998742 4
Q ss_pred CcccccCccCcEEeccCCCCCCC-----CCCCCCCCCccEEEe--CCCccCCC----CCccccCCCCCceeeccccccc
Q 003039 358 PSDLTKLSSLVELWLDGNSLTGP-----IPDFSGCPDLRIIHL--EDNQLTGP----LPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 358 p~~i~~l~~L~~L~L~~N~l~~~-----~p~~~~l~~L~~L~L--s~N~l~g~----~P~~l~~l~~L~~l~l~~N~l~ 425 (854)
...+...++|+.|+|++|.|... ...+...+.|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 86 ~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 86 AEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 44566668899999999998763 234667788999999 78888743 3455666688999999988876
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.88 E-value=2.1e-06 Score=94.58 Aligned_cols=153 Identities=15% Similarity=0.184 Sum_probs=90.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~~~~~~~l 343 (854)
.+.|+.|+|..+....+|+ +. +..|+.|.+..+.+....+..+... .+|+|
T Consensus 171 ~P~L~~L~L~g~~~l~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~---------------------------~lp~L 221 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLSIGK-KP-RPNLKSLEIISGGLPDSVVEDILGS---------------------------DLPNL 221 (362)
T ss_dssp CTTCCEEEEECCBTCBCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHS---------------------------BCTTC
T ss_pred CCCCcEEEEeCCCCceecc-cc-CCCCcEEEEecCCCChHHHHHHHHc---------------------------cCCCC
Confidence 3567777887765456666 33 6778888887777776665555421 23466
Q ss_pred eEEEecC--CCCCcc-----CCccc--ccCccCcEEeccCCCCCCCCC----CCCCCCCccEEEeCCCccCCC----CCc
Q 003039 344 TVIHLSS--KNLTGN-----IPSDL--TKLSSLVELWLDGNSLTGPIP----DFSGCPDLRIIHLEDNQLTGP----LPS 406 (854)
Q Consensus 344 ~~L~L~~--n~l~g~-----lp~~i--~~l~~L~~L~L~~N~l~~~~p----~~~~l~~L~~L~Ls~N~l~g~----~P~ 406 (854)
+.|+|+. |...|. +...+ ..+++|+.|+|++|.+....+ ....+++|+.|+|+.|+|++. ++.
T Consensus 222 ~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~ 301 (362)
T 2ra8_A 222 EKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLD 301 (362)
T ss_dssp CEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHT
T ss_pred cEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHh
Confidence 7776642 211111 11122 246788888888887764322 123467888888888888753 444
Q ss_pred cccCCCCCceeeccccccccccccccccc-cccccccCcc
Q 003039 407 SLMNLPNLRELYVQNNMLSGTVPSSLLSK-NVVLNYAGNI 445 (854)
Q Consensus 407 ~l~~l~~L~~l~l~~N~l~g~~p~~l~~~-~~~l~~~~n~ 445 (854)
.+..+++|+.|+|++|.|+...-..+... ...+++++|.
T Consensus 302 ~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 302 HVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp THHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred hcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 45567888888888888774332222221 2445555554
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.78 E-value=2.8e-06 Score=84.24 Aligned_cols=106 Identities=18% Similarity=0.259 Sum_probs=80.7
Q ss_pred CCCeeEEEecCC-CCCcc----CCcccccCccCcEEeccCCCCCCC----C-CCCCCCCCccEEEeCCCccCCC----CC
Q 003039 340 QPSITVIHLSSK-NLTGN----IPSDLTKLSSLVELWLDGNSLTGP----I-PDFSGCPDLRIIHLEDNQLTGP----LP 405 (854)
Q Consensus 340 ~~~l~~L~L~~n-~l~g~----lp~~i~~l~~L~~L~L~~N~l~~~----~-p~~~~l~~L~~L~Ls~N~l~g~----~P 405 (854)
.++|+.|+|++| +|... +...+...++|++|+|++|+|... + ..+...+.|++|+|++|+|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 358999999999 88742 455667789999999999999752 1 1255568899999999999843 56
Q ss_pred ccccCCCCCceeec--ccccccccccccc------ccccccccccCcc
Q 003039 406 SSLMNLPNLRELYV--QNNMLSGTVPSSL------LSKNVVLNYAGNI 445 (854)
Q Consensus 406 ~~l~~l~~L~~l~l--~~N~l~g~~p~~l------~~~~~~l~~~~n~ 445 (854)
..+...++|+.|+| ++|.|...--..+ ...+..|++++|.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 67888899999999 8899985432222 2456778887774
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.75 E-value=5.9e-06 Score=90.91 Aligned_cols=106 Identities=18% Similarity=0.308 Sum_probs=74.5
Q ss_pred CCCeeEEEecCCCCCccCCcccc--cCccCcEEeccC--CCCCCC--C----CCC--CCCCCccEEEeCCCccCCCCCcc
Q 003039 340 QPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDG--NSLTGP--I----PDF--SGCPDLRIIHLEDNQLTGPLPSS 407 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g~lp~~i~--~l~~L~~L~L~~--N~l~~~--~----p~~--~~l~~L~~L~Ls~N~l~g~~P~~ 407 (854)
+++|+.|+|..++++...-..+. .|++|+.|+|+. |...+. + +.+ ..+++|+.|+|++|++.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 45899999999888754444555 789999999863 332221 1 223 34889999999999988544444
Q ss_pred cc---CCCCCceeeccccccccc----ccccc--ccccccccccCcc
Q 003039 408 LM---NLPNLRELYVQNNMLSGT----VPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 408 l~---~l~~L~~l~l~~N~l~g~----~p~~l--~~~~~~l~~~~n~ 445 (854)
+. .+++|+.|+|+.|.|++. ++..+ +.++..|+++.|.
