AT3G02760 protein (Arabidopsis thaliana)

STRING 9.05

AT3G02760 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	AT3G02760	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding; ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding; FUNCTIONS IN- histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN- histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN- chloroplast, cytoplasm; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Histidyl-tRNA synthetase, class IIa, subgroup (InterPro-IPR015807), Aminoacyl-tRNA sy [...] (883 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	ATTRX3	ATTRX3 (THIOREDOXIN 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor [...] (118 aa)		•		0.851
	AT5G60960	pentatricopeptide (PPR) repeat-containing protein; pentatricopeptide (PPR) repeat-containing pr [...] (521 aa)	•			0.778
	AT3G58660	60S ribosomal protein-related; 60S ribosomal protein-related; FUNCTIONS IN- structural constitu [...] (446 aa)	•			0.752
	AT4G10320	isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putative; isoleucyl-tRNA synthet [...] (1190 aa)	•		•	0.726
	AT4G25730	FtsJ-like methyltransferase family protein; FtsJ-like methyltransferase family protein; FUNCTIO [...] (821 aa)	•			0.709
	SDN3	SDN3 (SMALL RNA DEGRADING NUCLEASE 3); exonuclease/ nucleic acid binding; SMALL RNA DEGRADING N [...] (782 aa)	•			0.708
	AT3G20810	transcription factor jumonji (jmjC) domain-containing protein; transcription factor jumonji (jm [...] (429 aa)			•	0.708
	AT5G26830	threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS); Encodes a dual-targeted threonyl-tRN [...] (709 aa)	•		•	0.707
	AT1G09620	ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding; ATP binding / ami [...] (1091 aa)	•		•	0.695
	AT1G06720	unknown protein; INVOLVED IN- ribosome biogenesis; LOCATED IN- nucleus; EXPRESSED IN- 21 plant [...] (1147 aa)	•			0.691

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: medium (41%)

Permalink