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 43 578999999999999864 33332 4567888887773
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.73 E-value=0.0001 Score=79.93 Aligned_cols=140 Identities=14% Similarity=0.216 Sum_probs=79.3
Q ss_pred cccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCC-----CCceeeEe-e--eeeecCeEEEEEEec
Q 003039 533 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----HRNLVQFL-G--YCQEEGRSVLVYEFM 604 (854)
Q Consensus 533 ~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~-----HpnIv~l~-g--~~~~~~~~~LV~E~~ 604 (854)
.|+.|..+.||+....+| .+++|+.... ...+..|+.+++.+. .|.++... | +....+..++||+|+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 455677889999987644 5899988642 234445566555553 24443311 1 123456789999999
Q ss_pred cCCCHH--------------hhhccccc----c-c-----ccccHHHH-------------------------------H
Q 003039 605 HNGTLK--------------EHLYGTLT----H-E-----QRINWIKR-------------------------------L 629 (854)
Q Consensus 605 ~~gsL~--------------~~L~~~~~----~-~-----~~l~~~~~-------------------------------~ 629 (854)
+|..+. ..+|.... . . ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121100 0 0 00112110 0
Q ss_pred HHHHHHHHHHHHHHh----------CCCCceecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 630 EIAEDAAKGIEYLHT----------GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 630 ~i~~~ia~gL~yLH~----------~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
.+...+..++++|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111234446667763 023489999999999999888899999999764
No 418
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.72 E-value=2.7e-06 Score=99.91 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=18.6
Q ss_pred CCCCccEEEeCCCccCCCCC-ccccCCCCCceeecccc
Q 003039 386 GCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELYVQNN 422 (854)
Q Consensus 386 ~l~~L~~L~Ls~N~l~g~~P-~~l~~l~~L~~l~l~~N 422 (854)
.+++|+.|+|++|.+++..+ ..+..+++|+.|++++|
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 34555555665555443221 12345555555555555
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.67 E-value=0.00011 Score=81.81 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=48.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEEccCCc-------ccHHHHHHHHHHHccCCC--Cc-eeeEeeeeeecCeEEEE
Q 003039 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------QGKREFTNEVTLLSRIHH--RN-LVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~-~~~~VAvK~l~~~~~-------~~~~~~~~Ev~~L~~l~H--pn-Iv~l~g~~~~~~~~~LV 600 (854)
+.||.|.++.||++... +++.++||....... .....+..|.++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 56899999999999764 468899998653211 123456778888887742 33 3355544 34456899
Q ss_pred EEeccCC
Q 003039 601 YEFMHNG 607 (854)
Q Consensus 601 ~E~~~~g 607 (854)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.65 E-value=0.00015 Score=76.86 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=54.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCC---CceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH---RNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~H---pnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
+.+|.|..+.||+.++.+|+.|.||+-..........|..|++.|+.+.. --+.+.+++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 56899999999999999999999998765544445678889998888742 1234445432 2478999998764
No 421
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.61 E-value=6.5e-05 Score=83.91 Aligned_cols=169 Identities=12% Similarity=0.042 Sum_probs=103.5
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCC
Q 003039 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPS 342 (854)
Q Consensus 264 l~~l~~l~l~~n~~s~lpP~in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~c~-~~~~~~ 342 (854)
..+|+.++|..|.++.+|+..-....|+.+.+.++ +..+...++.....+....... ....++-. ..+ .+
T Consensus 179 c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~-------~l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 179 CYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE-------NVSTIGQEAFRE-SG 249 (401)
T ss_dssp CTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT-------TCCEECTTTTTT-CC
T ss_pred cccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC-------CccCcccccccc-CC
Confidence 45677788888888888877444667777777643 3332233333333333331100 01111110 111 46
Q ss_pred eeEEEecCCCCCccCCcccccCccCcEEeccCCCCC-----CCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCce
Q 003039 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-----GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 343 l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~-----~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 416 (854)
|+.|.| .++++..-+..|.+|++|+.|+|.+|.+. ...+ .|.+|++|+.++|. |.++..-..+|.+|++|+.
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 888888 45566333557888899999999888876 2222 38888899999988 4477333457888888999
Q ss_pred eecccccccccccccccc--ccccccccCcc
Q 003039 417 LYVQNNMLSGTVPSSLLS--KNVVLNYAGNI 445 (854)
Q Consensus 417 l~l~~N~l~g~~p~~l~~--~~~~l~~~~n~ 445 (854)
|.|..| ++ .|+...+. ++..+.+.+|.
T Consensus 328 l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 328 LTIPAN-VT-QINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp EEECTT-CC-EECTTSSSSSCCCEEEECCSS
T ss_pred EEECcc-cc-EEcHHhCCCCCCCEEEEcCCC
Confidence 888544 66 66665533 45666777663
No 422
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00039 Score=74.68 Aligned_cols=138 Identities=20% Similarity=0.234 Sum_probs=90.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCC---CCceeeEeeeeeecCeEEEEEEeccCCC
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~---HpnIv~l~g~~~~~~~~~LV~E~~~~gs 608 (854)
+.|+.|....+|+.... +..+++|+.... ....+..|++.|+.+. ...+.+.++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 45889999999998864 778899987532 3566888999888884 3567788888887888999999999876
Q ss_pred HH--------h---hhccccc-c-----------------cccccHHHHH---HHH----------------HHHHHH-H
Q 003039 609 LK--------E---HLYGTLT-H-----------------EQRINWIKRL---EIA----------------EDAAKG-I 639 (854)
Q Consensus 609 L~--------~---~L~~~~~-~-----------------~~~l~~~~~~---~i~----------------~~ia~g-L 639 (854)
+. + .||.... . ...-+|.... ++. ..+... .
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 42 1 1222111 0 0011343221 111 111111 2
Q ss_pred HHHHh-CCCCceecCCCCCCCEEEcCCCcEEEEeee
Q 003039 640 EYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 640 ~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkl~DFG 674 (854)
..|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23421 2246899999999999999887 8899974
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00014 Score=81.70 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=48.2
Q ss_pred CceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCceeecccccccccCccccccC---cCCCcchhhhHHHHHHHHH
Q 003039 648 PAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ---QLTDKSDVYSFGVILLELI 724 (854)
Q Consensus 648 ~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~~DVwSlGvvl~ell 724 (854)
+.++|+|+++.|||++.++ ++|+||+.+...............-...|++|+..... ......++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876 99999998864321111100000012346666655321 1112345667888888887
Q ss_pred hCC
Q 003039 725 SGQ 727 (854)
Q Consensus 725 tG~ 727 (854)
++.
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 424
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.16 E-value=0.00043 Score=77.17 Aligned_cols=154 Identities=11% Similarity=0.022 Sum_probs=99.5
Q ss_pred ceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCCCe
Q 003039 266 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~l~~n~~s~lpP~-in~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~w~~~~~~pc~~~~~~~~~-c~~~~~~~l 343 (854)
+|+.+.|. +.++.+++. +..+..|+.+.+..+ +..+...++.. ..+..... |.....++ ....++++|
T Consensus 204 ~L~~l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-------p~~i~~I~~~aF~~c~~L 273 (401)
T 4fdw_A 204 GIEEVLLP-VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-------PNGVTNIASRAFYYCPEL 273 (401)
T ss_dssp CCSEEECC-TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-------ETTCCEECTTTTTTCTTC
T ss_pred ccCEEEeC-CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-------CCCccEEChhHhhCCCCC
Confidence 45566665 447777766 777778888888754 22111111111 11211110 00011111 123445689
Q ss_pred eEEEecCCCCC-----ccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCcee
Q 003039 344 TVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 344 ~~L~L~~n~l~-----g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l 417 (854)
+.|+|.+|.+. ..-+..|.+|++|+.|.|. |+++..... |.+|++|+.|+|..| ++..-+.+|.++ +|+.|
T Consensus 274 ~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 274 AEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp CEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred CEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 99999998875 2344578899999999999 457765554 899999999999666 663445689999 99999
Q ss_pred eccccccccccccccc
Q 003039 418 YVQNNMLSGTVPSSLL 433 (854)
Q Consensus 418 ~l~~N~l~g~~p~~l~ 433 (854)
++++|.+. .++...+
T Consensus 351 ~l~~n~~~-~l~~~~F 365 (401)
T 4fdw_A 351 KVEGTTPP-QVFEKVW 365 (401)
T ss_dssp EECCSSCC-BCCCSSC
T ss_pred EEcCCCCc-ccccccc
Confidence 99999887 5655543
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.01 E-value=0.00012 Score=71.33 Aligned_cols=85 Identities=12% Similarity=0.086 Sum_probs=65.2
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCC-CCC-CCCCCCCC----CCccEEEeCCCc-cCCCCCccccCCCC
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTG-PIPDFSGC----PDLRIIHLEDNQ-LTGPLPSSLMNLPN 413 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~-l~~-~~p~~~~l----~~L~~L~Ls~N~-l~g~~P~~l~~l~~ 413 (854)
.+|+.|||+++.++..--..|.+|++|+.|+|++|. |+. .+..++.+ ++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 379999999999885544567899999999999995 654 23335554 479999999975 77433346788999
Q ss_pred Cceeeccccc-cc
Q 003039 414 LRELYVQNNM-LS 425 (854)
Q Consensus 414 L~~l~l~~N~-l~ 425 (854)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999986 54
No 426
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.74 E-value=0.0034 Score=70.58 Aligned_cols=72 Identities=14% Similarity=0.316 Sum_probs=49.1
Q ss_pred ccccccCceEEEEEEECC--------CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCce-eeEeeeeeecCeEEEEEE
Q 003039 532 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~--------~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnI-v~l~g~~~~~~~~~LV~E 602 (854)
+.|+.|....+|+....+ ++.+++|+.... .....+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 457888889999998753 578999987432 112455678888888753333 566766542 38999
Q ss_pred eccCCCH
Q 003039 603 FMHNGTL 609 (854)
Q Consensus 603 ~~~~gsL 609 (854)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 427
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.73 E-value=0.008 Score=64.81 Aligned_cols=141 Identities=14% Similarity=0.134 Sum_probs=71.6
Q ss_pred cccccCceE-EEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCC--CceeeEeeeeeecCeEEEEEEeccCCCH
Q 003039 533 KIGSGGFGV-VYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 533 ~iG~G~fg~-Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~H--pnIv~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
.|+.|.... +|+....+++.+++|...... ...+..|+.+++.+.. -.+.+++.+....+ +++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455555444 667665446777777654321 1234556676666632 23455666544333 789999977666
Q ss_pred Hhhhcccc---------------------cc-ccccc-------------HHHH--H-----HHHHHHHHHHHHHH---h
Q 003039 610 KEHLYGTL---------------------TH-EQRIN-------------WIKR--L-----EIAEDAAKGIEYLH---T 644 (854)
Q Consensus 610 ~~~L~~~~---------------------~~-~~~l~-------------~~~~--~-----~i~~~ia~gL~yLH---~ 644 (854)
.+.+.... .. ...++ |... + .....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 54332110 00 00011 0000 0 00011122222221 1
Q ss_pred CCCCceecCCCCCCCEEEcCC----CcEEEEeeecccc
Q 003039 645 GCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKF 678 (854)
Q Consensus 645 ~~~~~ivHrDIkp~NILl~~~----~~vkl~DFGla~~ 678 (854)
.....++|||+.+.|||++.+ ..+.|+||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123489999999999999875 6899999998864
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.65 E-value=0.0027 Score=68.07 Aligned_cols=143 Identities=15% Similarity=0.198 Sum_probs=79.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc--eeeEeee------eeecCeEEEEEEe
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY------CQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn--Iv~l~g~------~~~~~~~~LV~E~ 603 (854)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+...+ +.+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3467788889999987655 6889988652 12345566777777664222 2233321 1224567899999
Q ss_pred ccCCCHHh--------------hhccc---cccc-----ccccHHHHHH------------HHHHHHHHHHHHHhC----
Q 003039 604 MHNGTLKE--------------HLYGT---LTHE-----QRINWIKRLE------------IAEDAAKGIEYLHTG---- 645 (854)
Q Consensus 604 ~~~gsL~~--------------~L~~~---~~~~-----~~l~~~~~~~------------i~~~ia~gL~yLH~~---- 645 (854)
++|..+.. .+|.. .... ....|..... +...+...++++++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865321 01211 0000 0012322110 111244455566532
Q ss_pred CCCceecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 646 CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 646 ~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
...+++|+|+++.|||++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12479999999999999987666899998764
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.63 E-value=0.0026 Score=58.74 Aligned_cols=36 Identities=33% Similarity=0.339 Sum_probs=18.6
Q ss_pred CccEEEeCCCccCCCCCccccCCCCCceeecccccc
Q 003039 389 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 389 ~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l~~N~l 424 (854)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555666665522223455555555555555544
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.60 E-value=0.0025 Score=58.96 Aligned_cols=56 Identities=32% Similarity=0.520 Sum_probs=47.6
Q ss_pred eEEEecCCCCC-ccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccC
Q 003039 344 TVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLT 401 (854)
Q Consensus 344 ~~L~L~~n~l~-g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~ 401 (854)
..++.++++|+ ..+|..|. .+|+.|+|++|+|+.++++ |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 37888999997 46776654 4799999999999998886 788999999999999876
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.58 E-value=0.0034 Score=66.75 Aligned_cols=70 Identities=11% Similarity=0.140 Sum_probs=42.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCce-eeEeeeeeecCeEEEEEEec-cCCCH
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFM-HNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnI-v~l~g~~~~~~~~~LV~E~~-~~gsL 609 (854)
+.|+.|....+|+. +.+++|+....... ......|+.+++.+...++ .++++++. +.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCccC
Confidence 56888999999998 56888887543211 1223467777776643222 35555443 3346899999 55444
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.50 E-value=0.012 Score=63.06 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=80.0
Q ss_pred cccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc--eeeEeee-----eeecCeEEEEEEecc
Q 003039 533 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY-----CQEEGRSVLVYEFMH 605 (854)
Q Consensus 533 ~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn--Iv~l~g~-----~~~~~~~~LV~E~~~ 605 (854)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789999877777789999986332 23456777888887774222 3334432 123456688999998
Q ss_pred CCCHHh-----------h---hccccc-----ccccccHHHH----HH---------------HHHHHHHHHHHHHhC--
Q 003039 606 NGTLKE-----------H---LYGTLT-----HEQRINWIKR----LE---------------IAEDAAKGIEYLHTG-- 645 (854)
Q Consensus 606 ~gsL~~-----------~---L~~~~~-----~~~~l~~~~~----~~---------------i~~~ia~gL~yLH~~-- 645 (854)
|..+.. . +|.... ....+++... .. +...+...++.+.+.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 754321 0 111100 0011111110 00 011111223333221
Q ss_pred --CCCceecCCCCCCCEEEcCCCcEEEEeeeccc
Q 003039 646 --CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 646 --~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~ 677 (854)
....++|+|+++.|||++ + .+.|+||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 224689999999999999 4 89999998775
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.49 E-value=0.0061 Score=67.11 Aligned_cols=141 Identities=16% Similarity=0.215 Sum_probs=80.0
Q ss_pred ccccccCceEEEEEEEC--------CCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc-eeeEeeeeeecCeEEEEEE
Q 003039 532 KKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~--------~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn-Iv~l~g~~~~~~~~~LV~E 602 (854)
+.|..|-...+|+.... +++.+++|+... .......+.+|.++++.+.-.+ ..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35667778889998874 247899998532 2233556678999888874222 3566666653 28999
Q ss_pred eccCCCHHhh-----------------hcccccc-cccc--cHHHHHHHHHHHH-------------------HHHHHH-
Q 003039 603 FMHNGTLKEH-----------------LYGTLTH-EQRI--NWIKRLEIAEDAA-------------------KGIEYL- 642 (854)
Q Consensus 603 ~~~~gsL~~~-----------------L~~~~~~-~~~l--~~~~~~~i~~~ia-------------------~gL~yL- 642 (854)
|++|.+|..- ||..... .... -|.+..++..++. ..+..|
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998655311 1111000 1111 1233333333321 122333
Q ss_pred ---HhC-CCCceecCCCCCCCEEEcCC----CcEEEEeeeccc
Q 003039 643 ---HTG-CVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSK 677 (854)
Q Consensus 643 ---H~~-~~~~ivHrDIkp~NILl~~~----~~vkl~DFGla~ 677 (854)
... ....++|+|+.+.||+++.+ +.+.|+||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 12378999999999999876 789999998774
No 434
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.0095 Score=67.36 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=47.3
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCce-eeEeeeeeecCeEEEEEEeccCCCH
Q 003039 532 KKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~-~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnI-v~l~g~~~~~~~~~LV~E~~~~gsL 609 (854)
+.|+.|-...+|+....+ +..+++|+..... ...-+...|..+++.+...++ .++++++. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 467888889999998875 4788899874332 111122578888888865444 46777663 2 259999987544
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.02 E-value=0.0088 Score=65.57 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=43.5
Q ss_pred ccccccCceEEEEEEECC---------CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc-eeeEeeeeeecCeEEEEE
Q 003039 532 KKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~---------~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn-Iv~l~g~~~~~~~~~LV~ 601 (854)
+.|+.|....+|+....+ ++.+++|+..... ....+...|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457788888999998764 2688888865432 11112457888887774333 33566544 2 26899
Q ss_pred EeccCCCH
Q 003039 602 EFMHNGTL 609 (854)
Q Consensus 602 E~~~~gsL 609 (854)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 436
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.72 E-value=0.045 Score=59.18 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=27.6
Q ss_pred CceecCCCCCCCEEEcCCCcEEEEeeecccc
Q 003039 648 PAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 648 ~~ivHrDIkp~NILl~~~~~vkl~DFGla~~ 678 (854)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987753
No 437
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.54 E-value=0.0028 Score=61.57 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=63.7
Q ss_pred cCCcccccCccCcEEeccCCCCCC-CCCCCCCCCCccEEEeCCCc-cCCCCCccccCC----CCCceeeccccc-ccccc
Q 003039 356 NIPSDLTKLSSLVELWLDGNSLTG-PIPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL----PNLRELYVQNNM-LSGTV 428 (854)
Q Consensus 356 ~lp~~i~~l~~L~~L~L~~N~l~~-~~p~~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l----~~L~~l~l~~N~-l~g~~ 428 (854)
.+|.....--+|+.|||+++.|+. .+..+.+|++|+.|+|+++. |+..--..|+.+ ++|+.|+|++|. +|..-
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 345433233479999999999875 34557899999999999995 774333446664 379999999985 77321
Q ss_pred cccc--ccccccccccCcccc
Q 003039 429 PSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 429 p~~l--~~~~~~l~~~~n~~l 447 (854)
=..+ +++++.|++++.+..
T Consensus 132 l~~L~~~~~L~~L~L~~c~~I 152 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLPGV 152 (176)
T ss_dssp HHHGGGCTTCCEEEEESCTTC
T ss_pred HHHHhcCCCCCEEECCCCCCC
Confidence 1112 567788888877654
No 438
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.05 E-value=0.074 Score=58.75 Aligned_cols=141 Identities=15% Similarity=0.225 Sum_probs=78.8
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEEccCCcc------------------cHHHHHHHHHHHccCCCCc-ee
Q 003039 533 KIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQ------------------GKREFTNEVTLLSRIHHRN-LV 585 (854)
Q Consensus 533 ~iG~G~fg~Vy~a~~~~--------~~~VAvK~l~~~~~~------------------~~~~~~~Ev~~L~~l~Hpn-Iv 585 (854)
.|..|-...+|+....+ .+.|.+++.-..... .......|..+++.+...+ ..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45567778999988763 367888886432210 0112234888888775333 45
Q ss_pred eEeeeeeecCeEEEEEEeccCCCHHhh-----------------hccc-cccccccc--HHHHHHHHHHHH---------
Q 003039 586 QFLGYCQEEGRSVLVYEFMHNGTLKEH-----------------LYGT-LTHEQRIN--WIKRLEIAEDAA--------- 636 (854)
Q Consensus 586 ~l~g~~~~~~~~~LV~E~~~~gsL~~~-----------------L~~~-~~~~~~l~--~~~~~~i~~~ia--------- 636 (854)
++++++..+ +|+||+++-+|... +|.. ..-..... |....++..++.
T Consensus 139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 677776432 89999987544211 1111 00011111 222222322211
Q ss_pred -------------HHH----HHHHhC-CCCceecCCCCCCCEEEcCC------CcEEEEeeeccc
Q 003039 637 -------------KGI----EYLHTG-CVPAIIHRDLKSSNILLDKH------MRAKVSDFGLSK 677 (854)
Q Consensus 637 -------------~gL----~yLH~~-~~~~ivHrDIkp~NILl~~~------~~vkl~DFGla~ 677 (854)
.-+ .+|... ....++|+|+.+.||+++.+ +.+.|+||..|.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 22368999999999999887 789999998764
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.97 E-value=0.0073 Score=59.82 Aligned_cols=82 Identities=11% Similarity=0.081 Sum_probs=41.5
Q ss_pred CeeEEEecCCCCCcc----CCcccccCccCcEEeccCCCCCCCC-----CCCCCCCCccEEEeCCCcc---CC----CCC
Q 003039 342 SITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPI-----PDFSGCPDLRIIHLEDNQL---TG----PLP 405 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~----lp~~i~~l~~L~~L~L~~N~l~~~~-----p~~~~l~~L~~L~Ls~N~l---~g----~~P 405 (854)
.|+.|+|++|+|... |...+..-+.|+.|+|++|.|...- ..+..-+.|+.|+|++|.. .. .+-
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia 150 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMM 150 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHH
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHH
Confidence 467777777777632 2223334466777777777765321 1233344566666665422 21 122
Q ss_pred ccccCCCCCceeeccccc
Q 003039 406 SSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 406 ~~l~~l~~L~~l~l~~N~ 423 (854)
..+..-+.|+.|+++.|.
T Consensus 151 ~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 151 MAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHCSSCCEEECCCCC
T ss_pred HHHHhCCCcCeEeccCCC
Confidence 333444555555555444
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.26 E-value=0.38 Score=47.98 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=65.8
Q ss_pred CCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCCEEEcCCCcEEEEeeeccccccCCCCce
Q 003039 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkl~DFGla~~~~~~~~~~ 686 (854)
-+|.+.|.. .+..+++.+++.++.|.+.+|.-+-.+.. . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 378888853 36789999999999999999877622100 1 1223346899999999888763 1110
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCc
Q 003039 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQE 728 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~ 728 (854)
.....+.|||... ...+.+.=|||+|+++|..+-=..
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 0123466888763 455678899999999999887433
No 441
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.23 E-value=0.079 Score=59.06 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=46.7
Q ss_pred ccccccCceEEEEEEECC--------CcEEEEEEEccCCcccHHHHHHHHHHHccCCCCc-eeeEeeeeeecCeEEEEEE
Q 003039 532 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~--------~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~Hpn-Iv~l~g~~~~~~~~~LV~E 602 (854)
+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+...+ ..++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456778888999998763 5789999864332 11223457888887774222 345555332 268999
Q ss_pred eccCCCH
Q 003039 603 FMHNGTL 609 (854)
Q Consensus 603 ~~~~gsL 609 (854)
|++|.+|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.54 E-value=0.014 Score=57.74 Aligned_cols=82 Identities=15% Similarity=0.271 Sum_probs=59.4
Q ss_pred CCeeEEEecCC-CCCc----cCCcccccCccCcEEeccCCCCCCCCC-C----CCCCCCccEEEeCCCccCCC----CCc
Q 003039 341 PSITVIHLSSK-NLTG----NIPSDLTKLSSLVELWLDGNSLTGPIP-D----FSGCPDLRIIHLEDNQLTGP----LPS 406 (854)
Q Consensus 341 ~~l~~L~L~~n-~l~g----~lp~~i~~l~~L~~L~L~~N~l~~~~p-~----~~~l~~L~~L~Ls~N~l~g~----~P~ 406 (854)
+.|+.|+|++| +|.. .|-..+..-+.|+.|+|++|+|...-- . +..-+.|+.|+|++|+|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 37999999986 7753 244456667899999999999974211 1 33457899999999998842 334
Q ss_pred cccCCCCCceeecccc
Q 003039 407 SLMNLPNLRELYVQNN 422 (854)
Q Consensus 407 ~l~~l~~L~~l~l~~N 422 (854)
.+..-+.|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 5556677999999865
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=92.88 E-value=0.17 Score=55.62 Aligned_cols=80 Identities=19% Similarity=0.156 Sum_probs=54.4
Q ss_pred CCCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCceee
Q 003039 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~ 418 (854)
..+|+.+.+.++ ++..-...|.++++|+.++|.++ ++.... .|.+|.+|+.++|..| ++..-..+|.++++|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 346778887654 66222346778888888888654 554444 3788888888888776 6623345788888888887
Q ss_pred cccc
Q 003039 419 VQNN 422 (854)
Q Consensus 419 l~~N 422 (854)
|..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 7544
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.10 E-value=0.29 Score=53.73 Aligned_cols=75 Identities=13% Similarity=0.290 Sum_probs=32.6
Q ss_pred CeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
.|+.+.+.++-.+ .-...+.++++|+.+.+. +.++..... |.+|.+|+.++|..| ++..-..+|.++.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 4455554433222 222344445555555553 233332222 455555555555433 33112234555555555555
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=91.08 E-value=0.37 Score=52.44 Aligned_cols=75 Identities=17% Similarity=0.327 Sum_probs=42.1
Q ss_pred CeeEEEecCCCCCccCC-cccccCccCcEEeccCCCCCCCCCC-CCCCCCccEEEeCCCccCCCCC-ccccCCCCCceee
Q 003039 342 SITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELY 418 (854)
Q Consensus 342 ~l~~L~L~~n~l~g~lp-~~i~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~g~~P-~~l~~l~~L~~l~ 418 (854)
+|+.+.+.++ ++ .++ ..|.++++|+.+.|.+|.++...+. |.+|.+|+.+.|..| ++ .|. .+|.++++|+.+.
T Consensus 264 ~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 264 ALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTIS 339 (379)
T ss_dssp TCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCC
T ss_pred hhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEE
Confidence 4555655432 44 233 3455666666666666666554443 666666666666544 44 333 3566666666665
Q ss_pred cc
Q 003039 419 VQ 420 (854)
Q Consensus 419 l~ 420 (854)
+.
T Consensus 340 ip 341 (379)
T 4h09_A 340 YP 341 (379)
T ss_dssp CC
T ss_pred EC
Confidence 54
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=90.68 E-value=0.52 Score=51.24 Aligned_cols=98 Identities=15% Similarity=0.209 Sum_probs=69.1
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
..|+.+.+..+ ++..-...+.++.+|+.+.+..+ +..... .|.++.+|+.+.|.+|.++..-..+|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 46888888765 66333456778899999999755 544443 3888999999999999888333458999999999998
Q ss_pred cccccccccccccc---ccccccccc
Q 003039 420 QNNMLSGTVPSSLL---SKNVVLNYA 442 (854)
Q Consensus 420 ~~N~l~g~~p~~l~---~~~~~l~~~ 442 (854)
..+ ++ .|....+ .+|..+.+.
T Consensus 318 p~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 318 PTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred Ccc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 654 66 6666553 334444443
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=89.94 E-value=0.57 Score=51.38 Aligned_cols=80 Identities=24% Similarity=0.405 Sum_probs=61.6
Q ss_pred CCeeEEEecCCCCCccCC-cccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCCCCC-ccccCCCCCcee
Q 003039 341 PSITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLREL 417 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp-~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P-~~l~~l~~L~~l 417 (854)
+.|+.+.+. ++++ .|+ ..|.++++|+.+.|..| ++..-. .|.+|.+|+.+.|..| ++ .|. .+|.++++|+.+
T Consensus 288 ~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 288 PALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNI 362 (394)
T ss_dssp TTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEE
T ss_pred cccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEE
Confidence 478888886 5666 454 46788999999999865 554444 3899999999999765 66 454 589999999999
Q ss_pred eccccccc
Q 003039 418 YVQNNMLS 425 (854)
Q Consensus 418 ~l~~N~l~ 425 (854)
++.+|...
T Consensus 363 ~~~~~~~~ 370 (394)
T 4gt6_A 363 EYSGSRSQ 370 (394)
T ss_dssp EESSCHHH
T ss_pred EECCceee
Confidence 99887643
No 448
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.02 E-value=0.78 Score=50.26 Aligned_cols=96 Identities=15% Similarity=0.086 Sum_probs=61.9
Q ss_pred CCeeEEEecCCCCCccCCcccccCccCcEEeccCCCCCCCCC-CCCCCCCccEEEeCCCccCCCCCccccCCCCCceeec
Q 003039 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~l~~L~L~~n~l~g~lp~~i~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~l~l 419 (854)
..++.+.+..+.+. ...+..+.+|+.+.+.+| ++.... .|.++.+|+.++|.++ ++..-..+|.++++|+.+.|
T Consensus 276 ~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 276 SGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred cccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 35666666554322 235677888888888765 554433 3788899999998754 66233457888899999988
Q ss_pred cccccccccccccc---cccccccccC
Q 003039 420 QNNMLSGTVPSSLL---SKNVVLNYAG 443 (854)
Q Consensus 420 ~~N~l~g~~p~~l~---~~~~~l~~~~ 443 (854)
..| ++ .|+...+ .+|+.+.+..
T Consensus 351 p~~-l~-~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 351 PLS-LR-KIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CTT-CC-EECTTTBTTCTTCCEEEEEG
T ss_pred Ccc-cc-EehHHHhhCCCCCCEEEECC
Confidence 766 66 6666553 3344444433
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=84.93 E-value=1.4 Score=48.47 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=24.4
Q ss_pred ceecCCCCCCCEEE------cCCCcEEEEeeeccc
Q 003039 649 AIIHRDLKSSNILL------DKHMRAKVSDFGLSK 677 (854)
Q Consensus 649 ~ivHrDIkp~NILl------~~~~~vkl~DFGla~ 677 (854)
.++|+|+.+.|||+ +++..++++||-.|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 46799999999999 445679999998875
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.55 E-value=4 Score=40.51 Aligned_cols=117 Identities=9% Similarity=0.121 Sum_probs=78.7
Q ss_pred CCCceeeEeeeeeecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCCCC
Q 003039 580 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 659 (854)
Q Consensus 580 ~HpnIv~l~g~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~N 659 (854)
.||+.+.. .+-...+...+.|+.-+.+ ..+ ..-..++...+++++.+|+....+++.. +|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f-----~~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNH--TPF-----DNIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTS--EEG-----GGGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCccc--CCH-----HHHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 67888865 4555566666666544322 111 2234567778899999999888777654 788899999
Q ss_pred EEEcCCCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003039 660 ILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 660 ILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~~ 732 (854)
|+++.++.+++.-.|+...+ +|. ..++..=.-.+=|++..+++++..|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999887764322 222 111122233567888999999988853
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.43 E-value=0.33 Score=54.70 Aligned_cols=59 Identities=5% Similarity=0.022 Sum_probs=17.3
Q ss_pred hccccccCceEEEEEEECC-CcEEEE------EEEccCC--cccHHHHHHHHHHHccCCCCceeeEeeeee
Q 003039 531 EKKIGSGGFGVVYYGKLKD-GKEIAV------KVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~a~~~~-~~~VAv------K~l~~~~--~~~~~~~~~Ev~~L~~l~HpnIv~l~g~~~ 592 (854)
.+.|| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45676 99999999874 367888 7655432 223346788899999999999999888764
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.63 E-value=7 Score=38.89 Aligned_cols=115 Identities=10% Similarity=0.115 Sum_probs=76.0
Q ss_pred CCCceeeEeeeeeecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHHHHHHH-HHHhCCCCceecCCCCCC
Q 003039 580 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIE-YLHTGCVPAIIHRDLKSS 658 (854)
Q Consensus 580 ~HpnIv~l~g~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDIkp~ 658 (854)
.||.. -..+-.+++...+.++--+++.=...+ ..++...+++++.+|+.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67877 344446667777777755443222222 34667788888888888776 66554 78889999
Q ss_pred CEEEcCCCcEEEEeeeccccccCCCCceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccc
Q 003039 659 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 731 (854)
Q Consensus 659 NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~~DVwSlGvvl~elltG~~pf~ 731 (854)
||+++.++.++|.-.|+-.. ++|.-+ ++.-=.-.+=|++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988776432 233221 111123356788888999988775
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=59.86 E-value=2.7 Score=30.33 Aligned_cols=25 Identities=32% Similarity=0.434 Sum_probs=9.8
Q ss_pred eeecchhh-HHHHHHHhhheeeeeec
Q 003039 459 IIIGSSVG-AAVLLLATVVSCLFMHK 483 (854)
Q Consensus 459 iii~~~vg-~~vl~l~~~~~~~~~~r 483 (854)
.|++.+++ +++++++.++.++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 34444444 34333333333333333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=53.72 E-value=2 Score=30.91 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=11.4
Q ss_pred ceeeecchhhHHHHHHHhhheeeeee
Q 003039 457 LNIIIGSSVGAAVLLLATVVSCLFMH 482 (854)
Q Consensus 457 ~~iii~~~vg~~vl~l~~~~~~~~~~ 482 (854)
...+++.++|+++++++.+...++++
T Consensus 11 ~~~Ia~~vVGvll~vi~~l~~~~~~R 36 (44)
T 2jwa_A 11 LTSIISAVVGILLVVVLGVVFGILIK 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhee
Confidence 33455566664433333333333333
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=49.95 E-value=3.6 Score=29.62 Aligned_cols=12 Identities=17% Similarity=0.495 Sum_probs=5.1
Q ss_pred eeecchhhHHHH
Q 003039 459 IIIGSSVGAAVL 470 (854)
Q Consensus 459 iii~~~vg~~vl 470 (854)
.+++.+++++++
T Consensus 11 aIA~gVVgGv~~ 22 (44)
T 2l2t_A 11 LIAAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred eEEEeehHHHHH
Confidence 344444443333
No 456
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=37.61 E-value=11 Score=22.55 Aligned_cols=16 Identities=31% Similarity=0.846 Sum_probs=13.9
Q ss_pred CCccCCCCCCCCcccc
Q 003039 130 APVRYPDDPFDRIWES 145 (854)
Q Consensus 130 ~~iryp~D~~dR~W~~ 145 (854)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 4679999999999985
No 457
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=35.78 E-value=13 Score=22.45 Aligned_cols=16 Identities=31% Similarity=0.846 Sum_probs=13.9
Q ss_pred CCccCCCCCCCCcccc
Q 003039 130 APVRYPDDPFDRIWES 145 (854)
Q Consensus 130 ~~iryp~D~~dR~W~~ 145 (854)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (27)
T 1nro_R 6 FLLRNPNDKYEPFWED 21 (27)
T ss_pred ccccCCCcccCccccc
Confidence 4679999999999986
No 458
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=26.84 E-value=3.5e+02 Score=24.34 Aligned_cols=88 Identities=13% Similarity=0.110 Sum_probs=54.6
Q ss_pred eeeecccCCceeEEEEEeeecCcCCCCCCCeeEEEeCCceeeeEEecC-CC---CceEEEEEEEecCCCceEEEec-CCC
Q 003039 14 CYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHWSTIVISD-AA---TIEVRELIFLASSPKIDVCLSN-ATT 88 (854)
Q Consensus 14 cy~~~~~~~~~y~~r~~~~~g~~d~~~~~p~fd~~~~~~~w~~v~~~~-~~---~~~~~e~~~~~~~~~~~vcl~~-~~~ 88 (854)
-|++.+.+.|.|.|+..|.=|.. ..-.++|+|+|+.-.+|.... .+ .....--|.+..+. -.+=|.. .+.
T Consensus 42 ~~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~-ntI~l~~~~~~ 116 (145)
T 2w3j_A 42 VWSLSAASAKTYTAQIRFGNGGT----SARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGT-NSIKLVAETAD 116 (145)
T ss_dssp EEEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEE-EEEEEEECSTT
T ss_pred EEEEECCCCeEEEEEEEEECCCC----CCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCc-eEEEEEEecCc
Confidence 57787777899999887753332 235789999998777776532 11 12221133333333 3444544 345
Q ss_pred CCcceeeeeeeecCCccc
Q 003039 89 GQPFISTLELRQFNGSVY 106 (854)
Q Consensus 89 ~~pfis~le~~~l~~~~y 106 (854)
|.|-|-.|+|.+.+....
T Consensus 117 g~~niD~i~v~~~~~~~~ 134 (145)
T 2w3j_A 117 GLANIDSIRVTGNGITPA 134 (145)
T ss_dssp CCCEEEEEEECSTTEEEC
T ss_pred CCEEEEEEEEEcCCCCCC
Confidence 779999999987665544
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=25.11 E-value=3.8e+02 Score=28.20 Aligned_cols=136 Identities=12% Similarity=0.119 Sum_probs=68.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEEccCCcccHHHHHHHHHHHccCCCCceeeEeee---------------------
Q 003039 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGY--------------------- 590 (854)
Q Consensus 532 ~~iG~G~fg~Vy~a~~~~~~~VAvK~l~~~~~~~~~~~~~Ev~~L~~l~HpnIv~l~g~--------------------- 590 (854)
+..-.|..| ||.+.. ++..++||-.. ....+.+..++...-.+.-|+..-+.-.
T Consensus 75 ~~s~~Gstg-vff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGTEG-LFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTTSC-EEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCCCC-eEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 334455544 554444 47889999431 2223334444444444555553222111
Q ss_pred -eeecCeEEEEEEeccCCCHHhhhcccccccccccHHHHHHHHHHH--HHHHHHHHhCCC-Ccee-cCCCCCCCEEEcCC
Q 003039 591 -CQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDA--AKGIEYLHTGCV-PAII-HRDLKSSNILLDKH 665 (854)
Q Consensus 591 -~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~i--a~gL~yLH~~~~-~~iv-HrDIkp~NILl~~~ 665 (854)
....+..+++|||.+|..|.+.-+... ...+... .+.++ .-++..+..+.. .+.+ +.--.++|||++.+
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~--~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSA--PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSH--HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHhhcccceehhhhcCCCccccchhhhh--hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 011235679999999766544321110 0112211 22222 334555555433 2222 22357899999876
Q ss_pred Cc-EEEEeeecccc
Q 003039 666 MR-AKVSDFGLSKF 678 (854)
Q Consensus 666 ~~-vkl~DFGla~~ 678 (854)
.. +.++|-+++..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 55 88899988753
No 460
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=23.02 E-value=17 Score=25.54 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=4.0
Q ss_pred ecchhhHHHHH
Q 003039 461 IGSSVGAAVLL 471 (854)
Q Consensus 461 i~~~vg~~vl~ 471 (854)
++.++++++++
T Consensus 16 ~~~vv~Gv~ll 26 (41)
T 2k9y_A 16 IGGVAVGVVLL 26 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EeehhHHHHHH
Confidence 33333333333
No 461
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.07 E-value=18 Score=25.12 Aligned_cols=10 Identities=20% Similarity=0.215 Sum_probs=4.3
Q ss_pred eeecchhhHH
Q 003039 459 IIIGSSVGAA 468 (854)
Q Consensus 459 iii~~~vg~~ 468 (854)
.+.+++++.+
T Consensus 12 aIAGiVvG~v 21 (38)
T 2k1k_A 12 EIVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHHH
T ss_pred ceeeeehHHH
Confidence 3444444443
Done!